0.029207
0.000000
0.000000
0.000000
0.028493
0.000000
0.000000
0.000000
0.022801
0.00000
0.00000
0.00000
Gardberg, A.S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
34.238
35.096
43.858
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
D2 O
20.028
DEUTERATED WATER
non-polymer
Fe 3
55.845
FE (III) ION
non-polymer
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
O
N
21
N
N
N
22
N
O
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
N
N
32
S
C
N
33
N
C
N
34
N
O
N
35
N
C
N
36
N
C
N
37
N
O
N
38
N
O
N
39
N
O
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
N
N
48
R
C
N
49
N
C
N
50
N
O
N
51
N
C
N
52
N
S
N
53
N
O
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
O
N
62
N
D
N
63
N
D
N
64
N
FE
N
65
N
N
N
66
S
C
N
67
N
C
N
68
N
O
N
69
N
C
N
70
N
C
N
71
N
C
N
72
N
O
N
73
N
O
N
74
N
O
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
N
N
85
N
C
N
86
N
C
N
87
N
O
N
88
N
O
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
S
C
N
99
N
C
N
100
N
C
N
101
N
C
N
102
N
O
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
N
N
117
S
C
N
118
N
C
N
119
N
O
N
120
N
C
N
121
N
C
N
122
N
C
N
123
N
C
N
124
N
O
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
N
N
139
S
C
N
140
N
C
N
141
N
O
N
142
N
C
N
143
N
C
N
144
N
C
N
145
N
C
N
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
N
N
164
S
C
N
165
N
C
N
166
N
O
N
167
N
C
N
168
N
C
N
169
N
S
N
170
N
C
N
171
N
O
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
Y
188
N
C
Y
189
N
C
Y
190
N
C
Y
191
N
C
Y
192
N
C
Y
193
N
C
N
194
N
O
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
N
N
207
S
C
N
208
N
C
N
209
N
O
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
O
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
N
N
224
S
C
N
225
N
C
N
226
N
O
N
227
N
C
N
228
N
O
N
229
N
O
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
N
N
238
S
C
N
239
N
C
N
240
N
O
N
241
R
C
N
242
N
O
N
243
N
C
N
244
N
O
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
N
N
255
S
C
N
256
N
C
N
257
N
O
N
258
N
C
Y
259
N
C
Y
260
N
C
Y
261
N
C
Y
262
N
N
Y
263
N
C
Y
264
N
C
Y
265
N
C
Y
266
N
C
Y
267
N
C
N
268
N
O
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
N
N
282
S
C
N
283
N
C
N
284
N
O
N
285
N
C
Y
286
N
C
Y
287
N
C
Y
288
N
C
Y
289
N
C
Y
290
N
C
Y
291
N
C
N
292
N
O
N
293
N
O
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
N
C
N
310
N
C
N
311
N
C
N
312
N
O
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
doub
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
doub
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
doub
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
doub
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
doub
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
doub
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
doub
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
doub
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
Y
182
N
doub
Y
183
N
sing
Y
184
N
sing
N
185
N
sing
Y
186
N
doub
N
187
N
sing
Y
188
N
doub
N
189
N
sing
Y
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
doub
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
doub
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
Y
251
N
doub
Y
252
N
sing
Y
253
N
sing
N
254
N
sing
Y
255
N
doub
Y
256
N
sing
Y
257
N
sing
N
258
N
sing
Y
259
N
sing
Y
260
N
doub
N
261
N
sing
Y
262
N
doub
N
263
N
sing
Y
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
doub
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
Y
279
N
doub
Y
280
N
sing
Y
281
N
sing
N
282
N
sing
Y
283
N
doub
N
284
N
sing
Y
285
N
doub
N
286
N
sing
Y
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
doub
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
66
558
567
10.1107/S0907444910005494
20445231
Unambiguous determination of H-atom positions: comparing results from neutron and high-resolution X-ray crystallography.
2010
10.2210/pdb3kyy/pdb
pdb_00003kyy
295
1
295
1
CCD
2008-03-09
MARMOSAIC 225 mm CCD
IMAGE PLATE
MAATEL LADI-III
SINGLE WAVELENGTH
x-ray
1
LAUE
neutron
1
1.0
1.0
3.1
1.0
4.2
1.0
22-BM
APS
1.0
SYNCHROTRON
APS BEAMLINE 22-BM
3.1-4.2
NUCLEAR REACTOR
6031.728
Rubredoxin
1
man
polymer
55.845
FE (III) ION
1
syn
non-polymer
18.015
water
37
nat
water
Rd
no
no
MAKWVCKICGYIYDEDAGDPDNGISPGTKFEELPDDWVCPICGAPKSEFEKLED
MAKWVCKICGYIYDEDAGDPDNGISPGTKFEELPDDWVCPICGAPKSEFEKLED
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Ab-initio perdeuteration
sample
rub, PF1282
2261
Pyrococcus furiosus
562
Escherichia coli
BL21(DE3)
plasmid
pET24d
1
2
2.20
44.10
3.8 M sodium/potassium phosphate, hanging drop
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Database references
Data collection
Database references
Derived calculations
Refinement description
1
0
2010-04-28
1
1
2011-07-13
1
2
2011-09-14
1
3
2023-09-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2009-12-07
REL
REL
FE
FE (III) ION
DOD
water
1BRF
PDB
experimental model
FE
54
2
FE
FE
54
A
DOD
55
3
DOD
DOD
55
A
DOD
56
3
DOD
DOD
56
A
DOD
57
3
DOD
DOD
57
A
DOD
58
3
DOD
DOD
58
A
DOD
59
3
DOD
DOD
59
A
DOD
60
3
DOD
DOD
60
A
DOD
61
3
DOD
DOD
61
A
DOD
62
3
DOD
DOD
62
A
DOD
63
3
DOD
DOD
63
A
DOD
64
3
DOD
DOD
64
A
DOD
65
3
DOD
DOD
65
A
DOD
66
3
DOD
DOD
66
A
DOD
67
3
DOD
DOD
67
A
DOD
68
3
DOD
DOD
68
A
DOD
69
3
DOD
DOD
69
A
DOD
70
3
DOD
DOD
70
A
DOD
71
3
DOD
DOD
71
A
DOD
72
3
DOD
DOD
72
A
DOD
73
3
DOD
DOD
73
A
DOD
74
3
DOD
DOD
74
A
DOD
75
3
DOD
DOD
75
A
DOD
76
3
DOD
DOD
76
A
DOD
77
3
DOD
DOD
77
A
DOD
78
3
DOD
DOD
78
A
DOD
79
3
DOD
DOD
79
A
DOD
80
3
DOD
DOD
80
A
DOD
81
3
DOD
DOD
81
A
DOD
82
3
DOD
DOD
82
A
DOD
83
3
DOD
DOD
83
A
DOD
84
3
DOD
DOD
84
A
DOD
85
3
DOD
DOD
85
A
DOD
86
3
DOD
DOD
86
A
DOD
87
3
DOD
DOD
87
A
DOD
88
3
DOD
DOD
88
A
DOD
89
3
DOD
DOD
89
A
DOD
90
3
DOD
DOD
90
A
DOD
91
3
DOD
DOD
91
A
MET
0
n
1
MET
0
A
ALA
1
n
2
ALA
1
A
LYS
2
n
3
LYS
2
A
TRP
3
n
4
TRP
3
A
VAL
4
n
5
VAL
4
A
CYS
5
n
6
CYS
5
A
LYS
6
n
7
LYS
6
A
ILE
7
n
8
ILE
7
A
CYS
8
n
9
CYS
8
A
GLY
9
n
10
GLY
9
A
TYR
10
n
11
TYR
10
A
ILE
11
n
12
ILE
11
A
TYR
12
n
13
TYR
12
A
ASP
13
n
14
ASP
13
A
GLU
14
n
15
GLU
14
A
ASP
15
n
16
ASP
15
A
ALA
16
n
17
ALA
16
A
GLY
17
n
18
GLY
17
A
ASP
18
n
19
ASP
18
A
PRO
19
n
20
PRO
19
A
ASP
20
n
21
ASP
20
A
ASN
21
n
22
ASN
21
A
GLY
22
n
23
GLY
22
A
ILE
23
n
24
ILE
23
A
SER
24
n
25
SER
24
A
PRO
25
n
26
PRO
25
A
GLY
26
n
27
GLY
26
A
THR
27
n
28
THR
27
A
LYS
28
n
29
LYS
28
A
PHE
29
n
30
PHE
29
A
GLU
30
n
31
GLU
30
A
GLU
31
n
32
GLU
31
A
LEU
32
n
33
LEU
32
A
PRO
33
n
34
PRO
33
A
ASP
34
n
35
ASP
34
A
ASP
35
n
36
ASP
35
A
TRP
36
n
37
TRP
36
A
VAL
37
n
38
VAL
37
A
CYS
38
n
39
CYS
38
A
PRO
39
n
40
PRO
39
A
ILE
40
n
41
ILE
40
A
CYS
41
n
42
CYS
41
A
GLY
42
n
43
GLY
42
A
ALA
43
n
44
ALA
43
A
PRO
44
n
45
PRO
44
A
LYS
45
n
46
LYS
45
A
SER
46
n
47
SER
46
A
GLU
47
n
48
GLU
47
A
PHE
48
n
49
PHE
48
A
GLU
49
n
50
GLU
49
A
LYS
50
n
51
LYS
50
A
LEU
51
n
52
LEU
51
A
GLU
52
n
53
GLU
52
A
ASP
53
n
54
ASP
53
A
author_and_software_defined_assembly
PISA
1
monomeric
A
CYS
5
A
SG
CYS
6
1_555
A
FE
54
B
FE
FE
1_555
A
CYS
8
A
SG
CYS
9
1_555
112.6
A
CYS
5
A
SG
CYS
6
1_555
A
FE
54
B
FE
FE
1_555
A
CYS
38
A
SG
CYS
39
1_555
111.6
A
CYS
8
A
SG
CYS
9
1_555
A
FE
54
B
FE
FE
1_555
A
CYS
38
A
SG
CYS
39
1_555
103.3
A
CYS
5
A
SG
CYS
6
1_555
A
FE
54
B
FE
FE
1_555
A
CYS
41
A
SG
CYS
42
1_555
104.2
A
CYS
8
A
SG
CYS
9
1_555
A
FE
54
B
FE
FE
1_555
A
CYS
41
A
SG
CYS
42
1_555
113.5
A
CYS
38
A
SG
CYS
39
1_555
A
FE
54
B
FE
FE
1_555
A
CYS
41
A
SG
CYS
42
1_555
111.8
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
TYR
12
A
O
TYR
13
A
N
TRP
3
A
N
TRP
4
A
N
VAL
4
A
N
VAL
5
A
O
GLU
49
A
O
GLU
50
1
A
CE
LYS
6
A
CE
LYS
7
1
Y
1
A
NZ
LYS
6
A
NZ
LYS
7
1
Y
1
A
NZ
LYS
28
A
NZ
LYS
29
1
Y
1
A
CG
ASP
53
A
CG
ASP
54
1
Y
1
A
OD1
ASP
53
A
OD1
ASP
54
1
Y
1
A
OD2
ASP
53
A
OD2
ASP
54
1
Y
1
A
ASP
18
-154.54
66.66
16.79
0.82000
0.00000
0.00000
0.29600
0.00000
0.42500
0.156
0.145
0.145
1.10
24.51
1107
21691
5.100
98.2
0.100
1
1.350
MOLECULAR REPLACEMENT
12.770
0.90
1.11
PDB entry 1BRF
ML
FLAT BULK SOLVENT MODEL
40.91
0.45
-0.25000
0.00000
0.00000
0.82800
0.00000
1.53600
0.202
0.187
0.188
1.66
27.40
209
4602
4.540
69.7
2
1.090
0.90
1.11
ML
FLAT BULK SOLVENT MODEL
41.30
0.60
1.10
24.51
37
452
1
0
414
0.014
856
1.426
1486
18.003
199
0.095
61
0.011
129
0.2060
0.2180
1.1500
144
2467
96.00
0.1860
0.1730
1.2110
147
2533
99.00
0.1860
0.1500
1.2870
128
2549
99.00
0.1430
0.1330
1.3860
141
2548
99.00
0.1410
0.1240
1.5250
155
2563
99.00
0.1340
0.1140
1.7460
141
2596
99.00
0.1590
0.1210
2.2000
120
2633
99.00
0.1440
0.1550
24.5140
131
2695
97.00
0.2020
0.1870
27.4060
209
4393
70.00
1.1
27.4
3KYY
21725
1
data processing
Phil R. Evans
pre@mrc-lmb.cam.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/scala.html
SCALA
other
refinement
Paul D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
data extraction
PDB
help@deposit.rcsb.org
June 11, 2008
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.005
data reduction
LAUEGEN
data scaling
SCALA
Joint Xray/neutron crystal structure determination of H-labeled perdeuterated rubredoxin at 295K
1
N
N
2
N
N
3
N
N
A
ASP
18
A
ASP
19
HELX_P
A
GLY
22
A
GLY
23
5
1
5
A
LYS
28
A
LYS
29
HELX_P
A
LEU
32
A
LEU
33
5
2
5
A
PRO
44
A
PRO
45
HELX_P
A
SER
46
A
SER
47
5
3
3
metalc
2.298
A
CYS
5
A
SG
CYS
6
1_555
A
FE
54
B
FE
FE
1_555
metalc
2.272
A
CYS
8
A
SG
CYS
9
1_555
A
FE
54
B
FE
FE
1_555
metalc
2.308
A
CYS
38
A
SG
CYS
39
1_555
A
FE
54
B
FE
FE
1_555
metalc
2.263
A
CYS
41
A
SG
CYS
42
1_555
A
FE
54
B
FE
FE
1_555
ELECTRON TRANSPORT
joint x-ray neutron refinement, Electron transport, Iron, Metal-binding, Transport
RUBR_PYRFU
UNP
1
1
P24297
MAKWVCKICGYIYDEDAGDPDNGISPGTKFEELPDDWVCPICGAPKSEFEKLED
1
54
3KYY
0
53
P24297
A
1
1
54
3
anti-parallel
anti-parallel
A
ILE
11
A
ILE
12
A
ASP
13
A
ASP
14
A
LYS
2
A
LYS
3
A
CYS
5
A
CYS
6
A
PHE
48
A
PHE
49
A
LYS
50
A
LYS
51
BINDING SITE FOR RESIDUE FE A 54
A
FE
54
Software
4
A
CYS
5
A
CYS
6
4
1_555
A
CYS
8
A
CYS
9
4
1_555
A
CYS
38
A
CYS
39
4
1_555
A
CYS
41
A
CYS
42
4
1_555
19
P 21 21 21