0.013759
0.000000
0.000000
0.000000
0.013759
0.000000
0.000000
0.000000
0.006370
0.000000
0.000000
0.000000
Joint Center for Structural Genomics (JCSG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.000
90.000
90.000
72.679
72.679
156.974
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
UNKNOWN LIGAND
non-polymer
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be published
0353
Crystal structure of Putative riboflavin biosynthesis protein (YP_001092907.1) from SHEWANELLA SP. PV-4 at 2.12 A resolution
10.2210/pdb3ky8/pdb
pdb_00003ky8
100
1
Flat mirror (vertical focusing)
CCD
2009-07-09
MARMOSAIC 325 mm CCD
Single crystal Si(111) bent monochromator (horizontal focusing)
MAD
M
x-ray
1
0.91837
1.0
0.97917
1.0
0.97870
1.0
BL11-1
SSRL
0.91837,0.97917,0.97870
SYNCHROTRON
SSRL BEAMLINE BL11-1
22497.621
Putative riboflavin biosynthesis protein
2
man
polymer
UNKNOWN LIGAND
4
syn
non-polymer
96.063
SULFATE ION
4
syn
non-polymer
92.094
GLYCEROL
4
syn
non-polymer
18.015
water
197
nat
water
Bifunctional deaminase-reductase domain protein
no
yes
(MSE)GSDKIHHHHHHENLYFQG(MSE)ANIVFIATSLDGYIADKRGKLDWLHSVPNPNNVDTGFVAL(MSE)ERVDGLV
(MSE)GRNTLD(MSE)VLSFDCDWPYSKPVFVLSNT(MSE)TEVPQGYEDKVFLVKGKLVDIIADLNAKGFNELYIDGGV
TIQNFLKEDLIDE(MSE)VITRFPILLGGGVPLFGELESSLSFNVIKSEVVLDSLTQTTYHRKRA
MGSDKIHHHHHHENLYFQGMANIVFIATSLDGYIADKRGKLDWLHSVPNPNNVDTGFVALMERVDGLVMGRNTLDMVLSF
DCDWPYSKPVFVLSNTMTEVPQGYEDKVFLVKGKLVDIIADLNAKGFNELYIDGGVTIQNFLKEDLIDEMVITRFPILLG
GGVPLFGELESSLSFNVIKSEVVLDSLTQTTYHRKRA
A,B
394242
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
ATCC BAA-1088 / PV-4
sample
Shew_0776
323850
Shewanella loihica
562
Escherichia Coli
HK100
Plasmid
SpeedET
1
2.30
46.60
VAPOR DIFFUSION, SITTING DROP
5.6
0.5000M (NH4)2SO4, 1.0000M Li2SO4, 0.1M Citrate pH 5.6, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K
277
Joint Center for Structural Genomics
JCSG
PSI, Protein Structure Initiative
pdbx_struct_assembly_auth_evidence
software
software
struct_conn
database_2
struct_ref_seq_dif
struct_site
repository
Initial release
Advisory
Version format compliance
Author supporting evidence
Refinement description
Data collection
Derived calculations
Refinement description
Database references
Derived calculations
1
0
2009-12-22
1
1
2011-07-13
1
2
2017-10-25
1
3
2019-07-17
1
4
2023-02-01
_software.classification
_software.name
_software.classification
_software.contact_author
_software.contact_author_email
_software.language
_software.location
_software.name
_software.type
_software.version
_struct_conn.pdbx_leaving_atom_flag
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
RCSB
Y
RCSB
2009-12-04
REL
REL
UNL
UNKNOWN LIGAND
SO4
SULFATE ION
GOL
GLYCEROL
HOH
water
THE CONSTRUCT (RESIDUES 1-178) WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG.
UNL
1
2
UNL
UNL
179
A
UNL
2
2
UNL
UNL
180
A
SO4
8
3
SO4
SO4
181
A
GOL
9
4
GOL
GOL
182
A
GOL
12
4
GOL
GOL
183
A
UNL
3
2
UNL
UNL
179
B
UNL
4
2
UNL
UNL
180
B
SO4
5
3
SO4
SO4
181
B
SO4
6
3
SO4
SO4
182
B
SO4
7
3
SO4
SO4
183
B
GOL
10
4
GOL
GOL
184
B
GOL
11
4
GOL
GOL
185
B
HOH
184
5
HOH
HOH
184
A
HOH
185
5
HOH
HOH
185
A
HOH
186
5
HOH
HOH
186
A
HOH
187
5
HOH
HOH
187
A
HOH
188
5
HOH
HOH
188
A
HOH
13
5
HOH
HOH
189
A
HOH
14
5
HOH
HOH
190
A
HOH
191
5
HOH
HOH
191
A
HOH
192
5
HOH
HOH
192
A
HOH
16
5
HOH
HOH
193
A
HOH
194
5
HOH
HOH
194
A
HOH
195
5
HOH
HOH
195
A
HOH
17
5
HOH
HOH
196
A
HOH
197
5
HOH
HOH
197
A
HOH
198
5
HOH
HOH
198
A
HOH
20
5
HOH
HOH
199
A
HOH
22
5
HOH
HOH
200
A
HOH
201
5
HOH
HOH
201
A
HOH
24
5
HOH
HOH
202
A
HOH
25
5
HOH
HOH
203
A
HOH
26
5
HOH
HOH
204
A
HOH
27
5
HOH
HOH
205
A
HOH
206
5
HOH
HOH
206
A
HOH
29
5
HOH
HOH
207
A
HOH
30
5
HOH
HOH
208
A
HOH
209
5
HOH
HOH
209
A
HOH
34
5
HOH
HOH
210
A
HOH
36
5
HOH
HOH
211
A
HOH
37
5
HOH
HOH
212
A
HOH
38
5
HOH
HOH
213
A
HOH
39
5
HOH
HOH
214
A
HOH
40
5
HOH
HOH
215
A
HOH
41
5
HOH
HOH
216
A
HOH
42
5
HOH
HOH
217
A
HOH
44
5
HOH
HOH
218
A
HOH
50
5
HOH
HOH
219
A
HOH
53
5
HOH
HOH
220
A
HOH
54
5
HOH
HOH
221
A
HOH
55
5
HOH
HOH
222
A
HOH
60
5
HOH
HOH
223
A
HOH
62
5
HOH
HOH
224
A
HOH
64
5
HOH
HOH
225
A
HOH
65
5
HOH
HOH
226
A
HOH
66
5
HOH
HOH
227
A
HOH
69
5
HOH
HOH
228
A
HOH
71
5
HOH
HOH
229
A
HOH
72
5
HOH
HOH
230
A
HOH
73
5
HOH
HOH
231
A
HOH
74
5
HOH
HOH
232
A
HOH
75
5
HOH
HOH
233
A
HOH
80
5
HOH
HOH
234
A
HOH
82
5
HOH
HOH
235
A
HOH
83
5
HOH
HOH
236
A
HOH
84
5
HOH
HOH
237
A
HOH
87
5
HOH
HOH
238
A
HOH
89
5
HOH
HOH
239
A
HOH
91
5
HOH
HOH
240
A
HOH
92
5
HOH
HOH
241
A
HOH
93
5
HOH
HOH
242
A
HOH
94
5
HOH
HOH
243
A
HOH
97
5
HOH
HOH
244
A
HOH
98
5
HOH
HOH
245
A
HOH
101
5
HOH
HOH
246
A
HOH
102
5
HOH
HOH
247
A
HOH
103
5
HOH
HOH
248
A
HOH
105
5
HOH
HOH
249
A
HOH
106
5
HOH
HOH
250
A
HOH
107
5
HOH
HOH
251
A
HOH
108
5
HOH
HOH
252
A
HOH
109
5
HOH
HOH
253
A
HOH
110
5
HOH
HOH
254
A
HOH
111
5
HOH
HOH
255
A
HOH
112
5
HOH
HOH
256
A
HOH
113
5
HOH
HOH
257
A
HOH
114
5
HOH
HOH
258
A
HOH
115
5
HOH
HOH
259
A
HOH
116
5
HOH
HOH
260
A
HOH
117
5
HOH
HOH
261
A
HOH
119
5
HOH
HOH
262
A
HOH
120
5
HOH
HOH
263
A
HOH
121
5
HOH
HOH
264
A
HOH
123
5
HOH
HOH
265
A
HOH
126
5
HOH
HOH
266
A
HOH
127
5
HOH
HOH
267
A
HOH
137
5
HOH
HOH
268
A
HOH
140
5
HOH
HOH
269
A
HOH
141
5
HOH
HOH
270
A
HOH
142
5
HOH
HOH
271
A
HOH
143
5
HOH
HOH
272
A
HOH
144
5
HOH
HOH
273
A
HOH
145
5
HOH
HOH
274
A
HOH
150
5
HOH
HOH
275
A
HOH
154
5
HOH
HOH
276
A
HOH
156
5
HOH
HOH
277
A
HOH
161
5
HOH
HOH
278
A
HOH
164
5
HOH
HOH
279
A
HOH
165
5
HOH
HOH
280
A
HOH
166
5
HOH
HOH
281
A
HOH
169
5
HOH
HOH
282
A
HOH
170
5
HOH
HOH
283
A
HOH
175
5
HOH
HOH
284
A
HOH
176
5
HOH
HOH
285
A
HOH
177
5
HOH
HOH
286
A
HOH
179
5
HOH
HOH
287
A
HOH
180
5
HOH
HOH
288
A
HOH
182
5
HOH
HOH
289
A
HOH
183
5
HOH
HOH
290
A
HOH
15
5
HOH
HOH
186
B
HOH
18
5
HOH
HOH
187
B
HOH
19
5
HOH
HOH
188
B
HOH
189
5
HOH
HOH
189
B
HOH
190
5
HOH
HOH
190
B
HOH
21
5
HOH
HOH
191
B
HOH
23
5
HOH
HOH
192
B
HOH
193
5
HOH
HOH
193
B
HOH
28
5
HOH
HOH
194
B
HOH
31
5
HOH
HOH
195
B
HOH
196
5
HOH
HOH
196
B
HOH
32
5
HOH
HOH
197
B
HOH
33
5
HOH
HOH
198
B
HOH
199
5
HOH
HOH
199
B
HOH
200
5
HOH
HOH
200
B
HOH
35
5
HOH
HOH
201
B
HOH
202
5
HOH
HOH
202
B
HOH
203
5
HOH
HOH
203
B
HOH
204
5
HOH
HOH
204
B
HOH
205
5
HOH
HOH
205
B
HOH
43
5
HOH
HOH
206
B
HOH
207
5
HOH
HOH
207
B
HOH
208
5
HOH
HOH
208
B
HOH
45
5
HOH
HOH
209
B
HOH
46
5
HOH
HOH
210
B
HOH
47
5
HOH
HOH
211
B
HOH
48
5
HOH
HOH
212
B
HOH
49
5
HOH
HOH
213
B
HOH
51
5
HOH
HOH
214
B
HOH
52
5
HOH
HOH
215
B
HOH
56
5
HOH
HOH
216
B
HOH
57
5
HOH
HOH
217
B
HOH
58
5
HOH
HOH
218
B
HOH
59
5
HOH
HOH
219
B
HOH
61
5
HOH
HOH
220
B
HOH
63
5
HOH
HOH
221
B
HOH
67
5
HOH
HOH
222
B
HOH
68
5
HOH
HOH
223
B
HOH
70
5
HOH
HOH
224
B
HOH
76
5
HOH
HOH
225
B
HOH
77
5
HOH
HOH
226
B
HOH
78
5
HOH
HOH
227
B
HOH
79
5
HOH
HOH
228
B
HOH
81
5
HOH
HOH
229
B
HOH
85
5
HOH
HOH
230
B
HOH
86
5
HOH
HOH
231
B
HOH
88
5
HOH
HOH
232
B
HOH
90
5
HOH
HOH
233
B
HOH
95
5
HOH
HOH
234
B
HOH
96
5
HOH
HOH
235
B
HOH
99
5
HOH
HOH
236
B
HOH
100
5
HOH
HOH
237
B
HOH
104
5
HOH
HOH
238
B
HOH
118
5
HOH
HOH
239
B
HOH
122
5
HOH
HOH
240
B
HOH
124
5
HOH
HOH
241
B
HOH
125
5
HOH
HOH
242
B
HOH
128
5
HOH
HOH
243
B
HOH
129
5
HOH
HOH
244
B
HOH
130
5
HOH
HOH
245
B
HOH
131
5
HOH
HOH
246
B
HOH
132
5
HOH
HOH
247
B
HOH
133
5
HOH
HOH
248
B
HOH
134
5
HOH
HOH
249
B
HOH
135
5
HOH
HOH
250
B
HOH
136
5
HOH
HOH
251
B
HOH
138
5
HOH
HOH
252
B
HOH
139
5
HOH
HOH
253
B
HOH
146
5
HOH
HOH
254
B
HOH
147
5
HOH
HOH
255
B
HOH
148
5
HOH
HOH
256
B
HOH
149
5
HOH
HOH
257
B
HOH
151
5
HOH
HOH
258
B
HOH
152
5
HOH
HOH
259
B
HOH
153
5
HOH
HOH
260
B
HOH
155
5
HOH
HOH
261
B
HOH
157
5
HOH
HOH
262
B
HOH
158
5
HOH
HOH
263
B
HOH
159
5
HOH
HOH
264
B
HOH
160
5
HOH
HOH
265
B
HOH
162
5
HOH
HOH
266
B
HOH
163
5
HOH
HOH
267
B
HOH
167
5
HOH
HOH
268
B
HOH
168
5
HOH
HOH
269
B
HOH
171
5
HOH
HOH
270
B
HOH
172
5
HOH
HOH
271
B
HOH
173
5
HOH
HOH
272
B
HOH
174
5
HOH
HOH
273
B
HOH
178
5
HOH
HOH
274
B
HOH
181
5
HOH
HOH
275
B
n
1
-18
A
n
2
-17
A
n
3
-16
A
n
4
-15
A
n
5
-14
A
n
6
-13
A
n
7
-12
A
n
8
-11
A
n
9
-10
A
n
10
-9
A
n
11
-8
A
n
12
-7
A
GLU
-6
n
13
GLU
-6
A
ASN
-5
n
14
ASN
-5
A
LEU
-4
n
15
LEU
-4
A
TYR
-3
n
16
TYR
-3
A
PHE
-2
n
17
PHE
-2
A
GLN
-1
n
18
GLN
-1
A
GLY
0
n
19
GLY
0
A
MSE
1
n
20
MSE
1
A
ALA
2
n
21
ALA
2
A
ASN
3
n
22
ASN
3
A
ILE
4
n
23
ILE
4
A
VAL
5
n
24
VAL
5
A
PHE
6
n
25
PHE
6
A
ILE
7
n
26
ILE
7
A
ALA
8
n
27
ALA
8
A
THR
9
n
28
THR
9
A
SER
10
n
29
SER
10
A
LEU
11
n
30
LEU
11
A
ASP
12
n
31
ASP
12
A
GLY
13
n
32
GLY
13
A
TYR
14
n
33
TYR
14
A
ILE
15
n
34
ILE
15
A
ALA
16
n
35
ALA
16
A
ASP
17
n
36
ASP
17
A
LYS
18
n
37
LYS
18
A
ARG
19
n
38
ARG
19
A
GLY
20
n
39
GLY
20
A
LYS
21
n
40
LYS
21
A
LEU
22
n
41
LEU
22
A
ASP
23
n
42
ASP
23
A
TRP
24
n
43
TRP
24
A
LEU
25
n
44
LEU
25
A
HIS
26
n
45
HIS
26
A
SER
27
n
46
SER
27
A
VAL
28
n
47
VAL
28
A
PRO
29
n
48
PRO
29
A
ASN
30
n
49
ASN
30
A
PRO
31
n
50
PRO
31
A
ASN
32
n
51
ASN
32
A
ASN
33
n
52
ASN
33
A
VAL
34
n
53
VAL
34
A
ASP
35
n
54
ASP
35
A
THR
36
n
55
THR
36
A
GLY
37
n
56
GLY
37
A
PHE
38
n
57
PHE
38
A
VAL
39
n
58
VAL
39
A
ALA
40
n
59
ALA
40
A
LEU
41
n
60
LEU
41
A
MSE
42
n
61
MSE
42
A
GLU
43
n
62
GLU
43
A
ARG
44
n
63
ARG
44
A
VAL
45
n
64
VAL
45
A
ASP
46
n
65
ASP
46
A
GLY
47
n
66
GLY
47
A
LEU
48
n
67
LEU
48
A
VAL
49
n
68
VAL
49
A
MSE
50
n
69
MSE
50
A
GLY
51
n
70
GLY
51
A
ARG
52
n
71
ARG
52
A
ASN
53
n
72
ASN
53
A
THR
54
n
73
THR
54
A
LEU
55
n
74
LEU
55
A
ASP
56
n
75
ASP
56
A
MSE
57
n
76
MSE
57
A
VAL
58
n
77
VAL
58
A
LEU
59
n
78
LEU
59
A
SER
60
n
79
SER
60
A
PHE
61
n
80
PHE
61
A
ASP
62
n
81
ASP
62
A
CYS
63
n
82
CYS
63
A
ASP
64
n
83
ASP
64
A
TRP
65
n
84
TRP
65
A
PRO
66
n
85
PRO
66
A
TYR
67
n
86
TYR
67
A
SER
68
n
87
SER
68
A
LYS
69
n
88
LYS
69
A
PRO
70
n
89
PRO
70
A
VAL
71
n
90
VAL
71
A
PHE
72
n
91
PHE
72
A
VAL
73
n
92
VAL
73
A
LEU
74
n
93
LEU
74
A
SER
75
n
94
SER
75
A
ASN
76
n
95
ASN
76
A
THR
77
n
96
THR
77
A
MSE
78
n
97
MSE
78
A
THR
79
n
98
THR
79
A
GLU
80
n
99
GLU
80
A
VAL
81
n
100
VAL
81
A
PRO
82
n
101
PRO
82
A
GLN
83
n
102
GLN
83
A
GLY
84
n
103
GLY
84
A
TYR
85
n
104
TYR
85
A
GLU
86
n
105
GLU
86
A
ASP
87
n
106
ASP
87
A
LYS
88
n
107
LYS
88
A
VAL
89
n
108
VAL
89
A
PHE
90
n
109
PHE
90
A
LEU
91
n
110
LEU
91
A
VAL
92
n
111
VAL
92
A
LYS
93
n
112
LYS
93
A
GLY
94
n
113
GLY
94
A
LYS
95
n
114
LYS
95
A
LEU
96
n
115
LEU
96
A
VAL
97
n
116
VAL
97
A
ASP
98
n
117
ASP
98
A
ILE
99
n
118
ILE
99
A
ILE
100
n
119
ILE
100
A
ALA
101
n
120
ALA
101
A
ASP
102
n
121
ASP
102
A
LEU
103
n
122
LEU
103
A
ASN
104
n
123
ASN
104
A
ALA
105
n
124
ALA
105
A
LYS
106
n
125
LYS
106
A
GLY
107
n
126
GLY
107
A
PHE
108
n
127
PHE
108
A
ASN
109
n
128
ASN
109
A
GLU
110
n
129
GLU
110
A
LEU
111
n
130
LEU
111
A
TYR
112
n
131
TYR
112
A
ILE
113
n
132
ILE
113
A
ASP
114
n
133
ASP
114
A
GLY
115
n
134
GLY
115
A
GLY
116
n
135
GLY
116
A
VAL
117
n
136
VAL
117
A
THR
118
n
137
THR
118
A
ILE
119
n
138
ILE
119
A
GLN
120
n
139
GLN
120
A
ASN
121
n
140
ASN
121
A
PHE
122
n
141
PHE
122
A
LEU
123
n
142
LEU
123
A
LYS
124
n
143
LYS
124
A
GLU
125
n
144
GLU
125
A
ASP
126
n
145
ASP
126
A
LEU
127
n
146
LEU
127
A
ILE
128
n
147
ILE
128
A
ASP
129
n
148
ASP
129
A
GLU
130
n
149
GLU
130
A
MSE
131
n
150
MSE
131
A
VAL
132
n
151
VAL
132
A
ILE
133
n
152
ILE
133
A
THR
134
n
153
THR
134
A
ARG
135
n
154
ARG
135
A
PHE
136
n
155
PHE
136
A
PRO
137
n
156
PRO
137
A
ILE
138
n
157
ILE
138
A
LEU
139
n
158
LEU
139
A
LEU
140
n
159
LEU
140
A
GLY
141
n
160
GLY
141
A
GLY
142
n
161
GLY
142
A
GLY
143
n
162
GLY
143
A
VAL
144
n
163
VAL
144
A
PRO
145
n
164
PRO
145
A
LEU
146
n
165
LEU
146
A
PHE
147
n
166
PHE
147
A
GLY
148
n
167
GLY
148
A
GLU
149
n
168
GLU
149
A
LEU
150
n
169
LEU
150
A
GLU
151
n
170
GLU
151
A
SER
152
n
171
SER
152
A
SER
153
n
172
SER
153
A
LEU
154
n
173
LEU
154
A
SER
155
n
174
SER
155
A
PHE
156
n
175
PHE
156
A
ASN
157
n
176
ASN
157
A
VAL
158
n
177
VAL
158
A
ILE
159
n
178
ILE
159
A
LYS
160
n
179
LYS
160
A
SER
161
n
180
SER
161
A
GLU
162
n
181
GLU
162
A
VAL
163
n
182
VAL
163
A
VAL
164
n
183
VAL
164
A
LEU
165
n
184
LEU
165
A
ASP
166
n
185
ASP
166
A
SER
167
n
186
SER
167
A
LEU
168
n
187
LEU
168
A
THR
169
n
188
THR
169
A
GLN
170
n
189
GLN
170
A
THR
171
n
190
THR
171
A
THR
172
n
191
THR
172
A
TYR
173
n
192
TYR
173
A
HIS
174
n
193
HIS
174
A
ARG
175
n
194
ARG
175
A
LYS
176
n
195
LYS
176
A
ARG
177
n
196
ARG
177
A
n
197
178
A
n
1
-18
B
n
2
-17
B
n
3
-16
B
n
4
-15
B
n
5
-14
B
n
6
-13
B
n
7
-12
B
n
8
-11
B
n
9
-10
B
n
10
-9
B
n
11
-8
B
n
12
-7
B
n
13
-6
B
n
14
-5
B
n
15
-4
B
n
16
-3
B
n
17
-2
B
n
18
-1
B
n
19
0
B
MSE
1
n
20
MSE
1
B
ALA
2
n
21
ALA
2
B
ASN
3
n
22
ASN
3
B
ILE
4
n
23
ILE
4
B
VAL
5
n
24
VAL
5
B
PHE
6
n
25
PHE
6
B
ILE
7
n
26
ILE
7
B
ALA
8
n
27
ALA
8
B
THR
9
n
28
THR
9
B
SER
10
n
29
SER
10
B
LEU
11
n
30
LEU
11
B
ASP
12
n
31
ASP
12
B
GLY
13
n
32
GLY
13
B
TYR
14
n
33
TYR
14
B
ILE
15
n
34
ILE
15
B
ALA
16
n
35
ALA
16
B
ASP
17
n
36
ASP
17
B
LYS
18
n
37
LYS
18
B
ARG
19
n
38
ARG
19
B
GLY
20
n
39
GLY
20
B
LYS
21
n
40
LYS
21
B
LEU
22
n
41
LEU
22
B
ASP
23
n
42
ASP
23
B
TRP
24
n
43
TRP
24
B
LEU
25
n
44
LEU
25
B
HIS
26
n
45
HIS
26
B
SER
27
n
46
SER
27
B
VAL
28
n
47
VAL
28
B
PRO
29
n
48
PRO
29
B
ASN
30
n
49
ASN
30
B
PRO
31
n
50
PRO
31
B
ASN
32
n
51
ASN
32
B
ASN
33
n
52
ASN
33
B
VAL
34
n
53
VAL
34
B
ASP
35
n
54
ASP
35
B
THR
36
n
55
THR
36
B
GLY
37
n
56
GLY
37
B
PHE
38
n
57
PHE
38
B
VAL
39
n
58
VAL
39
B
ALA
40
n
59
ALA
40
B
LEU
41
n
60
LEU
41
B
MSE
42
n
61
MSE
42
B
GLU
43
n
62
GLU
43
B
ARG
44
n
63
ARG
44
B
VAL
45
n
64
VAL
45
B
ASP
46
n
65
ASP
46
B
GLY
47
n
66
GLY
47
B
LEU
48
n
67
LEU
48
B
VAL
49
n
68
VAL
49
B
MSE
50
n
69
MSE
50
B
GLY
51
n
70
GLY
51
B
ARG
52
n
71
ARG
52
B
ASN
53
n
72
ASN
53
B
THR
54
n
73
THR
54
B
LEU
55
n
74
LEU
55
B
ASP
56
n
75
ASP
56
B
MSE
57
n
76
MSE
57
B
VAL
58
n
77
VAL
58
B
LEU
59
n
78
LEU
59
B
SER
60
n
79
SER
60
B
PHE
61
n
80
PHE
61
B
ASP
62
n
81
ASP
62
B
CYS
63
n
82
CYS
63
B
ASP
64
n
83
ASP
64
B
TRP
65
n
84
TRP
65
B
PRO
66
n
85
PRO
66
B
TYR
67
n
86
TYR
67
B
SER
68
n
87
SER
68
B
LYS
69
n
88
LYS
69
B
PRO
70
n
89
PRO
70
B
VAL
71
n
90
VAL
71
B
PHE
72
n
91
PHE
72
B
VAL
73
n
92
VAL
73
B
LEU
74
n
93
LEU
74
B
SER
75
n
94
SER
75
B
ASN
76
n
95
ASN
76
B
THR
77
n
96
THR
77
B
MSE
78
n
97
MSE
78
B
THR
79
n
98
THR
79
B
GLU
80
n
99
GLU
80
B
VAL
81
n
100
VAL
81
B
PRO
82
n
101
PRO
82
B
GLN
83
n
102
GLN
83
B
GLY
84
n
103
GLY
84
B
TYR
85
n
104
TYR
85
B
GLU
86
n
105
GLU
86
B
ASP
87
n
106
ASP
87
B
LYS
88
n
107
LYS
88
B
VAL
89
n
108
VAL
89
B
PHE
90
n
109
PHE
90
B
LEU
91
n
110
LEU
91
B
VAL
92
n
111
VAL
92
B
LYS
93
n
112
LYS
93
B
GLY
94
n
113
GLY
94
B
LYS
95
n
114
LYS
95
B
LEU
96
n
115
LEU
96
B
VAL
97
n
116
VAL
97
B
ASP
98
n
117
ASP
98
B
ILE
99
n
118
ILE
99
B
ILE
100
n
119
ILE
100
B
ALA
101
n
120
ALA
101
B
ASP
102
n
121
ASP
102
B
LEU
103
n
122
LEU
103
B
ASN
104
n
123
ASN
104
B
ALA
105
n
124
ALA
105
B
LYS
106
n
125
LYS
106
B
GLY
107
n
126
GLY
107
B
PHE
108
n
127
PHE
108
B
ASN
109
n
128
ASN
109
B
GLU
110
n
129
GLU
110
B
LEU
111
n
130
LEU
111
B
TYR
112
n
131
TYR
112
B
ILE
113
n
132
ILE
113
B
ASP
114
n
133
ASP
114
B
GLY
115
n
134
GLY
115
B
GLY
116
n
135
GLY
116
B
VAL
117
n
136
VAL
117
B
THR
118
n
137
THR
118
B
ILE
119
n
138
ILE
119
B
GLN
120
n
139
GLN
120
B
ASN
121
n
140
ASN
121
B
PHE
122
n
141
PHE
122
B
LEU
123
n
142
LEU
123
B
LYS
124
n
143
LYS
124
B
GLU
125
n
144
GLU
125
B
ASP
126
n
145
ASP
126
B
LEU
127
n
146
LEU
127
B
ILE
128
n
147
ILE
128
B
ASP
129
n
148
ASP
129
B
GLU
130
n
149
GLU
130
B
MSE
131
n
150
MSE
131
B
VAL
132
n
151
VAL
132
B
ILE
133
n
152
ILE
133
B
THR
134
n
153
THR
134
B
ARG
135
n
154
ARG
135
B
PHE
136
n
155
PHE
136
B
PRO
137
n
156
PRO
137
B
ILE
138
n
157
ILE
138
B
LEU
139
n
158
LEU
139
B
LEU
140
n
159
LEU
140
B
GLY
141
n
160
GLY
141
B
GLY
142
n
161
GLY
142
B
GLY
143
n
162
GLY
143
B
VAL
144
n
163
VAL
144
B
PRO
145
n
164
PRO
145
B
LEU
146
n
165
LEU
146
B
PHE
147
n
166
PHE
147
B
GLY
148
n
167
GLY
148
B
GLU
149
n
168
GLU
149
B
LEU
150
n
169
LEU
150
B
GLU
151
n
170
GLU
151
B
SER
152
n
171
SER
152
B
SER
153
n
172
SER
153
B
LEU
154
n
173
LEU
154
B
SER
155
n
174
SER
155
B
PHE
156
n
175
PHE
156
B
ASN
157
n
176
ASN
157
B
VAL
158
n
177
VAL
158
B
ILE
159
n
178
ILE
159
B
LYS
160
n
179
LYS
160
B
SER
161
n
180
SER
161
B
GLU
162
n
181
GLU
162
B
VAL
163
n
182
VAL
163
B
VAL
164
n
183
VAL
164
B
LEU
165
n
184
LEU
165
B
ASP
166
n
185
ASP
166
B
SER
167
n
186
SER
167
B
LEU
168
n
187
LEU
168
B
THR
169
n
188
THR
169
B
GLN
170
n
189
GLN
170
B
THR
171
n
190
THR
171
B
THR
172
n
191
THR
172
B
TYR
173
n
192
TYR
173
B
HIS
174
n
193
HIS
174
B
ARG
175
n
194
ARG
175
B
LYS
176
n
195
LYS
176
B
ARG
177
n
196
ARG
177
B
n
197
178
B
1.3919
-0.1582
-0.3057
0.8889
0.3108
1.2695
0.0042
-0.1060
0.0205
0.0517
0.0320
0.0269
0.0356
-0.0884
-0.0362
-0.0475
0.0197
-0.0167
-0.1097
0.0225
-0.0954
refined
12.3130
22.3774
62.6231
X-RAY DIFFRACTION
0.8282
-0.5436
-1.0169
1.4269
0.6374
1.2518
0.0009
0.0294
0.0208
-0.1371
0.0159
-0.1212
-0.0643
0.1001
-0.0168
-0.0443
0.0140
-0.0029
-0.0609
0.0009
-0.0705
refined
31.0194
10.8320
39.7749
X-RAY DIFFRACTION
A
-6
A
177
X-RAY DIFFRACTION
1
B
1
B
177
X-RAY DIFFRACTION
2
author_and_software_defined_assembly
PISA
2
dimeric
gel filtration
light scattering
6040
-90
17660
A
MSE
1
SELENOMETHIONINE
A
MSE
20
MET
A
MSE
42
SELENOMETHIONINE
A
MSE
61
MET
A
MSE
50
SELENOMETHIONINE
A
MSE
69
MET
A
MSE
57
SELENOMETHIONINE
A
MSE
76
MET
A
MSE
78
SELENOMETHIONINE
A
MSE
97
MET
A
MSE
131
SELENOMETHIONINE
A
MSE
150
MET
B
MSE
1
SELENOMETHIONINE
B
MSE
20
MET
B
MSE
42
SELENOMETHIONINE
B
MSE
61
MET
B
MSE
50
SELENOMETHIONINE
B
MSE
69
MET
B
MSE
57
SELENOMETHIONINE
B
MSE
76
MET
B
MSE
78
SELENOMETHIONINE
B
MSE
97
MET
B
MSE
131
SELENOMETHIONINE
B
MSE
150
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
PHE
90
A
O
PHE
109
A
N
VAL
71
A
N
VAL
90
A
O
PHE
72
A
O
PHE
91
A
N
LEU
48
A
N
LEU
67
A
N
VAL
49
A
N
VAL
68
A
O
ASP
114
A
O
ASP
133
A
O
LEU
111
A
O
LEU
130
A
N
ILE
4
A
N
ILE
23
A
N
THR
9
A
N
THR
28
A
O
PHE
136
A
O
PHE
155
A
N
MSE
131
A
N
MSE
150
A
O
TYR
173
A
O
TYR
192
A
O
HIS
174
A
O
HIS
193
A
N
ASN
157
A
N
ASN
176
A
N
LEU
154
A
N
LEU
173
B
O
LEU
139
B
O
LEU
158
A
N
ILE
15
A
N
ILE
34
A
O
VAL
144
A
O
VAL
163
A
N
LEU
139
A
N
LEU
158
B
O
LEU
154
B
O
LEU
173
B
N
GLU
162
B
N
GLU
181
B
O
GLN
170
B
O
GLN
189
B
O
TYR
173
B
O
TYR
192
B
N
MSE
131
B
N
MSE
150
B
O
VAL
132
B
O
VAL
151
B
N
VAL
5
B
N
VAL
24
B
N
ILE
4
B
N
ILE
23
B
O
LEU
111
B
O
LEU
130
B
O
TYR
112
B
O
TYR
131
B
N
VAL
49
B
N
VAL
68
B
N
LEU
48
B
N
LEU
67
B
O
PHE
72
B
O
PHE
91
B
N
VAL
73
B
N
VAL
92
B
O
PHE
90
B
O
PHE
109
B
N
ILE
15
B
N
ILE
34
B
O
VAL
144
B
O
VAL
163
1
A
NZ
LYS
18
A
NZ
LYS
37
1
Y
1
A
CZ
ARG
52
A
CZ
ARG
71
1
Y
1
A
NH1
ARG
52
A
NH1
ARG
71
1
Y
1
A
NH2
ARG
52
A
NH2
ARG
71
1
Y
1
A
CG
ASP
62
A
CG
ASP
81
1
Y
1
A
OD1
ASP
62
A
OD1
ASP
81
1
Y
1
A
OD2
ASP
62
A
OD2
ASP
81
1
Y
1
A
OG1
THR
77
A
OG1
THR
96
1
Y
1
A
CG2
THR
77
A
CG2
THR
96
1
Y
1
A
OG1
THR
79
A
OG1
THR
98
1
Y
1
A
CG2
THR
79
A
CG2
THR
98
1
Y
1
A
CG
LYS
93
A
CG
LYS
112
1
Y
1
A
CD
LYS
93
A
CD
LYS
112
1
Y
1
A
CE
LYS
93
A
CE
LYS
112
1
Y
1
A
NZ
LYS
93
A
NZ
LYS
112
1
Y
1
B
CE
LYS
21
B
CE
LYS
40
1
Y
1
B
NZ
LYS
21
B
NZ
LYS
40
1
Y
1
B
CG
LYS
93
B
CG
LYS
112
1
Y
1
B
CD
LYS
93
B
CD
LYS
112
1
Y
1
B
CE
LYS
93
B
CE
LYS
112
1
Y
1
B
NZ
LYS
93
B
NZ
LYS
112
1
Y
1
B
CE
LYS
95
B
CE
LYS
114
1
Y
1
B
NZ
LYS
95
B
NZ
LYS
114
1
Y
1
B
CE
LYS
124
B
CE
LYS
143
1
Y
1
B
NZ
LYS
124
B
NZ
LYS
143
1
Y
1
B
CD
ARG
177
B
CD
ARG
196
1
Y
1
B
NE
ARG
177
B
NE
ARG
196
1
Y
1
B
CZ
ARG
177
B
CZ
ARG
196
1
Y
1
B
NH1
ARG
177
B
NH1
ARG
196
1
Y
1
B
NH2
ARG
177
B
NH2
ARG
196
1
Y
1
A
MSE
-18
A
MSE
1
1
Y
1
A
GLY
-17
A
GLY
2
1
Y
1
A
SER
-16
A
SER
3
1
Y
1
A
ASP
-15
A
ASP
4
1
Y
1
A
LYS
-14
A
LYS
5
1
Y
1
A
ILE
-13
A
ILE
6
1
Y
1
A
HIS
-12
A
HIS
7
1
Y
1
A
HIS
-11
A
HIS
8
1
Y
1
A
HIS
-10
A
HIS
9
1
Y
1
A
HIS
-9
A
HIS
10
1
Y
1
A
HIS
-8
A
HIS
11
1
Y
1
A
HIS
-7
A
HIS
12
1
Y
1
A
ALA
178
A
ALA
197
1
Y
1
B
MSE
-18
B
MSE
1
1
Y
1
B
GLY
-17
B
GLY
2
1
Y
1
B
SER
-16
B
SER
3
1
Y
1
B
ASP
-15
B
ASP
4
1
Y
1
B
LYS
-14
B
LYS
5
1
Y
1
B
ILE
-13
B
ILE
6
1
Y
1
B
HIS
-12
B
HIS
7
1
Y
1
B
HIS
-11
B
HIS
8
1
Y
1
B
HIS
-10
B
HIS
9
1
Y
1
B
HIS
-9
B
HIS
10
1
Y
1
B
HIS
-8
B
HIS
11
1
Y
1
B
HIS
-7
B
HIS
12
1
Y
1
B
GLU
-6
B
GLU
13
1
Y
1
B
ASN
-5
B
ASN
14
1
Y
1
B
LEU
-4
B
LEU
15
1
Y
1
B
TYR
-3
B
TYR
16
1
Y
1
B
PHE
-2
B
PHE
17
1
Y
1
B
GLN
-1
B
GLN
18
1
Y
1
B
GLY
0
B
GLY
19
1
Y
1
B
ALA
178
B
ALA
197
1
Y
1
8.40
0.90
118.30
126.70
A
A
A
CB
CG
OD1
ASP
ASP
ASP
12
12
12
N
1
-6.47
0.90
118.30
111.83
A
A
A
CB
CG
OD2
ASP
ASP
ASP
12
12
12
N
1
3.12
0.50
120.30
123.42
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
52
52
52
N
1
A
ASP
166
68.75
-32.02
1
B
ASN
30
-152.21
61.95
1
B
LYS
160
-170.23
141.10
1
B
ASP
166
65.54
-35.74
90.03
37.954
15.68
1.430
0.000
0.000
1.430
0.000
-2.860
0.962
0.945
1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. SULFATE (SO4) IONS AND GLYCEROL (GOL) MOLECULES ARE MODELED BASED ON CRYSTALLIZATION CONDITION. 5. UNIDENTIFIED LIGANDS (UNL) HAVE BEEN MODELED IN ELECTRON DENSITY FOUND NEAR THE PUTATIVE ACTIVE SITES.
0.231
0.181
0.184
2.120
30.029
1256
24610
5.100
99.690
1.00
0.37
10.193
0.139
RANDOM
LIKELY RESIDUAL
1
THROUGHOUT
0.00
MAD
0.210
0.182
0.800
0.800
1.200
MAXIMUM LIKELIHOOD WITH PHASES
MASK
2.120
30.029
197
3084
76
0
2811
0.016
0.022
2940
0.002
0.020
1921
1.590
1.982
3994
0.961
3.000
4720
6.427
5.000
367
39.495
25.312
128
14.800
15.000
493
11.108
15.000
10
0.094
0.200
458
0.006
0.020
3244
0.001
0.020
570
0.250
0.200
473
0.199
0.200
1947
0.178
0.200
1408
0.088
0.200
1581
0.153
0.200
141
0.211
0.200
31
0.229
0.200
65
0.209
0.200
13
1.983
3.000
1877
0.675
3.000
743
2.865
5.000
2943
4.916
8.000
1218
6.566
11.000
1051
1
A
1
2202
X-RAY DIFFRACTION
MEDIUM POSITIONAL
0.720
0.500
1
A
1
2202
X-RAY DIFFRACTION
MEDIUM THERMAL
1.300
2.000
0.317
0.254
2.175
82
1686
1768
20
99.490
35.549
2.12
30.029
3KY8
24676
-3.00
0.096
1
11.700
99.600
0.948
2.12
2.20
1.5
17588
4765
1
99.20
0.769
2.20
2.28
2.0
15836
4140
1
99.30
0.634
2.28
2.39
2.4
18413
4788
1
99.50
0.465
2.39
2.51
3.2
16865
4373
1
99.90
0.362
2.51
2.67
4.1
17749
4589
1
99.70
0.228
2.67
2.88
6.2
17926
4640
1
99.80
0.131
2.88
3.16
10.3
17126
4421
1
99.80
0.069
3.16
3.62
18.3
17829
4595
1
99.90
0.037
3.62
4.55
30.4
17713
4559
1
99.90
0.029
4.55
30.029
37.9
17902
4615
1
99.40
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
5.2.0019
refinement
P.D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
phasing
George M. Sheldrick
gsheldr@shelx.uni-ac.gwdg.de
Fortran_77
http://shelx.uni-ac.gwdg.de/SHELX/
SHELX
package
model building
D.C. & J.S. Richardson lab
molprobity@kinemage.biochem.duke.edu
http://kinemage.biochem.duke.edu/molprobity/
MolProbity
package
3beta29
data scaling
Wolfgang Kabsch
http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html
XSCALE
package
data extraction
PDB
help@deposit.rcsb.org
June 11, 2008
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.006
data reduction
XDS
phasing
SHELXD
phasing
autoSHARP
Crystal structure of Putative riboflavin biosynthesis protein (YP_001092907.1) from SHEWANELLA SP. PV-4 at 2.12 A resolution
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
4
N
N
4
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
4
N
N
4
N
N
5
N
N
5
N
N
CRYSTAL PACKING AND ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY COUPLED WITH STATIC LIGHT SCATTERING SUPPORT THE ASSIGNMENT OF A DIMER AS A SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION.
A
LEU
22
A
LEU
41
HELX_P
A
VAL
28
A
VAL
47
5
1
7
A
GLY
37
A
GLY
56
HELX_P
A
VAL
45
A
VAL
64
1
2
9
A
ARG
52
A
ARG
71
HELX_P
A
LEU
59
A
LEU
78
1
3
8
A
LYS
95
A
LYS
114
HELX_P
A
LYS
106
A
LYS
125
1
4
12
A
GLY
115
A
GLY
134
HELX_P
A
GLU
125
A
GLU
144
1
5
11
B
LEU
22
B
LEU
41
HELX_P
B
VAL
28
B
VAL
47
5
6
7
B
GLY
37
B
GLY
56
HELX_P
B
VAL
45
B
VAL
64
1
7
9
B
GLY
51
B
GLY
70
HELX_P
B
PHE
61
B
PHE
80
1
8
11
B
LYS
95
B
LYS
114
HELX_P
B
LYS
106
B
LYS
125
1
9
12
B
GLY
115
B
GLY
134
HELX_P
B
GLU
125
B
GLU
144
1
10
11
covale
1.328
both
A
MSE
1
A
C
MSE
20
1_555
A
ALA
2
A
N
ALA
21
1_555
covale
1.328
both
A
MSE
42
A
C
MSE
61
1_555
A
GLU
43
A
N
GLU
62
1_555
covale
1.323
both
A
MSE
50
A
C
MSE
69
1_555
A
GLY
51
A
N
GLY
70
1_555
covale
1.323
both
A
MSE
57
A
C
MSE
76
1_555
A
VAL
58
A
N
VAL
77
1_555
covale
1.320
both
A
MSE
78
A
C
MSE
97
1_555
A
THR
79
A
N
THR
98
1_555
covale
1.329
both
A
MSE
131
A
C
MSE
150
1_555
A
VAL
132
A
N
VAL
151
1_555
covale
1.323
both
B
MSE
1
B
C
MSE
20
1_555
B
ALA
2
B
N
ALA
21
1_555
covale
1.327
both
B
MSE
42
B
C
MSE
61
1_555
B
GLU
43
B
N
GLU
62
1_555
covale
1.329
both
B
MSE
50
B
C
MSE
69
1_555
B
GLY
51
B
N
GLY
70
1_555
covale
1.333
both
A
B
MSE
57
B
C
MSE
76
1_555
B
VAL
58
B
N
VAL
77
1_555
covale
1.330
both
B
B
MSE
57
B
C
MSE
76
1_555
B
VAL
58
B
N
VAL
77
1_555
covale
1.332
both
B
MSE
78
B
C
MSE
97
1_555
B
THR
79
B
N
THR
98
1_555
covale
1.326
both
B
MSE
131
B
C
MSE
150
1_555
B
VAL
132
B
N
VAL
151
1_555
BIOSYNTHETIC PROTEIN
Putative riboflavin biosynthesis protein, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, BIOSYNTHETIC PROTEIN
A
B
A
1
A
176
4
B
1
B
176
4
A3QB00_SHELP
UNP
1
1
A3QB00
MANIVFIATSLDGYIADKRGKLDWLHSVPNPNNVDTGFVALMERVDGLVMGRNTLDMVLSFDCDWPYSKPVFVLSNTMTE
VPQGYEDKVFLVKGKLVDIIADLNAKGFNELYIDGGVTIQNFLKEDLIDEMVITRFPILLGGGVPLFGELESSLSFNVIK
SEVVLDSLTQTTYHRKRA
1
178
3KY8
1
178
A3QB00
A
1
20
197
1
178
3KY8
1
178
A3QB00
B
1
20
197
1
expression tag
MSE
-18
3KY8
A
A3QB00
UNP
1
1
expression tag
GLY
-17
3KY8
A
A3QB00
UNP
2
1
expression tag
SER
-16
3KY8
A
A3QB00
UNP
3
1
expression tag
ASP
-15
3KY8
A
A3QB00
UNP
4
1
expression tag
LYS
-14
3KY8
A
A3QB00
UNP
5
1
expression tag
ILE
-13
3KY8
A
A3QB00
UNP
6
1
expression tag
HIS
-12
3KY8
A
A3QB00
UNP
7
1
expression tag
HIS
-11
3KY8
A
A3QB00
UNP
8
1
expression tag
HIS
-10
3KY8
A
A3QB00
UNP
9
1
expression tag
HIS
-9
3KY8
A
A3QB00
UNP
10
1
expression tag
HIS
-8
3KY8
A
A3QB00
UNP
11
1
expression tag
HIS
-7
3KY8
A
A3QB00
UNP
12
1
expression tag
GLU
-6
3KY8
A
A3QB00
UNP
13
1
expression tag
ASN
-5
3KY8
A
A3QB00
UNP
14
1
expression tag
LEU
-4
3KY8
A
A3QB00
UNP
15
1
expression tag
TYR
-3
3KY8
A
A3QB00
UNP
16
1
expression tag
PHE
-2
3KY8
A
A3QB00
UNP
17
1
expression tag
GLN
-1
3KY8
A
A3QB00
UNP
18
1
expression tag
GLY
0
3KY8
A
A3QB00
UNP
19
2
expression tag
MSE
-18
3KY8
B
A3QB00
UNP
1
2
expression tag
GLY
-17
3KY8
B
A3QB00
UNP
2
2
expression tag
SER
-16
3KY8
B
A3QB00
UNP
3
2
expression tag
ASP
-15
3KY8
B
A3QB00
UNP
4
2
expression tag
LYS
-14
3KY8
B
A3QB00
UNP
5
2
expression tag
ILE
-13
3KY8
B
A3QB00
UNP
6
2
expression tag
HIS
-12
3KY8
B
A3QB00
UNP
7
2
expression tag
HIS
-11
3KY8
B
A3QB00
UNP
8
2
expression tag
HIS
-10
3KY8
B
A3QB00
UNP
9
2
expression tag
HIS
-9
3KY8
B
A3QB00
UNP
10
2
expression tag
HIS
-8
3KY8
B
A3QB00
UNP
11
2
expression tag
HIS
-7
3KY8
B
A3QB00
UNP
12
2
expression tag
GLU
-6
3KY8
B
A3QB00
UNP
13
2
expression tag
ASN
-5
3KY8
B
A3QB00
UNP
14
2
expression tag
LEU
-4
3KY8
B
A3QB00
UNP
15
2
expression tag
TYR
-3
3KY8
B
A3QB00
UNP
16
2
expression tag
PHE
-2
3KY8
B
A3QB00
UNP
17
2
expression tag
GLN
-1
3KY8
B
A3QB00
UNP
18
2
expression tag
GLY
0
3KY8
B
A3QB00
UNP
19
9
2
9
2
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
A
VAL
89
A
VAL
108
A
VAL
92
A
VAL
111
A
VAL
71
A
VAL
90
A
LEU
74
A
LEU
93
A
GLY
47
A
GLY
66
A
GLY
51
A
GLY
70
A
GLU
110
A
GLU
129
A
ASP
114
A
ASP
133
A
ALA
2
A
ALA
21
A
SER
10
A
SER
29
A
GLU
130
A
GLU
149
A
PHE
136
A
PHE
155
A
LEU
168
A
LEU
187
A
ARG
175
A
ARG
194
A
LEU
154
A
LEU
173
A
VAL
164
A
VAL
183
B
ILE
138
B
ILE
157
B
LEU
139
B
LEU
158
A
TYR
14
A
TYR
33
A
ALA
16
A
ALA
35
A
VAL
144
A
VAL
163
A
PRO
145
A
PRO
164
A
ILE
138
A
ILE
157
A
LEU
139
A
LEU
158
B
LEU
154
B
LEU
173
B
VAL
164
B
VAL
183
B
LEU
168
B
LEU
187
B
ARG
175
B
ARG
194
B
GLU
130
B
GLU
149
B
ARG
135
B
ARG
154
B
ALA
2
B
ALA
21
B
THR
9
B
THR
28
B
GLU
110
B
GLU
129
B
ILE
113
B
ILE
132
B
GLY
47
B
GLY
66
B
MSE
50
B
MSE
69
B
VAL
71
B
VAL
90
B
LEU
74
B
LEU
93
B
VAL
89
B
VAL
108
B
VAL
92
B
VAL
111
B
TYR
14
B
TYR
33
B
ALA
16
B
ALA
35
B
VAL
144
B
VAL
163
B
PRO
145
B
PRO
164
BINDING SITE FOR RESIDUE SO4 A 181
A
SO4
181
Software
9
BINDING SITE FOR RESIDUE GOL A 182
A
GOL
182
Software
5
BINDING SITE FOR RESIDUE GOL A 183
A
GOL
183
Software
6
BINDING SITE FOR RESIDUE SO4 B 181
B
SO4
181
Software
5
BINDING SITE FOR RESIDUE SO4 B 182
B
SO4
182
Software
9
BINDING SITE FOR RESIDUE SO4 B 183
B
SO4
183
Software
9
BINDING SITE FOR RESIDUE GOL B 184
B
GOL
184
Software
7
BINDING SITE FOR RESIDUE GOL B 185
B
GOL
185
Software
6
A
GLY
51
A
GLY
70
9
1_555
A
ARG
52
A
ARG
71
9
1_555
A
ASN
53
A
ASN
72
9
1_555
A
THR
54
A
THR
73
9
1_555
A
GLY
115
A
GLY
134
9
1_555
A
GLY
116
A
GLY
135
9
1_555
A
VAL
117
A
VAL
136
9
1_555
A
THR
118
A
THR
137
9
1_555
A
HOH
287
O
HOH
9
1_555
A
SER
153
A
SER
172
5
1_555
A
LEU
154
A
LEU
173
5
1_555
A
SER
155
A
SER
174
5
1_555
A
ARG
175
A
ARG
194
5
1_555
A
HOH
254
O
HOH
5
1_555
A
MSE
42
A
MSE
61
6
1_555
A
PRO
66
A
PRO
85
6
1_555
A
TYR
67
A
TYR
86
6
1_555
A
SER
68
A
SER
87
6
1_555
A
HOH
250
O
HOH
6
1_555
A
HOH
281
O
HOH
6
1_555
A
SER
152
A
SER
171
5
1_555
A
SER
153
A
SER
172
5
1_555
B
LYS
18
B
LYS
37
5
1_555
B
ARG
19
B
ARG
38
5
1_555
B
HOH
234
P
HOH
5
1_555
B
GLY
51
B
GLY
70
9
1_555
B
ARG
52
B
ARG
71
9
1_555
B
ASN
53
B
ASN
72
9
1_555
B
THR
54
B
THR
73
9
1_555
B
GLY
115
B
GLY
134
9
1_555
B
GLY
116
B
GLY
135
9
1_555
B
VAL
117
B
VAL
136
9
1_555
B
THR
118
B
THR
137
9
1_555
B
HOH
198
P
HOH
9
1_555
A
PRO
70
A
PRO
89
9
5_545
A
PHE
108
A
PHE
127
9
5_545
A
HOH
207
O
HOH
9
5_545
A
HOH
223
O
HOH
9
5_545
B
ARG
52
B
ARG
71
9
1_555
B
SER
75
B
SER
94
9
1_555
B
ASN
76
B
ASN
95
9
1_555
B
THR
77
B
THR
96
9
1_555
B
HOH
188
P
HOH
9
1_555
B
SER
153
B
SER
172
7
1_555
B
SER
155
B
SER
174
7
1_555
B
ARG
175
B
ARG
194
7
1_555
B
LYS
176
B
LYS
195
7
1_555
B
ARG
177
B
ARG
196
7
1_555
B
HOH
256
P
HOH
7
1_555
B
HOH
274
P
HOH
7
1_555
B
ASP
126
B
ASP
145
6
1_555
B
ILE
128
B
ILE
147
6
1_555
B
ASP
129
B
ASP
148
6
1_555
B
ARG
175
B
ARG
194
6
1_555
B
LYS
176
B
LYS
195
6
1_555
B
ARG
177
B
ARG
196
6
1_555
96
P 43 21 2