data_3K18 # _entry.id 3K18 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3K18 pdb_00003k18 10.2210/pdb3k18/pdb NDB NA0216 ? ? RCSB RCSB055417 ? ? WWPDB D_1000055417 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-10-06 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2018-01-24 4 'Structure model' 1 3 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' citation_author 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_citation_author.name' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3K18 _pdbx_database_status.recvd_initial_deposition_date 2009-09-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3FA1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sheng, J.' 1 'Hassan, A.E.A.' 2 'Zhang, W.' 3 'Huang, Z.' 4 # _citation.id primary _citation.title 'Synthesis and Structure Study of Oligonucleotides Derivatized with Tellurium Functionality' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sheng, J.' 1 ? primary 'Hassan, A.E.A.' 2 ? primary 'Zhang, W.' 3 ? primary 'Huang, Z.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*GP*(UMS)P*GP*(TTI)P*AP*CP*AP*C)-3'" 2619.151 1 ? ? ? '5-Te modification' 2 water nat water 18.015 28 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(DG)(UMS)(DG)(TTI)(DA)(DC)(DA)(DC)' _entity_poly.pdbx_seq_one_letter_code_can GUGUACAC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 UMS n 1 3 DG n 1 4 TTI n 1 5 DA n 1 6 DC n 1 7 DA n 1 8 DC n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 HOH non-polymer . WATER ? 'H2 O' 18.015 TTI 'DNA linking' n ;2'-deoxy-5-telluroxouridine 5'-(dihydrogen phosphate) ; "5-Tellurium-deoxyuridine-5'-phosphate" 'C9 H13 N2 O8 P Te' 435.782 UMS 'DNA linking' n "2'-METHYLSELENYL-2'-DEOXYURIDINE-5'-PHOSPHATE" ? 'C10 H15 N2 O8 P Se' 401.168 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG DG A . n A 1 2 UMS 2 2 2 UMS UMS A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 TTI 4 4 4 TTI TTI A . n A 1 5 DA 5 5 5 DA DA A . n A 1 6 DC 6 6 6 DC DC A . n A 1 7 DA 7 7 7 DA DA A . n A 1 8 DC 8 8 8 DC DC A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 11 11 HOH HOH A . B 2 HOH 2 12 12 HOH HOH A . B 2 HOH 3 13 13 HOH HOH A . B 2 HOH 4 14 14 HOH HOH A . B 2 HOH 5 15 15 HOH HOH A . B 2 HOH 6 16 16 HOH HOH A . B 2 HOH 7 17 17 HOH HOH A . B 2 HOH 8 18 18 HOH HOH A . B 2 HOH 9 19 19 HOH HOH A . B 2 HOH 10 20 20 HOH HOH A . B 2 HOH 11 21 21 HOH HOH A . B 2 HOH 12 22 22 HOH HOH A . B 2 HOH 13 23 23 HOH HOH A . B 2 HOH 14 24 24 HOH HOH A . B 2 HOH 15 25 25 HOH HOH A . B 2 HOH 16 26 26 HOH HOH A . B 2 HOH 17 27 27 HOH HOH A . B 2 HOH 18 28 28 HOH HOH A . B 2 HOH 19 29 29 HOH HOH A . B 2 HOH 20 30 30 HOH HOH A . B 2 HOH 21 31 31 HOH HOH A . B 2 HOH 22 32 32 HOH HOH A . B 2 HOH 23 33 33 HOH HOH A . B 2 HOH 24 34 34 HOH HOH A . B 2 HOH 25 35 35 HOH HOH A . B 2 HOH 26 36 36 HOH HOH A . B 2 HOH 27 37 37 HOH HOH A . B 2 HOH 28 38 38 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CBASS 'data collection' . ? 1 SHELXS phasing . ? 2 REFMAC refinement 5.2.0019 ? 3 d*TREK 'data reduction' . ? 4 d*TREK 'data scaling' . ? 5 # _cell.entry_id 3K18 _cell.length_a 42.695 _cell.length_b 42.695 _cell.length_c 24.213 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3K18 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3K18 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.11 _exptl_crystal.density_percent_sol 41.61 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6 _exptl_crystal_grow.pdbx_details 'MPD,sodium cacodylate,spermine tetra-HCl, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 99 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2008-04-12 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X12C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X12C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9795 # _reflns.entry_id 3K18 _reflns.observed_criterion_sigma_I 5.0 _reflns.observed_criterion_sigma_F 50 _reflns.d_resolution_low 18.89 _reflns.d_resolution_high 1.5 _reflns.number_obs 3659 _reflns.number_all 3878 _reflns.percent_possible_obs 94.4 _reflns.pdbx_Rmerge_I_obs 0.075 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15 _reflns.B_iso_Wilson_estimate 19.6 _reflns.pdbx_redundancy 8.63 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.50 _reflns_shell.d_res_low 1.55 _reflns_shell.percent_possible_all 74.9 _reflns_shell.Rmerge_I_obs 0.427 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.4 _reflns_shell.pdbx_redundancy 5.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 277 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3K18 _refine.ls_number_reflns_obs 3483 _refine.ls_number_reflns_all 3706 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 18.89 _refine.ls_d_res_high 1.50 _refine.ls_percent_reflns_obs 93.97 _refine.ls_R_factor_obs 0.20239 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20142 _refine.ls_R_factor_R_free 0.22323 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.5 _refine.ls_number_reflns_R_free 165 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.961 _refine.correlation_coeff_Fo_to_Fc_free 0.948 _refine.B_iso_mean 19.275 _refine.aniso_B[1][1] 0.07 _refine.aniso_B[2][2] 0.07 _refine.aniso_B[3][3] -0.14 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SIRAS _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.083 _refine.pdbx_overall_ESU_R_Free 0.081 _refine.overall_SU_ML 0.053 _refine.overall_SU_B 2.967 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3K18 _refine_analyze.Luzzati_coordinate_error_obs 0.083 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free 0.081 _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 162 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 28 _refine_hist.number_atoms_total 190 _refine_hist.d_res_high 1.50 _refine_hist.d_res_low 18.89 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.011 0.021 ? 181 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.841 3.000 ? 277 'X-RAY DIFFRACTION' ? r_chiral_restr 0.078 0.200 ? 32 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.011 0.020 ? 83 'X-RAY DIFFRACTION' ? r_nbd_refined 0.144 0.200 ? 52 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.270 0.200 ? 105 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.166 0.200 ? 11 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.173 0.200 ? 22 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.144 0.200 ? 13 'X-RAY DIFFRACTION' ? r_scbond_it 1.259 3.000 ? 262 'X-RAY DIFFRACTION' ? r_scangle_it 1.662 4.500 ? 277 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.500 _refine_ls_shell.d_res_low 1.539 _refine_ls_shell.number_reflns_R_work 201 _refine_ls_shell.R_factor_R_work 0.292 _refine_ls_shell.percent_reflns_obs 72.79 _refine_ls_shell.R_factor_R_free 0.381 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 5 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3K18 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3K18 _struct.title 'Tellurium modified DNA-8mer' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3K18 _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'DNA Tellurium, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3K18 _struct_ref.pdbx_db_accession 3K18 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code GUGUACAC _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3K18 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 8 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 3K18 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 8 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1930 ? 1 MORE 7 ? 1 'SSA (A^2)' 2920 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_556 y,x,-z+1 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 24.2130000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DG 1 "O3'" ? ? ? 1_555 A UMS 2 P ? ? A DG 1 A UMS 2 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale2 covale both ? A UMS 2 "O3'" ? ? ? 1_555 A DG 3 P ? ? A UMS 2 A DG 3 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale3 covale both ? A DG 3 "O3'" ? ? ? 1_555 A TTI 4 P ? ? A DG 3 A TTI 4 1_555 ? ? ? ? ? ? ? 1.600 ? ? covale4 covale both ? A TTI 4 "O3'" ? ? ? 1_555 A DA 5 P ? ? A TTI 4 A DA 5 1_555 ? ? ? ? ? ? ? 1.608 ? ? metalc1 metalc ? ? A TTI 4 TE5 ? ? ? 1_555 B HOH . O ? ? A TTI 4 A HOH 38 1_555 ? ? ? ? ? ? ? 2.374 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 A DC 8 N3 ? ? A DG 1 A DC 8 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DC 8 O2 ? ? A DG 1 A DC 8 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 A DC 8 N4 ? ? A DG 1 A DC 8 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A UMS 2 N3 ? ? ? 1_555 A DA 7 N1 ? ? A UMS 2 A DA 7 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A UMS 2 O4 ? ? ? 1_555 A DA 7 N6 ? ? A UMS 2 A DA 7 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DC 6 N3 ? ? A DG 3 A DC 6 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DC 6 O2 ? ? A DG 3 A DC 6 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DC 6 N4 ? ? A DG 3 A DC 6 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A TTI 4 N3 ? ? ? 1_555 A DA 5 N1 ? ? A TTI 4 A DA 5 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A TTI 4 O4 ? ? ? 1_555 A DA 5 N6 ? ? A TTI 4 A DA 5 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 5 N1 ? ? ? 1_555 A TTI 4 N3 ? ? A DA 5 A TTI 4 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 5 N6 ? ? ? 1_555 A TTI 4 O4 ? ? A DA 5 A TTI 4 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 6 N3 ? ? ? 1_555 A DG 3 N1 ? ? A DC 6 A DG 3 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 N4 ? ? ? 1_555 A DG 3 O6 ? ? A DC 6 A DG 3 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 O2 ? ? ? 1_555 A DG 3 N2 ? ? A DC 6 A DG 3 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 7 N1 ? ? ? 1_555 A UMS 2 N3 ? ? A DA 7 A UMS 2 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 7 N6 ? ? ? 1_555 A UMS 2 O4 ? ? A DA 7 A UMS 2 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 8 N3 ? ? ? 1_555 A DG 1 N1 ? ? A DC 8 A DG 1 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 8 N4 ? ? ? 1_555 A DG 1 O6 ? ? A DC 8 A DG 1 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 8 O2 ? ? ? 1_555 A DG 1 N2 ? ? A DC 8 A DG 1 7_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id O _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id B _pdbx_struct_conn_angle.ptnr1_label_comp_id HOH _pdbx_struct_conn_angle.ptnr1_label_seq_id . _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id A _pdbx_struct_conn_angle.ptnr1_auth_comp_id HOH _pdbx_struct_conn_angle.ptnr1_auth_seq_id 38 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id TE5 _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id A _pdbx_struct_conn_angle.ptnr2_label_comp_id TTI _pdbx_struct_conn_angle.ptnr2_label_seq_id 4 _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id A _pdbx_struct_conn_angle.ptnr2_auth_comp_id TTI _pdbx_struct_conn_angle.ptnr2_auth_seq_id 4 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id C5 _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id A _pdbx_struct_conn_angle.ptnr3_label_comp_id TTI _pdbx_struct_conn_angle.ptnr3_label_seq_id 4 _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id A _pdbx_struct_conn_angle.ptnr3_auth_comp_id TTI _pdbx_struct_conn_angle.ptnr3_auth_seq_id 4 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 173.4 _pdbx_struct_conn_angle.value_esd ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "C4'" _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 DG _pdbx_validate_rmsd_angle.auth_seq_id_1 3 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C3'" _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 DG _pdbx_validate_rmsd_angle.auth_seq_id_2 3 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 "C2'" _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 DG _pdbx_validate_rmsd_angle.auth_seq_id_3 3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 97.69 _pdbx_validate_rmsd_angle.angle_target_value 102.20 _pdbx_validate_rmsd_angle.angle_deviation -4.51 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.70 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A UMS 2 A UMS 2 ? DU ? 2 A TTI 4 A TTI 4 ? DU ? # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 33.5819 _pdbx_refine_tls.origin_y 32.6170 _pdbx_refine_tls.origin_z 9.7513 _pdbx_refine_tls.T[1][1] -0.0012 _pdbx_refine_tls.T[2][2] 0.0203 _pdbx_refine_tls.T[3][3] 0.0417 _pdbx_refine_tls.T[1][2] 0.0057 _pdbx_refine_tls.T[1][3] -0.0151 _pdbx_refine_tls.T[2][3] 0.0180 _pdbx_refine_tls.L[1][1] 0.5401 _pdbx_refine_tls.L[2][2] 0.1088 _pdbx_refine_tls.L[3][3] 0.5416 _pdbx_refine_tls.L[1][2] -0.0107 _pdbx_refine_tls.L[1][3] 0.0070 _pdbx_refine_tls.L[2][3] 0.2424 _pdbx_refine_tls.S[1][1] 0.0580 _pdbx_refine_tls.S[1][2] 0.2698 _pdbx_refine_tls.S[1][3] 0.0038 _pdbx_refine_tls.S[2][1] 0.0296 _pdbx_refine_tls.S[2][2] -0.0211 _pdbx_refine_tls.S[2][3] 0.0193 _pdbx_refine_tls.S[3][1] -0.0299 _pdbx_refine_tls.S[3][2] 0.0566 _pdbx_refine_tls.S[3][3] -0.0369 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 8 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 HOH O O N N 108 HOH H1 H N N 109 HOH H2 H N N 110 TTI O3P O N N 111 TTI N1 N N N 112 TTI C2 C N N 113 TTI O2 O N N 114 TTI N3 N N N 115 TTI C4 C N N 116 TTI O4 O N N 117 TTI C5 C N N 118 TTI C6 C N N 119 TTI "C1'" C N R 120 TTI "C2'" C N N 121 TTI "C3'" C N S 122 TTI "O3'" O N N 123 TTI "C4'" C N R 124 TTI "O4'" O N N 125 TTI "C5'" C N N 126 TTI "O5'" O N N 127 TTI P P N N 128 TTI O1P O N N 129 TTI O2P O N N 130 TTI TE5 TE N N 131 TTI HO3P H N N 132 TTI HN3 H N N 133 TTI H6 H N N 134 TTI H6A H N N 135 TTI "H1'" H N N 136 TTI "H2'" H N N 137 TTI "H2'A" H N N 138 TTI "H3'" H N N 139 TTI "HO3'" H N N 140 TTI "H4'" H N N 141 TTI "H5'" H N N 142 TTI "H5'A" H N N 143 TTI HO2P H N N 144 UMS OP3 O N N 145 UMS P P N N 146 UMS OP1 O N N 147 UMS OP2 O N N 148 UMS "O5'" O N N 149 UMS "C5'" C N N 150 UMS "C4'" C N R 151 UMS "O4'" O N N 152 UMS "C3'" C N R 153 UMS "O3'" O N N 154 UMS "C2'" C N R 155 UMS "SE2'" SE N N 156 UMS "C1'" C N R 157 UMS "CA'" C N N 158 UMS N1 N N N 159 UMS C2 C N N 160 UMS O2 O N N 161 UMS N3 N N N 162 UMS C4 C N N 163 UMS O4 O N N 164 UMS C5 C N N 165 UMS C6 C N N 166 UMS HOP3 H N N 167 UMS HOP2 H N N 168 UMS "H5'" H N N 169 UMS "H5'2" H N N 170 UMS "H4'" H N N 171 UMS "H3'" H N N 172 UMS "HO3'" H N N 173 UMS "H2'" H N N 174 UMS "H1'" H N N 175 UMS "HA'" H N N 176 UMS "HA'2" H N N 177 UMS "HA'3" H N N 178 UMS H3 H N N 179 UMS H5 H N N 180 UMS H6 H N N 181 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 HOH O H1 sing N N 113 HOH O H2 sing N N 114 TTI O3P P sing N N 115 TTI O3P HO3P sing N N 116 TTI C2 N1 sing N N 117 TTI N1 C6 sing N N 118 TTI N1 "C1'" sing N N 119 TTI N3 C2 sing N N 120 TTI O2 C2 doub N N 121 TTI N3 C4 sing N N 122 TTI N3 HN3 sing N N 123 TTI O4 C4 doub N N 124 TTI C4 C5 sing N N 125 TTI C5 TE5 doub N N 126 TTI C5 C6 sing N N 127 TTI C6 H6 sing N N 128 TTI C6 H6A sing N N 129 TTI "C1'" "O4'" sing N N 130 TTI "C1'" "C2'" sing N N 131 TTI "C1'" "H1'" sing N N 132 TTI "C2'" "C3'" sing N N 133 TTI "C2'" "H2'" sing N N 134 TTI "C2'" "H2'A" sing N N 135 TTI "C4'" "C3'" sing N N 136 TTI "C3'" "O3'" sing N N 137 TTI "C3'" "H3'" sing N N 138 TTI "O3'" "HO3'" sing N N 139 TTI "O4'" "C4'" sing N N 140 TTI "C4'" "C5'" sing N N 141 TTI "C4'" "H4'" sing N N 142 TTI "O5'" "C5'" sing N N 143 TTI "C5'" "H5'" sing N N 144 TTI "C5'" "H5'A" sing N N 145 TTI "O5'" P sing N N 146 TTI O1P P doub N N 147 TTI P O2P sing N N 148 TTI O2P HO2P sing N N 149 UMS OP3 P sing N N 150 UMS OP3 HOP3 sing N N 151 UMS P OP1 doub N N 152 UMS P OP2 sing N N 153 UMS P "O5'" sing N N 154 UMS OP2 HOP2 sing N N 155 UMS "O5'" "C5'" sing N N 156 UMS "C5'" "C4'" sing N N 157 UMS "C5'" "H5'" sing N N 158 UMS "C5'" "H5'2" sing N N 159 UMS "C4'" "O4'" sing N N 160 UMS "C4'" "C3'" sing N N 161 UMS "C4'" "H4'" sing N N 162 UMS "O4'" "C1'" sing N N 163 UMS "C3'" "O3'" sing N N 164 UMS "C3'" "C2'" sing N N 165 UMS "C3'" "H3'" sing N N 166 UMS "O3'" "HO3'" sing N N 167 UMS "C2'" "SE2'" sing N N 168 UMS "C2'" "C1'" sing N N 169 UMS "C2'" "H2'" sing N N 170 UMS "SE2'" "CA'" sing N N 171 UMS "C1'" N1 sing N N 172 UMS "C1'" "H1'" sing N N 173 UMS "CA'" "HA'" sing N N 174 UMS "CA'" "HA'2" sing N N 175 UMS "CA'" "HA'3" sing N N 176 UMS N1 C2 sing N N 177 UMS N1 C6 sing N N 178 UMS C2 O2 doub N N 179 UMS C2 N3 sing N N 180 UMS N3 C4 sing N N 181 UMS N3 H3 sing N N 182 UMS C4 O4 doub N N 183 UMS C4 C5 sing N N 184 UMS C5 C6 doub N N 185 UMS C5 H5 sing N N 186 UMS C6 H6 sing N N 187 # _ndb_struct_conf_na.entry_id 3K18 _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 A DC 8 7_556 -0.382 -0.096 -0.303 -18.917 -11.523 -2.510 1 A_DG1:DC8_A A 1 ? A 8 ? 19 1 1 A UMS 2 1_555 A DA 7 7_556 -0.108 -0.068 0.243 -8.887 -11.661 1.494 2 A_UMS2:DA7_A A 2 ? A 7 ? 20 1 1 A DG 3 1_555 A DC 6 7_556 -0.237 -0.177 0.163 -4.606 -13.468 0.007 3 A_DG3:DC6_A A 3 ? A 6 ? 19 1 1 A TTI 4 1_555 A DA 5 7_556 -0.128 -0.172 0.365 -5.945 -9.633 -4.571 4 A_TTI4:DA5_A A 4 ? A 5 ? 20 1 1 A DA 5 1_555 A TTI 4 7_556 0.128 -0.172 0.365 5.945 -9.633 -4.571 5 A_DA5:TTI4_A A 5 ? A 4 ? 20 1 1 A DC 6 1_555 A DG 3 7_556 0.237 -0.177 0.163 4.606 -13.468 0.007 6 A_DC6:DG3_A A 6 ? A 3 ? 19 1 1 A DA 7 1_555 A UMS 2 7_556 0.108 -0.068 0.243 8.887 -11.661 1.494 7 A_DA7:UMS2_A A 7 ? A 2 ? 20 1 1 A DC 8 1_555 A DG 1 7_556 0.382 -0.096 -0.303 18.917 -11.523 -2.510 8 A_DC8:DG1_A A 8 ? A 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 A DC 8 7_556 A UMS 2 1_555 A DA 7 7_556 0.397 -1.009 3.106 -3.410 12.880 31.149 -3.581 -1.171 2.454 22.727 6.018 33.813 1 AA_DG1UMS2:DA7DC8_AA A 1 ? A 8 ? A 2 ? A 7 ? 1 A UMS 2 1_555 A DA 7 7_556 A DG 3 1_555 A DC 6 7_556 0.639 -1.491 3.052 1.905 10.824 29.976 -4.414 -0.864 2.417 20.096 -3.537 31.884 2 AA_UMS2DG3:DC6DA7_AA A 2 ? A 7 ? A 3 ? A 6 ? 1 A DG 3 1_555 A DC 6 7_556 A TTI 4 1_555 A DA 5 7_556 -0.334 -1.676 3.338 -0.517 1.190 35.148 -2.954 0.475 3.286 1.969 0.856 35.171 3 AA_DG3TTI4:DA5DC6_AA A 3 ? A 6 ? A 4 ? A 5 ? 1 A TTI 4 1_555 A DA 5 7_556 A DA 5 1_555 A TTI 4 7_556 0.000 -1.657 2.863 0.000 3.687 29.476 -3.887 0.000 2.641 7.210 0.000 29.700 4 AA_TTI4DA5:TTI4DA5_AA A 4 ? A 5 ? A 5 ? A 4 ? 1 A DA 5 1_555 A TTI 4 7_556 A DC 6 1_555 A DG 3 7_556 0.334 -1.676 3.338 0.517 1.190 35.148 -2.954 -0.475 3.286 1.969 -0.856 35.171 5 AA_DA5DC6:DG3TTI4_AA A 5 ? A 4 ? A 6 ? A 3 ? 1 A DC 6 1_555 A DG 3 7_556 A DA 7 1_555 A UMS 2 7_556 -0.639 -1.491 3.052 -1.905 10.824 29.976 -4.414 0.864 2.417 20.096 3.537 31.884 6 AA_DC6DA7:UMS2DG3_AA A 6 ? A 3 ? A 7 ? A 2 ? 1 A DA 7 1_555 A UMS 2 7_556 A DC 8 1_555 A DG 1 7_556 -0.397 -1.009 3.106 3.410 12.880 31.149 -3.581 1.171 2.454 22.727 -6.018 33.813 7 AA_DA7DC8:DG1UMS2_AA A 7 ? A 2 ? A 8 ? A 1 ? # _atom_sites.entry_id 3K18 _atom_sites.fract_transf_matrix[1][1] 0.023422 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023422 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.041300 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P SE TE # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DG A 1 1 ? 45.006 35.020 17.555 1.00 17.79 ? 1 DG A "O5'" 1 ATOM 2 C "C5'" . DG A 1 1 ? 46.399 35.167 17.266 1.00 17.40 ? 1 DG A "C5'" 1 ATOM 3 C "C4'" . DG A 1 1 ? 46.930 33.935 16.535 1.00 17.79 ? 1 DG A "C4'" 1 ATOM 4 O "O4'" . DG A 1 1 ? 46.785 32.765 17.386 1.00 17.30 ? 1 DG A "O4'" 1 ATOM 5 C "C3'" . DG A 1 1 ? 46.234 33.543 15.229 1.00 17.06 ? 1 DG A "C3'" 1 ATOM 6 O "O3'" . DG A 1 1 ? 46.770 34.276 14.139 1.00 16.79 ? 1 DG A "O3'" 1 ATOM 7 C "C2'" . DG A 1 1 ? 46.608 32.065 15.167 1.00 15.36 ? 1 DG A "C2'" 1 ATOM 8 C "C1'" . DG A 1 1 ? 46.462 31.635 16.608 1.00 17.15 ? 1 DG A "C1'" 1 ATOM 9 N N9 . DG A 1 1 ? 45.095 31.197 16.911 1.00 16.30 ? 1 DG A N9 1 ATOM 10 C C8 . DG A 1 1 ? 44.125 31.913 17.579 1.00 17.04 ? 1 DG A C8 1 ATOM 11 N N7 . DG A 1 1 ? 42.993 31.256 17.681 1.00 16.74 ? 1 DG A N7 1 ATOM 12 C C5 . DG A 1 1 ? 43.226 30.046 17.061 1.00 15.99 ? 1 DG A C5 1 ATOM 13 C C6 . DG A 1 1 ? 42.374 28.937 16.862 1.00 16.91 ? 1 DG A C6 1 ATOM 14 O O6 . DG A 1 1 ? 41.207 28.830 17.252 1.00 18.49 ? 1 DG A O6 1 ATOM 15 N N1 . DG A 1 1 ? 43.005 27.885 16.180 1.00 16.67 ? 1 DG A N1 1 ATOM 16 C C2 . DG A 1 1 ? 44.316 27.928 15.734 1.00 17.22 ? 1 DG A C2 1 ATOM 17 N N2 . DG A 1 1 ? 44.768 26.842 15.094 1.00 17.44 ? 1 DG A N2 1 ATOM 18 N N3 . DG A 1 1 ? 45.128 28.974 15.913 1.00 16.32 ? 1 DG A N3 1 ATOM 19 C C4 . DG A 1 1 ? 44.516 29.993 16.569 1.00 15.91 ? 1 DG A C4 1 HETATM 20 P P . UMS A 1 2 ? 45.843 34.794 12.937 1.00 17.85 ? 2 UMS A P 1 HETATM 21 O OP1 . UMS A 1 2 ? 46.703 35.638 12.098 1.00 18.07 ? 2 UMS A OP1 1 HETATM 22 O OP2 . UMS A 1 2 ? 44.585 35.332 13.467 1.00 17.26 ? 2 UMS A OP2 1 HETATM 23 O "O5'" . UMS A 1 2 ? 45.472 33.472 12.109 1.00 17.53 ? 2 UMS A "O5'" 1 HETATM 24 C "C5'" . UMS A 1 2 ? 46.507 32.764 11.433 1.00 16.18 ? 2 UMS A "C5'" 1 HETATM 25 C "C4'" . UMS A 1 2 ? 46.045 31.404 10.967 1.00 17.44 ? 2 UMS A "C4'" 1 HETATM 26 O "O4'" . UMS A 1 2 ? 45.719 30.621 12.132 1.00 16.31 ? 2 UMS A "O4'" 1 HETATM 27 C "C3'" . UMS A 1 2 ? 44.759 31.400 10.160 1.00 19.21 ? 2 UMS A "C3'" 1 HETATM 28 O "O3'" . UMS A 1 2 ? 44.994 31.758 8.838 1.00 19.19 ? 2 UMS A "O3'" 1 HETATM 29 C "C2'" . UMS A 1 2 ? 44.361 29.934 10.285 1.00 19.50 ? 2 UMS A "C2'" 1 HETATM 30 SE "SE2'" . UMS A 1 2 ? 45.474 28.730 9.168 1.00 24.83 ? 2 UMS A "SE2'" 1 HETATM 31 C "C1'" . UMS A 1 2 ? 44.676 29.744 11.776 1.00 17.67 ? 2 UMS A "C1'" 1 HETATM 32 C "CA'" . UMS A 1 2 ? 44.456 27.045 9.281 1.00 20.97 ? 2 UMS A "CA'" 1 HETATM 33 N N1 . UMS A 1 2 ? 43.475 30.020 12.629 1.00 17.24 ? 2 UMS A N1 1 HETATM 34 C C2 . UMS A 1 2 ? 42.486 29.046 12.695 1.00 16.17 ? 2 UMS A C2 1 HETATM 35 O O2 . UMS A 1 2 ? 42.550 27.986 12.097 1.00 18.80 ? 2 UMS A O2 1 HETATM 36 N N3 . UMS A 1 2 ? 41.416 29.351 13.493 1.00 18.40 ? 2 UMS A N3 1 HETATM 37 C C4 . UMS A 1 2 ? 41.247 30.532 14.189 1.00 16.58 ? 2 UMS A C4 1 HETATM 38 O O4 . UMS A 1 2 ? 40.233 30.676 14.848 1.00 17.92 ? 2 UMS A O4 1 HETATM 39 C C5 . UMS A 1 2 ? 42.302 31.518 14.070 1.00 16.22 ? 2 UMS A C5 1 HETATM 40 C C6 . UMS A 1 2 ? 43.362 31.229 13.302 1.00 16.29 ? 2 UMS A C6 1 ATOM 41 P P . DG A 1 3 ? 43.863 32.573 8.039 1.00 21.96 ? 3 DG A P 1 ATOM 42 O OP1 . DG A 1 3 ? 44.610 32.984 6.867 1.00 21.51 ? 3 DG A OP1 1 ATOM 43 O OP2 . DG A 1 3 ? 43.179 33.557 8.904 1.00 23.00 ? 3 DG A OP2 1 ATOM 44 O "O5'" . DG A 1 3 ? 42.673 31.553 7.697 1.00 21.93 ? 3 DG A "O5'" 1 ATOM 45 C "C5'" . DG A 1 3 ? 42.846 30.475 6.853 1.00 21.03 ? 3 DG A "C5'" 1 ATOM 46 C "C4'" . DG A 1 3 ? 41.750 29.469 7.129 1.00 19.83 ? 3 DG A "C4'" 1 ATOM 47 O "O4'" . DG A 1 3 ? 41.756 29.154 8.547 1.00 19.67 ? 3 DG A "O4'" 1 ATOM 48 C "C3'" . DG A 1 3 ? 40.285 29.827 6.847 1.00 20.49 ? 3 DG A "C3'" 1 ATOM 49 O "O3'" . DG A 1 3 ? 39.973 29.786 5.455 1.00 20.48 ? 3 DG A "O3'" 1 ATOM 50 C "C2'" . DG A 1 3 ? 39.642 28.655 7.587 1.00 19.05 ? 3 DG A "C2'" 1 ATOM 51 C "C1'" . DG A 1 3 ? 40.490 28.631 8.872 1.00 17.28 ? 3 DG A "C1'" 1 ATOM 52 N N9 . DG A 1 3 ? 39.910 29.423 9.958 1.00 17.31 ? 3 DG A N9 1 ATOM 53 C C8 . DG A 1 3 ? 40.295 30.657 10.432 1.00 16.75 ? 3 DG A C8 1 ATOM 54 N N7 . DG A 1 3 ? 39.552 31.087 11.412 1.00 15.76 ? 3 DG A N7 1 ATOM 55 C C5 . DG A 1 3 ? 38.589 30.085 11.591 1.00 16.13 ? 3 DG A C5 1 ATOM 56 C C6 . DG A 1 3 ? 37.494 29.970 12.500 1.00 16.45 ? 3 DG A C6 1 ATOM 57 O O6 . DG A 1 3 ? 37.168 30.781 13.362 1.00 16.37 ? 3 DG A O6 1 ATOM 58 N N1 . DG A 1 3 ? 36.756 28.794 12.336 1.00 15.67 ? 3 DG A N1 1 ATOM 59 C C2 . DG A 1 3 ? 37.046 27.825 11.416 1.00 15.81 ? 3 DG A C2 1 ATOM 60 N N2 . DG A 1 3 ? 36.242 26.764 11.395 1.00 16.31 ? 3 DG A N2 1 ATOM 61 N N3 . DG A 1 3 ? 38.063 27.915 10.571 1.00 16.21 ? 3 DG A N3 1 ATOM 62 C C4 . DG A 1 3 ? 38.791 29.062 10.698 1.00 15.70 ? 3 DG A C4 1 HETATM 63 N N1 . TTI A 1 4 ? 35.063 28.835 8.555 1.00 15.69 ? 4 TTI A N1 1 HETATM 64 C C2 . TTI A 1 4 ? 34.128 28.971 9.559 1.00 14.39 ? 4 TTI A C2 1 HETATM 65 O O2 . TTI A 1 4 ? 33.268 28.164 9.750 1.00 14.76 ? 4 TTI A O2 1 HETATM 66 N N3 . TTI A 1 4 ? 34.228 30.100 10.343 1.00 14.80 ? 4 TTI A N3 1 HETATM 67 C C4 . TTI A 1 4 ? 35.162 31.104 10.180 1.00 15.70 ? 4 TTI A C4 1 HETATM 68 O O4 . TTI A 1 4 ? 35.207 32.100 10.892 1.00 16.03 ? 4 TTI A O4 1 HETATM 69 C C5 . TTI A 1 4 ? 36.089 30.902 9.095 1.00 16.20 ? 4 TTI A C5 1 HETATM 70 C C6 . TTI A 1 4 ? 36.027 29.802 8.341 1.00 15.65 ? 4 TTI A C6 1 HETATM 71 C "C1'" . TTI A 1 4 ? 35.029 27.613 7.685 1.00 15.49 ? 4 TTI A "C1'" 1 HETATM 72 C "C2'" . TTI A 1 4 ? 33.992 27.683 6.569 1.00 16.71 ? 4 TTI A "C2'" 1 HETATM 73 C "C3'" . TTI A 1 4 ? 34.847 28.154 5.396 1.00 17.42 ? 4 TTI A "C3'" 1 HETATM 74 O "O3'" . TTI A 1 4 ? 34.312 27.743 4.144 1.00 18.31 ? 4 TTI A "O3'" 1 HETATM 75 C "C4'" . TTI A 1 4 ? 36.174 27.443 5.663 1.00 17.60 ? 4 TTI A "C4'" 1 HETATM 76 O "O4'" . TTI A 1 4 ? 36.317 27.458 7.114 1.00 16.85 ? 4 TTI A "O4'" 1 HETATM 77 C "C5'" . TTI A 1 4 ? 37.386 28.054 4.972 1.00 17.91 ? 4 TTI A "C5'" 1 HETATM 78 O "O5'" . TTI A 1 4 ? 37.485 29.435 5.291 1.00 19.98 ? 4 TTI A "O5'" 1 HETATM 79 P P . TTI A 1 4 ? 38.655 30.421 4.806 1.00 20.85 ? 4 TTI A P 1 HETATM 80 O O1P . TTI A 1 4 ? 38.407 31.748 5.366 1.00 22.65 ? 4 TTI A O1P 1 HETATM 81 O O2P . TTI A 1 4 ? 38.774 30.270 3.355 1.00 22.26 ? 4 TTI A O2P 1 HETATM 82 TE TE5 . TTI A 1 4 ? 37.597 32.330 8.779 0.80 16.79 ? 4 TTI A TE5 1 ATOM 83 P P . DA A 1 5 ? 33.129 28.544 3.406 1.00 19.08 ? 5 DA A P 1 ATOM 84 O OP1 . DA A 1 5 ? 33.045 27.893 2.084 1.00 20.73 ? 5 DA A OP1 1 ATOM 85 O OP2 . DA A 1 5 ? 33.301 30.006 3.503 1.00 20.70 ? 5 DA A OP2 1 ATOM 86 O "O5'" . DA A 1 5 ? 31.826 28.168 4.243 1.00 15.76 ? 5 DA A "O5'" 1 ATOM 87 C "C5'" . DA A 1 5 ? 30.814 29.097 4.481 1.00 15.88 ? 5 DA A "C5'" 1 ATOM 88 C "C4'" . DA A 1 5 ? 29.955 28.554 5.599 1.00 16.47 ? 5 DA A "C4'" 1 ATOM 89 O "O4'" . DA A 1 5 ? 30.775 28.455 6.798 1.00 16.15 ? 5 DA A "O4'" 1 ATOM 90 C "C3'" . DA A 1 5 ? 28.786 29.456 5.982 1.00 16.05 ? 5 DA A "C3'" 1 ATOM 91 O "O3'" . DA A 1 5 ? 27.640 29.134 5.197 1.00 17.23 ? 5 DA A "O3'" 1 ATOM 92 C "C2'" . DA A 1 5 ? 28.575 29.154 7.463 1.00 16.56 ? 5 DA A "C2'" 1 ATOM 93 C "C1'" . DA A 1 5 ? 30.012 28.953 7.898 1.00 15.17 ? 5 DA A "C1'" 1 ATOM 94 N N9 . DA A 1 5 ? 30.673 30.164 8.408 1.00 13.49 ? 5 DA A N9 1 ATOM 95 C C8 . DA A 1 5 ? 31.727 30.805 7.828 1.00 14.59 ? 5 DA A C8 1 ATOM 96 N N7 . DA A 1 5 ? 32.158 31.859 8.471 1.00 13.96 ? 5 DA A N7 1 ATOM 97 C C5 . DA A 1 5 ? 31.317 31.918 9.583 1.00 13.09 ? 5 DA A C5 1 ATOM 98 C C6 . DA A 1 5 ? 31.264 32.811 10.690 1.00 13.12 ? 5 DA A C6 1 ATOM 99 N N6 . DA A 1 5 ? 32.132 33.822 10.816 1.00 14.26 ? 5 DA A N6 1 ATOM 100 N N1 . DA A 1 5 ? 30.305 32.602 11.628 1.00 14.02 ? 5 DA A N1 1 ATOM 101 C C2 . DA A 1 5 ? 29.471 31.571 11.471 1.00 14.04 ? 5 DA A C2 1 ATOM 102 N N3 . DA A 1 5 ? 29.446 30.666 10.483 1.00 15.08 ? 5 DA A N3 1 ATOM 103 C C4 . DA A 1 5 ? 30.390 30.885 9.556 1.00 14.48 ? 5 DA A C4 1 ATOM 104 P P . DC A 1 6 ? 26.632 30.264 4.710 1.00 18.38 ? 6 DC A P 1 ATOM 105 O OP1 . DC A 1 6 ? 25.580 29.511 3.982 1.00 20.61 ? 6 DC A OP1 1 ATOM 106 O OP2 . DC A 1 6 ? 27.440 31.366 4.153 1.00 18.21 ? 6 DC A OP2 1 ATOM 107 O "O5'" . DC A 1 6 ? 25.944 30.774 6.054 1.00 16.12 ? 6 DC A "O5'" 1 ATOM 108 C "C5'" . DC A 1 6 ? 25.005 29.996 6.744 1.00 15.45 ? 6 DC A "C5'" 1 ATOM 109 C "C4'" . DC A 1 6 ? 24.687 30.644 8.073 1.00 15.37 ? 6 DC A "C4'" 1 ATOM 110 O "O4'" . DC A 1 6 ? 25.921 30.788 8.814 1.00 15.34 ? 6 DC A "O4'" 1 ATOM 111 C "C3'" . DC A 1 6 ? 24.188 32.073 7.987 1.00 15.76 ? 6 DC A "C3'" 1 ATOM 112 O "O3'" . DC A 1 6 ? 22.831 32.059 7.595 1.00 17.63 ? 6 DC A "O3'" 1 ATOM 113 C "C2'" . DC A 1 6 ? 24.413 32.531 9.417 1.00 16.59 ? 6 DC A "C2'" 1 ATOM 114 C "C1'" . DC A 1 6 ? 25.813 31.955 9.610 1.00 14.85 ? 6 DC A "C1'" 1 ATOM 115 N N1 . DC A 1 6 ? 26.960 32.878 9.290 1.00 14.91 ? 6 DC A N1 1 ATOM 116 C C2 . DC A 1 6 ? 27.278 33.906 10.205 1.00 13.72 ? 6 DC A C2 1 ATOM 117 O O2 . DC A 1 6 ? 26.592 34.034 11.233 1.00 15.93 ? 6 DC A O2 1 ATOM 118 N N3 . DC A 1 6 ? 28.337 34.737 9.952 1.00 13.21 ? 6 DC A N3 1 ATOM 119 C C4 . DC A 1 6 ? 29.068 34.595 8.827 1.00 12.96 ? 6 DC A C4 1 ATOM 120 N N4 . DC A 1 6 ? 30.098 35.432 8.623 1.00 13.70 ? 6 DC A N4 1 ATOM 121 C C5 . DC A 1 6 ? 28.735 33.564 7.879 1.00 13.14 ? 6 DC A C5 1 ATOM 122 C C6 . DC A 1 6 ? 27.699 32.741 8.138 1.00 14.03 ? 6 DC A C6 1 ATOM 123 P P . DA A 1 7 ? 22.243 33.294 6.801 1.00 18.94 ? 7 DA A P 1 ATOM 124 O OP1 . DA A 1 7 ? 20.895 32.849 6.358 1.00 21.45 ? 7 DA A OP1 1 ATOM 125 O OP2 . DA A 1 7 ? 23.207 33.886 5.839 1.00 19.52 ? 7 DA A OP2 1 ATOM 126 O "O5'" . DA A 1 7 ? 22.034 34.410 7.923 1.00 19.20 ? 7 DA A "O5'" 1 ATOM 127 C "C5'" . DA A 1 7 ? 21.162 34.194 9.035 1.00 18.31 ? 7 DA A "C5'" 1 ATOM 128 C "C4'" . DA A 1 7 ? 21.252 35.389 9.983 1.00 17.96 ? 7 DA A "C4'" 1 ATOM 129 O "O4'" . DA A 1 7 ? 22.583 35.478 10.532 1.00 16.89 ? 7 DA A "O4'" 1 ATOM 130 C "C3'" . DA A 1 7 ? 21.048 36.739 9.338 1.00 17.00 ? 7 DA A "C3'" 1 ATOM 131 O "O3'" . DA A 1 7 ? 19.681 37.007 9.299 1.00 18.63 ? 7 DA A "O3'" 1 ATOM 132 C "C2'" . DA A 1 7 ? 21.794 37.704 10.252 1.00 16.95 ? 7 DA A "C2'" 1 ATOM 133 C "C1'" . DA A 1 7 ? 22.965 36.830 10.659 1.00 15.82 ? 7 DA A "C1'" 1 ATOM 134 N N9 . DA A 1 7 ? 24.207 36.989 9.922 1.00 14.28 ? 7 DA A N9 1 ATOM 135 C C8 . DA A 1 7 ? 24.665 36.279 8.843 1.00 13.20 ? 7 DA A C8 1 ATOM 136 N N7 . DA A 1 7 ? 25.846 36.654 8.423 1.00 13.56 ? 7 DA A N7 1 ATOM 137 C C5 . DA A 1 7 ? 26.176 37.689 9.286 1.00 14.47 ? 7 DA A C5 1 ATOM 138 C C6 . DA A 1 7 ? 27.327 38.515 9.386 1.00 13.66 ? 7 DA A C6 1 ATOM 139 N N6 . DA A 1 7 ? 28.378 38.397 8.577 1.00 13.90 ? 7 DA A N6 1 ATOM 140 N N1 . DA A 1 7 ? 27.345 39.463 10.369 1.00 15.29 ? 7 DA A N1 1 ATOM 141 C C2 . DA A 1 7 ? 26.287 39.572 11.196 1.00 15.11 ? 7 DA A C2 1 ATOM 142 N N3 . DA A 1 7 ? 25.163 38.858 11.195 1.00 14.49 ? 7 DA A N3 1 ATOM 143 C C4 . DA A 1 7 ? 25.182 37.911 10.228 1.00 15.04 ? 7 DA A C4 1 ATOM 144 P P . DC A 1 8 ? 19.051 37.985 8.224 1.00 20.38 ? 8 DC A P 1 ATOM 145 O OP1 . DC A 1 8 ? 17.587 37.984 8.392 1.00 21.35 ? 8 DC A OP1 1 ATOM 146 O OP2 . DC A 1 8 ? 19.594 37.586 6.925 1.00 19.96 ? 8 DC A OP2 1 ATOM 147 O "O5'" . DC A 1 8 ? 19.605 39.420 8.577 1.00 19.78 ? 8 DC A "O5'" 1 ATOM 148 C "C5'" . DC A 1 8 ? 19.143 40.102 9.739 1.00 19.18 ? 8 DC A "C5'" 1 ATOM 149 C "C4'" . DC A 1 8 ? 19.837 41.437 9.886 1.00 19.59 ? 8 DC A "C4'" 1 ATOM 150 O "O4'" . DC A 1 8 ? 21.260 41.203 9.988 1.00 19.43 ? 8 DC A "O4'" 1 ATOM 151 C "C3'" . DC A 1 8 ? 19.618 42.460 8.773 1.00 21.72 ? 8 DC A "C3'" 1 ATOM 152 O "O3'" . DC A 1 8 ? 19.219 43.695 9.349 1.00 24.17 ? 8 DC A "O3'" 1 ATOM 153 C "C2'" . DC A 1 8 ? 20.960 42.609 8.083 1.00 20.37 ? 8 DC A "C2'" 1 ATOM 154 C "C1'" . DC A 1 8 ? 21.942 42.104 9.142 1.00 19.18 ? 8 DC A "C1'" 1 ATOM 155 N N1 . DC A 1 8 ? 23.117 41.410 8.487 1.00 17.25 ? 8 DC A N1 1 ATOM 156 C C2 . DC A 1 8 ? 24.396 41.948 8.671 1.00 17.23 ? 8 DC A C2 1 ATOM 157 O O2 . DC A 1 8 ? 24.519 42.938 9.383 1.00 17.77 ? 8 DC A O2 1 ATOM 158 N N3 . DC A 1 8 ? 25.464 41.366 8.066 1.00 17.23 ? 8 DC A N3 1 ATOM 159 C C4 . DC A 1 8 ? 25.267 40.290 7.296 1.00 16.47 ? 8 DC A C4 1 ATOM 160 N N4 . DC A 1 8 ? 26.338 39.759 6.725 1.00 14.96 ? 8 DC A N4 1 ATOM 161 C C5 . DC A 1 8 ? 23.969 39.700 7.097 1.00 15.36 ? 8 DC A C5 1 ATOM 162 C C6 . DC A 1 8 ? 22.938 40.295 7.694 1.00 16.33 ? 8 DC A C6 1 HETATM 163 O O . HOH B 2 . ? 27.898 28.256 10.787 1.00 16.88 ? 11 HOH A O 1 HETATM 164 O O . HOH B 2 . ? 25.678 27.175 9.386 1.00 20.92 ? 12 HOH A O 1 HETATM 165 O O . HOH B 2 . ? 22.736 40.161 12.336 1.00 21.71 ? 13 HOH A O 1 HETATM 166 O O . HOH B 2 . ? 27.222 36.098 6.101 1.00 26.95 ? 14 HOH A O 1 HETATM 167 O O . HOH B 2 . ? 41.123 32.767 19.152 1.00 33.88 ? 15 HOH A O 1 HETATM 168 O O . HOH B 2 . ? 23.178 36.617 5.184 1.00 32.74 ? 16 HOH A O 1 HETATM 169 O O . HOH B 2 . ? 38.376 25.828 8.726 1.00 23.21 ? 17 HOH A O 1 HETATM 170 O O . HOH B 2 . ? 23.232 28.406 10.158 1.00 22.80 ? 18 HOH A O 1 HETATM 171 O O . HOH B 2 . ? 25.820 37.647 4.699 1.00 25.72 ? 19 HOH A O 1 HETATM 172 O O . HOH B 2 . ? 39.531 33.784 12.376 1.00 30.57 ? 20 HOH A O 1 HETATM 173 O O . HOH B 2 . ? 47.652 38.149 13.141 1.00 24.21 ? 21 HOH A O 1 HETATM 174 O O . HOH B 2 . ? 43.229 25.326 12.174 1.00 25.28 ? 22 HOH A O 1 HETATM 175 O O . HOH B 2 . ? 17.003 42.530 11.269 1.00 28.79 ? 23 HOH A O 1 HETATM 176 O O . HOH B 2 . ? 46.392 25.501 12.169 1.00 31.35 ? 24 HOH A O 1 HETATM 177 O O . HOH B 2 . ? 47.178 35.905 9.174 1.00 35.43 ? 25 HOH A O 1 HETATM 178 O O . HOH B 2 . ? 31.788 35.157 6.326 1.00 30.35 ? 26 HOH A O 1 HETATM 179 O O . HOH B 2 . ? 43.572 36.350 15.840 1.00 33.17 ? 27 HOH A O 1 HETATM 180 O O . HOH B 2 . ? 34.000 33.884 7.670 1.00 28.90 ? 28 HOH A O 1 HETATM 181 O O . HOH B 2 . ? 41.914 34.738 11.622 1.00 40.96 ? 29 HOH A O 1 HETATM 182 O O . HOH B 2 . ? 44.125 36.679 9.501 1.00 43.50 ? 30 HOH A O 1 HETATM 183 O O . HOH B 2 . ? 24.423 26.675 4.962 1.00 35.16 ? 31 HOH A O 1 HETATM 184 O O . HOH B 2 . ? 33.750 31.586 5.219 1.00 31.77 ? 32 HOH A O 1 HETATM 185 O O . HOH B 2 . ? 30.983 32.913 4.734 1.00 35.85 ? 33 HOH A O 1 HETATM 186 O O . HOH B 2 . ? 35.660 33.121 5.477 1.00 39.12 ? 34 HOH A O 1 HETATM 187 O O . HOH B 2 . ? 18.063 33.583 6.687 1.00 43.10 ? 35 HOH A O 1 HETATM 188 O O . HOH B 2 . ? 28.046 33.914 4.488 1.00 34.62 ? 36 HOH A O 1 HETATM 189 O O . HOH B 2 . ? 29.616 34.918 2.536 1.00 45.03 ? 37 HOH A O 1 HETATM 190 O O . HOH B 2 . ? 39.209 33.962 8.167 1.00 41.00 ? 38 HOH A O 1 #