0.008873
0.000000
0.000342
0.000000
0.024211
0.000000
0.000000
0.000000
0.016248
0.00000
0.00000
0.00000
Ryu, K.S.
Ko, J.
Kim, H.
Choi, B.S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
92.21
90.00
112.700
41.304
61.590
C10 H14 N5 O8 P
363.221
GUANOSINE-5'-MONOPHOSPHATE
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
P
N
2
N
O
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
R
C
N
12
N
O
N
13
R
C
Y
14
N
N
Y
15
N
C
Y
16
N
N
Y
17
N
C
N
18
N
C
N
19
N
O
N
20
N
N
N
21
N
C
N
22
N
N
N
23
N
N
Y
24
N
C
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
N
N
40
S
C
N
41
N
C
N
42
N
O
N
43
N
C
N
44
N
O
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
N
N
53
S
C
N
54
N
C
N
55
N
O
N
56
N
C
N
57
N
C
N
58
N
C
N
59
N
N
N
60
N
C
N
61
N
N
N
62
N
N
N
63
N
O
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
N
N
80
S
C
N
81
N
C
N
82
N
O
N
83
N
C
N
84
N
C
N
85
N
O
N
86
N
N
N
87
N
O
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
N
N
97
S
C
N
98
N
C
N
99
N
O
N
100
N
C
N
101
N
C
N
102
N
O
N
103
N
O
N
104
N
O
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
N
N
113
R
C
N
114
N
C
N
115
N
O
N
116
N
C
N
117
N
S
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
N
N
127
S
C
N
128
N
C
N
129
N
O
N
130
N
C
N
131
N
C
N
132
N
C
N
133
N
O
N
134
N
N
N
135
N
O
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
N
N
147
S
C
N
148
N
C
N
149
N
O
N
150
N
C
N
151
N
C
N
152
N
C
N
153
N
O
N
154
N
O
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
N
N
166
N
C
N
167
N
C
N
168
N
O
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
N
N
176
S
C
N
177
N
C
N
178
N
O
N
179
N
C
Y
180
N
C
Y
181
N
N
Y
182
N
C
Y
183
N
C
Y
184
N
N
N
185
N
O
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
O
N
197
N
H
N
198
N
H
N
199
N
N
N
200
S
C
N
201
N
C
N
202
N
O
N
203
S
C
N
204
N
C
N
205
N
C
N
206
N
C
N
207
N
O
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
N
N
222
S
C
N
223
N
C
N
224
N
O
N
225
N
C
N
226
N
C
N
227
N
C
N
228
N
C
N
229
N
O
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
N
N
244
S
C
N
245
N
C
N
246
N
O
N
247
N
C
N
248
N
C
N
249
N
C
N
250
N
C
N
251
N
N
N
252
N
O
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
N
N
269
S
C
N
270
N
C
N
271
N
O
N
272
N
C
N
273
N
C
N
274
N
S
N
275
N
C
N
276
N
O
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
N
N
289
S
C
N
290
N
C
N
291
N
O
N
292
N
C
Y
293
N
C
Y
294
N
C
Y
295
N
C
Y
296
N
C
Y
297
N
C
Y
298
N
C
N
299
N
O
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
N
N
312
S
C
N
313
N
C
N
314
N
O
N
315
N
C
N
316
N
C
N
317
N
C
N
318
N
O
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
N
N
329
S
C
N
330
N
C
N
331
N
O
N
332
N
C
N
333
N
O
N
334
N
O
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
N
N
343
S
C
N
344
N
C
N
345
N
O
N
346
R
C
N
347
N
O
N
348
N
C
N
349
N
O
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
N
N
360
S
C
N
361
N
C
N
362
N
O
N
363
N
C
Y
364
N
C
Y
365
N
C
Y
366
N
C
Y
367
N
N
Y
368
N
C
Y
369
N
C
Y
370
N
C
Y
371
N
C
Y
372
N
C
N
373
N
O
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
N
N
387
S
C
N
388
N
C
N
389
N
O
N
390
N
C
Y
391
N
C
Y
392
N
C
Y
393
N
C
Y
394
N
C
Y
395
N
C
Y
396
N
C
N
397
N
O
N
398
N
O
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
N
N
411
S
C
N
412
N
C
N
413
N
O
N
414
N
C
N
415
N
C
N
416
N
C
N
417
N
O
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
Y
25
N
sing
Y
26
N
sing
Y
27
N
doub
N
28
N
sing
Y
29
N
sing
N
30
N
sing
Y
31
N
doub
N
32
N
doub
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
doub
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
doub
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
doub
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
doub
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
doub
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
doub
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
doub
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
doub
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
Y
180
N
sing
Y
181
N
doub
Y
182
N
doub
N
183
N
sing
Y
184
N
sing
N
185
N
sing
Y
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
doub
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
doub
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
doub
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
Y
288
N
doub
Y
289
N
sing
Y
290
N
sing
N
291
N
sing
Y
292
N
doub
N
293
N
sing
Y
294
N
doub
N
295
N
sing
Y
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
doub
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
doub
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
doub
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
doub
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
Y
357
N
doub
Y
358
N
sing
Y
359
N
sing
N
360
N
sing
Y
361
N
doub
Y
362
N
sing
Y
363
N
sing
N
364
N
sing
Y
365
N
sing
Y
366
N
doub
N
367
N
sing
Y
368
N
doub
N
369
N
sing
Y
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
doub
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
Y
385
N
doub
Y
386
N
sing
Y
387
N
sing
N
388
N
sing
Y
389
N
doub
N
390
N
sing
Y
391
N
doub
N
392
N
sing
Y
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
doub
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
398
97
110
10.1016/j.jmb.2010.03.007
20226196
Structure of PP4397 Reveals the Molecular Basis for Different c-di-GMP Binding Modes by Pilz Domain Proteins.
2010
10.2210/pdb3kyf/pdb
pdb_00003kyf
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
200
1
CCD
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
4A
PAL/PLS
1.5418
SYNCHROTRON
PAL/PLS BEAMLINE 4A
26529.023
Putative uncharacterized protein
UNP residues 8-238
1
man
polymer
363.221
GUANOSINE-5'-MONOPHOSPHATE
4
syn
non-polymer
18.015
water
171
nat
water
PP4397
no
no
PQPPKVLSTPLEIAANLRQLQESHDPLIITFHDRSHRFQSYVVHVDRESNTLALDEMIPRDGEKFIENGEHFRVEGFHDG
VRIAWECDHALKISEVDGHRCYSGPLPQEVTYHQRRNAFRAALKLSQLVDIILDGAHLKGNGAMRGKLLDISATGCKLRF
EGNVEDRLQLGQVYERFKAGNPLGLVDTMVELRHLHYEERINTTFAGVRFHNLSGQAQRKIESFVYQLQRE
PQPPKVLSTPLEIAANLRQLQESHDPLIITFHDRSHRFQSYVVHVDRESNTLALDEMIPRDGEKFIENGEHFRVEGFHDG
VRIAWECDHALKISEVDGHRCYSGPLPQEVTYHQRRNAFRAALKLSQLVDIILDGAHLKGNGAMRGKLLDISATGCKLRF
EGNVEDRLQLGQVYERFKAGNPLGLVDTMVELRHLHYEERINTTFAGVRFHNLSGQAQRKIESFVYQLQRE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
KT2440
sample
PP4397
160488
Pseudomonas putida
562
Escherichia coli
BL21 (DE3)
Plasmid
pET15B
1
2.70
54.44
VAPOR DIFFUSION, HANGING DROP
8.5
0.1M Tris-HCl, pH 8.5, 25% PEG 3350, 0.2M ammonium sulfate, VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
chem_comp_atom
chem_comp_bond
database_2
struct_conn
struct_site
repository
Initial release
Version format compliance
Data collection
Database references
Derived calculations
1
0
2010-04-14
1
1
2011-07-13
1
2
2024-03-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
PDBJ
2009-12-06
REL
REL
5GP
GUANOSINE-5'-MONOPHOSPHATE
HOH
water
5GP
501
2
5GP
5GP
501
A
5GP
502
2
5GP
5GP
502
A
5GP
503
2
5GP
5GP
503
A
5GP
504
2
5GP
5GP
504
A
HOH
1
3
HOH
HOH
1
A
HOH
2
3
HOH
HOH
2
A
HOH
3
3
HOH
HOH
3
A
HOH
4
3
HOH
HOH
4
A
HOH
5
3
HOH
HOH
5
A
HOH
6
3
HOH
HOH
6
A
HOH
7
3
HOH
HOH
7
A
HOH
8
3
HOH
HOH
239
A
HOH
9
3
HOH
HOH
240
A
HOH
10
3
HOH
HOH
241
A
HOH
11
3
HOH
HOH
242
A
HOH
12
3
HOH
HOH
243
A
HOH
13
3
HOH
HOH
244
A
HOH
14
3
HOH
HOH
245
A
HOH
15
3
HOH
HOH
246
A
HOH
16
3
HOH
HOH
247
A
HOH
17
3
HOH
HOH
248
A
HOH
18
3
HOH
HOH
249
A
HOH
19
3
HOH
HOH
250
A
HOH
20
3
HOH
HOH
251
A
HOH
21
3
HOH
HOH
252
A
HOH
22
3
HOH
HOH
253
A
HOH
23
3
HOH
HOH
254
A
HOH
24
3
HOH
HOH
255
A
HOH
25
3
HOH
HOH
256
A
HOH
26
3
HOH
HOH
257
A
HOH
27
3
HOH
HOH
258
A
HOH
28
3
HOH
HOH
259
A
HOH
29
3
HOH
HOH
260
A
HOH
30
3
HOH
HOH
261
A
HOH
31
3
HOH
HOH
262
A
HOH
32
3
HOH
HOH
263
A
HOH
33
3
HOH
HOH
264
A
HOH
34
3
HOH
HOH
265
A
HOH
35
3
HOH
HOH
266
A
HOH
36
3
HOH
HOH
267
A
HOH
37
3
HOH
HOH
268
A
HOH
38
3
HOH
HOH
269
A
HOH
39
3
HOH
HOH
270
A
HOH
40
3
HOH
HOH
271
A
HOH
41
3
HOH
HOH
272
A
HOH
42
3
HOH
HOH
273
A
HOH
43
3
HOH
HOH
274
A
HOH
44
3
HOH
HOH
275
A
HOH
45
3
HOH
HOH
276
A
HOH
46
3
HOH
HOH
277
A
HOH
47
3
HOH
HOH
278
A
HOH
48
3
HOH
HOH
279
A
HOH
49
3
HOH
HOH
280
A
HOH
50
3
HOH
HOH
281
A
HOH
51
3
HOH
HOH
282
A
HOH
52
3
HOH
HOH
283
A
HOH
53
3
HOH
HOH
284
A
HOH
54
3
HOH
HOH
285
A
HOH
55
3
HOH
HOH
286
A
HOH
56
3
HOH
HOH
287
A
HOH
57
3
HOH
HOH
288
A
HOH
58
3
HOH
HOH
289
A
HOH
59
3
HOH
HOH
290
A
HOH
60
3
HOH
HOH
291
A
HOH
61
3
HOH
HOH
292
A
HOH
62
3
HOH
HOH
293
A
HOH
63
3
HOH
HOH
294
A
HOH
64
3
HOH
HOH
295
A
HOH
65
3
HOH
HOH
296
A
HOH
66
3
HOH
HOH
297
A
HOH
67
3
HOH
HOH
298
A
HOH
68
3
HOH
HOH
299
A
HOH
69
3
HOH
HOH
300
A
HOH
70
3
HOH
HOH
301
A
HOH
71
3
HOH
HOH
302
A
HOH
72
3
HOH
HOH
303
A
HOH
73
3
HOH
HOH
304
A
HOH
74
3
HOH
HOH
305
A
HOH
75
3
HOH
HOH
306
A
HOH
76
3
HOH
HOH
307
A
HOH
77
3
HOH
HOH
308
A
HOH
78
3
HOH
HOH
309
A
HOH
79
3
HOH
HOH
310
A
HOH
80
3
HOH
HOH
311
A
HOH
81
3
HOH
HOH
312
A
HOH
82
3
HOH
HOH
313
A
HOH
83
3
HOH
HOH
314
A
HOH
84
3
HOH
HOH
315
A
HOH
85
3
HOH
HOH
316
A
HOH
86
3
HOH
HOH
317
A
HOH
87
3
HOH
HOH
318
A
HOH
88
3
HOH
HOH
319
A
HOH
89
3
HOH
HOH
320
A
HOH
90
3
HOH
HOH
321
A
HOH
91
3
HOH
HOH
322
A
HOH
92
3
HOH
HOH
323
A
HOH
93
3
HOH
HOH
324
A
HOH
94
3
HOH
HOH
325
A
HOH
95
3
HOH
HOH
326
A
HOH
96
3
HOH
HOH
327
A
HOH
97
3
HOH
HOH
328
A
HOH
98
3
HOH
HOH
329
A
HOH
99
3
HOH
HOH
330
A
HOH
100
3
HOH
HOH
331
A
HOH
101
3
HOH
HOH
332
A
HOH
102
3
HOH
HOH
333
A
HOH
103
3
HOH
HOH
334
A
HOH
104
3
HOH
HOH
335
A
HOH
105
3
HOH
HOH
336
A
HOH
106
3
HOH
HOH
337
A
HOH
107
3
HOH
HOH
338
A
HOH
108
3
HOH
HOH
339
A
HOH
109
3
HOH
HOH
340
A
HOH
110
3
HOH
HOH
341
A
HOH
111
3
HOH
HOH
342
A
HOH
112
3
HOH
HOH
343
A
HOH
113
3
HOH
HOH
344
A
HOH
114
3
HOH
HOH
345
A
HOH
115
3
HOH
HOH
346
A
HOH
116
3
HOH
HOH
347
A
HOH
117
3
HOH
HOH
348
A
HOH
118
3
HOH
HOH
349
A
HOH
119
3
HOH
HOH
350
A
HOH
120
3
HOH
HOH
351
A
HOH
121
3
HOH
HOH
352
A
HOH
122
3
HOH
HOH
353
A
HOH
123
3
HOH
HOH
354
A
HOH
124
3
HOH
HOH
355
A
HOH
125
3
HOH
HOH
356
A
HOH
126
3
HOH
HOH
357
A
HOH
127
3
HOH
HOH
358
A
HOH
128
3
HOH
HOH
359
A
HOH
129
3
HOH
HOH
360
A
HOH
130
3
HOH
HOH
361
A
HOH
131
3
HOH
HOH
362
A
HOH
132
3
HOH
HOH
363
A
HOH
133
3
HOH
HOH
364
A
HOH
134
3
HOH
HOH
365
A
HOH
135
3
HOH
HOH
366
A
HOH
136
3
HOH
HOH
367
A
HOH
137
3
HOH
HOH
368
A
HOH
138
3
HOH
HOH
369
A
HOH
139
3
HOH
HOH
370
A
HOH
140
3
HOH
HOH
371
A
HOH
141
3
HOH
HOH
372
A
HOH
142
3
HOH
HOH
373
A
HOH
143
3
HOH
HOH
374
A
HOH
144
3
HOH
HOH
375
A
HOH
145
3
HOH
HOH
376
A
HOH
146
3
HOH
HOH
377
A
HOH
147
3
HOH
HOH
378
A
HOH
148
3
HOH
HOH
379
A
HOH
149
3
HOH
HOH
380
A
HOH
150
3
HOH
HOH
381
A
HOH
151
3
HOH
HOH
382
A
HOH
152
3
HOH
HOH
383
A
HOH
153
3
HOH
HOH
384
A
HOH
154
3
HOH
HOH
385
A
HOH
155
3
HOH
HOH
386
A
HOH
156
3
HOH
HOH
387
A
HOH
157
3
HOH
HOH
388
A
HOH
158
3
HOH
HOH
389
A
HOH
159
3
HOH
HOH
390
A
HOH
160
3
HOH
HOH
391
A
HOH
161
3
HOH
HOH
392
A
HOH
162
3
HOH
HOH
393
A
HOH
163
3
HOH
HOH
394
A
HOH
164
3
HOH
HOH
395
A
HOH
165
3
HOH
HOH
396
A
HOH
166
3
HOH
HOH
397
A
HOH
167
3
HOH
HOH
398
A
HOH
168
3
HOH
HOH
399
A
HOH
169
3
HOH
HOH
400
A
HOH
170
3
HOH
HOH
401
A
HOH
171
3
HOH
HOH
402
A
PRO
8
n
1
PRO
8
A
GLN
9
n
2
GLN
9
A
PRO
10
n
3
PRO
10
A
PRO
11
n
4
PRO
11
A
LYS
12
n
5
LYS
12
A
VAL
13
n
6
VAL
13
A
LEU
14
n
7
LEU
14
A
SER
15
n
8
SER
15
A
THR
16
n
9
THR
16
A
PRO
17
n
10
PRO
17
A
LEU
18
n
11
LEU
18
A
GLU
19
n
12
GLU
19
A
ILE
20
n
13
ILE
20
A
ALA
21
n
14
ALA
21
A
ALA
22
n
15
ALA
22
A
ASN
23
n
16
ASN
23
A
LEU
24
n
17
LEU
24
A
ARG
25
n
18
ARG
25
A
GLN
26
n
19
GLN
26
A
LEU
27
n
20
LEU
27
A
GLN
28
n
21
GLN
28
A
GLU
29
n
22
GLU
29
A
SER
30
n
23
SER
30
A
HIS
31
n
24
HIS
31
A
ASP
32
n
25
ASP
32
A
PRO
33
n
26
PRO
33
A
LEU
34
n
27
LEU
34
A
ILE
35
n
28
ILE
35
A
ILE
36
n
29
ILE
36
A
THR
37
n
30
THR
37
A
PHE
38
n
31
PHE
38
A
HIS
39
n
32
HIS
39
A
ASP
40
n
33
ASP
40
A
ARG
41
n
34
ARG
41
A
SER
42
n
35
SER
42
A
HIS
43
n
36
HIS
43
A
ARG
44
n
37
ARG
44
A
PHE
45
n
38
PHE
45
A
GLN
46
n
39
GLN
46
A
SER
47
n
40
SER
47
A
TYR
48
n
41
TYR
48
A
VAL
49
n
42
VAL
49
A
VAL
50
n
43
VAL
50
A
HIS
51
n
44
HIS
51
A
VAL
52
n
45
VAL
52
A
ASP
53
n
46
ASP
53
A
ARG
54
n
47
ARG
54
A
GLU
55
n
48
GLU
55
A
SER
56
n
49
SER
56
A
ASN
57
n
50
ASN
57
A
THR
58
n
51
THR
58
A
LEU
59
n
52
LEU
59
A
ALA
60
n
53
ALA
60
A
LEU
61
n
54
LEU
61
A
ASP
62
n
55
ASP
62
A
GLU
63
n
56
GLU
63
A
MET
64
n
57
MET
64
A
ILE
65
n
58
ILE
65
A
PRO
66
n
59
PRO
66
A
ARG
67
n
60
ARG
67
A
ASP
68
n
61
ASP
68
A
GLY
69
n
62
GLY
69
A
GLU
70
n
63
GLU
70
A
LYS
71
n
64
LYS
71
A
PHE
72
n
65
PHE
72
A
ILE
73
n
66
ILE
73
A
GLU
74
n
67
GLU
74
A
ASN
75
n
68
ASN
75
A
GLY
76
n
69
GLY
76
A
GLU
77
n
70
GLU
77
A
HIS
78
n
71
HIS
78
A
PHE
79
n
72
PHE
79
A
ARG
80
n
73
ARG
80
A
VAL
81
n
74
VAL
81
A
GLU
82
n
75
GLU
82
A
GLY
83
n
76
GLY
83
A
PHE
84
n
77
PHE
84
A
HIS
85
n
78
HIS
85
A
ASP
86
n
79
ASP
86
A
GLY
87
n
80
GLY
87
A
VAL
88
n
81
VAL
88
A
ARG
89
n
82
ARG
89
A
ILE
90
n
83
ILE
90
A
ALA
91
n
84
ALA
91
A
TRP
92
n
85
TRP
92
A
GLU
93
n
86
GLU
93
A
CYS
94
n
87
CYS
94
A
ASP
95
n
88
ASP
95
A
HIS
96
n
89
HIS
96
A
ALA
97
n
90
ALA
97
A
LEU
98
n
91
LEU
98
A
LYS
99
n
92
LYS
99
A
ILE
100
n
93
ILE
100
A
SER
101
n
94
SER
101
A
GLU
102
n
95
GLU
102
A
VAL
103
n
96
VAL
103
A
ASP
104
n
97
ASP
104
A
GLY
105
n
98
GLY
105
A
HIS
106
n
99
HIS
106
A
ARG
107
n
100
ARG
107
A
CYS
108
n
101
CYS
108
A
TYR
109
n
102
TYR
109
A
SER
110
n
103
SER
110
A
GLY
111
n
104
GLY
111
A
PRO
112
n
105
PRO
112
A
LEU
113
n
106
LEU
113
A
PRO
114
n
107
PRO
114
A
GLN
115
n
108
GLN
115
A
GLU
116
n
109
GLU
116
A
VAL
117
n
110
VAL
117
A
THR
118
n
111
THR
118
A
TYR
119
n
112
TYR
119
A
HIS
120
n
113
HIS
120
A
GLN
121
n
114
GLN
121
A
ARG
122
n
115
ARG
122
A
ARG
123
n
116
ARG
123
A
ASN
124
n
117
ASN
124
A
ALA
125
n
118
ALA
125
A
PHE
126
n
119
PHE
126
A
ARG
127
n
120
ARG
127
A
ALA
128
n
121
ALA
128
A
ALA
129
n
122
ALA
129
A
LEU
130
n
123
LEU
130
A
LYS
131
n
124
LYS
131
A
LEU
132
n
125
LEU
132
A
SER
133
n
126
SER
133
A
GLN
134
n
127
GLN
134
A
LEU
135
n
128
LEU
135
A
VAL
136
n
129
VAL
136
A
ASP
137
n
130
ASP
137
A
ILE
138
n
131
ILE
138
A
ILE
139
n
132
ILE
139
A
LEU
140
n
133
LEU
140
A
ASP
141
n
134
ASP
141
A
GLY
142
n
135
GLY
142
A
ALA
143
n
136
ALA
143
A
HIS
144
n
137
HIS
144
A
LEU
145
n
138
LEU
145
A
LYS
146
n
139
LYS
146
A
GLY
147
n
140
GLY
147
A
ASN
148
n
141
ASN
148
A
GLY
149
n
142
GLY
149
A
ALA
150
n
143
ALA
150
A
MET
151
n
144
MET
151
A
ARG
152
n
145
ARG
152
A
GLY
153
n
146
GLY
153
A
LYS
154
n
147
LYS
154
A
LEU
155
n
148
LEU
155
A
LEU
156
n
149
LEU
156
A
ASP
157
n
150
ASP
157
A
ILE
158
n
151
ILE
158
A
SER
159
n
152
SER
159
A
ALA
160
n
153
ALA
160
A
THR
161
n
154
THR
161
A
GLY
162
n
155
GLY
162
A
CYS
163
n
156
CYS
163
A
LYS
164
n
157
LYS
164
A
LEU
165
n
158
LEU
165
A
ARG
166
n
159
ARG
166
A
PHE
167
n
160
PHE
167
A
GLU
168
n
161
GLU
168
A
GLY
169
n
162
GLY
169
A
ASN
170
n
163
ASN
170
A
VAL
171
n
164
VAL
171
A
GLU
172
n
165
GLU
172
A
ASP
173
n
166
ASP
173
A
ARG
174
n
167
ARG
174
A
LEU
175
n
168
LEU
175
A
GLN
176
n
169
GLN
176
A
LEU
177
n
170
LEU
177
A
GLY
178
n
171
GLY
178
A
GLN
179
n
172
GLN
179
A
VAL
180
n
173
VAL
180
A
TYR
181
n
174
TYR
181
A
GLU
182
n
175
GLU
182
A
ARG
183
n
176
ARG
183
A
PHE
184
n
177
PHE
184
A
LYS
185
n
178
LYS
185
A
ALA
186
n
179
ALA
186
A
GLY
187
n
180
GLY
187
A
ASN
188
n
181
ASN
188
A
PRO
189
n
182
PRO
189
A
LEU
190
n
183
LEU
190
A
GLY
191
n
184
GLY
191
A
LEU
192
n
185
LEU
192
A
VAL
193
n
186
VAL
193
A
ASP
194
n
187
ASP
194
A
THR
195
n
188
THR
195
A
MET
196
n
189
MET
196
A
VAL
197
n
190
VAL
197
A
GLU
198
n
191
GLU
198
A
LEU
199
n
192
LEU
199
A
ARG
200
n
193
ARG
200
A
HIS
201
n
194
HIS
201
A
LEU
202
n
195
LEU
202
A
HIS
203
n
196
HIS
203
A
TYR
204
n
197
TYR
204
A
GLU
205
n
198
GLU
205
A
GLU
206
n
199
GLU
206
A
ARG
207
n
200
ARG
207
A
ILE
208
n
201
ILE
208
A
ASN
209
n
202
ASN
209
A
THR
210
n
203
THR
210
A
THR
211
n
204
THR
211
A
PHE
212
n
205
PHE
212
A
ALA
213
n
206
ALA
213
A
GLY
214
n
207
GLY
214
A
VAL
215
n
208
VAL
215
A
ARG
216
n
209
ARG
216
A
PHE
217
n
210
PHE
217
A
HIS
218
n
211
HIS
218
A
ASN
219
n
212
ASN
219
A
LEU
220
n
213
LEU
220
A
SER
221
n
214
SER
221
A
GLY
222
n
215
GLY
222
A
GLN
223
n
216
GLN
223
A
ALA
224
n
217
ALA
224
A
GLN
225
n
218
GLN
225
A
ARG
226
n
219
ARG
226
A
LYS
227
n
220
LYS
227
A
ILE
228
n
221
ILE
228
A
GLU
229
n
222
GLU
229
A
SER
230
n
223
SER
230
A
PHE
231
n
224
PHE
231
A
VAL
232
n
225
VAL
232
A
TYR
233
n
226
TYR
233
A
GLN
234
n
227
GLN
234
A
LEU
235
n
228
LEU
235
A
GLN
236
n
229
GLN
236
A
ARG
237
n
230
ARG
237
A
GLU
238
n
231
GLU
238
A
author_defined_assembly
1
monomeric
software_defined_assembly
PISA
2
dimeric
2820
-1
24460
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
2_555
-x,y,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
N
LYS
12
A
N
LYS
5
A
O
TYR
119
A
O
TYR
112
A
O
THR
118
A
O
THR
111
A
N
ALA
91
A
N
ALA
84
A
O
ILE
90
A
O
ILE
83
A
N
GLY
83
A
N
GLY
76
A
O
GLU
82
A
O
GLU
75
A
N
ILE
35
A
N
ILE
28
A
N
ILE
36
A
N
ILE
29
A
O
PHE
45
A
O
PHE
38
A
N
VAL
50
A
N
VAL
43
A
O
ALA
60
A
O
ALA
53
A
N
LEU
61
A
N
LEU
54
A
O
TYR
109
A
O
TYR
102
A
O
HIS
106
A
O
HIS
99
A
N
VAL
103
A
N
VAL
96
A
N
ALA
128
A
N
ALA
121
A
O
ILE
158
A
O
ILE
151
A
N
LEU
156
A
N
LEU
149
A
O
LYS
164
A
O
LYS
157
A
N
LEU
165
A
N
LEU
158
A
O
ALA
213
A
O
ALA
206
A
O
GLY
214
A
O
GLY
207
A
N
ARG
200
A
N
ARG
193
A
O
VAL
197
A
O
VAL
190
A
N
TYR
181
A
N
TYR
174
A
O
LYS
185
A
O
LYS
178
A
N
ILE
139
A
N
ILE
132
A
N
LEU
140
A
N
LEU
133
A
O
MET
151
A
O
MET
144
1
A
GLN
9
64.90
109.72
protein_rep.param
protein.top
ks_5gp.param
ks_5gp.top
water_rep.param
water.top
ion.param
ion.top
dna-rna.param
dna-rna.top
34.3
-4.75
0.00
7.15
2.98
0.00
1.77
BULK SOLVENT MODEL USED
0.244
0.006
0.194
0.194
2.10
33.01
1573
15505
10.1
92.2
RANDOM
200903.88
0.000000
1
RESTRAINED
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
FLAT MODEL
70.5705
0.4
0.32
0.24
5.00
0.35
0.28
2.10
33.01
171
2132
92
0
1869
0.007
1.3
24.8
0.82
2.16
1.50
3.16
2.00
3.50
2.00
5.08
2.50
0.297
0.019
0.256
2.23
233
1771
6
11.6
72.6
12.4
2.10
50.0
3KYF
15600
1
data collection
HKL-2000
phasing
PHASES
refinement
CNS
1.2
data reduction
HKL-2000
data scaling
HKL-2000
Y
Crystal structure of P4397 complexed with c-di-GMP
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
3
N
N
A
THR
16
A
THR
9
HELX_P
A
SER
30
A
SER
23
1
1
15
A
PRO
66
A
PRO
59
HELX_P
A
ASP
68
A
ASP
61
5
2
3
A
GLY
69
A
GLY
62
HELX_P
A
ASN
75
A
ASN
68
1
3
7
A
LYS
131
A
LYS
124
HELX_P
A
LEU
135
A
LEU
128
5
4
5
A
VAL
171
A
VAL
164
HELX_P
A
LEU
175
A
LEU
168
5
5
5
A
GLU
206
A
GLU
199
HELX_P
A
ILE
208
A
ILE
201
5
6
3
A
SER
221
A
SER
214
HELX_P
A
GLU
238
A
GLU
231
1
7
18
covale
1.600
one
A
5GP
501
B
P
5GP
1_555
A
5GP
502
C
O3'
5GP
1_555
covale
1.601
one
A
5GP
501
B
O3'
5GP
1_555
A
5GP
502
C
P
5GP
1_555
covale
1.598
one
A
5GP
503
D
P
5GP
1_555
A
5GP
504
E
O3'
5GP
1_555
covale
1.600
one
A
5GP
503
D
O3'
5GP
1_555
A
5GP
504
E
P
5GP
1_555
UNKNOWN FUNCTION
c-di-GMP, PilZ domain, PP4397, VCA0042, UNKNOWN FUNCTION
A
ILE
65
A
ILE
58
1
A
PRO
66
A
PRO
59
0.10
A
ASN
188
A
ASN
181
1
A
PRO
189
A
PRO
182
0.14
Q88EQ6_PSEPK
UNP
1
8
Q88EQ6
PQPPKVLSTPLEIAANLRQLQESHDPLIITFHDRSHRFQSYVVHVDRESNTLALDEMIPRDGEKFIENGEHFRVEGFHDG
VRIAWECDHALKISEVDGHRCYSGPLPQEVTYHQRRNAFRAALKLSQLVDIILDGAHLKGNGAMRGKLLDISATGCKLRF
EGNVEDRLQLGQVYERFKAGNPLGLVDTMVELRHLHYEERINTTFAGVRFHNLSGQAQRKIESFVYQLQRE
8
238
3KYF
8
238
Q88EQ6
A
1
1
231
6
4
8
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LYS
12
A
LYS
5
A
LEU
14
A
LEU
7
A
VAL
117
A
VAL
110
A
HIS
120
A
HIS
113
A
VAL
88
A
VAL
81
A
CYS
94
A
CYS
87
A
PHE
79
A
PHE
72
A
HIS
85
A
HIS
78
A
LEU
34
A
LEU
27
A
PHE
38
A
PHE
31
A
ARG
44
A
ARG
37
A
SER
47
A
SER
40
A
VAL
49
A
VAL
42
A
ASP
53
A
ASP
46
A
THR
58
A
THR
51
A
ASP
62
A
ASP
55
A
HIS
106
A
HIS
99
A
GLY
111
A
GLY
104
A
LYS
99
A
LYS
92
A
VAL
103
A
VAL
96
A
ALA
128
A
ALA
121
A
ALA
129
A
ALA
122
A
MET
151
A
MET
144
A
ILE
158
A
ILE
151
A
GLY
162
A
GLY
155
A
GLU
168
A
GLU
161
A
THR
210
A
THR
203
A
HIS
218
A
HIS
211
A
LEU
192
A
LEU
185
A
GLU
205
A
GLU
198
A
VAL
180
A
VAL
173
A
ALA
186
A
ALA
179
A
ASP
137
A
ASP
130
A
LEU
140
A
LEU
133
A
MET
151
A
MET
144
A
ILE
158
A
ILE
151
BINDING SITE FOR RESIDUE 5GP A 501
A
5GP
501
Software
10
BINDING SITE FOR RESIDUE 5GP A 502
A
5GP
502
Software
10
BINDING SITE FOR RESIDUE 5GP A 503
A
5GP
503
Software
16
BINDING SITE FOR RESIDUE 5GP A 504
A
5GP
504
Software
10
A
ARG
123
A
ARG
116
10
1_555
A
ARG
127
A
ARG
120
10
1_555
A
HIS
201
A
HIS
194
10
1_555
A
HOH
271
F
HOH
10
1_555
A
HOH
274
F
HOH
10
1_555
A
HOH
288
F
HOH
10
1_555
A
HOH
325
F
HOH
10
1_555
A
5GP
502
C
5GP
10
1_555
A
5GP
503
D
5GP
10
1_555
A
5GP
504
E
5GP
10
1_555
A
PHE
84
A
PHE
77
10
1_555
A
GLY
87
A
GLY
80
10
1_555
A
GLN
121
A
GLN
114
10
1_555
A
ARG
122
A
ARG
115
10
1_555
A
ARG
123
A
ARG
116
10
1_555
A
HOH
300
F
HOH
10
1_555
A
HOH
319
F
HOH
10
1_555
A
HOH
322
F
HOH
10
2_555
A
5GP
501
B
5GP
10
1_555
A
5GP
504
E
5GP
10
1_555
A
ARG
127
A
ARG
120
16
1_555
A
ASP
157
A
ASP
150
16
1_555
A
SER
159
A
SER
152
16
1_555
A
THR
161
A
THR
154
16
1_555
A
GLY
162
A
GLY
155
16
1_555
A
CYS
163
A
CYS
156
16
1_555
A
LYS
164
A
LYS
157
16
1_555
A
ARG
200
A
ARG
193
16
1_555
A
HIS
201
A
HIS
194
16
1_555
A
GLY
214
A
GLY
207
16
1_555
A
VAL
215
A
VAL
208
16
1_555
A
ARG
216
A
ARG
209
16
1_555
A
HOH
271
F
HOH
16
1_555
A
HOH
394
F
HOH
16
1_555
A
5GP
501
B
5GP
16
1_555
A
5GP
504
E
5GP
16
1_555
A
ARG
122
A
ARG
115
10
1_555
A
ARG
123
A
ARG
116
10
1_555
A
ASN
124
A
ASN
117
10
1_555
A
ARG
127
A
ARG
120
10
1_555
A
HOH
250
F
HOH
10
1_555
A
HOH
272
F
HOH
10
1_555
A
HOH
379
F
HOH
10
1_555
A
5GP
501
B
5GP
10
1_555
A
5GP
502
C
5GP
10
1_555
A
5GP
503
D
5GP
10
1_555
5
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