0.021984
0.000000
0.000000
0.000000
0.008667
0.000000
0.000000
0.000000
0.005032
0.00000
0.00000
0.00000
Gu, M.
Rice, C.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90
90
90
45.487
115.381
198.739
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
O
N
89
N
P
N
90
N
O
N
91
N
O
N
92
N
O
N
93
N
C
N
94
R
C
N
95
N
O
N
96
S
C
N
97
N
O
N
98
N
C
N
99
R
C
N
100
N
N
N
101
N
C
N
102
N
O
N
103
N
N
N
104
N
C
N
105
N
O
N
106
N
C
N
107
N
C
N
108
N
C
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
N
N
125
S
C
N
126
N
C
N
127
N
O
N
128
N
C
N
129
N
C
N
130
N
C
N
131
N
O
N
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
N
N
145
S
C
N
146
N
C
N
147
N
O
N
148
N
C
N
149
N
C
N
150
N
C
N
151
N
O
N
152
N
O
N
153
N
O
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
N
N
164
N
C
N
165
N
C
N
166
N
O
N
167
N
O
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
N
N
174
S
C
N
175
N
C
N
176
N
O
N
177
N
C
Y
178
N
C
Y
179
N
N
Y
180
N
C
Y
181
N
C
Y
182
N
N
N
183
N
O
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
O
N
195
N
H
N
196
N
H
N
197
N
N
N
198
S
C
N
199
N
C
N
200
N
O
N
201
S
C
N
202
N
C
N
203
N
C
N
204
N
C
N
205
N
O
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
N
N
220
S
C
N
221
N
C
N
222
N
O
N
223
N
C
N
224
N
C
N
225
N
C
N
226
N
C
N
227
N
O
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
N
N
242
S
C
N
243
N
C
N
244
N
O
N
245
N
C
N
246
N
C
N
247
N
C
N
248
N
C
N
249
N
N
N
250
N
O
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
N
N
267
S
C
N
268
N
C
N
269
N
O
N
270
N
C
N
271
N
C
N
272
N
S
N
273
N
C
N
274
N
O
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
N
N
287
S
C
N
288
N
C
N
289
N
O
N
290
N
C
Y
291
N
C
Y
292
N
C
Y
293
N
C
Y
294
N
C
Y
295
N
C
Y
296
N
C
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
N
N
310
S
C
N
311
N
C
N
312
N
O
N
313
N
C
N
314
N
C
N
315
N
C
N
316
N
O
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
N
N
327
S
C
N
328
N
C
N
329
N
O
N
330
N
C
N
331
N
O
N
332
N
O
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
N
N
341
S
C
N
342
N
C
N
343
N
O
N
344
R
C
N
345
N
O
N
346
N
C
N
347
N
O
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
N
N
358
S
C
N
359
N
C
N
360
N
O
N
361
N
C
Y
362
N
C
Y
363
N
C
Y
364
N
C
Y
365
N
N
Y
366
N
C
Y
367
N
C
Y
368
N
C
Y
369
N
C
Y
370
N
C
N
371
N
O
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
N
N
385
S
C
N
386
N
C
N
387
N
O
N
388
N
C
Y
389
N
C
Y
390
N
C
Y
391
N
C
Y
392
N
C
Y
393
N
C
Y
394
N
C
N
395
N
O
N
396
N
O
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
N
N
409
S
C
N
410
N
C
N
411
N
O
N
412
N
C
N
413
N
C
N
414
N
C
N
415
N
O
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
doub
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
doub
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
doub
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
doub
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
Y
177
N
sing
Y
178
N
doub
Y
179
N
doub
N
180
N
sing
Y
181
N
sing
N
182
N
sing
Y
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
doub
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
doub
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
doub
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
doub
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
Y
285
N
doub
Y
286
N
sing
Y
287
N
sing
N
288
N
sing
Y
289
N
doub
N
290
N
sing
Y
291
N
doub
N
292
N
sing
Y
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
doub
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
doub
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
doub
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
Y
354
N
doub
Y
355
N
sing
Y
356
N
sing
N
357
N
sing
Y
358
N
doub
Y
359
N
sing
Y
360
N
sing
N
361
N
sing
Y
362
N
sing
Y
363
N
doub
N
364
N
sing
Y
365
N
doub
N
366
N
sing
Y
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
doub
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
Y
382
N
doub
Y
383
N
sing
Y
384
N
sing
N
385
N
sing
Y
386
N
doub
N
387
N
sing
Y
388
N
doub
N
389
N
sing
Y
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
doub
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
107
521
528
10.1073/pnas.0913380107
20080715
Three conformational snapshots of the hepatitis C virus NS3 helicase reveal a ratchet translocation mechanism.
2010
10.2210/pdb3kqk/pdb
pdb_00003kqk
1
CCD
ADSC QUANTUM 315r
SINGLE WAVELENGTH
M
x-ray
1
1.0809
1.0
X29A
NSLS
1.0809
SYNCHROTRON
NSLS BEAMLINE X29A
46670.980
Serine protease/NTPase/helicase NS3
3.4.21.98, 3.6.1.15, 3.6.1.-
2
man
polymer
1780.199
5'-D(*TP*TP*TP*TP*TP*T)-3'
2
syn
polymer
18.015
water
138
nat
water
Core protein p21, Capsid protein C, p21, Core protein p19, Envelope glycoprotein E1, gp32, gp35, Envelope glycoprotein E2, NS1, gp68, gp70, p7, Protease NS2-3, p23, Serine protease/NTPase/helicase NS3, Hepacivirin, NS3P, p70, Non-structural protein 4A, NS4A, p8, Non-structural protein 4B, NS4B, p27, Non-structural protein 5A, NS5A, p56, RNA-directed RNA polymerase, NS5B, p68
no
no
SPPAVPQTFQVAHLHAPTGSGKSTKVPAAYAAQGYKVLVLNPSVAATLGFGAYMSKAHGIDPNIRTGVRTITTGAPITYS
TYGKFLADGGCSGGAYDIIICDECHSTDSTTILGIGTVLDQAETAGARLVVLATATPPGSVTVPHPNIEEVALSSTGEIP
FYGKAIPIETIKGGRHLIFCHSKKKCDELAAKLSGLGLNAVAYYRGLDVSVIPTSGDVIVVATDALMTGFTGDFDSVIDC
NTCVTQTVDFSLDPTFTIETTTVPQDAVSRSQRRGRTGRGRMGIYRFVTPGERPSGMFDSSVLCECYDAGCAWYELTPAE
TSVRLRAYLNTPGLPVCQDHLEFWESVFTGLTHIDAHFLSQTKQAGDNFPYLVAYQATVCARAQAPPPSWDQMWKCLIRL
KPTLHGPTPLLYRLGAVQNEVTTTHPITKYIMACMS
SPPAVPQTFQVAHLHAPTGSGKSTKVPAAYAAQGYKVLVLNPSVAATLGFGAYMSKAHGIDPNIRTGVRTITTGAPITYS
TYGKFLADGGCSGGAYDIIICDECHSTDSTTILGIGTVLDQAETAGARLVVLATATPPGSVTVPHPNIEEVALSSTGEIP
FYGKAIPIETIKGGRHLIFCHSKKKCDELAAKLSGLGLNAVAYYRGLDVSVIPTSGDVIVVATDALMTGFTGDFDSVIDC
NTCVTQTVDFSLDPTFTIETTTVPQDAVSRSQRRGRTGRGRMGIYRFVTPGERPSGMFDSSVLCECYDAGCAWYELTPAE
TSVRLRAYLNTPGLPVCQDHLEFWESVFTGLTHIDAHFLSQTKQAGDNFPYLVAYQATVCARAQAPPPSWDQMWKCLIRL
KPTLHGPTPLLYRLGAVQNEVTTTHPITKYIMACMS
A,B
polypeptide(L)
no
no
(DT)(DT)(DT)(DT)(DT)(DT)
TTTTTT
C,D
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HCV
Con1
sample
NS3
333284
Hepatitis C virus
469008
Escherichia coli
BL21(DE3)
plasmid
pET28
1
2.69
54.29
VAPOR DIFFUSION, HANGING DROP
6.5
0.1 M MES pH 6.5, 22% (v/v) glycerol, 10% (w/v) PEG 8000 , VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
software
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Version format compliance
Refinement description
Data collection
Database references
1
0
2010-01-26
1
1
2011-07-13
1
2
2017-11-01
1
3
2024-02-21
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
RCSB
Y
RCSB
2009-11-17
REL
REL
HOH
water
HOH
1
3
HOH
HOH
1
A
HOH
2
3
HOH
HOH
2
A
HOH
5
3
HOH
HOH
5
A
HOH
8
3
HOH
HOH
8
A
HOH
9
3
HOH
HOH
9
A
HOH
10
3
HOH
HOH
10
A
HOH
13
3
HOH
HOH
13
A
HOH
15
3
HOH
HOH
15
A
HOH
19
3
HOH
HOH
19
A
HOH
23
3
HOH
HOH
23
A
HOH
25
3
HOH
HOH
25
A
HOH
28
3
HOH
HOH
28
A
HOH
29
3
HOH
HOH
29
A
HOH
31
3
HOH
HOH
31
A
HOH
33
3
HOH
HOH
33
A
HOH
34
3
HOH
HOH
34
A
HOH
35
3
HOH
HOH
35
A
HOH
36
3
HOH
HOH
36
A
HOH
38
3
HOH
HOH
38
A
HOH
40
3
HOH
HOH
40
A
HOH
41
3
HOH
HOH
41
A
HOH
42
3
HOH
HOH
42
A
HOH
44
3
HOH
HOH
44
A
HOH
47
3
HOH
HOH
47
A
HOH
49
3
HOH
HOH
49
A
HOH
50
3
HOH
HOH
50
A
HOH
51
3
HOH
HOH
51
A
HOH
52
3
HOH
HOH
52
A
HOH
53
3
HOH
HOH
53
A
HOH
54
3
HOH
HOH
54
A
HOH
55
3
HOH
HOH
55
A
HOH
56
3
HOH
HOH
56
A
HOH
58
3
HOH
HOH
58
A
HOH
59
3
HOH
HOH
59
A
HOH
62
3
HOH
HOH
62
A
HOH
63
3
HOH
HOH
63
A
HOH
65
3
HOH
HOH
65
A
HOH
66
3
HOH
HOH
66
A
HOH
67
3
HOH
HOH
67
A
HOH
68
3
HOH
HOH
68
A
HOH
69
3
HOH
HOH
69
A
HOH
71
3
HOH
HOH
71
A
HOH
74
3
HOH
HOH
74
A
HOH
76
3
HOH
HOH
76
A
HOH
77
3
HOH
HOH
77
A
HOH
79
3
HOH
HOH
79
A
HOH
81
3
HOH
HOH
81
A
HOH
85
3
HOH
HOH
85
A
HOH
86
3
HOH
HOH
86
A
HOH
88
3
HOH
HOH
88
A
HOH
92
3
HOH
HOH
92
A
HOH
94
3
HOH
HOH
94
A
HOH
96
3
HOH
HOH
96
A
HOH
97
3
HOH
HOH
97
A
HOH
98
3
HOH
HOH
98
A
HOH
103
3
HOH
HOH
103
A
HOH
104
3
HOH
HOH
104
A
HOH
106
3
HOH
HOH
106
A
HOH
107
3
HOH
HOH
107
A
HOH
111
3
HOH
HOH
111
A
HOH
113
3
HOH
HOH
113
A
HOH
114
3
HOH
HOH
114
A
HOH
115
3
HOH
HOH
115
A
HOH
116
3
HOH
HOH
116
A
HOH
121
3
HOH
HOH
121
A
HOH
123
3
HOH
HOH
123
A
HOH
124
3
HOH
HOH
124
A
HOH
127
3
HOH
HOH
127
A
HOH
129
3
HOH
HOH
129
A
HOH
132
3
HOH
HOH
132
A
HOH
133
3
HOH
HOH
133
A
HOH
134
3
HOH
HOH
134
A
HOH
3
3
HOH
HOH
3
B
HOH
4
3
HOH
HOH
4
B
HOH
6
3
HOH
HOH
6
B
HOH
7
3
HOH
HOH
7
B
HOH
11
3
HOH
HOH
11
B
HOH
14
3
HOH
HOH
14
B
HOH
16
3
HOH
HOH
16
B
HOH
17
3
HOH
HOH
17
B
HOH
18
3
HOH
HOH
18
B
HOH
20
3
HOH
HOH
20
B
HOH
21
3
HOH
HOH
21
B
HOH
22
3
HOH
HOH
22
B
HOH
24
3
HOH
HOH
24
B
HOH
27
3
HOH
HOH
27
B
HOH
30
3
HOH
HOH
30
B
HOH
32
3
HOH
HOH
32
B
HOH
39
3
HOH
HOH
39
B
HOH
43
3
HOH
HOH
43
B
HOH
45
3
HOH
HOH
45
B
HOH
46
3
HOH
HOH
46
B
HOH
48
3
HOH
HOH
48
B
HOH
57
3
HOH
HOH
57
B
HOH
60
3
HOH
HOH
60
B
HOH
64
3
HOH
HOH
64
B
HOH
70
3
HOH
HOH
70
B
HOH
72
3
HOH
HOH
72
B
HOH
73
3
HOH
HOH
73
B
HOH
75
3
HOH
HOH
75
B
HOH
78
3
HOH
HOH
78
B
HOH
80
3
HOH
HOH
80
B
HOH
82
3
HOH
HOH
82
B
HOH
83
3
HOH
HOH
83
B
HOH
84
3
HOH
HOH
84
B
HOH
87
3
HOH
HOH
87
B
HOH
89
3
HOH
HOH
89
B
HOH
91
3
HOH
HOH
91
B
HOH
93
3
HOH
HOH
93
B
HOH
95
3
HOH
HOH
95
B
HOH
99
3
HOH
HOH
99
B
HOH
100
3
HOH
HOH
100
B
HOH
101
3
HOH
HOH
101
B
HOH
102
3
HOH
HOH
102
B
HOH
105
3
HOH
HOH
105
B
HOH
108
3
HOH
HOH
108
B
HOH
109
3
HOH
HOH
109
B
HOH
110
3
HOH
HOH
110
B
HOH
112
3
HOH
HOH
112
B
HOH
117
3
HOH
HOH
117
B
HOH
118
3
HOH
HOH
118
B
HOH
119
3
HOH
HOH
119
B
HOH
120
3
HOH
HOH
120
B
HOH
122
3
HOH
HOH
122
B
HOH
125
3
HOH
HOH
125
B
HOH
126
3
HOH
HOH
126
B
HOH
128
3
HOH
HOH
128
B
HOH
130
3
HOH
HOH
130
B
HOH
131
3
HOH
HOH
131
B
HOH
135
3
HOH
HOH
135
B
HOH
136
3
HOH
HOH
136
B
HOH
137
3
HOH
HOH
137
B
HOH
138
3
HOH
HOH
138
B
HOH
12
3
HOH
HOH
12
C
HOH
37
3
HOH
HOH
37
C
HOH
61
3
HOH
HOH
61
C
HOH
90
3
HOH
HOH
90
C
HOH
26
3
HOH
HOH
26
D
SER
189
n
1
SER
189
A
PRO
190
n
2
PRO
190
A
PRO
191
n
3
PRO
191
A
ALA
192
n
4
ALA
192
A
VAL
193
n
5
VAL
193
A
PRO
194
n
6
PRO
194
A
GLN
195
n
7
GLN
195
A
THR
196
n
8
THR
196
A
PHE
197
n
9
PHE
197
A
GLN
198
n
10
GLN
198
A
VAL
199
n
11
VAL
199
A
ALA
200
n
12
ALA
200
A
HIS
201
n
13
HIS
201
A
LEU
202
n
14
LEU
202
A
HIS
203
n
15
HIS
203
A
ALA
204
n
16
ALA
204
A
PRO
205
n
17
PRO
205
A
THR
206
n
18
THR
206
A
GLY
207
n
19
GLY
207
A
SER
208
n
20
SER
208
A
GLY
209
n
21
GLY
209
A
LYS
210
n
22
LYS
210
A
SER
211
n
23
SER
211
A
THR
212
n
24
THR
212
A
LYS
213
n
25
LYS
213
A
VAL
214
n
26
VAL
214
A
PRO
215
n
27
PRO
215
A
ALA
216
n
28
ALA
216
A
ALA
217
n
29
ALA
217
A
TYR
218
n
30
TYR
218
A
ALA
219
n
31
ALA
219
A
ALA
220
n
32
ALA
220
A
GLN
221
n
33
GLN
221
A
GLY
222
n
34
GLY
222
A
TYR
223
n
35
TYR
223
A
LYS
224
n
36
LYS
224
A
VAL
225
n
37
VAL
225
A
LEU
226
n
38
LEU
226
A
VAL
227
n
39
VAL
227
A
LEU
228
n
40
LEU
228
A
ASN
229
n
41
ASN
229
A
PRO
230
n
42
PRO
230
A
SER
231
n
43
SER
231
A
VAL
232
n
44
VAL
232
A
ALA
233
n
45
ALA
233
A
ALA
234
n
46
ALA
234
A
THR
235
n
47
THR
235
A
LEU
236
n
48
LEU
236
A
GLY
237
n
49
GLY
237
A
PHE
238
n
50
PHE
238
A
GLY
239
n
51
GLY
239
A
ALA
240
n
52
ALA
240
A
TYR
241
n
53
TYR
241
A
MET
242
n
54
MET
242
A
SER
243
n
55
SER
243
A
LYS
244
n
56
LYS
244
A
ALA
245
n
57
ALA
245
A
HIS
246
n
58
HIS
246
A
GLY
247
n
59
GLY
247
A
ILE
248
n
60
ILE
248
A
ASP
249
n
61
ASP
249
A
PRO
250
n
62
PRO
250
A
ASN
251
n
63
ASN
251
A
ILE
252
n
64
ILE
252
A
ARG
253
n
65
ARG
253
A
THR
254
n
66
THR
254
A
GLY
255
n
67
GLY
255
A
VAL
256
n
68
VAL
256
A
ARG
257
n
69
ARG
257
A
THR
258
n
70
THR
258
A
ILE
259
n
71
ILE
259
A
THR
260
n
72
THR
260
A
THR
261
n
73
THR
261
A
GLY
262
n
74
GLY
262
A
ALA
263
n
75
ALA
263
A
PRO
264
n
76
PRO
264
A
ILE
265
n
77
ILE
265
A
THR
266
n
78
THR
266
A
TYR
267
n
79
TYR
267
A
SER
268
n
80
SER
268
A
THR
269
n
81
THR
269
A
TYR
270
n
82
TYR
270
A
GLY
271
n
83
GLY
271
A
LYS
272
n
84
LYS
272
A
PHE
273
n
85
PHE
273
A
LEU
274
n
86
LEU
274
A
ALA
275
n
87
ALA
275
A
ASP
276
n
88
ASP
276
A
GLY
277
n
89
GLY
277
A
GLY
278
n
90
GLY
278
A
CYS
279
n
91
CYS
279
A
SER
280
n
92
SER
280
A
GLY
281
n
93
GLY
281
A
GLY
282
n
94
GLY
282
A
ALA
283
n
95
ALA
283
A
TYR
284
n
96
TYR
284
A
ASP
285
n
97
ASP
285
A
ILE
286
n
98
ILE
286
A
ILE
287
n
99
ILE
287
A
ILE
288
n
100
ILE
288
A
CYS
289
n
101
CYS
289
A
ASP
290
n
102
ASP
290
A
GLU
291
n
103
GLU
291
A
CYS
292
n
104
CYS
292
A
HIS
293
n
105
HIS
293
A
SER
294
n
106
SER
294
A
THR
295
n
107
THR
295
A
ASP
296
n
108
ASP
296
A
SER
297
n
109
SER
297
A
THR
298
n
110
THR
298
A
THR
299
n
111
THR
299
A
ILE
300
n
112
ILE
300
A
LEU
301
n
113
LEU
301
A
GLY
302
n
114
GLY
302
A
ILE
303
n
115
ILE
303
A
GLY
304
n
116
GLY
304
A
THR
305
n
117
THR
305
A
VAL
306
n
118
VAL
306
A
LEU
307
n
119
LEU
307
A
ASP
308
n
120
ASP
308
A
GLN
309
n
121
GLN
309
A
ALA
310
n
122
ALA
310
A
GLU
311
n
123
GLU
311
A
THR
312
n
124
THR
312
A
ALA
313
n
125
ALA
313
A
GLY
314
n
126
GLY
314
A
ALA
315
n
127
ALA
315
A
ARG
316
n
128
ARG
316
A
LEU
317
n
129
LEU
317
A
VAL
318
n
130
VAL
318
A
VAL
319
n
131
VAL
319
A
LEU
320
n
132
LEU
320
A
ALA
321
n
133
ALA
321
A
THR
322
n
134
THR
322
A
ALA
323
n
135
ALA
323
A
THR
324
n
136
THR
324
A
PRO
325
n
137
PRO
325
A
PRO
326
n
138
PRO
326
A
GLY
327
n
139
GLY
327
A
SER
328
n
140
SER
328
A
VAL
329
n
141
VAL
329
A
THR
330
n
142
THR
330
A
VAL
331
n
143
VAL
331
A
PRO
332
n
144
PRO
332
A
HIS
333
n
145
HIS
333
A
PRO
334
n
146
PRO
334
A
ASN
335
n
147
ASN
335
A
ILE
336
n
148
ILE
336
A
GLU
337
n
149
GLU
337
A
GLU
338
n
150
GLU
338
A
VAL
339
n
151
VAL
339
A
ALA
340
n
152
ALA
340
A
LEU
341
n
153
LEU
341
A
SER
342
n
154
SER
342
A
SER
343
n
155
SER
343
A
THR
344
n
156
THR
344
A
GLY
345
n
157
GLY
345
A
GLU
346
n
158
GLU
346
A
ILE
347
n
159
ILE
347
A
PRO
348
n
160
PRO
348
A
PHE
349
n
161
PHE
349
A
TYR
350
n
162
TYR
350
A
GLY
351
n
163
GLY
351
A
LYS
352
n
164
LYS
352
A
ALA
353
n
165
ALA
353
A
ILE
354
n
166
ILE
354
A
PRO
355
n
167
PRO
355
A
ILE
356
n
168
ILE
356
A
GLU
357
n
169
GLU
357
A
THR
358
n
170
THR
358
A
ILE
359
n
171
ILE
359
A
LYS
360
n
172
LYS
360
A
GLY
361
n
173
GLY
361
A
GLY
362
n
174
GLY
362
A
ARG
363
n
175
ARG
363
A
HIS
364
n
176
HIS
364
A
LEU
365
n
177
LEU
365
A
ILE
366
n
178
ILE
366
A
PHE
367
n
179
PHE
367
A
CYS
368
n
180
CYS
368
A
HIS
369
n
181
HIS
369
A
SER
370
n
182
SER
370
A
LYS
371
n
183
LYS
371
A
LYS
372
n
184
LYS
372
A
LYS
373
n
185
LYS
373
A
CYS
374
n
186
CYS
374
A
ASP
375
n
187
ASP
375
A
GLU
376
n
188
GLU
376
A
LEU
377
n
189
LEU
377
A
ALA
378
n
190
ALA
378
A
ALA
379
n
191
ALA
379
A
LYS
380
n
192
LYS
380
A
LEU
381
n
193
LEU
381
A
SER
382
n
194
SER
382
A
GLY
383
n
195
GLY
383
A
LEU
384
n
196
LEU
384
A
GLY
385
n
197
GLY
385
A
LEU
386
n
198
LEU
386
A
ASN
387
n
199
ASN
387
A
ALA
388
n
200
ALA
388
A
VAL
389
n
201
VAL
389
A
ALA
390
n
202
ALA
390
A
TYR
391
n
203
TYR
391
A
TYR
392
n
204
TYR
392
A
ARG
393
n
205
ARG
393
A
GLY
394
n
206
GLY
394
A
LEU
395
n
207
LEU
395
A
ASP
396
n
208
ASP
396
A
VAL
397
n
209
VAL
397
A
SER
398
n
210
SER
398
A
VAL
399
n
211
VAL
399
A
ILE
400
n
212
ILE
400
A
PRO
401
n
213
PRO
401
A
THR
402
n
214
THR
402
A
SER
403
n
215
SER
403
A
GLY
404
n
216
GLY
404
A
ASP
405
n
217
ASP
405
A
VAL
406
n
218
VAL
406
A
ILE
407
n
219
ILE
407
A
VAL
408
n
220
VAL
408
A
VAL
409
n
221
VAL
409
A
ALA
410
n
222
ALA
410
A
THR
411
n
223
THR
411
A
ASP
412
n
224
ASP
412
A
ALA
413
n
225
ALA
413
A
LEU
414
n
226
LEU
414
A
MET
415
n
227
MET
415
A
THR
416
n
228
THR
416
A
GLY
417
n
229
GLY
417
A
PHE
418
n
230
PHE
418
A
THR
419
n
231
THR
419
A
GLY
420
n
232
GLY
420
A
ASP
421
n
233
ASP
421
A
PHE
422
n
234
PHE
422
A
ASP
423
n
235
ASP
423
A
SER
424
n
236
SER
424
A
VAL
425
n
237
VAL
425
A
ILE
426
n
238
ILE
426
A
ASP
427
n
239
ASP
427
A
CYS
428
n
240
CYS
428
A
ASN
429
n
241
ASN
429
A
THR
430
n
242
THR
430
A
CYS
431
n
243
CYS
431
A
VAL
432
n
244
VAL
432
A
THR
433
n
245
THR
433
A
GLN
434
n
246
GLN
434
A
THR
435
n
247
THR
435
A
VAL
436
n
248
VAL
436
A
ASP
437
n
249
ASP
437
A
PHE
438
n
250
PHE
438
A
SER
439
n
251
SER
439
A
LEU
440
n
252
LEU
440
A
ASP
441
n
253
ASP
441
A
PRO
442
n
254
PRO
442
A
THR
443
n
255
THR
443
A
PHE
444
n
256
PHE
444
A
THR
445
n
257
THR
445
A
ILE
446
n
258
ILE
446
A
GLU
447
n
259
GLU
447
A
THR
448
n
260
THR
448
A
THR
449
n
261
THR
449
A
THR
450
n
262
THR
450
A
VAL
451
n
263
VAL
451
A
PRO
452
n
264
PRO
452
A
GLN
453
n
265
GLN
453
A
ASP
454
n
266
ASP
454
A
ALA
455
n
267
ALA
455
A
VAL
456
n
268
VAL
456
A
SER
457
n
269
SER
457
A
ARG
458
n
270
ARG
458
A
SER
459
n
271
SER
459
A
GLN
460
n
272
GLN
460
A
ARG
461
n
273
ARG
461
A
ARG
462
n
274
ARG
462
A
GLY
463
n
275
GLY
463
A
ARG
464
n
276
ARG
464
A
THR
465
n
277
THR
465
A
GLY
466
n
278
GLY
466
A
ARG
467
n
279
ARG
467
A
GLY
468
n
280
GLY
468
A
ARG
469
n
281
ARG
469
A
MET
470
n
282
MET
470
A
GLY
471
n
283
GLY
471
A
ILE
472
n
284
ILE
472
A
TYR
473
n
285
TYR
473
A
ARG
474
n
286
ARG
474
A
PHE
475
n
287
PHE
475
A
VAL
476
n
288
VAL
476
A
THR
477
n
289
THR
477
A
PRO
478
n
290
PRO
478
A
GLY
479
n
291
GLY
479
A
GLU
480
n
292
GLU
480
A
ARG
481
n
293
ARG
481
A
PRO
482
n
294
PRO
482
A
SER
483
n
295
SER
483
A
GLY
484
n
296
GLY
484
A
MET
485
n
297
MET
485
A
PHE
486
n
298
PHE
486
A
ASP
487
n
299
ASP
487
A
SER
488
n
300
SER
488
A
SER
489
n
301
SER
489
A
VAL
490
n
302
VAL
490
A
LEU
491
n
303
LEU
491
A
CYS
492
n
304
CYS
492
A
GLU
493
n
305
GLU
493
A
CYS
494
n
306
CYS
494
A
TYR
495
n
307
TYR
495
A
ASP
496
n
308
ASP
496
A
ALA
497
n
309
ALA
497
A
GLY
498
n
310
GLY
498
A
CYS
499
n
311
CYS
499
A
ALA
500
n
312
ALA
500
A
TRP
501
n
313
TRP
501
A
TYR
502
n
314
TYR
502
A
GLU
503
n
315
GLU
503
A
LEU
504
n
316
LEU
504
A
THR
505
n
317
THR
505
A
PRO
506
n
318
PRO
506
A
ALA
507
n
319
ALA
507
A
GLU
508
n
320
GLU
508
A
THR
509
n
321
THR
509
A
SER
510
n
322
SER
510
A
VAL
511
n
323
VAL
511
A
ARG
512
n
324
ARG
512
A
LEU
513
n
325
LEU
513
A
ARG
514
n
326
ARG
514
A
ALA
515
n
327
ALA
515
A
TYR
516
n
328
TYR
516
A
LEU
517
n
329
LEU
517
A
ASN
518
n
330
ASN
518
A
THR
519
n
331
THR
519
A
PRO
520
n
332
PRO
520
A
GLY
521
n
333
GLY
521
A
LEU
522
n
334
LEU
522
A
PRO
523
n
335
PRO
523
A
VAL
524
n
336
VAL
524
A
CYS
525
n
337
CYS
525
A
GLN
526
n
338
GLN
526
A
ASP
527
n
339
ASP
527
A
HIS
528
n
340
HIS
528
A
LEU
529
n
341
LEU
529
A
GLU
530
n
342
GLU
530
A
PHE
531
n
343
PHE
531
A
TRP
532
n
344
TRP
532
A
GLU
533
n
345
GLU
533
A
SER
534
n
346
SER
534
A
VAL
535
n
347
VAL
535
A
PHE
536
n
348
PHE
536
A
THR
537
n
349
THR
537
A
GLY
538
n
350
GLY
538
A
LEU
539
n
351
LEU
539
A
THR
540
n
352
THR
540
A
HIS
541
n
353
HIS
541
A
ILE
542
n
354
ILE
542
A
ASP
543
n
355
ASP
543
A
ALA
544
n
356
ALA
544
A
HIS
545
n
357
HIS
545
A
PHE
546
n
358
PHE
546
A
LEU
547
n
359
LEU
547
A
SER
548
n
360
SER
548
A
GLN
549
n
361
GLN
549
A
THR
550
n
362
THR
550
A
LYS
551
n
363
LYS
551
A
GLN
552
n
364
GLN
552
A
ALA
553
n
365
ALA
553
A
GLY
554
n
366
GLY
554
A
ASP
555
n
367
ASP
555
A
ASN
556
n
368
ASN
556
A
PHE
557
n
369
PHE
557
A
PRO
558
n
370
PRO
558
A
TYR
559
n
371
TYR
559
A
LEU
560
n
372
LEU
560
A
VAL
561
n
373
VAL
561
A
ALA
562
n
374
ALA
562
A
TYR
563
n
375
TYR
563
A
GLN
564
n
376
GLN
564
A
ALA
565
n
377
ALA
565
A
THR
566
n
378
THR
566
A
VAL
567
n
379
VAL
567
A
CYS
568
n
380
CYS
568
A
ALA
569
n
381
ALA
569
A
ARG
570
n
382
ARG
570
A
ALA
571
n
383
ALA
571
A
GLN
572
n
384
GLN
572
A
ALA
573
n
385
ALA
573
A
PRO
574
n
386
PRO
574
A
PRO
575
n
387
PRO
575
A
PRO
576
n
388
PRO
576
A
SER
577
n
389
SER
577
A
TRP
578
n
390
TRP
578
A
ASP
579
n
391
ASP
579
A
GLN
580
n
392
GLN
580
A
MET
581
n
393
MET
581
A
TRP
582
n
394
TRP
582
A
LYS
583
n
395
LYS
583
A
CYS
584
n
396
CYS
584
A
LEU
585
n
397
LEU
585
A
ILE
586
n
398
ILE
586
A
ARG
587
n
399
ARG
587
A
LEU
588
n
400
LEU
588
A
LYS
589
n
401
LYS
589
A
PRO
590
n
402
PRO
590
A
THR
591
n
403
THR
591
A
LEU
592
n
404
LEU
592
A
HIS
593
n
405
HIS
593
A
GLY
594
n
406
GLY
594
A
PRO
595
n
407
PRO
595
A
THR
596
n
408
THR
596
A
PRO
597
n
409
PRO
597
A
LEU
598
n
410
LEU
598
A
LEU
599
n
411
LEU
599
A
TYR
600
n
412
TYR
600
A
ARG
601
n
413
ARG
601
A
LEU
602
n
414
LEU
602
A
GLY
603
n
415
GLY
603
A
ALA
604
n
416
ALA
604
A
VAL
605
n
417
VAL
605
A
GLN
606
n
418
GLN
606
A
ASN
607
n
419
ASN
607
A
GLU
608
n
420
GLU
608
A
VAL
609
n
421
VAL
609
A
THR
610
n
422
THR
610
A
THR
611
n
423
THR
611
A
THR
612
n
424
THR
612
A
HIS
613
n
425
HIS
613
A
PRO
614
n
426
PRO
614
A
ILE
615
n
427
ILE
615
A
THR
616
n
428
THR
616
A
LYS
617
n
429
LYS
617
A
TYR
618
n
430
TYR
618
A
ILE
619
n
431
ILE
619
A
MET
620
n
432
MET
620
A
ALA
621
n
433
ALA
621
A
CYS
622
n
434
CYS
622
A
MET
623
n
435
MET
623
A
SER
624
n
436
SER
624
A
SER
189
n
1
SER
189
B
PRO
190
n
2
PRO
190
B
PRO
191
n
3
PRO
191
B
ALA
192
n
4
ALA
192
B
VAL
193
n
5
VAL
193
B
PRO
194
n
6
PRO
194
B
GLN
195
n
7
GLN
195
B
THR
196
n
8
THR
196
B
PHE
197
n
9
PHE
197
B
GLN
198
n
10
GLN
198
B
VAL
199
n
11
VAL
199
B
ALA
200
n
12
ALA
200
B
HIS
201
n
13
HIS
201
B
LEU
202
n
14
LEU
202
B
HIS
203
n
15
HIS
203
B
ALA
204
n
16
ALA
204
B
PRO
205
n
17
PRO
205
B
THR
206
n
18
THR
206
B
GLY
207
n
19
GLY
207
B
SER
208
n
20
SER
208
B
GLY
209
n
21
GLY
209
B
LYS
210
n
22
LYS
210
B
SER
211
n
23
SER
211
B
THR
212
n
24
THR
212
B
LYS
213
n
25
LYS
213
B
VAL
214
n
26
VAL
214
B
PRO
215
n
27
PRO
215
B
ALA
216
n
28
ALA
216
B
ALA
217
n
29
ALA
217
B
TYR
218
n
30
TYR
218
B
ALA
219
n
31
ALA
219
B
ALA
220
n
32
ALA
220
B
GLN
221
n
33
GLN
221
B
GLY
222
n
34
GLY
222
B
TYR
223
n
35
TYR
223
B
LYS
224
n
36
LYS
224
B
VAL
225
n
37
VAL
225
B
LEU
226
n
38
LEU
226
B
VAL
227
n
39
VAL
227
B
LEU
228
n
40
LEU
228
B
ASN
229
n
41
ASN
229
B
PRO
230
n
42
PRO
230
B
SER
231
n
43
SER
231
B
VAL
232
n
44
VAL
232
B
ALA
233
n
45
ALA
233
B
ALA
234
n
46
ALA
234
B
THR
235
n
47
THR
235
B
LEU
236
n
48
LEU
236
B
GLY
237
n
49
GLY
237
B
PHE
238
n
50
PHE
238
B
GLY
239
n
51
GLY
239
B
ALA
240
n
52
ALA
240
B
TYR
241
n
53
TYR
241
B
MET
242
n
54
MET
242
B
SER
243
n
55
SER
243
B
LYS
244
n
56
LYS
244
B
ALA
245
n
57
ALA
245
B
HIS
246
n
58
HIS
246
B
GLY
247
n
59
GLY
247
B
ILE
248
n
60
ILE
248
B
ASP
249
n
61
ASP
249
B
PRO
250
n
62
PRO
250
B
ASN
251
n
63
ASN
251
B
ILE
252
n
64
ILE
252
B
ARG
253
n
65
ARG
253
B
THR
254
n
66
THR
254
B
GLY
255
n
67
GLY
255
B
VAL
256
n
68
VAL
256
B
ARG
257
n
69
ARG
257
B
THR
258
n
70
THR
258
B
ILE
259
n
71
ILE
259
B
THR
260
n
72
THR
260
B
THR
261
n
73
THR
261
B
GLY
262
n
74
GLY
262
B
ALA
263
n
75
ALA
263
B
PRO
264
n
76
PRO
264
B
ILE
265
n
77
ILE
265
B
THR
266
n
78
THR
266
B
TYR
267
n
79
TYR
267
B
SER
268
n
80
SER
268
B
THR
269
n
81
THR
269
B
TYR
270
n
82
TYR
270
B
GLY
271
n
83
GLY
271
B
LYS
272
n
84
LYS
272
B
PHE
273
n
85
PHE
273
B
LEU
274
n
86
LEU
274
B
ALA
275
n
87
ALA
275
B
ASP
276
n
88
ASP
276
B
GLY
277
n
89
GLY
277
B
GLY
278
n
90
GLY
278
B
CYS
279
n
91
CYS
279
B
SER
280
n
92
SER
280
B
GLY
281
n
93
GLY
281
B
GLY
282
n
94
GLY
282
B
ALA
283
n
95
ALA
283
B
TYR
284
n
96
TYR
284
B
ASP
285
n
97
ASP
285
B
ILE
286
n
98
ILE
286
B
ILE
287
n
99
ILE
287
B
ILE
288
n
100
ILE
288
B
CYS
289
n
101
CYS
289
B
ASP
290
n
102
ASP
290
B
GLU
291
n
103
GLU
291
B
CYS
292
n
104
CYS
292
B
HIS
293
n
105
HIS
293
B
SER
294
n
106
SER
294
B
THR
295
n
107
THR
295
B
ASP
296
n
108
ASP
296
B
SER
297
n
109
SER
297
B
THR
298
n
110
THR
298
B
THR
299
n
111
THR
299
B
ILE
300
n
112
ILE
300
B
LEU
301
n
113
LEU
301
B
GLY
302
n
114
GLY
302
B
ILE
303
n
115
ILE
303
B
GLY
304
n
116
GLY
304
B
THR
305
n
117
THR
305
B
VAL
306
n
118
VAL
306
B
LEU
307
n
119
LEU
307
B
ASP
308
n
120
ASP
308
B
GLN
309
n
121
GLN
309
B
ALA
310
n
122
ALA
310
B
GLU
311
n
123
GLU
311
B
THR
312
n
124
THR
312
B
ALA
313
n
125
ALA
313
B
GLY
314
n
126
GLY
314
B
ALA
315
n
127
ALA
315
B
ARG
316
n
128
ARG
316
B
LEU
317
n
129
LEU
317
B
VAL
318
n
130
VAL
318
B
VAL
319
n
131
VAL
319
B
LEU
320
n
132
LEU
320
B
ALA
321
n
133
ALA
321
B
THR
322
n
134
THR
322
B
ALA
323
n
135
ALA
323
B
THR
324
n
136
THR
324
B
PRO
325
n
137
PRO
325
B
PRO
326
n
138
PRO
326
B
GLY
327
n
139
GLY
327
B
SER
328
n
140
SER
328
B
VAL
329
n
141
VAL
329
B
THR
330
n
142
THR
330
B
VAL
331
n
143
VAL
331
B
PRO
332
n
144
PRO
332
B
HIS
333
n
145
HIS
333
B
PRO
334
n
146
PRO
334
B
ASN
335
n
147
ASN
335
B
ILE
336
n
148
ILE
336
B
GLU
337
n
149
GLU
337
B
GLU
338
n
150
GLU
338
B
VAL
339
n
151
VAL
339
B
ALA
340
n
152
ALA
340
B
LEU
341
n
153
LEU
341
B
SER
342
n
154
SER
342
B
SER
343
n
155
SER
343
B
THR
344
n
156
THR
344
B
GLY
345
n
157
GLY
345
B
GLU
346
n
158
GLU
346
B
ILE
347
n
159
ILE
347
B
PRO
348
n
160
PRO
348
B
PHE
349
n
161
PHE
349
B
TYR
350
n
162
TYR
350
B
GLY
351
n
163
GLY
351
B
LYS
352
n
164
LYS
352
B
ALA
353
n
165
ALA
353
B
ILE
354
n
166
ILE
354
B
PRO
355
n
167
PRO
355
B
ILE
356
n
168
ILE
356
B
GLU
357
n
169
GLU
357
B
THR
358
n
170
THR
358
B
ILE
359
n
171
ILE
359
B
LYS
360
n
172
LYS
360
B
GLY
361
n
173
GLY
361
B
GLY
362
n
174
GLY
362
B
ARG
363
n
175
ARG
363
B
HIS
364
n
176
HIS
364
B
LEU
365
n
177
LEU
365
B
ILE
366
n
178
ILE
366
B
PHE
367
n
179
PHE
367
B
CYS
368
n
180
CYS
368
B
HIS
369
n
181
HIS
369
B
SER
370
n
182
SER
370
B
LYS
371
n
183
LYS
371
B
LYS
372
n
184
LYS
372
B
LYS
373
n
185
LYS
373
B
CYS
374
n
186
CYS
374
B
ASP
375
n
187
ASP
375
B
GLU
376
n
188
GLU
376
B
LEU
377
n
189
LEU
377
B
ALA
378
n
190
ALA
378
B
ALA
379
n
191
ALA
379
B
LYS
380
n
192
LYS
380
B
LEU
381
n
193
LEU
381
B
SER
382
n
194
SER
382
B
GLY
383
n
195
GLY
383
B
LEU
384
n
196
LEU
384
B
GLY
385
n
197
GLY
385
B
LEU
386
n
198
LEU
386
B
ASN
387
n
199
ASN
387
B
ALA
388
n
200
ALA
388
B
VAL
389
n
201
VAL
389
B
ALA
390
n
202
ALA
390
B
TYR
391
n
203
TYR
391
B
TYR
392
n
204
TYR
392
B
ARG
393
n
205
ARG
393
B
GLY
394
n
206
GLY
394
B
LEU
395
n
207
LEU
395
B
ASP
396
n
208
ASP
396
B
VAL
397
n
209
VAL
397
B
SER
398
n
210
SER
398
B
VAL
399
n
211
VAL
399
B
ILE
400
n
212
ILE
400
B
PRO
401
n
213
PRO
401
B
THR
402
n
214
THR
402
B
SER
403
n
215
SER
403
B
GLY
404
n
216
GLY
404
B
ASP
405
n
217
ASP
405
B
VAL
406
n
218
VAL
406
B
ILE
407
n
219
ILE
407
B
VAL
408
n
220
VAL
408
B
VAL
409
n
221
VAL
409
B
ALA
410
n
222
ALA
410
B
THR
411
n
223
THR
411
B
ASP
412
n
224
ASP
412
B
ALA
413
n
225
ALA
413
B
LEU
414
n
226
LEU
414
B
MET
415
n
227
MET
415
B
THR
416
n
228
THR
416
B
GLY
417
n
229
GLY
417
B
PHE
418
n
230
PHE
418
B
THR
419
n
231
THR
419
B
GLY
420
n
232
GLY
420
B
ASP
421
n
233
ASP
421
B
PHE
422
n
234
PHE
422
B
ASP
423
n
235
ASP
423
B
SER
424
n
236
SER
424
B
VAL
425
n
237
VAL
425
B
ILE
426
n
238
ILE
426
B
ASP
427
n
239
ASP
427
B
CYS
428
n
240
CYS
428
B
ASN
429
n
241
ASN
429
B
THR
430
n
242
THR
430
B
CYS
431
n
243
CYS
431
B
VAL
432
n
244
VAL
432
B
THR
433
n
245
THR
433
B
GLN
434
n
246
GLN
434
B
THR
435
n
247
THR
435
B
VAL
436
n
248
VAL
436
B
ASP
437
n
249
ASP
437
B
PHE
438
n
250
PHE
438
B
SER
439
n
251
SER
439
B
LEU
440
n
252
LEU
440
B
ASP
441
n
253
ASP
441
B
PRO
442
n
254
PRO
442
B
THR
443
n
255
THR
443
B
PHE
444
n
256
PHE
444
B
THR
445
n
257
THR
445
B
ILE
446
n
258
ILE
446
B
GLU
447
n
259
GLU
447
B
THR
448
n
260
THR
448
B
THR
449
n
261
THR
449
B
THR
450
n
262
THR
450
B
VAL
451
n
263
VAL
451
B
PRO
452
n
264
PRO
452
B
GLN
453
n
265
GLN
453
B
ASP
454
n
266
ASP
454
B
ALA
455
n
267
ALA
455
B
VAL
456
n
268
VAL
456
B
SER
457
n
269
SER
457
B
ARG
458
n
270
ARG
458
B
SER
459
n
271
SER
459
B
GLN
460
n
272
GLN
460
B
ARG
461
n
273
ARG
461
B
ARG
462
n
274
ARG
462
B
GLY
463
n
275
GLY
463
B
ARG
464
n
276
ARG
464
B
THR
465
n
277
THR
465
B
GLY
466
n
278
GLY
466
B
ARG
467
n
279
ARG
467
B
GLY
468
n
280
GLY
468
B
ARG
469
n
281
ARG
469
B
MET
470
n
282
MET
470
B
GLY
471
n
283
GLY
471
B
ILE
472
n
284
ILE
472
B
TYR
473
n
285
TYR
473
B
ARG
474
n
286
ARG
474
B
PHE
475
n
287
PHE
475
B
VAL
476
n
288
VAL
476
B
THR
477
n
289
THR
477
B
PRO
478
n
290
PRO
478
B
GLY
479
n
291
GLY
479
B
GLU
480
n
292
GLU
480
B
ARG
481
n
293
ARG
481
B
PRO
482
n
294
PRO
482
B
SER
483
n
295
SER
483
B
GLY
484
n
296
GLY
484
B
MET
485
n
297
MET
485
B
PHE
486
n
298
PHE
486
B
ASP
487
n
299
ASP
487
B
SER
488
n
300
SER
488
B
SER
489
n
301
SER
489
B
VAL
490
n
302
VAL
490
B
LEU
491
n
303
LEU
491
B
CYS
492
n
304
CYS
492
B
GLU
493
n
305
GLU
493
B
CYS
494
n
306
CYS
494
B
TYR
495
n
307
TYR
495
B
ASP
496
n
308
ASP
496
B
ALA
497
n
309
ALA
497
B
GLY
498
n
310
GLY
498
B
CYS
499
n
311
CYS
499
B
ALA
500
n
312
ALA
500
B
TRP
501
n
313
TRP
501
B
TYR
502
n
314
TYR
502
B
GLU
503
n
315
GLU
503
B
LEU
504
n
316
LEU
504
B
THR
505
n
317
THR
505
B
PRO
506
n
318
PRO
506
B
ALA
507
n
319
ALA
507
B
GLU
508
n
320
GLU
508
B
THR
509
n
321
THR
509
B
SER
510
n
322
SER
510
B
VAL
511
n
323
VAL
511
B
ARG
512
n
324
ARG
512
B
LEU
513
n
325
LEU
513
B
ARG
514
n
326
ARG
514
B
ALA
515
n
327
ALA
515
B
TYR
516
n
328
TYR
516
B
LEU
517
n
329
LEU
517
B
ASN
518
n
330
ASN
518
B
THR
519
n
331
THR
519
B
PRO
520
n
332
PRO
520
B
GLY
521
n
333
GLY
521
B
LEU
522
n
334
LEU
522
B
PRO
523
n
335
PRO
523
B
VAL
524
n
336
VAL
524
B
CYS
525
n
337
CYS
525
B
GLN
526
n
338
GLN
526
B
ASP
527
n
339
ASP
527
B
HIS
528
n
340
HIS
528
B
LEU
529
n
341
LEU
529
B
GLU
530
n
342
GLU
530
B
PHE
531
n
343
PHE
531
B
TRP
532
n
344
TRP
532
B
GLU
533
n
345
GLU
533
B
SER
534
n
346
SER
534
B
VAL
535
n
347
VAL
535
B
PHE
536
n
348
PHE
536
B
THR
537
n
349
THR
537
B
GLY
538
n
350
GLY
538
B
LEU
539
n
351
LEU
539
B
THR
540
n
352
THR
540
B
HIS
541
n
353
HIS
541
B
ILE
542
n
354
ILE
542
B
ASP
543
n
355
ASP
543
B
ALA
544
n
356
ALA
544
B
HIS
545
n
357
HIS
545
B
PHE
546
n
358
PHE
546
B
LEU
547
n
359
LEU
547
B
SER
548
n
360
SER
548
B
GLN
549
n
361
GLN
549
B
THR
550
n
362
THR
550
B
LYS
551
n
363
LYS
551
B
GLN
552
n
364
GLN
552
B
ALA
553
n
365
ALA
553
B
GLY
554
n
366
GLY
554
B
ASP
555
n
367
ASP
555
B
ASN
556
n
368
ASN
556
B
PHE
557
n
369
PHE
557
B
PRO
558
n
370
PRO
558
B
TYR
559
n
371
TYR
559
B
LEU
560
n
372
LEU
560
B
VAL
561
n
373
VAL
561
B
ALA
562
n
374
ALA
562
B
TYR
563
n
375
TYR
563
B
GLN
564
n
376
GLN
564
B
ALA
565
n
377
ALA
565
B
THR
566
n
378
THR
566
B
VAL
567
n
379
VAL
567
B
CYS
568
n
380
CYS
568
B
ALA
569
n
381
ALA
569
B
ARG
570
n
382
ARG
570
B
ALA
571
n
383
ALA
571
B
GLN
572
n
384
GLN
572
B
ALA
573
n
385
ALA
573
B
PRO
574
n
386
PRO
574
B
PRO
575
n
387
PRO
575
B
PRO
576
n
388
PRO
576
B
SER
577
n
389
SER
577
B
TRP
578
n
390
TRP
578
B
ASP
579
n
391
ASP
579
B
GLN
580
n
392
GLN
580
B
MET
581
n
393
MET
581
B
TRP
582
n
394
TRP
582
B
LYS
583
n
395
LYS
583
B
CYS
584
n
396
CYS
584
B
LEU
585
n
397
LEU
585
B
ILE
586
n
398
ILE
586
B
ARG
587
n
399
ARG
587
B
LEU
588
n
400
LEU
588
B
LYS
589
n
401
LYS
589
B
PRO
590
n
402
PRO
590
B
THR
591
n
403
THR
591
B
LEU
592
n
404
LEU
592
B
HIS
593
n
405
HIS
593
B
GLY
594
n
406
GLY
594
B
PRO
595
n
407
PRO
595
B
THR
596
n
408
THR
596
B
PRO
597
n
409
PRO
597
B
LEU
598
n
410
LEU
598
B
LEU
599
n
411
LEU
599
B
TYR
600
n
412
TYR
600
B
ARG
601
n
413
ARG
601
B
LEU
602
n
414
LEU
602
B
GLY
603
n
415
GLY
603
B
ALA
604
n
416
ALA
604
B
VAL
605
n
417
VAL
605
B
GLN
606
n
418
GLN
606
B
ASN
607
n
419
ASN
607
B
GLU
608
n
420
GLU
608
B
VAL
609
n
421
VAL
609
B
THR
610
n
422
THR
610
B
THR
611
n
423
THR
611
B
THR
612
n
424
THR
612
B
HIS
613
n
425
HIS
613
B
PRO
614
n
426
PRO
614
B
ILE
615
n
427
ILE
615
B
THR
616
n
428
THR
616
B
LYS
617
n
429
LYS
617
B
TYR
618
n
430
TYR
618
B
ILE
619
n
431
ILE
619
B
MET
620
n
432
MET
620
B
ALA
621
n
433
ALA
621
B
CYS
622
n
434
CYS
622
B
MET
623
n
435
MET
623
B
SER
624
n
436
SER
624
B
DT
1
n
1
DT
1
C
DT
2
n
2
DT
2
C
DT
3
n
3
DT
3
C
DT
4
n
4
DT
4
C
DT
5
n
5
DT
5
C
DT
6
n
6
DT
6
C
DT
1
n
1
DT
1
D
DT
2
n
2
DT
2
D
DT
3
n
3
DT
3
D
DT
4
n
4
DT
4
D
DT
5
n
5
DT
5
D
DT
6
n
6
DT
6
D
author_and_software_defined_assembly
PISA
2
dimeric
author_and_software_defined_assembly
PISA
2
dimeric
1710
-16
19440
1830
-17
19190
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ALA
200
A
N
ALA
12
A
O
VAL
318
A
O
VAL
130
A
O
VAL
319
A
O
VAL
131
A
N
CYS
289
A
N
CYS
101
A
O
ILE
288
A
O
ILE
100
A
N
LEU
228
A
N
LEU
40
A
N
VAL
227
A
N
VAL
39
A
O
THR
266
A
O
THR
78
A
O
TYR
267
A
O
TYR
79
A
N
ASN
251
A
N
ASN
63
A
N
ILE
252
A
N
ILE
64
A
O
ILE
259
A
O
ILE
71
A
N
VAL
339
A
N
VAL
151
A
O
TYR
473
A
O
TYR
285
A
O
ARG
474
A
O
ARG
286
A
N
VAL
425
A
N
VAL
237
A
O
ILE
426
A
O
ILE
238
A
N
LEU
365
A
N
LEU
177
A
N
ILE
366
A
N
ILE
178
A
O
VAL
408
A
O
VAL
220
A
O
VAL
409
A
O
VAL
221
A
N
TYR
391
A
N
TYR
203
A
N
THR
435
A
N
THR
247
A
O
GLU
447
A
O
GLU
259
A
N
THR
596
A
N
THR
408
A
O
THR
610
A
O
THR
422
B
N
ALA
200
B
N
ALA
12
B
O
LEU
320
B
O
LEU
132
B
O
VAL
319
B
O
VAL
131
B
N
CYS
289
B
N
CYS
101
B
O
ILE
288
B
O
ILE
100
B
N
LEU
228
B
N
LEU
40
B
N
VAL
227
B
N
VAL
39
B
O
THR
266
B
O
THR
78
B
O
TYR
267
B
O
TYR
79
B
N
ASN
251
B
N
ASN
63
B
N
ILE
252
B
N
ILE
64
B
O
ILE
259
B
O
ILE
71
B
N
GLU
337
B
N
GLU
149
B
O
TYR
473
B
O
TYR
285
B
O
ILE
472
B
O
ILE
284
B
N
VAL
425
B
N
VAL
237
B
O
ILE
426
B
O
ILE
238
B
N
LEU
365
B
N
LEU
177
B
N
ILE
366
B
N
ILE
178
B
O
VAL
408
B
O
VAL
220
B
O
VAL
409
B
O
VAL
221
B
N
TYR
391
B
N
TYR
203
B
N
THR
435
B
N
THR
247
B
O
GLU
447
B
O
GLU
259
B
N
THR
596
B
N
THR
408
B
O
THR
610
B
O
THR
422
1
A
SER
208
-175.73
-47.78
1
A
THR
212
-127.95
-59.74
1
A
VAL
256
-67.06
-75.19
1
A
ALA
283
-143.40
-22.03
1
A
CYS
292
-61.18
3.22
1
A
PHE
349
-119.81
-130.95
1
A
TYR
350
-101.87
58.89
1
A
LYS
380
-50.77
-9.45
1
A
LEU
384
-143.05
17.95
1
A
SER
403
-141.67
-158.71
1
A
MET
415
-100.11
48.86
1
A
ASP
421
63.18
94.82
1
A
THR
443
-125.65
-100.63
1
A
LEU
602
-115.19
70.89
1
B
THR
206
48.66
81.46
1
B
SER
208
-167.11
-57.77
1
B
THR
212
-138.21
-60.32
1
B
SER
297
-29.66
-46.94
1
B
ALA
310
-44.98
-72.73
1
B
ASN
335
-102.23
45.31
1
B
PHE
349
-127.40
-108.34
1
B
LYS
360
-45.81
-80.59
1
B
TYR
392
177.94
159.28
1
B
THR
411
-92.39
-148.05
1
B
PHE
418
-173.11
119.10
1
B
LEU
440
39.64
40.13
1
B
THR
443
-106.03
-97.20
1
B
ARG
469
-110.38
-145.00
1
B
PRO
478
-76.04
-77.45
1
B
PHE
557
-114.50
71.91
1
B
LYS
583
-48.40
-18.03
1
B
GLN
606
-94.96
-61.70
1
B
ASN
607
-48.89
169.77
80.81
41.4
1.86
0.265
0.210
2.8
19.96
24872
24872
1.00
1.00
1
0
MOLECULAR REPLACEMENT
2.8
19.96
138
6922
0
234
6550
2.8
50
3KQK
28955
28955
-1
0.08
1
97
data reduction
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
DENZO
package
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
package
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
refinement
Axel T. Brunger
axel.brunger@yale.edu
Fortran_77
http://cns-online.org/
CNS
package
data extraction
PDB
help@deposit.rcsb.org
June 11, 2008
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.005
Three Conformational Snapshots of the Hepatitis C Virus NS3 Helicase Reveal a Ratchet Translocation Mechanism
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
A
THR
212
A
THR
24
HELX_P
A
GLN
221
A
GLN
33
1
1
10
A
SER
231
A
SER
43
HELX_P
A
GLY
247
A
GLY
59
1
2
17
A
TYR
270
A
TYR
82
HELX_P
A
ASP
276
A
ASP
88
1
3
7
A
ASP
296
A
ASP
108
HELX_P
A
GLY
314
A
GLY
126
1
4
19
A
PRO
355
A
PRO
167
HELX_P
A
ILE
359
A
ILE
171
5
5
5
A
LYS
371
A
LYS
183
HELX_P
A
GLY
383
A
GLY
195
1
6
13
A
ASP
396
A
ASP
208
HELX_P
A
ILE
400
A
ILE
212
5
7
5
A
ASP
454
A
ASP
266
HELX_P
A
GLY
463
A
GLY
275
1
8
10
A
ASP
487
A
ASP
299
HELX_P
A
TRP
501
A
TRP
313
1
9
15
A
THR
505
A
THR
317
HELX_P
A
ASN
518
A
ASN
330
1
10
14
A
HIS
528
A
HIS
340
HELX_P
A
LEU
539
A
LEU
351
1
11
12
A
ASP
543
A
ASP
355
HELX_P
A
ALA
553
A
ALA
365
1
12
11
A
PHE
557
A
PHE
369
HELX_P
A
ALA
571
A
ALA
383
1
13
15
A
ASP
579
A
ASP
391
HELX_P
A
LEU
592
A
LEU
404
5
14
14
A
HIS
613
A
HIS
425
HELX_P
A
MET
623
A
MET
435
1
15
11
B
SER
208
B
SER
20
HELX_P
B
SER
211
B
SER
23
5
16
4
B
THR
212
B
THR
24
HELX_P
B
ALA
220
B
ALA
32
1
17
9
B
SER
231
B
SER
43
HELX_P
B
HIS
246
B
HIS
58
1
18
16
B
TYR
270
B
TYR
82
HELX_P
B
ASP
276
B
ASP
88
1
19
7
B
ASP
296
B
ASP
108
HELX_P
B
GLY
314
B
GLY
126
1
20
19
B
SER
370
B
SER
182
HELX_P
B
LEU
381
B
LEU
193
1
21
12
B
SER
382
B
SER
194
HELX_P
B
GLY
385
B
GLY
197
5
22
4
B
ASP
396
B
ASP
208
HELX_P
B
ILE
400
B
ILE
212
5
23
5
B
ASP
454
B
ASP
266
HELX_P
B
GLY
463
B
GLY
275
1
24
10
B
ASP
487
B
ASP
299
HELX_P
B
TRP
501
B
TRP
313
1
25
15
B
THR
505
B
THR
317
HELX_P
B
THR
519
B
THR
331
1
26
15
B
HIS
528
B
HIS
340
HELX_P
B
GLY
538
B
GLY
350
1
27
11
B
ASP
543
B
ASP
355
HELX_P
B
GLY
554
B
GLY
366
1
28
12
B
PHE
557
B
PHE
369
HELX_P
B
GLN
572
B
GLN
384
1
29
16
B
ASP
579
B
ASP
391
HELX_P
B
LYS
589
B
LYS
401
5
30
11
B
HIS
613
B
HIS
425
HELX_P
B
SER
624
B
SER
436
1
31
12
HYDROLASE/DNA
helicase-substrate binary complex, HCV, NS3 protein, helicase, DNA-binding, HYDROLASE-DNA complex
A
ASP
441
A
ASP
253
1
A
PRO
442
A
PRO
254
-1.10
B
ASP
441
B
ASP
253
1
B
PRO
442
B
PRO
254
0.66
POLG_HCVCO
UNP
1
1215
Q9WMX2
SPPAVPQTFQVAHLHAPTGSGKSTKVPAAYAAQGYKVLVLNPSVAATLGFGAYMSKAHGIDPNIRTGVRTITTGAPITYS
TYGKFLADGGCSGGAYDIIICDECHSTDSTTILGIGTVLDQAETAGARLVVLATATPPGSVTVPHPNIEEVALSSTGEIP
FYGKAIPIETIKGGRHLIFCHSKKKCDELAAKLSGLGLNAVAYYRGLDVSVIPTSGDVIVVATDALMTGFTGDFDSVIDC
NTCVTQTVDFSLDPTFTIETTTVPQDAVSRSQRRGRTGRGRMGIYRFVTPGERPSGMFDSSVLCECYDAGCAWYELTPAE
TSVRLRAYLNTPGLPVCQDHLEFWESVFTGLTHIDAHFLSQTKQAGDNFPYLVAYQATVCARAQAPPPSWDQMWKCLIRL
KPTLHGPTPLLYRLGAVQNEVTTTHPITKYIMACMS
3KQK
PDB
2
3KQK
TTTTTT
1215
1650
3KQK
189
624
Q9WMX2
A
1
1
436
1215
1650
3KQK
189
624
Q9WMX2
B
1
1
436
1
6
3KQK
1
6
3KQK
C
2
1
6
1
6
3KQK
1
6
3KQK
D
2
1
6
7
6
2
2
7
6
2
2
parallel
parallel
parallel
parallel
parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
parallel
A
GLN
198
A
GLN
10
A
HIS
203
A
HIS
15
A
LEU
317
A
LEU
129
A
THR
322
A
THR
134
A
ILE
286
A
ILE
98
A
CYS
289
A
CYS
101
A
VAL
225
A
VAL
37
A
ASN
229
A
ASN
41
A
ILE
265
A
ILE
77
A
THR
269
A
THR
81
A
ASN
251
A
ASN
63
A
ARG
253
A
ARG
65
A
THR
258
A
THR
70
A
ILE
259
A
ILE
71
A
ILE
336
A
ILE
148
A
ALA
340
A
ALA
152
A
GLY
471
A
GLY
283
A
PHE
475
A
PHE
287
A
SER
424
A
SER
236
A
ASP
427
A
ASP
239
A
ARG
363
A
ARG
175
A
PHE
367
A
PHE
179
A
VAL
406
A
VAL
218
A
ALA
410
A
ALA
222
A
ALA
388
A
ALA
200
A
TYR
391
A
TYR
203
A
THR
430
A
THR
242
A
ASP
437
A
ASP
249
A
THR
445
A
THR
257
A
PRO
452
A
PRO
264
A
THR
596
A
THR
408
A
PRO
597
A
PRO
409
A
VAL
609
A
VAL
421
A
THR
610
A
THR
422
B
VAL
199
B
VAL
11
B
HIS
203
B
HIS
15
B
LEU
317
B
LEU
129
B
THR
322
B
THR
134
B
ILE
286
B
ILE
98
B
ASP
290
B
ASP
102
B
VAL
225
B
VAL
37
B
ASN
229
B
ASN
41
B
ILE
265
B
ILE
77
B
THR
269
B
THR
81
B
ASN
251
B
ASN
63
B
ARG
253
B
ARG
65
B
THR
258
B
THR
70
B
ILE
259
B
ILE
71
B
ILE
336
B
ILE
148
B
ALA
340
B
ALA
152
B
GLY
471
B
GLY
283
B
PHE
475
B
PHE
287
B
SER
424
B
SER
236
B
ASP
427
B
ASP
239
B
ARG
363
B
ARG
175
B
PHE
367
B
PHE
179
B
VAL
406
B
VAL
218
B
ALA
410
B
ALA
222
B
ALA
388
B
ALA
200
B
TYR
391
B
TYR
203
B
THR
430
B
THR
242
B
ASP
437
B
ASP
249
B
THR
445
B
THR
257
B
PRO
452
B
PRO
264
B
THR
596
B
THR
408
B
PRO
597
B
PRO
409
B
VAL
609
B
VAL
421
B
THR
610
B
THR
422
19
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