0.027711 0.000000 0.001680 0.000000 0.014516 0.000000 0.000000 0.000000 0.019192 0.00000 0.00000 0.00000 Sivaraman, J. Husain, N. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 90.00 93.47 90.00 36.087 68.891 52.201 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C14 H20 N6 O5 S 384.411 n S-ADENOSYL-L-HOMOCYSTEINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK Nucleic Acids Res. NARHAD 0389 1362-4962 10.1093/nar/gkq122 20194115 Structural basis for the methylation of G1405 in 16S rRNA by aminoglycoside resistance methyltransferase Sgm from an antibiotic producer: a diversity of active sites in m7G methyltransferases. 2010 1 2008-06-06 MAD M x-ray 1 0.9785 1.0 0.9798 1.0 0.9600 1.0 X8C NSLS 0.9785, 0.9798, 0.9600 SYNCHROTRON NSLS BEAMLINE X8C 31865.662 Sisomicin-gentamicin resistance methylase Sgm 1 man polymer 384.411 S-ADENOSYL-L-HOMOCYSTEINE 1 syn non-polymer 18.015 water 196 nat water methyltransferase no yes HHHHHHH(MSE)TAPAADDRIDEIERAITKSRRYQTVAPATVRRLARAALVAARGDVPDAVKRTKRGLHEIYGAFLPPSP PNYAALLRHLDSAVDAGDDEAVRAALLRA(MSE)SVHISTRERLPHLDEFYRELFRHLPRPNTLRDLACGLNPLAAPW (MSE)GLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLKTLPCLETQQRGSGWEVIDIV NSPNIVVTFPTKSLGQRSKG(MSE)FQNYSQSFESQARERSCRIQRLEIGNELIYVIQK HHHHHHHMTAPAADDRIDEIERAITKSRRYQTVAPATVRRLARAALVAARGDVPDAVKRTKRGLHEIYGAFLPPSPPNYA ALLRHLDSAVDAGDDEAVRAALLRAMSVHISTRERLPHLDEFYRELFRHLPRPNTLRDLACGLNPLAAPWMGLPAETVYI ASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVVTFPTKSL GQRSKGMFQNYSQSFESQARERSCRIQRLEIGNELIYVIQK A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 1879 Micromonospora zionensis 562 Escherichia coli BL21 (DE3) 1 2.03 39.48 Hanging Drop Hanging Drop, temperature 298K 298 software repository Initial release Version format compliance Refinement description 1 0 2010-06-02 1 1 2011-07-13 1 2 2017-11-01 _software.classification _software.contact_author _software.contact_author_email _software.date _software.language _software.location _software.name _software.type _software.version RCSB Y PDBJ 2010-01-11 REL REL SAH S-ADENOSYL-L-HOMOCYSTEINE HOH water SAH 6732 2 SAH SAH 6732 A TIP 1 3 HOH HOH 275 A TIP 2 3 HOH HOH 276 A TIP 3 3 HOH HOH 277 A TIP 4 3 HOH HOH 278 A TIP 5 3 HOH HOH 279 A TIP 6 3 HOH HOH 280 A TIP 7 3 HOH HOH 281 A TIP 8 3 HOH HOH 282 A TIP 9 3 HOH HOH 283 A TIP 10 3 HOH HOH 284 A TIP 11 3 HOH HOH 285 A TIP 12 3 HOH HOH 286 A TIP 13 3 HOH HOH 287 A TIP 14 3 HOH HOH 288 A TIP 15 3 HOH HOH 289 A TIP 16 3 HOH HOH 290 A TIP 17 3 HOH HOH 291 A TIP 18 3 HOH HOH 292 A TIP 19 3 HOH HOH 293 A TIP 20 3 HOH HOH 294 A TIP 21 3 HOH HOH 295 A TIP 22 3 HOH HOH 296 A TIP 23 3 HOH HOH 297 A TIP 24 3 HOH HOH 298 A TIP 25 3 HOH HOH 299 A TIP 26 3 HOH HOH 300 A TIP 27 3 HOH HOH 301 A TIP 28 3 HOH HOH 302 A TIP 29 3 HOH HOH 303 A TIP 30 3 HOH HOH 304 A TIP 31 3 HOH HOH 305 A TIP 32 3 HOH HOH 306 A TIP 33 3 HOH HOH 307 A TIP 34 3 HOH HOH 308 A TIP 35 3 HOH HOH 309 A TIP 36 3 HOH HOH 310 A TIP 37 3 HOH HOH 311 A TIP 38 3 HOH HOH 312 A TIP 39 3 HOH HOH 313 A TIP 40 3 HOH HOH 314 A TIP 41 3 HOH HOH 315 A TIP 42 3 HOH HOH 316 A TIP 43 3 HOH HOH 317 A TIP 44 3 HOH HOH 318 A TIP 45 3 HOH HOH 319 A TIP 46 3 HOH HOH 320 A TIP 47 3 HOH HOH 321 A TIP 48 3 HOH HOH 322 A TIP 49 3 HOH HOH 323 A TIP 50 3 HOH HOH 324 A TIP 51 3 HOH HOH 325 A TIP 52 3 HOH HOH 326 A TIP 53 3 HOH HOH 327 A TIP 54 3 HOH HOH 328 A TIP 55 3 HOH HOH 329 A TIP 56 3 HOH HOH 330 A TIP 57 3 HOH HOH 331 A TIP 58 3 HOH HOH 332 A TIP 59 3 HOH HOH 333 A TIP 60 3 HOH HOH 334 A TIP 61 3 HOH HOH 335 A TIP 62 3 HOH HOH 336 A TIP 63 3 HOH HOH 337 A TIP 64 3 HOH HOH 338 A TIP 65 3 HOH HOH 339 A TIP 66 3 HOH HOH 340 A TIP 67 3 HOH HOH 341 A TIP 68 3 HOH HOH 342 A TIP 69 3 HOH HOH 343 A TIP 70 3 HOH HOH 344 A TIP 71 3 HOH HOH 345 A TIP 72 3 HOH HOH 346 A TIP 73 3 HOH HOH 347 A TIP 74 3 HOH HOH 348 A TIP 75 3 HOH HOH 349 A TIP 76 3 HOH HOH 350 A TIP 77 3 HOH HOH 351 A TIP 78 3 HOH HOH 352 A TIP 79 3 HOH HOH 353 A TIP 80 3 HOH HOH 354 A TIP 81 3 HOH HOH 355 A TIP 82 3 HOH HOH 356 A TIP 83 3 HOH HOH 357 A TIP 84 3 HOH HOH 358 A TIP 85 3 HOH HOH 359 A TIP 86 3 HOH HOH 360 A TIP 87 3 HOH HOH 361 A TIP 88 3 HOH HOH 362 A TIP 89 3 HOH HOH 363 A TIP 90 3 HOH HOH 364 A TIP 91 3 HOH HOH 365 A TIP 92 3 HOH HOH 366 A TIP 93 3 HOH HOH 367 A TIP 94 3 HOH HOH 368 A TIP 95 3 HOH HOH 369 A TIP 96 3 HOH HOH 370 A TIP 97 3 HOH HOH 371 A TIP 98 3 HOH HOH 372 A TIP 99 3 HOH HOH 373 A TIP 100 3 HOH HOH 374 A TIP 101 3 HOH HOH 375 A TIP 102 3 HOH HOH 376 A TIP 103 3 HOH HOH 377 A TIP 104 3 HOH HOH 378 A TIP 105 3 HOH HOH 379 A TIP 106 3 HOH HOH 380 A TIP 107 3 HOH HOH 381 A TIP 108 3 HOH HOH 382 A TIP 109 3 HOH HOH 383 A TIP 110 3 HOH HOH 384 A TIP 111 3 HOH HOH 385 A TIP 112 3 HOH HOH 386 A TIP 113 3 HOH HOH 387 A TIP 114 3 HOH HOH 388 A TIP 115 3 HOH HOH 389 A TIP 116 3 HOH HOH 390 A TIP 117 3 HOH HOH 391 A TIP 118 3 HOH HOH 392 A TIP 119 3 HOH HOH 393 A TIP 120 3 HOH HOH 394 A TIP 121 3 HOH HOH 395 A TIP 122 3 HOH HOH 396 A TIP 123 3 HOH HOH 397 A TIP 124 3 HOH HOH 398 A TIP 125 3 HOH HOH 399 A TIP 126 3 HOH HOH 400 A TIP 127 3 HOH HOH 401 A TIP 128 3 HOH HOH 402 A TIP 129 3 HOH HOH 403 A TIP 130 3 HOH HOH 404 A TIP 131 3 HOH HOH 405 A TIP 132 3 HOH HOH 406 A TIP 133 3 HOH HOH 407 A TIP 134 3 HOH HOH 408 A TIP 136 3 HOH HOH 409 A TIP 137 3 HOH HOH 410 A TIP 138 3 HOH HOH 411 A TIP 139 3 HOH HOH 412 A TIP 140 3 HOH HOH 413 A TIP 141 3 HOH HOH 414 A TIP 142 3 HOH HOH 415 A TIP 143 3 HOH HOH 416 A TIP 144 3 HOH HOH 417 A TIP 145 3 HOH HOH 418 A TIP 146 3 HOH HOH 419 A TIP 147 3 HOH HOH 420 A TIP 149 3 HOH HOH 421 A TIP 150 3 HOH HOH 422 A TIP 151 3 HOH HOH 423 A TIP 152 3 HOH HOH 424 A TIP 153 3 HOH HOH 425 A TIP 154 3 HOH HOH 426 A TIP 155 3 HOH HOH 427 A TIP 156 3 HOH HOH 428 A TIP 157 3 HOH HOH 429 A TIP 158 3 HOH HOH 430 A TIP 159 3 HOH HOH 431 A TIP 160 3 HOH HOH 432 A TIP 161 3 HOH HOH 433 A TIP 162 3 HOH HOH 434 A TIP 163 3 HOH HOH 435 A TIP 164 3 HOH HOH 436 A TIP 165 3 HOH HOH 437 A TIP 166 3 HOH HOH 438 A TIP 167 3 HOH HOH 439 A TIP 168 3 HOH HOH 440 A TIP 169 3 HOH HOH 441 A TIP 170 3 HOH HOH 442 A TIP 171 3 HOH HOH 443 A TIP 172 3 HOH HOH 444 A TIP 173 3 HOH HOH 445 A TIP 174 3 HOH HOH 446 A TIP 175 3 HOH HOH 447 A TIP 176 3 HOH HOH 448 A TIP 177 3 HOH HOH 449 A TIP 178 3 HOH HOH 450 A TIP 179 3 HOH HOH 451 A TIP 180 3 HOH HOH 452 A TIP 181 3 HOH HOH 453 A TIP 182 3 HOH HOH 454 A TIP 183 3 HOH HOH 455 A TIP 184 3 HOH HOH 456 A TIP 185 3 HOH HOH 457 A TIP 186 3 HOH HOH 458 A TIP 187 3 HOH HOH 459 A TIP 188 3 HOH HOH 460 A TIP 189 3 HOH HOH 461 A TIP 190 3 HOH HOH 462 A TIP 191 3 HOH HOH 463 A TIP 192 3 HOH HOH 464 A TIP 193 3 HOH HOH 465 A TIP 194 3 HOH HOH 466 A TIP 195 3 HOH HOH 467 A TIP 196 3 HOH HOH 468 A TIP 197 3 HOH HOH 469 A TIP 198 3 HOH HOH 470 A n 1 -6 A n 2 -5 A n 3 -4 A n 4 -3 A n 5 -2 A n 6 -1 A n 7 0 A n 8 1 A n 9 2 A n 10 3 A n 11 4 A n 12 5 A n 13 6 A n 14 7 A ASP 8 n 15 ASP 8 A ARG 9 n 16 ARG 9 A ILE 10 n 17 ILE 10 A ASP 11 n 18 ASP 11 A GLU 12 n 19 GLU 12 A ILE 13 n 20 ILE 13 A GLU 14 n 21 GLU 14 A ARG 15 n 22 ARG 15 A ALA 16 n 23 ALA 16 A ILE 17 n 24 ILE 17 A THR 18 n 25 THR 18 A LYS 19 n 26 LYS 19 A SER 20 n 27 SER 20 A ARG 21 n 28 ARG 21 A ARG 22 n 29 ARG 22 A TYR 23 n 30 TYR 23 A GLN 24 n 31 GLN 24 A THR 25 n 32 THR 25 A VAL 26 n 33 VAL 26 A ALA 27 n 34 ALA 27 A PRO 28 n 35 PRO 28 A ALA 29 n 36 ALA 29 A THR 30 n 37 THR 30 A VAL 31 n 38 VAL 31 A ARG 32 n 39 ARG 32 A ARG 33 n 40 ARG 33 A LEU 34 n 41 LEU 34 A ALA 35 n 42 ALA 35 A ARG 36 n 43 ARG 36 A ALA 37 n 44 ALA 37 A ALA 38 n 45 ALA 38 A LEU 39 n 46 LEU 39 A VAL 40 n 47 VAL 40 A ALA 41 n 48 ALA 41 A ALA 42 n 49 ALA 42 A ARG 43 n 50 ARG 43 A GLY 44 n 51 GLY 44 A ASP 45 n 52 ASP 45 A VAL 46 n 53 VAL 46 A PRO 47 n 54 PRO 47 A ASP 48 n 55 ASP 48 A ALA 49 n 56 ALA 49 A VAL 50 n 57 VAL 50 A LYS 51 n 58 LYS 51 A ARG 52 n 59 ARG 52 A THR 53 n 60 THR 53 A LYS 54 n 61 LYS 54 A ARG 55 n 62 ARG 55 A GLY 56 n 63 GLY 56 A LEU 57 n 64 LEU 57 A HIS 58 n 65 HIS 58 A GLU 59 n 66 GLU 59 A ILE 60 n 67 ILE 60 A TYR 61 n 68 TYR 61 A GLY 62 n 69 GLY 62 A ALA 63 n 70 ALA 63 A PHE 64 n 71 PHE 64 A LEU 65 n 72 LEU 65 A PRO 66 n 73 PRO 66 A PRO 67 n 74 PRO 67 A SER 68 n 75 SER 68 A PRO 69 n 76 PRO 69 A PRO 70 n 77 PRO 70 A ASN 71 n 78 ASN 71 A TYR 72 n 79 TYR 72 A ALA 73 n 80 ALA 73 A ALA 74 n 81 ALA 74 A LEU 75 n 82 LEU 75 A LEU 76 n 83 LEU 76 A ARG 77 n 84 ARG 77 A HIS 78 n 85 HIS 78 A LEU 79 n 86 LEU 79 A ASP 80 n 87 ASP 80 A SER 81 n 88 SER 81 A ALA 82 n 89 ALA 82 A VAL 83 n 90 VAL 83 A ASP 84 n 91 ASP 84 A ALA 85 n 92 ALA 85 A GLY 86 n 93 GLY 86 A ASP 87 n 94 ASP 87 A ASP 88 n 95 ASP 88 A GLU 89 n 96 GLU 89 A ALA 90 n 97 ALA 90 A VAL 91 n 98 VAL 91 A ARG 92 n 99 ARG 92 A ALA 93 n 100 ALA 93 A ALA 94 n 101 ALA 94 A LEU 95 n 102 LEU 95 A LEU 96 n 103 LEU 96 A ARG 97 n 104 ARG 97 A ALA 98 n 105 ALA 98 A MSE 99 n 106 MSE 99 A SER 100 n 107 SER 100 A VAL 101 n 108 VAL 101 A HIS 102 n 109 HIS 102 A ILE 103 n 110 ILE 103 A SER 104 n 111 SER 104 A THR 105 n 112 THR 105 A ARG 106 n 113 ARG 106 A GLU 107 n 114 GLU 107 A ARG 108 n 115 ARG 108 A LEU 109 n 116 LEU 109 A PRO 110 n 117 PRO 110 A HIS 111 n 118 HIS 111 A LEU 112 n 119 LEU 112 A ASP 113 n 120 ASP 113 A GLU 114 n 121 GLU 114 A PHE 115 n 122 PHE 115 A TYR 116 n 123 TYR 116 A ARG 117 n 124 ARG 117 A GLU 118 n 125 GLU 118 A LEU 119 n 126 LEU 119 A PHE 120 n 127 PHE 120 A ARG 121 n 128 ARG 121 A HIS 122 n 129 HIS 122 A LEU 123 n 130 LEU 123 A PRO 124 n 131 PRO 124 A ARG 125 n 132 ARG 125 A PRO 126 n 133 PRO 126 A ASN 127 n 134 ASN 127 A THR 128 n 135 THR 128 A LEU 129 n 136 LEU 129 A ARG 130 n 137 ARG 130 A ASP 131 n 138 ASP 131 A LEU 132 n 139 LEU 132 A ALA 133 n 140 ALA 133 A CYS 134 n 141 CYS 134 A GLY 135 n 142 GLY 135 A LEU 136 n 143 LEU 136 A ASN 137 n 144 ASN 137 A PRO 138 n 145 PRO 138 A LEU 139 n 146 LEU 139 A ALA 140 n 147 ALA 140 A ALA 141 n 148 ALA 141 A PRO 142 n 149 PRO 142 A TRP 143 n 150 TRP 143 A MSE 144 n 151 MSE 144 A GLY 145 n 152 GLY 145 A LEU 146 n 153 LEU 146 A PRO 147 n 154 PRO 147 A ALA 148 n 155 ALA 148 A GLU 149 n 156 GLU 149 A THR 150 n 157 THR 150 A VAL 151 n 158 VAL 151 A TYR 152 n 159 TYR 152 A ILE 153 n 160 ILE 153 A ALA 154 n 161 ALA 154 A SER 155 n 162 SER 155 A ASP 156 n 163 ASP 156 A ILE 157 n 164 ILE 157 A ASP 158 n 165 ASP 158 A ALA 159 n 166 ALA 159 A ARG 160 n 167 ARG 160 A LEU 161 n 168 LEU 161 A VAL 162 n 169 VAL 162 A GLY 163 n 170 GLY 163 A PHE 164 n 171 PHE 164 A VAL 165 n 172 VAL 165 A ASP 166 n 173 ASP 166 A GLU 167 n 174 GLU 167 A ALA 168 n 175 ALA 168 A LEU 169 n 176 LEU 169 A THR 170 n 177 THR 170 A ARG 171 n 178 ARG 171 A LEU 172 n 179 LEU 172 A ASN 173 n 180 ASN 173 A VAL 174 n 181 VAL 174 A PRO 175 n 182 PRO 175 A HIS 176 n 183 HIS 176 A ARG 177 n 184 ARG 177 A THR 178 n 185 THR 178 A ASN 179 n 186 ASN 179 A VAL 180 n 187 VAL 180 A ALA 181 n 188 ALA 181 A ASP 182 n 189 ASP 182 A LEU 183 n 190 LEU 183 A LEU 184 n 191 LEU 184 A GLU 185 n 192 GLU 185 A ASP 186 n 193 ASP 186 A ARG 187 n 194 ARG 187 A LEU 188 n 195 LEU 188 A ASP 189 n 196 ASP 189 A GLU 190 n 197 GLU 190 A PRO 191 n 198 PRO 191 A ALA 192 n 199 ALA 192 A ASP 193 n 200 ASP 193 A VAL 194 n 201 VAL 194 A THR 195 n 202 THR 195 A LEU 196 n 203 LEU 196 A LEU 197 n 204 LEU 197 A LEU 198 n 205 LEU 198 A LYS 199 n 206 LYS 199 A THR 200 n 207 THR 200 A LEU 201 n 208 LEU 201 A PRO 202 n 209 PRO 202 A CYS 203 n 210 CYS 203 A LEU 204 n 211 LEU 204 A GLU 205 n 212 GLU 205 A THR 206 n 213 THR 206 A GLN 207 n 214 GLN 207 A GLN 208 n 215 GLN 208 A ARG 209 n 216 ARG 209 A GLY 210 n 217 GLY 210 A SER 211 n 218 SER 211 A GLY 212 n 219 GLY 212 A TRP 213 n 220 TRP 213 A GLU 214 n 221 GLU 214 A VAL 215 n 222 VAL 215 A ILE 216 n 223 ILE 216 A ASP 217 n 224 ASP 217 A ILE 218 n 225 ILE 218 A VAL 219 n 226 VAL 219 A ASN 220 n 227 ASN 220 A SER 221 n 228 SER 221 A PRO 222 n 229 PRO 222 A ASN 223 n 230 ASN 223 A ILE 224 n 231 ILE 224 A VAL 225 n 232 VAL 225 A VAL 226 n 233 VAL 226 A THR 227 n 234 THR 227 A PHE 228 n 235 PHE 228 A PRO 229 n 236 PRO 229 A THR 230 n 237 THR 230 A LYS 231 n 238 LYS 231 A n 239 232 A n 240 233 A n 241 234 A n 242 235 A n 243 236 A n 244 237 A n 245 238 A GLY 239 n 246 GLY 239 A MSE 240 n 247 MSE 240 A PHE 241 n 248 PHE 241 A GLN 242 n 249 GLN 242 A ASN 243 n 250 ASN 243 A TYR 244 n 251 TYR 244 A SER 245 n 252 SER 245 A GLN 246 n 253 GLN 246 A SER 247 n 254 SER 247 A PHE 248 n 255 PHE 248 A GLU 249 n 256 GLU 249 A SER 250 n 257 SER 250 A GLN 251 n 258 GLN 251 A ALA 252 n 259 ALA 252 A ARG 253 n 260 ARG 253 A GLU 254 n 261 GLU 254 A ARG 255 n 262 ARG 255 A SER 256 n 263 SER 256 A CYS 257 n 264 CYS 257 A ARG 258 n 265 ARG 258 A ILE 259 n 266 ILE 259 A GLN 260 n 267 GLN 260 A ARG 261 n 268 ARG 261 A LEU 262 n 269 LEU 262 A GLU 263 n 270 GLU 263 A ILE 264 n 271 ILE 264 A GLY 265 n 272 GLY 265 A ASN 266 n 273 ASN 266 A GLU 267 n 274 GLU 267 A LEU 268 n 275 LEU 268 A ILE 269 n 276 ILE 269 A TYR 270 n 277 TYR 270 A VAL 271 n 278 VAL 271 A ILE 272 n 279 ILE 272 A GLN 273 n 280 GLN 273 A LYS 274 n 281 LYS 274 A author_and_software_defined_assembly PISA 1 monomeric A MSE 99 SELENOMETHIONINE A MSE 106 MET A MSE 144 SELENOMETHIONINE A MSE 151 MET A MSE 240 SELENOMETHIONINE A MSE 247 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ASN 179 A O ASN 186 A N ALA 154 A N ALA 161 A O ILE 153 A O ILE 160 A N LEU 129 A N LEU 136 A N ARG 130 A N ARG 137 A O LEU 196 A O LEU 203 A N LEU 197 A N LEU 204 A O VAL 225 A O VAL 232 A N ILE 224 A N ILE 231 A O ILE 272 A O ILE 279 A O ILE 269 A O ILE 276 A N LEU 262 A N LEU 269 1 A HIS -6 A HIS 1 1 Y 1 A HIS -5 A HIS 2 1 Y 1 A HIS -4 A HIS 3 1 Y 1 A HIS -3 A HIS 4 1 Y 1 A HIS -2 A HIS 5 1 Y 1 A HIS -1 A HIS 6 1 Y 1 A HIS 0 A HIS 7 1 Y 1 A MSE 1 A MSE 8 1 Y 1 A THR 2 A THR 9 1 Y 1 A ALA 3 A ALA 10 1 Y 1 A PRO 4 A PRO 11 1 Y 1 A ALA 5 A ALA 12 1 Y 1 A ALA 6 A ALA 13 1 Y 1 A ASP 7 A ASP 14 1 Y 1 A SER 232 A SER 239 1 Y 1 A LEU 233 A LEU 240 1 Y 1 A GLY 234 A GLY 241 1 Y 1 A GLN 235 A GLN 242 1 Y 1 A ARG 236 A ARG 243 1 Y 1 A SER 237 A SER 244 1 Y 1 A LYS 238 A LYS 245 1 Y 1 A A O O PRO ALA 138 140 2.16 1 -16.65 2.70 111.00 94.35 A A A N CA C ASN ASN ASN 127 127 127 N 1 -18.76 2.70 111.00 92.24 A A A N CA C ALA ALA ALA 140 140 140 N 1 A THR 18 -62.05 5.67 1 A LYS 19 -7.56 93.89 1 A ARG 21 87.45 -104.87 1 A TYR 61 -134.49 -64.88 1 A THR 128 91.55 113.27 1 A ALA 141 145.46 -45.07 1 A GLU 185 -145.25 -42.01 1 A ASN 266 -96.34 37.33 protein_rep.param water_rep.param SAHnew.param 117.31 26.53 8.05 3.697 0.000 0.912 1.295 0.000 -4.992 0.2586 0.2046 0.2046 2.10 50.00 1679 26514 5.7 90.5 1.00 0.52 1 MAD 41.24 2.10 50.00 196 2282 26 0 2060 2.10 50.00 3LCU 33837 28242 1 83.5 data reduction Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ DENZO package data scaling Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ SCALEPACK package refinement Axel T. Brunger axel.brunger@yale.edu Fortran_77 http://cns-online.org/ CNS package data extraction PDB help@deposit.rcsb.org June 11, 2008 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.005 Sisomicin-gentamicin resistance methylase Sgm Crystal Structure of Antibiotic related Methyltransferase 1 N N 2 N N 3 N N A ASP 8 A ASP 15 HELX_P A THR 18 A THR 25 1 1 11 A ALA 27 A ALA 34 HELX_P A ALA 42 A ALA 49 1 2 16 A ASP 45 A ASP 52 HELX_P A TYR 61 A TYR 68 1 3 17 A ASN 71 A ASN 78 HELX_P A ALA 85 A ALA 92 1 4 15 A ASP 87 A ASP 94 HELX_P A SER 100 A SER 107 1 5 14 A HIS 102 A HIS 109 HELX_P A GLU 107 A GLU 114 1 6 6 A ARG 108 A ARG 115 HELX_P A PRO 110 A PRO 117 5 7 3 A HIS 111 A HIS 118 HELX_P A PHE 120 A PHE 127 1 8 10 A ARG 121 A ARG 128 HELX_P A LEU 123 A LEU 130 5 9 3 A LEU 136 A LEU 143 HELX_P A ALA 140 A ALA 147 5 10 5 A ASP 158 A ASP 165 HELX_P A LEU 172 A LEU 179 1 11 15 A THR 200 A THR 207 HELX_P A GLN 208 A GLN 215 1 12 9 A GLY 210 A GLY 217 HELX_P A VAL 219 A VAL 226 1 13 10 A GLY 239 A GLY 246 HELX_P A GLU 254 A GLU 261 1 14 16 covale 1.331 A ALA 98 A C ALA 105 1_555 A MSE 99 A N MSE 106 1_555 covale 1.333 A MSE 99 A C MSE 106 1_555 A SER 100 A N SER 107 1_555 covale 1.327 A TRP 143 A C TRP 150 1_555 A MSE 144 A N MSE 151 1_555 covale 1.332 A MSE 144 A C MSE 151 1_555 A GLY 145 A N GLY 152 1_555 covale 1.327 A GLY 239 A C GLY 246 1_555 A MSE 240 A N MSE 247 1_555 covale 1.331 A MSE 240 A C MSE 247 1_555 A PHE 241 A N PHE 248 1_555 TRANSFERASE Antibiotic Resistance, Methyltransferase, TRANSFERASE Q7M0R2_9ACTO UNP 1 1 Q7M0R2 MTAPAADDRIDEIERAITKSRRYQTVAPATVRRLARAALVAARGDVPDAVKRTKRGLHEIYGAFLPPSPPNYAALLRHLD SAVDAGDDEAVRAALLRAMSVHISTRERLPHLDEFYRELFRHLPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDAR LVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGM FQNYSQSFESQARERSCRIQRLEIGNELIYVIQK 1 274 3LCU 1 274 Q7M0R2 A 1 8 281 1 EXPRESSION TAG HIS -6 3LCU A Q7M0R2 UNP 1 1 EXPRESSION TAG HIS -5 3LCU A Q7M0R2 UNP 2 1 EXPRESSION TAG HIS -4 3LCU A Q7M0R2 UNP 3 1 EXPRESSION TAG HIS -3 3LCU A Q7M0R2 UNP 4 1 EXPRESSION TAG HIS -2 3LCU A Q7M0R2 UNP 5 1 EXPRESSION TAG HIS -1 3LCU A Q7M0R2 UNP 6 1 EXPRESSION TAG HIS 0 3LCU A Q7M0R2 UNP 7 7 parallel parallel parallel parallel anti-parallel anti-parallel A HIS 176 A HIS 183 A VAL 180 A VAL 187 A TYR 152 A TYR 159 A ASP 156 A ASP 163 A LEU 129 A LEU 136 A ASP 131 A ASP 138 A VAL 194 A VAL 201 A LEU 197 A LEU 204 A ASN 223 A ASN 230 A PRO 229 A PRO 236 A GLU 267 A GLU 274 A GLN 273 A GLN 280 A ARG 258 A ARG 265 A ILE 264 A ILE 271 BINDING SITE FOR RESIDUE SAH A 6732 Software 19 A ILE 60 A ILE 67 19 1_555 A TYR 61 A TYR 68 19 1_555 A HIS 102 A HIS 109 19 1_555 A SER 104 A SER 111 19 1_555 A THR 105 A THR 112 19 1_555 A ARG 108 A ARG 115 19 1_555 A ALA 133 A ALA 140 19 1_555 A CYS 134 A CYS 141 19 1_555 A ASP 156 A ASP 163 19 1_555 A ILE 157 A ILE 164 19 1_555 A ALA 181 A ALA 188 19 1_555 A ASP 182 A ASP 189 19 1_555 A LEU 183 A LEU 190 19 1_555 A LEU 198 A LEU 205 19 1_555 A LYS 199 A LYS 206 19 1_555 A GLN 207 A GLN 214 19 1_555 A HOH 280 C HOH 19 1_555 A HOH 447 C HOH 19 1_555 A HOH 470 C HOH 19 1_555 4 P 1 21 1