0.014155 0.008172 0.000000 0.000000 0.016345 0.000000 0.000000 0.000000 0.008330 0.000000 0.000000 0.000000 Sohn, J. Grant, R.A. Sauer, R.T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 9 90.000 90.000 120.000 70.647 70.647 120.054 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N N N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C N 221 N C N 222 N S N 223 N C N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N N N 237 S C N 238 N C N 239 N O N 240 N C Y 241 N C Y 242 N C Y 243 N C Y 244 N C Y 245 N C Y 246 N C N 247 N O N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N N N 260 S C N 261 N C N 262 N O N 263 N C N 264 N C N 265 N C N 266 N O N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N N N 277 S C N 278 N C N 279 N O N 280 N C N 281 N O N 282 N O N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 R C N 295 N O N 296 N C N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 N C Y 312 N C Y 313 N C Y 314 N C Y 315 N C Y 316 N C Y 317 N C N 318 N O N 319 N O N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N N N 332 S C N 333 N C N 334 N O N 335 N C N 336 N C N 337 N C N 338 N O N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing Y 235 N doub Y 236 N sing Y 237 N sing N 238 N sing Y 239 N doub N 240 N sing Y 241 N doub N 242 N sing Y 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N sing Y 304 N doub Y 305 N sing Y 306 N sing N 307 N sing Y 308 N doub N 309 N sing Y 310 N doub N 311 N sing Y 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N doub N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing US J.Biol.Chem. JBCHA3 0071 0021-9258 285 34039 34047 10.1074/jbc.M110.135541 20739286 Allostery is an intrinsic property of the protease domain of DegS: implications for enzyme function and evolution. 2010 10.2210/pdb3lgt/pdb pdb_00003lgt 100 1 Varimax-HR IMAGE PLATE 2009-04-10 RIGAKU RAXIS IV Varimax-HF SINGLE WAVELENGTH M x-ray 1 1.5416 1.0 1.5416 ROTATING ANODE RIGAKU MICROMAX-007 HF 25757.049 Protease degS 3.4.21.- protease domain Y162A, H198P 1 man polymer 18.015 water 10 nat water no no MRGSHHHHHHGRSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNK HVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPANLGQTITQGIISA TGRIGLNPTGRQNFLQTDASINPGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVI R MRGSHHHHHHGRSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNK HVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPANLGQTITQGIISA TGRIGLNPTGRQNFLQTDASINPGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVI R A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n K12 sample b3235, degS, hhoB, htrH, JW3204 83333 Escherichia coli 562 Escherichia coli X90(DE3) plasmid pET21b 1 2.24 45.05 VAPOR DIFFUSION, SITTING DROP 6.5 50 mM Sodium Cacodylate, 50-125 mM Sodium Citrate, 10-20% isopropanol, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 300K 300 software audit_author database_2 struct_ref_seq_dif chem_comp_atom chem_comp_bond repository Initial release Version format compliance Refinement description Structure summary Database references Data collection 1 0 2010-08-25 1 1 2011-07-13 1 2 2017-11-01 1 3 2018-01-24 1 4 2021-10-13 1 5 2024-02-21 _audit_author.name _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details high resolution wild type structure of same domain RCSB Y RCSB 2010-01-21 REL REL HOH water HOH 1 2 HOH HOH 1 A HOH 2 2 HOH HOH 2 A HOH 3 2 HOH HOH 3 A HOH 4 2 HOH HOH 4 A HOH 5 2 HOH HOH 5 A HOH 6 2 HOH HOH 6 A HOH 7 2 HOH HOH 7 A HOH 8 2 HOH HOH 8 A HOH 9 2 HOH HOH 9 A HOH 10 2 HOH HOH 10 A n 1 16 A n 2 17 A n 3 18 A n 4 19 A n 5 20 A n 6 21 A n 7 22 A n 8 23 A n 9 24 A n 10 25 A n 11 26 A n 12 27 A n 13 28 A n 14 29 A n 15 30 A n 16 31 A n 17 32 A n 18 33 A n 19 34 A n 20 35 A n 21 36 A n 22 37 A n 23 38 A SER 39 n 24 SER 39 A THR 40 n 25 THR 40 A ASP 41 n 26 ASP 41 A GLU 42 n 27 GLU 42 A THR 43 n 28 THR 43 A PRO 44 n 29 PRO 44 A ALA 45 n 30 ALA 45 A SER 46 n 31 SER 46 A TYR 47 n 32 TYR 47 A ASN 48 n 33 ASN 48 A LEU 49 n 34 LEU 49 A ALA 50 n 35 ALA 50 A VAL 51 n 36 VAL 51 A ARG 52 n 37 ARG 52 A ARG 53 n 38 ARG 53 A ALA 54 n 39 ALA 54 A ALA 55 n 40 ALA 55 A PRO 56 n 41 PRO 56 A ALA 57 n 42 ALA 57 A VAL 58 n 43 VAL 58 A VAL 59 n 44 VAL 59 A ASN 60 n 45 ASN 60 A VAL 61 n 46 VAL 61 A TYR 62 n 47 TYR 62 A ASN 63 n 48 ASN 63 A ARG 64 n 49 ARG 64 A n 50 65 A n 51 66 A n 52 67 A n 53 68 A n 54 69 A n 55 70 A n 56 71 A n 57 72 A n 58 73 A n 59 74 A n 60 75 A ILE 76 n 61 ILE 76 A ARG 77 n 62 ARG 77 A THR 78 n 63 THR 78 A LEU 79 n 64 LEU 79 A GLY 80 n 65 GLY 80 A SER 81 n 66 SER 81 A GLY 82 n 67 GLY 82 A VAL 83 n 68 VAL 83 A ILE 84 n 69 ILE 84 A MET 85 n 70 MET 85 A ASP 86 n 71 ASP 86 A GLN 87 n 72 GLN 87 A ARG 88 n 73 ARG 88 A GLY 89 n 74 GLY 89 A TYR 90 n 75 TYR 90 A ILE 91 n 76 ILE 91 A ILE 92 n 77 ILE 92 A THR 93 n 78 THR 93 A ASN 94 n 79 ASN 94 A LYS 95 n 80 LYS 95 A HIS 96 n 81 HIS 96 A VAL 97 n 82 VAL 97 A ILE 98 n 83 ILE 98 A ASN 99 n 84 ASN 99 A ASP 100 n 85 ASP 100 A ALA 101 n 86 ALA 101 A ASP 102 n 87 ASP 102 A GLN 103 n 88 GLN 103 A ILE 104 n 89 ILE 104 A ILE 105 n 90 ILE 105 A VAL 106 n 91 VAL 106 A ALA 107 n 92 ALA 107 A LEU 108 n 93 LEU 108 A GLN 109 n 94 GLN 109 A ASP 110 n 95 ASP 110 A GLY 111 n 96 GLY 111 A ARG 112 n 97 ARG 112 A VAL 113 n 98 VAL 113 A PHE 114 n 99 PHE 114 A GLU 115 n 100 GLU 115 A ALA 116 n 101 ALA 116 A LEU 117 n 102 LEU 117 A LEU 118 n 103 LEU 118 A VAL 119 n 104 VAL 119 A GLY 120 n 105 GLY 120 A SER 121 n 106 SER 121 A ASP 122 n 107 ASP 122 A SER 123 n 108 SER 123 A LEU 124 n 109 LEU 124 A THR 125 n 110 THR 125 A ASP 126 n 111 ASP 126 A LEU 127 n 112 LEU 127 A ALA 128 n 113 ALA 128 A VAL 129 n 114 VAL 129 A LEU 130 n 115 LEU 130 A LYS 131 n 116 LYS 131 A ILE 132 n 117 ILE 132 A ASN 133 n 118 ASN 133 A ALA 134 n 119 ALA 134 A THR 135 n 120 THR 135 A GLY 136 n 121 GLY 136 A GLY 137 n 122 GLY 137 A LEU 138 n 123 LEU 138 A PRO 139 n 124 PRO 139 A THR 140 n 125 THR 140 A ILE 141 n 126 ILE 141 A PRO 142 n 127 PRO 142 A ILE 143 n 128 ILE 143 A ASN 144 n 129 ASN 144 A ALA 145 n 130 ALA 145 A ARG 146 n 131 ARG 146 A ARG 147 n 132 ARG 147 A VAL 148 n 133 VAL 148 A PRO 149 n 134 PRO 149 A HIS 150 n 135 HIS 150 A ILE 151 n 136 ILE 151 A GLY 152 n 137 GLY 152 A ASP 153 n 138 ASP 153 A VAL 154 n 139 VAL 154 A VAL 155 n 140 VAL 155 A LEU 156 n 141 LEU 156 A ALA 157 n 142 ALA 157 A ILE 158 n 143 ILE 158 A GLY 159 n 144 GLY 159 A ASN 160 n 145 ASN 160 A PRO 161 n 146 PRO 161 A ALA 162 n 147 ALA 162 A n 148 163 A n 149 164 A GLY 165 n 150 GLY 165 A GLN 166 n 151 GLN 166 A THR 167 n 152 THR 167 A ILE 168 n 153 ILE 168 A THR 169 n 154 THR 169 A GLN 170 n 155 GLN 170 A GLY 171 n 156 GLY 171 A ILE 172 n 157 ILE 172 A ILE 173 n 158 ILE 173 A SER 174 n 159 SER 174 A ALA 175 n 160 ALA 175 A THR 176 n 161 THR 176 A GLY 177 n 162 GLY 177 A n 163 178 A n 164 179 A n 165 180 A n 166 181 A n 167 182 A n 168 183 A n 169 184 A n 170 185 A n 171 186 A n 172 187 A ASN 188 n 173 ASN 188 A PHE 189 n 174 PHE 189 A LEU 190 n 175 LEU 190 A GLN 191 n 176 GLN 191 A THR 192 n 177 THR 192 A ASP 193 n 178 ASP 193 A ALA 194 n 179 ALA 194 A SER 195 n 180 SER 195 A ILE 196 n 181 ILE 196 A ASN 197 n 182 ASN 197 A PRO 198 n 183 PRO 198 A GLY 199 n 184 GLY 199 A ASN 200 n 185 ASN 200 A SER 201 n 186 SER 201 A GLY 202 n 187 GLY 202 A GLY 203 n 188 GLY 203 A ALA 204 n 189 ALA 204 A LEU 205 n 190 LEU 205 A VAL 206 n 191 VAL 206 A ASN 207 n 192 ASN 207 A SER 208 n 193 SER 208 A LEU 209 n 194 LEU 209 A GLY 210 n 195 GLY 210 A GLU 211 n 196 GLU 211 A LEU 212 n 197 LEU 212 A MET 213 n 198 MET 213 A GLY 214 n 199 GLY 214 A ILE 215 n 200 ILE 215 A ASN 216 n 201 ASN 216 A THR 217 n 202 THR 217 A LEU 218 n 203 LEU 218 A SER 219 n 204 SER 219 A n 205 220 A n 206 221 A n 207 222 A n 208 223 A n 209 224 A n 210 225 A n 211 226 A n 212 227 A n 213 228 A n 214 229 A n 215 230 A GLY 231 n 216 GLY 231 A ILE 232 n 217 ILE 232 A GLY 233 n 218 GLY 233 A PHE 234 n 219 PHE 234 A ALA 235 n 220 ALA 235 A ILE 236 n 221 ILE 236 A PRO 237 n 222 PRO 237 A PHE 238 n 223 PHE 238 A GLN 239 n 224 GLN 239 A LEU 240 n 225 LEU 240 A ALA 241 n 226 ALA 241 A THR 242 n 227 THR 242 A LYS 243 n 228 LYS 243 A ILE 244 n 229 ILE 244 A MET 245 n 230 MET 245 A ASP 246 n 231 ASP 246 A LYS 247 n 232 LYS 247 A LEU 248 n 233 LEU 248 A ILE 249 n 234 ILE 249 A ARG 250 n 235 ARG 250 A ASP 251 n 236 ASP 251 A GLY 252 n 237 GLY 252 A ARG 253 n 238 ARG 253 A n 239 254 A n 240 255 A n 241 256 A author_defined_assembly 3 trimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -0.5000000000 -0.8660254038 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_665 -y+1,x-y+1,z crystal symmetry operation 35.3235000000 61.1820967012 0.0000000000 -0.5000000000 0.8660254038 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 3_565 -x+y,-x+1,z crystal symmetry operation -35.3235000000 61.1820967012 0.0000000000 A N ASN 63 A N ASN 48 A O ARG 77 A O ARG 62 A N VAL 83 A N VAL 68 A O ILE 92 A O ILE 77 A N ILE 91 A N ILE 76 A O LEU 130 A O LEU 115 A O VAL 129 A O VAL 114 A N VAL 119 A N VAL 104 A O ALA 116 A O ALA 101 A N ILE 104 A N ILE 89 A O ILE 105 A O ILE 90 A N TYR 62 A N TYR 47 A N GLY 159 A N GLY 144 A O THR 167 A O THR 152 A N ALA 175 A N ALA 160 A O GLN 191 A O GLN 176 A N THR 192 A N THR 177 A O GLY 233 A O GLY 218 A O PHE 234 A O PHE 219 A N THR 217 A N THR 202 A O MET 213 A O MET 198 A N LEU 205 A N LEU 190 A O VAL 206 A O VAL 191 A N LEU 156 A N LEU 141 1 A OG SER 39 A OG SER 24 1 Y 1 A CG ASP 41 A CG ASP 26 1 Y 1 A OD1 ASP 41 A OD1 ASP 26 1 Y 1 A OD2 ASP 41 A OD2 ASP 26 1 Y 1 A CG ARG 77 A CG ARG 62 1 Y 1 A CD ARG 77 A CD ARG 62 1 Y 1 A NE ARG 77 A NE ARG 62 1 Y 1 A CZ ARG 77 A CZ ARG 62 1 Y 1 A NH1 ARG 77 A NH1 ARG 62 1 Y 1 A NH2 ARG 77 A NH2 ARG 62 1 Y 1 A CG ARG 253 A CG ARG 238 1 Y 1 A CD ARG 253 A CD ARG 238 1 Y 1 A NE ARG 253 A NE ARG 238 1 Y 1 A CZ ARG 253 A CZ ARG 238 1 Y 1 A NH1 ARG 253 A NH1 ARG 238 1 Y 1 A NH2 ARG 253 A NH2 ARG 238 1 Y 1 A MET 16 A MET 1 1 Y 1 A ARG 17 A ARG 2 1 Y 1 A GLY 18 A GLY 3 1 Y 1 A SER 19 A SER 4 1 Y 1 A HIS 20 A HIS 5 1 Y 1 A HIS 21 A HIS 6 1 Y 1 A HIS 22 A HIS 7 1 Y 1 A HIS 23 A HIS 8 1 Y 1 A HIS 24 A HIS 9 1 Y 1 A HIS 25 A HIS 10 1 Y 1 A GLY 26 A GLY 11 1 Y 1 A ARG 27 A ARG 12 1 Y 1 A SER 28 A SER 13 1 Y 1 A LEU 29 A LEU 14 1 Y 1 A ASN 30 A ASN 15 1 Y 1 A PRO 31 A PRO 16 1 Y 1 A LEU 32 A LEU 17 1 Y 1 A SER 33 A SER 18 1 Y 1 A THR 34 A THR 19 1 Y 1 A PRO 35 A PRO 20 1 Y 1 A GLN 36 A GLN 21 1 Y 1 A PHE 37 A PHE 22 1 Y 1 A ASP 38 A ASP 23 1 Y 1 A GLY 65 A GLY 50 1 Y 1 A LEU 66 A LEU 51 1 Y 1 A ASN 67 A ASN 52 1 Y 1 A THR 68 A THR 53 1 Y 1 A ASN 69 A ASN 54 1 Y 1 A SER 70 A SER 55 1 Y 1 A HIS 71 A HIS 56 1 Y 1 A ASN 72 A ASN 57 1 Y 1 A GLN 73 A GLN 58 1 Y 1 A LEU 74 A LEU 59 1 Y 1 A GLU 75 A GLU 60 1 Y 1 A ASN 163 A ASN 148 1 Y 1 A LEU 164 A LEU 149 1 Y 1 A ARG 178 A ARG 163 1 Y 1 A ILE 179 A ILE 164 1 Y 1 A GLY 180 A GLY 165 1 Y 1 A LEU 181 A LEU 166 1 Y 1 A ASN 182 A ASN 167 1 Y 1 A PRO 183 A PRO 168 1 Y 1 A THR 184 A THR 169 1 Y 1 A GLY 185 A GLY 170 1 Y 1 A ARG 186 A ARG 171 1 Y 1 A GLN 187 A GLN 172 1 Y 1 A PHE 220 A PHE 205 1 Y 1 A ASP 221 A ASP 206 1 Y 1 A LYS 222 A LYS 207 1 Y 1 A SER 223 A SER 208 1 Y 1 A ASN 224 A ASN 209 1 Y 1 A ASP 225 A ASP 210 1 Y 1 A GLY 226 A GLY 211 1 Y 1 A GLU 227 A GLU 212 1 Y 1 A THR 228 A THR 213 1 Y 1 A PRO 229 A PRO 214 1 Y 1 A GLU 230 A GLU 215 1 Y 1 A VAL 254 A VAL 239 1 Y 1 A ILE 255 A ILE 240 1 Y 1 A ARG 256 A ARG 241 1 Y 1 A PRO 198 -37.77 -38.85 170.27 101.084 58.05 -31.177 -0.000 0.000 -31.177 -0.000 62.353 To obtain the best possible geometry, this structure was refined with hydrogens whose coordinates were determined by the attached heavy atom. Authors state that although hydrogens cannot be visualized at this resolution, they are present and contribute to scattering. The hydrogens are kept in this entry because independent assessment of many aspects of the geometry, including steric clashes, require their presence. Moreover, removing hydrogen atoms after refinement makes independent assessment of refinement statistics effectively irreproducible. 0.262 0.220 0.221 2.68 16.802 258 5868 4.400 93.510 1.00 0.50 0.719 0.270 1 1.97 MOLECULAR REPLACEMENT 0.900 1.110 ML FLAT BULK SOLVENT MODEL 60.783 0.340 2.68 16.802 10 1325 0 0 1315 0.004 1327 0.822 1802 0.039 226 0.005 234 15.052 471 0.321 0.245 2.77 134 2799 2933 2 93.000 0.244 0.212 16.802 124 2811 2935 2 94.000 2.670 50.000 3LGT 5910 0.035 1.045 1 20.900 4.500 93.700 0.212 2.67 2.77 492 0.691 3.70 80.90 0.150 2.77 2.88 574 0.696 3.90 88.90 0.131 2.88 3.01 600 0.816 4.20 96.30 0.088 3.01 3.17 648 0.830 4.60 99.80 0.069 3.17 3.36 636 0.891 4.80 100.00 0.066 3.36 3.62 592 1.253 4.70 96.40 0.059 3.62 3.99 515 2.261 4.00 82.30 0.029 3.99 4.56 611 1.038 4.80 97.30 0.026 4.56 5.75 628 1.029 4.90 97.70 0.023 5.75 50.00 614 1.068 4.90 97.20 data reduction Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ DENZO package data scaling Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ SCALEPACK package phasing Randy J. Read cimr-phaser@lists.cam.ac.uk http://www-structmed.cimr.cam.ac.uk/phaser/ PHASER program refinement Paul D. Adams PDAdams@lbl.gov C++ http://www.phenix-online.org/ PHENIX package 1.5_2 data extraction PDB help@deposit.rcsb.org June 11, 2008 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.005 data collection StructureStudio Y162A/H198P double mutant of DegS-deltaPDZ protease 1 N N 2 N N A TYR 47 A TYR 32 HELX_P A ALA 55 A ALA 40 1 1 9 A ASN 197 A ASN 182 HELX_P A SER 201 A SER 186 5 2 5 A PHE 238 A PHE 223 HELX_P A ASP 251 A ASP 236 1 3 14 HYDROLASE protease, stress-sensor, HtrA, PDZ OMP, Hydrolase, Serine protease DEGS_ECOLI UNP 1 27 P0AEE3 RSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIV ALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGR QNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIR 27 256 3LGT 27 256 P0AEE3 A 1 12 241 1 expression tag MET 16 3LGT A P0AEE3 UNP 1 1 expression tag ARG 17 3LGT A P0AEE3 UNP 2 1 expression tag GLY 18 3LGT A P0AEE3 UNP 3 1 expression tag SER 19 3LGT A P0AEE3 UNP 4 1 expression tag HIS 20 3LGT A P0AEE3 UNP 5 1 expression tag HIS 21 3LGT A P0AEE3 UNP 6 1 expression tag HIS 22 3LGT A P0AEE3 UNP 7 1 expression tag HIS 23 3LGT A P0AEE3 UNP 8 1 expression tag HIS 24 3LGT A P0AEE3 UNP 9 1 expression tag HIS 25 3LGT A P0AEE3 UNP 10 1 expression tag GLY 26 3LGT A P0AEE3 UNP 11 1 TYR engineered mutation ALA 162 3LGT A P0AEE3 UNP 162 147 1 HIS engineered mutation PRO 198 3LGT A P0AEE3 UNP 198 183 7 7 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A VAL 58 A VAL 43 A ASN 63 A ASN 48 A ARG 77 A ARG 62 A ILE 84 A ILE 69 A TYR 90 A TYR 75 A ASN 94 A ASN 79 A LEU 127 A LEU 112 A LYS 131 A LYS 116 A VAL 113 A VAL 98 A ASP 122 A ASP 107 A ILE 104 A ILE 89 A ALA 107 A ALA 92 A VAL 58 A VAL 43 A ASN 63 A ASN 48 A VAL 154 A VAL 139 A GLY 159 A GLY 144 A THR 167 A THR 152 A ALA 175 A ALA 160 A LEU 190 A LEU 175 A THR 192 A THR 177 A GLY 233 A GLY 218 A PRO 237 A PRO 222 A LEU 212 A LEU 197 A THR 217 A THR 202 A ALA 204 A ALA 189 A ASN 207 A ASN 192 A VAL 154 A VAL 139 A GLY 159 A GLY 144 146 H 3