0.006183
0.003570
0.000000
0.000000
0.007139
0.000000
0.000000
0.000000
0.006970
0.00000
0.00000
0.00000
Ekiert, D.C.
Wilson, I.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
161.745
161.745
143.473
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C6 H12 O6
180.156
beta-D-mannopyranose
D-saccharide, beta linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C6 H12 O6
180.156
alpha-D-mannopyranose
D-saccharide, alpha linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Science
SCIEAS
0038
0036-8075
328
357
360
10.1126/science.1186430
20339031
Structural basis of preexisting immunity to the 2009 H1N1 pandemic influenza virus.
2010
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
CCD
2009-03-01
MARMOSAIC 300 mm CCD
SINGLE WAVELENGTH
M
x-ray
1
1.0333
1.0
23-ID-B
APS
1.0333
SYNCHROTRON
APS BEAMLINE 23-ID-B
36452.797
Hemagglutinin, HA1 Subunit
Ectodomain HA1, residues 18-344
1
man
polymer
20394.445
Hemagglutinin, HA2 Subunit
Ectodomain HA2, residues 345-520
1
man
polymer
24699.842
2D1 Fab, Heavy Chain
1
man
polymer
22812.109
2D1 Fab, Light Chain
1
man
polymer
424.401
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
2
man
branched
748.682
alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1
man
branched
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
1
man
non-polymer
Hemagglutinin HA1 chain, Hemagglutinin HA2 chain
Hemagglutinin HA1 chain, Hemagglutinin HA2 chain
no
no
ADPGDTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCKLKGIAPLQLGKCNIAGWLLGNPECDLLLTASSW
SYIVETSNSENGTCYPGDFIDYEELREQLSSVSSFEKFEIFPKTSSWPNHETTKGVTAACSYAGASSFYRNLLWLTKKGS
SYPKLSKSYVNNKGKEVLVLWGVHHPPTGTDQQSLYQNADAYVSVGSSKYNRRFTPEIAARPKVRDQAGRMNYYWTLLEP
GDTITFEATGNLIAPWYAFALNRGSGSGIITSDAPVHDCNTKCQTPHGAINSSLPFQNIHPVTIGECPKYVRSTKLRMAT
GLRNIPSIQSR
ADPGDTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCKLKGIAPLQLGKCNIAGWLLGNPECDLLLTASSW
SYIVETSNSENGTCYPGDFIDYEELREQLSSVSSFEKFEIFPKTSSWPNHETTKGVTAACSYAGASSFYRNLLWLTKKGS
SYPKLSKSYVNNKGKEVLVLWGVHHPPTGTDQQSLYQNADAYVSVGSSKYNRRFTPEIAARPKVRDQAGRMNYYWTLLEP
GDTITFEATGNLIAPWYAFALNRGSGSGIITSDAPVHDCNTKCQTPHGAINSSLPFQNIHPVTIGECPKYVRSTKLRMAT
GLRNIPSIQSR
A
polypeptide(L)
no
no
GLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNNLERRIENL
NKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVRNLYEKVKSQLKNNAKEIGNGCFEFYHKCDDACMESVRNGTYDYP
KYSEESKLNREEIDGVSGR
GLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNNLERRIENL
NKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVRNLYEKVKSQLKNNAKEIGNGCFEFYHKCDDACMESVRNGTYDYP
KYSEESKLNREEIDGVSGR
B
polypeptide(L)
no
no
EVQLVESGPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSK
SQVVLTMTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYF
PEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
EVQLVESGPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSK
SQVVLTMTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYF
PEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
H
polypeptide(L)
no
no
QPVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVSWYQQVPGTAPKLLIYGNNERPSGVPDRFSGSKSATSASLAISGLQ
SEDEADYYCAAWDDSLNGFWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPV
KAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS
QPVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVSWYQQVPGTAPKLLIYGNNERPSGVPDRFSGSKSATSASLAISGLQ
SEDEADYYCAAWDDSLNGFWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPV
KAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS
L
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
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n
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n
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n
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n
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n
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n
n
n
n
n
n
n
n
n
n
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n
n
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n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Influenza A virus
A/South Carolina/1/1918(H1N1)
sample
HA, Hemagglutinin
59375
Influenza A virus
7111
Trichoplusia ni
BTI-TN-5B1-4
Autographa californica nucleopolyhedrovirus
Influenza A virus
A/South Carolina/1/1918(H1N1)
sample
HA, Hemagglutinin
59375
Influenza A virus
7111
Trichoplusia ni
BTI-TN-5B1-4
Autographa californica nucleopolyhedrovirus
human
sample
Immunoglobulin, Gamma Chain
9606
Homo sapiens
HEK 293F
9606
kidney
Homo sapiens
Plasmid
pEE6.4
human
sample
Immunoglobulin, Lambda Chain
9606
Homo sapiens
HEK 293F
9606
kidney
Homo sapiens
Plasmid
pEE12.4
1
5.19
76.31
VAPOR DIFFUSION, SITTING DROP
6.7
16% PEG1000, 100mM PIPES pH 6.7, VAPOR DIFFUSION, SITTING DROP, temperature 277K
277
atom_site
chem_comp
entity
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
pdbx_validate_close_contact
struct_asym
struct_conn
struct_ref_seq_dif
struct_site
struct_site_gen
repository
Initial release
Carbohydrate remediation
repository
Remediation
Advisory
Version format compliance
Advisory
Atomic model
Data collection
Database references
Derived calculations
Structure summary
1
0
2010-04-07
1
1
2011-07-13
2
0
2020-07-29
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.type_symbol
_chem_comp.name
_chem_comp.type
_entity.formula_weight
_entity.pdbx_description
_entity.pdbx_number_of_molecules
_entity.type
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_validate_close_contact.auth_asym_id_2
_pdbx_validate_close_contact.auth_seq_id_2
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_role
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_ref_seq_dif.details
A
NAG
501
n
C
NAG
1
A
NAG
502
n
C
NAG
2
A
NAG
601
n
D
NAG
1
A
NAG
602
n
D
NAG
2
A
BMA
603
n
D
BMA
3
A
MAN
604
n
D
MAN
4
A
NAG
701
n
E
NAG
1
A
NAG
702
n
E
NAG
2
DManpb
b-D-mannopyranose
b-D-Manp
Man
DManpa
a-D-mannopyranose
a-D-Manp
Man
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
Crystal structure of a 2009 H1N1 influenza virus hemagglutinin
RCSB
Y
RCSB
2010-03-01
REL
REL
oligosaccharide
oligosaccharide
DGlcpNAcb1-4DGlcpNAcb1-
5
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1
5
PDB2Glycan
1.1.0
WURCS
[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}
5
PDB-CARE
LINUCS
DManpa1-3DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-
6
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/3,4,3/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3/a4-b1_b4-c1_c3-d1
6
PDB2Glycan
1.1.0
WURCS
[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}}}}}
6
PDB-CARE
LINUCS
C1
O4
NAG
NAG
2
1
5
O1
HO4
sing
C1
O4
NAG
NAG
2
1
6
O1
HO4
sing
C1
O4
BMA
NAG
3
2
6
O1
HO4
sing
C1
O3
MAN
BMA
4
3
6
O1
HO3
sing
n
n
n
n
n
n
NAG
2-acetamido-2-deoxy-beta-D-glucopyranose
NAG
401
7
NAG
NAG
401
A
n
1
7
A
n
2
8
A
n
3
9
A
n
4
10
A
ASP
11
n
5
ASP
11
A
THR
12
n
6
THR
12
A
ILE
13
n
7
ILE
13
A
CYS
14
n
8
CYS
14
A
ILE
15
n
9
ILE
15
A
GLY
16
n
10
GLY
16
A
TYR
17
n
11
TYR
17
A
HIS
18
n
12
HIS
18
A
ALA
19
n
13
ALA
19
A
ASN
20
n
14
ASN
20
A
ASN
21
n
15
ASN
21
A
SER
22
n
16
SER
22
A
THR
23
n
17
THR
23
A
ASP
24
n
18
ASP
24
A
THR
25
n
19
THR
25
A
VAL
26
n
20
VAL
26
A
ASP
27
n
21
ASP
27
A
THR
28
n
22
THR
28
A
VAL
29
n
23
VAL
29
A
LEU
30
n
24
LEU
30
A
GLU
31
n
25
GLU
31
A
LYS
32
n
26
LYS
32
A
ASN
33
n
27
ASN
33
A
VAL
34
n
28
VAL
34
A
THR
35
n
29
THR
35
A
VAL
36
n
30
VAL
36
A
THR
37
n
31
THR
37
A
HIS
38
n
32
HIS
38
A
SER
39
n
33
SER
39
A
VAL
40
n
34
VAL
40
A
ASN
41
n
35
ASN
41
A
LEU
42
n
36
LEU
42
A
LEU
43
n
37
LEU
43
A
GLU
44
n
38
GLU
44
A
ASP
45
n
39
ASP
45
A
SER
46
n
40
SER
46
A
HIS
47
n
41
HIS
47
A
ASN
48
n
42
ASN
48
A
GLY
49
n
43
GLY
49
A
LYS
50
n
44
LYS
50
A
LEU
51
n
45
LEU
51
A
CYS
52
n
46
CYS
52
A
LYS
53
n
47
LYS
53
A
LEU
54
n
48
LEU
54
A
LYS
54
n
49
A
LYS
54
A
GLY
55
n
50
GLY
55
A
ILE
56
n
51
ILE
56
A
ALA
57
n
52
ALA
57
A
PRO
58
n
53
PRO
58
A
LEU
59
n
54
LEU
59
A
GLN
60
n
55
GLN
60
A
LEU
61
n
56
LEU
61
A
GLY
62
n
57
GLY
62
A
LYS
63
n
58
LYS
63
A
CYS
64
n
59
CYS
64
A
ASN
65
n
60
ASN
65
A
ILE
66
n
61
ILE
66
A
ALA
67
n
62
ALA
67
A
GLY
68
n
63
GLY
68
A
TRP
69
n
64
TRP
69
A
LEU
70
n
65
LEU
70
A
LEU
71
n
66
LEU
71
A
GLY
72
n
67
GLY
72
A
ASN
73
n
68
ASN
73
A
PRO
74
n
69
PRO
74
A
GLU
75
n
70
GLU
75
A
CYS
76
n
71
CYS
76
A
ASP
77
n
72
ASP
77
A
LEU
78
n
73
LEU
78
A
LEU
79
n
74
LEU
79
A
LEU
80
n
75
LEU
80
A
THR
81
n
76
THR
81
A
ALA
82
n
77
ALA
82
A
SER
83
n
78
SER
83
A
SER
83
n
79
A
SER
83
A
TRP
84
n
80
TRP
84
A
SER
85
n
81
SER
85
A
TYR
86
n
82
TYR
86
A
ILE
87
n
83
ILE
87
A
VAL
88
n
84
VAL
88
A
GLU
89
n
85
GLU
89
A
THR
90
n
86
THR
90
A
SER
91
n
87
SER
91
A
ASN
92
n
88
ASN
92
A
SER
93
n
89
SER
93
A
GLU
94
n
90
GLU
94
A
ASN
95
n
91
ASN
95
A
GLY
95
n
92
A
GLY
95
A
THR
96
n
93
THR
96
A
CYS
97
n
94
CYS
97
A
TYR
98
n
95
TYR
98
A
PRO
99
n
96
PRO
99
A
GLY
100
n
97
GLY
100
A
ASP
101
n
98
ASP
101
A
PHE
102
n
99
PHE
102
A
ILE
103
n
100
ILE
103
A
ASP
104
n
101
ASP
104
A
TYR
105
n
102
TYR
105
A
GLU
106
n
103
GLU
106
A
GLU
107
n
104
GLU
107
A
LEU
108
n
105
LEU
108
A
ARG
109
n
106
ARG
109
A
GLU
110
n
107
GLU
110
A
GLN
111
n
108
GLN
111
A
LEU
112
n
109
LEU
112
A
SER
113
n
110
SER
113
A
SER
114
n
111
SER
114
A
VAL
115
n
112
VAL
115
A
SER
116
n
113
SER
116
A
SER
117
n
114
SER
117
A
PHE
118
n
115
PHE
118
A
GLU
119
n
116
GLU
119
A
LYS
120
n
117
LYS
120
A
PHE
121
n
118
PHE
121
A
GLU
122
n
119
GLU
122
A
ILE
123
n
120
ILE
123
A
PHE
124
n
121
PHE
124
A
PRO
125
n
122
PRO
125
A
LYS
125
n
123
A
LYS
125
A
THR
125
n
124
B
THR
125
A
SER
125
n
125
C
SER
125
A
SER
126
n
126
SER
126
A
TRP
127
n
127
TRP
127
A
PRO
128
n
128
PRO
128
A
ASN
129
n
129
ASN
129
A
HIS
130
n
130
HIS
130
A
GLU
131
n
131
GLU
131
A
THR
132
n
132
THR
132
A
THR
133
n
133
THR
133
A
LYS
133
n
134
A
LYS
133
A
GLY
134
n
135
GLY
134
A
VAL
135
n
136
VAL
135
A
THR
136
n
137
THR
136
A
ALA
137
n
138
ALA
137
A
ALA
138
n
139
ALA
138
A
CYS
139
n
140
CYS
139
A
SER
140
n
141
SER
140
A
TYR
141
n
142
TYR
141
A
ALA
142
n
143
ALA
142
A
GLY
143
n
144
GLY
143
A
ALA
144
n
145
ALA
144
A
SER
145
n
146
SER
145
A
SER
146
n
147
SER
146
A
PHE
147
n
148
PHE
147
A
TYR
148
n
149
TYR
148
A
ARG
149
n
150
ARG
149
A
ASN
150
n
151
ASN
150
A
LEU
151
n
152
LEU
151
A
LEU
152
n
153
LEU
152
A
TRP
153
n
154
TRP
153
A
LEU
154
n
155
LEU
154
A
THR
155
n
156
THR
155
A
LYS
156
n
157
LYS
156
A
LYS
157
n
158
LYS
157
A
GLY
158
n
159
GLY
158
A
SER
159
n
160
SER
159
A
SER
160
n
161
SER
160
A
TYR
161
n
162
TYR
161
A
PRO
162
n
163
PRO
162
A
LYS
163
n
164
LYS
163
A
LEU
164
n
165
LEU
164
A
SER
165
n
166
SER
165
A
LYS
166
n
167
LYS
166
A
SER
167
n
168
SER
167
A
TYR
168
n
169
TYR
168
A
VAL
169
n
170
VAL
169
A
ASN
170
n
171
ASN
170
A
ASN
171
n
172
ASN
171
A
LYS
172
n
173
LYS
172
A
GLY
173
n
174
GLY
173
A
LYS
174
n
175
LYS
174
A
GLU
175
n
176
GLU
175
A
VAL
176
n
177
VAL
176
A
LEU
177
n
178
LEU
177
A
VAL
178
n
179
VAL
178
A
LEU
179
n
180
LEU
179
A
TRP
180
n
181
TRP
180
A
GLY
181
n
182
GLY
181
A
VAL
182
n
183
VAL
182
A
HIS
183
n
184
HIS
183
A
HIS
184
n
185
HIS
184
A
PRO
185
n
186
PRO
185
A
PRO
186
n
187
PRO
186
A
THR
187
n
188
THR
187
A
GLY
188
n
189
GLY
188
A
THR
189
n
190
THR
189
A
ASP
190
n
191
ASP
190
A
GLN
191
n
192
GLN
191
A
GLN
192
n
193
GLN
192
A
SER
193
n
194
SER
193
A
LEU
194
n
195
LEU
194
A
TYR
195
n
196
TYR
195
A
GLN
196
n
197
GLN
196
A
ASN
197
n
198
ASN
197
A
ALA
198
n
199
ALA
198
A
ASP
199
n
200
ASP
199
A
ALA
200
n
201
ALA
200
A
TYR
201
n
202
TYR
201
A
VAL
202
n
203
VAL
202
A
SER
203
n
204
SER
203
A
VAL
204
n
205
VAL
204
A
GLY
205
n
206
GLY
205
A
SER
206
n
207
SER
206
A
SER
207
n
208
SER
207
A
LYS
208
n
209
LYS
208
A
TYR
209
n
210
TYR
209
A
ASN
210
n
211
ASN
210
A
ARG
211
n
212
ARG
211
A
ARG
212
n
213
ARG
212
A
PHE
213
n
214
PHE
213
A
THR
214
n
215
THR
214
A
PRO
215
n
216
PRO
215
A
GLU
216
n
217
GLU
216
A
ILE
217
n
218
ILE
217
A
ALA
218
n
219
ALA
218
A
ALA
219
n
220
ALA
219
A
ARG
220
n
221
ARG
220
A
PRO
221
n
222
PRO
221
A
LYS
222
n
223
LYS
222
A
VAL
223
n
224
VAL
223
A
ARG
224
n
225
ARG
224
A
ASP
225
n
226
ASP
225
A
GLN
226
n
227
GLN
226
A
ALA
227
n
228
ALA
227
A
GLY
228
n
229
GLY
228
A
ARG
229
n
230
ARG
229
A
MET
230
n
231
MET
230
A
ASN
231
n
232
ASN
231
A
TYR
232
n
233
TYR
232
A
TYR
233
n
234
TYR
233
A
TRP
234
n
235
TRP
234
A
THR
235
n
236
THR
235
A
LEU
236
n
237
LEU
236
A
LEU
237
n
238
LEU
237
A
GLU
238
n
239
GLU
238
A
PRO
239
n
240
PRO
239
A
GLY
240
n
241
GLY
240
A
ASP
241
n
242
ASP
241
A
THR
242
n
243
THR
242
A
ILE
243
n
244
ILE
243
A
THR
244
n
245
THR
244
A
PHE
245
n
246
PHE
245
A
GLU
246
n
247
GLU
246
A
ALA
247
n
248
ALA
247
A
THR
248
n
249
THR
248
A
GLY
249
n
250
GLY
249
A
ASN
250
n
251
ASN
250
A
LEU
251
n
252
LEU
251
A
ILE
252
n
253
ILE
252
A
ALA
253
n
254
ALA
253
A
PRO
254
n
255
PRO
254
A
TRP
255
n
256
TRP
255
A
TYR
256
n
257
TYR
256
A
ALA
257
n
258
ALA
257
A
PHE
258
n
259
PHE
258
A
ALA
259
n
260
ALA
259
A
LEU
260
n
261
LEU
260
A
ASN
261
n
262
ASN
261
A
ARG
262
n
263
ARG
262
A
GLY
263
n
264
GLY
263
A
SER
264
n
265
SER
264
A
GLY
264
n
266
A
GLY
264
A
SER
265
n
267
SER
265
A
GLY
266
n
268
GLY
266
A
ILE
267
n
269
ILE
267
A
ILE
268
n
270
ILE
268
A
THR
269
n
271
THR
269
A
SER
270
n
272
SER
270
A
ASP
271
n
273
ASP
271
A
ALA
272
n
274
ALA
272
A
PRO
273
n
275
PRO
273
A
VAL
274
n
276
VAL
274
A
HIS
275
n
277
HIS
275
A
ASP
276
n
278
ASP
276
A
CYS
277
n
279
CYS
277
A
ASN
278
n
280
ASN
278
A
THR
279
n
281
THR
279
A
LYS
280
n
282
LYS
280
A
CYS
281
n
283
CYS
281
A
GLN
282
n
284
GLN
282
A
THR
283
n
285
THR
283
A
PRO
284
n
286
PRO
284
A
HIS
285
n
287
HIS
285
A
GLY
286
n
288
GLY
286
A
ALA
287
n
289
ALA
287
A
ILE
288
n
290
ILE
288
A
ASN
289
n
291
ASN
289
A
SER
290
n
292
SER
290
A
SER
291
n
293
SER
291
A
LEU
292
n
294
LEU
292
A
PRO
293
n
295
PRO
293
A
PHE
294
n
296
PHE
294
A
GLN
295
n
297
GLN
295
A
ASN
296
n
298
ASN
296
A
ILE
297
n
299
ILE
297
A
HIS
298
n
300
HIS
298
A
PRO
299
n
301
PRO
299
A
VAL
300
n
302
VAL
300
A
THR
301
n
303
THR
301
A
ILE
302
n
304
ILE
302
A
GLY
303
n
305
GLY
303
A
GLU
304
n
306
GLU
304
A
CYS
305
n
307
CYS
305
A
PRO
306
n
308
PRO
306
A
LYS
307
n
309
LYS
307
A
TYR
308
n
310
TYR
308
A
VAL
309
n
311
VAL
309
A
ARG
310
n
312
ARG
310
A
SER
311
n
313
SER
311
A
THR
312
n
314
THR
312
A
LYS
313
n
315
LYS
313
A
LEU
314
n
316
LEU
314
A
ARG
315
n
317
ARG
315
A
MET
316
n
318
MET
316
A
ALA
317
n
319
ALA
317
A
THR
318
n
320
THR
318
A
GLY
319
n
321
GLY
319
A
LEU
320
n
322
LEU
320
A
ARG
321
n
323
ARG
321
A
ASN
322
n
324
ASN
322
A
ILE
323
n
325
ILE
323
A
PRO
324
n
326
PRO
324
A
SER
325
n
327
SER
325
A
n
328
326
A
n
329
327
A
n
330
328
A
n
331
329
A
GLY
1
n
1
GLY
1
B
LEU
2
n
2
LEU
2
B
PHE
3
n
3
PHE
3
B
GLY
4
n
4
GLY
4
B
ALA
5
n
5
ALA
5
B
ILE
6
n
6
ILE
6
B
ALA
7
n
7
ALA
7
B
GLY
8
n
8
GLY
8
B
PHE
9
n
9
PHE
9
B
ILE
10
n
10
ILE
10
B
GLU
11
n
11
GLU
11
B
GLY
12
n
12
GLY
12
B
GLY
13
n
13
GLY
13
B
TRP
14
n
14
TRP
14
B
THR
15
n
15
THR
15
B
GLY
16
n
16
GLY
16
B
MET
17
n
17
MET
17
B
ILE
18
n
18
ILE
18
B
ASP
19
n
19
ASP
19
B
GLY
20
n
20
GLY
20
B
TRP
21
n
21
TRP
21
B
TYR
22
n
22
TYR
22
B
GLY
23
n
23
GLY
23
B
TYR
24
n
24
TYR
24
B
HIS
25
n
25
HIS
25
B
HIS
26
n
26
HIS
26
B
GLN
27
n
27
GLN
27
B
ASN
28
n
28
ASN
28
B
GLU
29
n
29
GLU
29
B
GLN
30
n
30
GLN
30
B
GLY
31
n
31
GLY
31
B
SER
32
n
32
SER
32
B
GLY
33
n
33
GLY
33
B
TYR
34
n
34
TYR
34
B
ALA
35
n
35
ALA
35
B
ALA
36
n
36
ALA
36
B
ASP
37
n
37
ASP
37
B
GLN
38
n
38
GLN
38
B
LYS
39
n
39
LYS
39
B
SER
40
n
40
SER
40
B
THR
41
n
41
THR
41
B
GLN
42
n
42
GLN
42
B
ASN
43
n
43
ASN
43
B
ALA
44
n
44
ALA
44
B
ILE
45
n
45
ILE
45
B
ASP
46
n
46
ASP
46
B
GLY
47
n
47
GLY
47
B
ILE
48
n
48
ILE
48
B
THR
49
n
49
THR
49
B
ASN
50
n
50
ASN
50
B
LYS
51
n
51
LYS
51
B
VAL
52
n
52
VAL
52
B
ASN
53
n
53
ASN
53
B
SER
54
n
54
SER
54
B
VAL
55
n
55
VAL
55
B
ILE
56
n
56
ILE
56
B
GLU
57
n
57
GLU
57
B
LYS
58
n
58
LYS
58
B
MET
59
n
59
MET
59
B
ASN
60
n
60
ASN
60
B
THR
61
n
61
THR
61
B
GLN
62
n
62
GLN
62
B
PHE
63
n
63
PHE
63
B
THR
64
n
64
THR
64
B
ALA
65
n
65
ALA
65
B
VAL
66
n
66
VAL
66
B
GLY
67
n
67
GLY
67
B
LYS
68
n
68
LYS
68
B
GLU
69
n
69
GLU
69
B
PHE
70
n
70
PHE
70
B
ASN
71
n
71
ASN
71
B
ASN
72
n
72
ASN
72
B
LEU
73
n
73
LEU
73
B
GLU
74
n
74
GLU
74
B
ARG
75
n
75
ARG
75
B
ARG
76
n
76
ARG
76
B
ILE
77
n
77
ILE
77
B
GLU
78
n
78
GLU
78
B
ASN
79
n
79
ASN
79
B
LEU
80
n
80
LEU
80
B
ASN
81
n
81
ASN
81
B
LYS
82
n
82
LYS
82
B
LYS
83
n
83
LYS
83
B
VAL
84
n
84
VAL
84
B
ASP
85
n
85
ASP
85
B
ASP
86
n
86
ASP
86
B
GLY
87
n
87
GLY
87
B
PHE
88
n
88
PHE
88
B
LEU
89
n
89
LEU
89
B
ASP
90
n
90
ASP
90
B
ILE
91
n
91
ILE
91
B
TRP
92
n
92
TRP
92
B
THR
93
n
93
THR
93
B
TYR
94
n
94
TYR
94
B
ASN
95
n
95
ASN
95
B
ALA
96
n
96
ALA
96
B
GLU
97
n
97
GLU
97
B
LEU
98
n
98
LEU
98
B
LEU
99
n
99
LEU
99
B
VAL
100
n
100
VAL
100
B
LEU
101
n
101
LEU
101
B
LEU
102
n
102
LEU
102
B
GLU
103
n
103
GLU
103
B
ASN
104
n
104
ASN
104
B
GLU
105
n
105
GLU
105
B
ARG
106
n
106
ARG
106
B
THR
107
n
107
THR
107
B
LEU
108
n
108
LEU
108
B
ASP
109
n
109
ASP
109
B
PHE
110
n
110
PHE
110
B
HIS
111
n
111
HIS
111
B
ASP
112
n
112
ASP
112
B
SER
113
n
113
SER
113
B
ASN
114
n
114
ASN
114
B
VAL
115
n
115
VAL
115
B
ARG
116
n
116
ARG
116
B
ASN
117
n
117
ASN
117
B
LEU
118
n
118
LEU
118
B
TYR
119
n
119
TYR
119
B
GLU
120
n
120
GLU
120
B
LYS
121
n
121
LYS
121
B
VAL
122
n
122
VAL
122
B
LYS
123
n
123
LYS
123
B
SER
124
n
124
SER
124
B
GLN
125
n
125
GLN
125
B
LEU
126
n
126
LEU
126
B
LYS
127
n
127
LYS
127
B
ASN
128
n
128
ASN
128
B
ASN
129
n
129
ASN
129
B
ALA
130
n
130
ALA
130
B
LYS
131
n
131
LYS
131
B
GLU
132
n
132
GLU
132
B
ILE
133
n
133
ILE
133
B
GLY
134
n
134
GLY
134
B
ASN
135
n
135
ASN
135
B
GLY
136
n
136
GLY
136
B
CYS
137
n
137
CYS
137
B
PHE
138
n
138
PHE
138
B
GLU
139
n
139
GLU
139
B
PHE
140
n
140
PHE
140
B
TYR
141
n
141
TYR
141
B
HIS
142
n
142
HIS
142
B
LYS
143
n
143
LYS
143
B
CYS
144
n
144
CYS
144
B
ASP
145
n
145
ASP
145
B
ASP
146
n
146
ASP
146
B
ALA
147
n
147
ALA
147
B
CYS
148
n
148
CYS
148
B
MET
149
n
149
MET
149
B
GLU
150
n
150
GLU
150
B
SER
151
n
151
SER
151
B
VAL
152
n
152
VAL
152
B
ARG
153
n
153
ARG
153
B
ASN
154
n
154
ASN
154
B
GLY
155
n
155
GLY
155
B
THR
156
n
156
THR
156
B
TYR
157
n
157
TYR
157
B
ASP
158
n
158
ASP
158
B
TYR
159
n
159
TYR
159
B
PRO
160
n
160
PRO
160
B
LYS
161
n
161
LYS
161
B
TYR
162
n
162
TYR
162
B
SER
163
n
163
SER
163
B
GLU
164
n
164
GLU
164
B
GLU
165
n
165
GLU
165
B
SER
166
n
166
SER
166
B
LYS
167
n
167
LYS
167
B
LEU
168
n
168
LEU
168
B
ASN
169
n
169
ASN
169
B
ARG
170
n
170
ARG
170
B
GLU
171
n
171
GLU
171
B
GLU
172
n
172
GLU
172
B
ILE
173
n
173
ILE
173
B
n
174
174
B
n
175
175
B
n
176
176
B
n
177
177
B
n
178
178
B
n
179
179
B
n
1
1
H
VAL
2
n
2
VAL
2
H
GLN
3
n
3
GLN
3
H
LEU
4
n
4
LEU
4
H
VAL
5
n
5
VAL
5
H
GLU
6
n
6
GLU
6
H
SER
7
n
7
SER
7
H
GLY
8
n
8
GLY
8
H
PRO
9
n
9
PRO
9
H
ALA
10
n
10
ALA
10
H
LEU
11
n
11
LEU
11
H
VAL
12
n
12
VAL
12
H
LYS
13
n
13
LYS
13
H
PRO
14
n
14
PRO
14
H
THR
15
n
15
THR
15
H
GLN
16
n
16
GLN
16
H
THR
17
n
17
THR
17
H
LEU
18
n
18
LEU
18
H
THR
19
n
19
THR
19
H
LEU
20
n
20
LEU
20
H
THR
21
n
21
THR
21
H
CYS
22
n
22
CYS
22
H
SER
23
n
23
SER
23
H
PHE
24
n
24
PHE
24
H
SER
25
n
25
SER
25
H
GLY
26
n
26
GLY
26
H
PHE
27
n
27
PHE
27
H
SER
28
n
28
SER
28
H
LEU
29
n
29
LEU
29
H
SER
30
n
30
SER
30
H
THR
31
n
31
THR
31
H
SER
32
n
32
SER
32
H
GLY
33
n
33
GLY
33
H
MET
34
n
34
MET
34
H
SER
35
n
35
SER
35
H
VAL
35
n
36
A
VAL
35
H
SER
35
n
37
B
SER
35
H
TRP
36
n
38
TRP
36
H
ILE
37
n
39
ILE
37
H
ARG
38
n
40
ARG
38
H
GLN
39
n
41
GLN
39
H
PRO
40
n
42
PRO
40
H
PRO
41
n
43
PRO
41
H
GLY
42
n
44
GLY
42
H
LYS
43
n
45
LYS
43
H
ALA
44
n
46
ALA
44
H
LEU
45
n
47
LEU
45
H
GLU
46
n
48
GLU
46
H
TRP
47
n
49
TRP
47
H
LEU
48
n
50
LEU
48
H
ALA
49
n
51
ALA
49
H
LEU
50
n
52
LEU
50
H
ILE
51
n
53
ILE
51
H
ASP
52
n
54
ASP
52
H
TRP
52
n
55
A
TRP
52
H
ASP
53
n
56
ASP
53
H
ASP
54
n
57
ASP
54
H
ASP
55
n
58
ASP
55
H
THR
56
n
59
THR
56
H
TYR
57
n
60
TYR
57
H
TYR
58
n
61
TYR
58
H
ILE
59
n
62
ILE
59
H
THR
60
n
63
THR
60
H
TYR
61
n
64
TYR
61
H
SER
62
n
65
SER
62
H
SER
62
n
66
A
SER
62
H
SER
62
n
67
B
SER
62
H
LEU
63
n
68
LEU
63
H
LYS
64
n
69
LYS
64
H
THR
65
n
70
THR
65
H
ARG
66
n
71
ARG
66
H
LEU
67
n
72
LEU
67
H
THR
68
n
73
THR
68
H
ILE
69
n
74
ILE
69
H
SER
70
n
75
SER
70
H
LYS
71
n
76
LYS
71
H
ASP
72
n
77
ASP
72
H
THR
73
n
78
THR
73
H
SER
74
n
79
SER
74
H
LYS
75
n
80
LYS
75
H
SER
76
n
81
SER
76
H
GLN
77
n
82
GLN
77
H
VAL
78
n
83
VAL
78
H
VAL
79
n
84
VAL
79
H
LEU
80
n
85
LEU
80
H
THR
81
n
86
THR
81
H
MET
82
n
87
MET
82
H
THR
82
n
88
A
THR
82
H
ASN
82
n
89
B
ASN
82
H
MET
82
n
90
C
MET
82
H
ASP
83
n
91
ASP
83
H
PRO
84
n
92
PRO
84
H
VAL
85
n
93
VAL
85
H
ASP
86
n
94
ASP
86
H
THR
87
n
95
THR
87
H
ALA
88
n
96
ALA
88
H
THR
89
n
97
THR
89
H
TYR
90
n
98
TYR
90
H
TYR
91
n
99
TYR
91
H
CYS
92
n
100
CYS
92
H
ALA
93
n
101
ALA
93
H
ARG
94
n
102
ARG
94
H
THR
95
n
103
THR
95
H
LEU
96
n
104
LEU
96
H
ARG
97
n
105
ARG
97
H
VAL
98
n
106
VAL
98
H
SER
99
n
107
SER
99
H
GLY
100
n
108
GLY
100
H
ASP
100
n
109
A
ASP
100
H
TYR
100
n
110
B
TYR
100
H
VAL
100
n
111
C
VAL
100
H
ARG
100
n
112
D
ARG
100
H
ASP
100
n
113
E
ASP
100
H
PHE
100
n
114
F
PHE
100
H
ASP
101
n
115
ASP
101
H
LEU
102
n
116
LEU
102
H
TRP
103
n
117
TRP
103
H
GLY
104
n
118
GLY
104
H
ARG
105
n
119
ARG
105
H
GLY
106
n
120
GLY
106
H
THR
107
n
121
THR
107
H
LEU
108
n
122
LEU
108
H
VAL
109
n
123
VAL
109
H
THR
110
n
124
THR
110
H
VAL
111
n
125
VAL
111
H
SER
112
n
126
SER
112
H
SER
113
n
127
SER
113
H
ALA
114
n
128
ALA
114
H
SER
115
n
129
SER
115
H
THR
116
n
130
THR
116
H
LYS
117
n
131
LYS
117
H
GLY
118
n
132
GLY
118
H
PRO
119
n
133
PRO
119
H
SER
120
n
134
SER
120
H
VAL
121
n
135
VAL
121
H
PHE
122
n
136
PHE
122
H
PRO
123
n
137
PRO
123
H
LEU
124
n
138
LEU
124
H
ALA
125
n
139
ALA
125
H
PRO
126
n
140
PRO
126
H
n
141
129
H
n
142
130
H
n
143
131
H
n
144
132
H
n
145
133
H
n
146
134
H
n
147
135
H
n
148
136
H
THR
137
n
149
THR
137
H
ALA
138
n
150
ALA
138
H
ALA
139
n
151
ALA
139
H
LEU
140
n
152
LEU
140
H
GLY
141
n
153
GLY
141
H
CYS
142
n
154
CYS
142
H
LEU
143
n
155
LEU
143
H
VAL
144
n
156
VAL
144
H
LYS
145
n
157
LYS
145
H
ASP
146
n
158
ASP
146
H
TYR
147
n
159
TYR
147
H
PHE
148
n
160
PHE
148
H
PRO
149
n
161
PRO
149
H
GLU
150
n
162
GLU
150
H
PRO
151
n
163
PRO
151
H
VAL
152
n
164
VAL
152
H
THR
153
n
165
THR
153
H
VAL
154
n
166
VAL
154
H
SER
156
n
167
SER
156
H
TRP
157
n
168
TRP
157
H
ASN
162
n
169
ASN
162
H
SER
163
n
170
SER
163
H
GLY
164
n
171
GLY
164
H
ALA
165
n
172
ALA
165
H
LEU
166
n
173
LEU
166
H
THR
167
n
174
THR
167
H
SER
168
n
175
SER
168
H
GLY
169
n
176
GLY
169
H
VAL
171
n
177
VAL
171
H
HIS
172
n
178
HIS
172
H
THR
173
n
179
THR
173
H
PHE
174
n
180
PHE
174
H
PRO
175
n
181
PRO
175
H
ALA
176
n
182
ALA
176
H
VAL
177
n
183
VAL
177
H
LEU
178
n
184
LEU
178
H
GLN
179
n
185
GLN
179
H
SER
180
n
186
SER
180
H
SER
182
n
187
SER
182
H
GLY
183
n
188
GLY
183
H
LEU
184
n
189
LEU
184
H
TYR
185
n
190
TYR
185
H
SER
186
n
191
SER
186
H
LEU
187
n
192
LEU
187
H
SER
188
n
193
SER
188
H
SER
189
n
194
SER
189
H
VAL
190
n
195
VAL
190
H
VAL
191
n
196
VAL
191
H
THR
192
n
197
THR
192
H
VAL
193
n
198
VAL
193
H
PRO
194
n
199
PRO
194
H
SER
195
n
200
SER
195
H
SER
196
n
201
SER
196
H
SER
197
n
202
SER
197
H
LEU
198
n
203
LEU
198
H
GLY
199
n
204
GLY
199
H
THR
200
n
205
THR
200
H
GLN
203
n
206
GLN
203
H
THR
205
n
207
THR
205
H
TYR
206
n
208
TYR
206
H
ILE
207
n
209
ILE
207
H
CYS
208
n
210
CYS
208
H
ASN
209
n
211
ASN
209
H
VAL
210
n
212
VAL
210
H
ASN
211
n
213
ASN
211
H
HIS
212
n
214
HIS
212
H
LYS
213
n
215
LYS
213
H
PRO
214
n
216
PRO
214
H
SER
215
n
217
SER
215
H
ASN
216
n
218
ASN
216
H
THR
217
n
219
THR
217
H
LYS
218
n
220
LYS
218
H
VAL
219
n
221
VAL
219
H
ASP
220
n
222
ASP
220
H
LYS
221
n
223
LYS
221
H
ARG
222
n
224
ARG
222
H
VAL
223
n
225
VAL
223
H
n
226
224
H
n
227
225
H
n
228
226
H
n
229
227
H
n
230
228
H
n
1
1
L
PRO
2
n
2
PRO
2
L
VAL
3
n
3
VAL
3
L
LEU
4
n
4
LEU
4
L
THR
5
n
5
THR
5
L
GLN
6
n
6
GLN
6
L
PRO
7
n
7
PRO
7
L
PRO
8
n
8
PRO
8
L
SER
9
n
9
SER
9
L
ALA
11
n
10
ALA
11
L
SER
12
n
11
SER
12
L
GLY
13
n
12
GLY
13
L
THR
14
n
13
THR
14
L
PRO
15
n
14
PRO
15
L
GLY
16
n
15
GLY
16
L
GLN
17
n
16
GLN
17
L
ARG
18
n
17
ARG
18
L
VAL
19
n
18
VAL
19
L
THR
20
n
19
THR
20
L
ILE
21
n
20
ILE
21
L
SER
22
n
21
SER
22
L
CYS
23
n
22
CYS
23
L
SER
24
n
23
SER
24
L
GLY
25
n
24
GLY
25
L
SER
26
n
25
SER
26
L
SER
27
n
26
SER
27
L
SER
27
n
27
A
SER
27
L
ASN
27
n
28
B
ASN
27
L
ILE
28
n
29
ILE
28
L
GLY
29
n
30
GLY
29
L
SER
30
n
31
SER
30
L
ASN
31
n
32
ASN
31
L
THR
32
n
33
THR
32
L
VAL
33
n
34
VAL
33
L
SER
34
n
35
SER
34
L
TRP
35
n
36
TRP
35
L
TYR
36
n
37
TYR
36
L
GLN
37
n
38
GLN
37
L
GLN
38
n
39
GLN
38
L
VAL
39
n
40
VAL
39
L
PRO
40
n
41
PRO
40
L
GLY
41
n
42
GLY
41
L
THR
42
n
43
THR
42
L
ALA
43
n
44
ALA
43
L
PRO
44
n
45
PRO
44
L
LYS
45
n
46
LYS
45
L
LEU
46
n
47
LEU
46
L
LEU
47
n
48
LEU
47
L
ILE
48
n
49
ILE
48
L
TYR
49
n
50
TYR
49
L
GLY
50
n
51
GLY
50
L
ASN
51
n
52
ASN
51
L
ASN
52
n
53
ASN
52
L
GLU
53
n
54
GLU
53
L
ARG
54
n
55
ARG
54
L
PRO
55
n
56
PRO
55
L
SER
56
n
57
SER
56
L
GLY
57
n
58
GLY
57
L
VAL
58
n
59
VAL
58
L
PRO
59
n
60
PRO
59
L
ASP
60
n
61
ASP
60
L
ARG
61
n
62
ARG
61
L
PHE
62
n
63
PHE
62
L
SER
63
n
64
SER
63
L
GLY
64
n
65
GLY
64
L
SER
65
n
66
SER
65
L
LYS
66
n
67
LYS
66
L
SER
67
n
68
SER
67
L
ALA
68
n
69
ALA
68
L
THR
69
n
70
THR
69
L
SER
70
n
71
SER
70
L
ALA
71
n
72
ALA
71
L
SER
72
n
73
SER
72
L
LEU
73
n
74
LEU
73
L
ALA
74
n
75
ALA
74
L
ILE
75
n
76
ILE
75
L
SER
76
n
77
SER
76
L
GLY
77
n
78
GLY
77
L
LEU
78
n
79
LEU
78
L
GLN
79
n
80
GLN
79
L
SER
80
n
81
SER
80
L
GLU
81
n
82
GLU
81
L
ASP
82
n
83
ASP
82
L
GLU
83
n
84
GLU
83
L
ALA
84
n
85
ALA
84
L
ASP
85
n
86
ASP
85
L
TYR
86
n
87
TYR
86
L
TYR
87
n
88
TYR
87
L
CYS
88
n
89
CYS
88
L
ALA
89
n
90
ALA
89
L
ALA
90
n
91
ALA
90
L
TRP
91
n
92
TRP
91
L
ASP
92
n
93
ASP
92
L
ASP
93
n
94
ASP
93
L
SER
94
n
95
SER
94
L
LEU
95
n
96
LEU
95
L
ASN
95
n
97
A
ASN
95
L
GLY
95
n
98
B
GLY
95
L
PHE
95
n
99
C
PHE
95
L
TRP
96
n
100
TRP
96
L
VAL
97
n
101
VAL
97
L
PHE
98
n
102
PHE
98
L
GLY
99
n
103
GLY
99
L
GLY
100
n
104
GLY
100
L
GLY
101
n
105
GLY
101
L
THR
102
n
106
THR
102
L
LYS
103
n
107
LYS
103
L
LEU
104
n
108
LEU
104
L
THR
105
n
109
THR
105
L
VAL
106
n
110
VAL
106
L
LEU
106
n
111
A
LEU
106
L
GLY
107
n
112
GLY
107
L
GLN
108
n
113
GLN
108
L
PRO
109
n
114
PRO
109
L
LYS
110
n
115
LYS
110
L
ALA
111
n
116
ALA
111
L
ALA
112
n
117
ALA
112
L
PRO
113
n
118
PRO
113
L
SER
114
n
119
SER
114
L
VAL
115
n
120
VAL
115
L
THR
116
n
121
THR
116
L
LEU
117
n
122
LEU
117
L
PHE
118
n
123
PHE
118
L
PRO
119
n
124
PRO
119
L
PRO
120
n
125
PRO
120
L
SER
121
n
126
SER
121
L
SER
122
n
127
SER
122
L
GLU
123
n
128
GLU
123
L
GLU
124
n
129
GLU
124
L
LEU
125
n
130
LEU
125
L
GLN
126
n
131
GLN
126
L
ALA
127
n
132
ALA
127
L
ASN
128
n
133
ASN
128
L
LYS
129
n
134
LYS
129
L
ALA
130
n
135
ALA
130
L
THR
131
n
136
THR
131
L
LEU
132
n
137
LEU
132
L
VAL
133
n
138
VAL
133
L
CYS
134
n
139
CYS
134
L
LEU
135
n
140
LEU
135
L
ILE
136
n
141
ILE
136
L
SER
137
n
142
SER
137
L
ASP
138
n
143
ASP
138
L
PHE
139
n
144
PHE
139
L
TYR
140
n
145
TYR
140
L
PRO
141
n
146
PRO
141
L
GLY
142
n
147
GLY
142
L
ALA
143
n
148
ALA
143
L
VAL
144
n
149
VAL
144
L
THR
145
n
150
THR
145
L
VAL
146
n
151
VAL
146
L
ALA
147
n
152
ALA
147
L
TRP
148
n
153
TRP
148
L
LYS
149
n
154
LYS
149
L
ALA
150
n
155
ALA
150
L
ASP
151
n
156
ASP
151
L
SER
152
n
157
SER
152
L
SER
153
n
158
SER
153
L
PRO
154
n
159
PRO
154
L
VAL
155
n
160
VAL
155
L
LYS
156
n
161
LYS
156
L
ALA
157
n
162
ALA
157
L
GLY
158
n
163
GLY
158
L
VAL
159
n
164
VAL
159
L
GLU
160
n
165
GLU
160
L
THR
161
n
166
THR
161
L
THR
162
n
167
THR
162
L
THR
163
n
168
THR
163
L
PRO
164
n
169
PRO
164
L
SER
165
n
170
SER
165
L
LYS
166
n
171
LYS
166
L
GLN
167
n
172
GLN
167
L
SER
168
n
173
SER
168
L
ASN
170
n
174
ASN
170
L
ASN
171
n
175
ASN
171
L
LYS
172
n
176
LYS
172
L
TYR
173
n
177
TYR
173
L
ALA
174
n
178
ALA
174
L
ALA
175
n
179
ALA
175
L
SER
176
n
180
SER
176
L
SER
177
n
181
SER
177
L
TYR
178
n
182
TYR
178
L
LEU
179
n
183
LEU
179
L
SER
180
n
184
SER
180
L
LEU
181
n
185
LEU
181
L
THR
182
n
186
THR
182
L
PRO
183
n
187
PRO
183
L
GLU
184
n
188
GLU
184
L
GLN
185
n
189
GLN
185
L
TRP
186
n
190
TRP
186
L
LYS
187
n
191
LYS
187
L
SER
188
n
192
SER
188
L
HIS
189
n
193
HIS
189
L
LYS
190
n
194
LYS
190
L
SER
191
n
195
SER
191
L
TYR
192
n
196
TYR
192
L
SER
193
n
197
SER
193
L
CYS
194
n
198
CYS
194
L
GLN
195
n
199
GLN
195
L
VAL
196
n
200
VAL
196
L
THR
197
n
201
THR
197
L
HIS
198
n
202
HIS
198
L
GLU
199
n
203
GLU
199
L
GLY
200
n
204
GLY
200
L
SER
203
n
205
SER
203
L
THR
204
n
206
THR
204
L
VAL
205
n
207
VAL
205
L
GLU
206
n
208
GLU
206
L
LYS
207
n
209
LYS
207
L
THR
208
n
210
THR
208
L
VAL
209
n
211
VAL
209
L
ALA
210
n
212
ALA
210
L
PRO
211
n
213
PRO
211
L
n
214
212
L
n
215
213
L
n
216
214
L
n
217
215
L
2.1081
0.6513
-3.3993
1.1235
-1.9137
7.1537
0.1842
-0.0762
0.0502
-0.1275
-0.3008
-0.0084
-0.3038
0.3271
0.1166
-0.4980
-0.1207
0.0344
-0.3676
0.0579
-0.2786
refined
61.0598
-41.2616
46.3841
X-RAY DIFFRACTION
2.0350
0.4252
3.0625
1.4488
0.0922
12.2389
0.0950
0.9820
0.2094
-1.1847
0.0778
0.4302
0.3235
-0.6564
-0.1729
0.5112
0.1052
-0.2647
0.5042
0.1551
-0.2967
refined
68.7448
-44.1739
-6.4675
X-RAY DIFFRACTION
6.2135
4.3923
-4.2967
6.0701
-4.8830
7.3286
1.2646
-1.9979
-0.6502
1.8344
-1.4953
-0.5280
-1.0308
1.3520
0.2307
-0.0812
-0.5540
-0.2335
0.4817
0.2715
-0.2353
refined
41.0960
-62.8934
100.1929
X-RAY DIFFRACTION
2.2718
3.2345
-1.9781
8.2461
-6.0231
9.9648
0.2035
-1.5609
-1.8410
0.3829
-1.4413
-1.7897
1.5336
1.1153
1.2377
-0.1105
-0.0982
-0.1636
0.7166
0.9970
0.7932
refined
47.7756
-79.4902
97.3284
X-RAY DIFFRACTION
A
11
A
325
X-RAY DIFFRACTION
1
B
1
B
173
X-RAY DIFFRACTION
2
H
2
H
223
X-RAY DIFFRACTION
3
L
2
L
211
X-RAY DIFFRACTION
4
author_defined_assembly
12
dodecameric
software_defined_assembly
PISA
6
hexameric
software_defined_assembly
PISA
2
dimeric
28120
-147
60120
3550
-25
19420
A
ASN
95
GLYCOSYLATION SITE
A
ASN
91
ASN
A
ASN
21
GLYCOSYLATION SITE
A
ASN
15
ASN
A
ASN
289
GLYCOSYLATION SITE
A
ASN
291
ASN
A
ASN
33
GLYCOSYLATION SITE
A
ASN
27
ASN
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_545
-y,x-y-1,z
crystal symmetry operation
80.8725000000
-140.0752789351
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
3_655
-x+y+1,-x,z
crystal symmetry operation
161.7450000000
0.0000000000
0.0000000000
B
O
GLY
31
B
O
GLY
31
B
N
ASN
28
B
N
ASN
28
B
O
GLY
23
B
O
GLY
23
A
N
GLY
16
A
N
GLY
10
A
N
ILE
13
A
N
ILE
7
B
O
PHE
138
B
O
PHE
138
B
O
GLU
139
B
O
GLU
139
B
N
LYS
131
B
N
LYS
131
A
N
ASP
24
A
N
ASP
18
A
O
VAL
36
A
O
VAL
30
A
N
VAL
40
A
N
VAL
34
A
O
MET
316
A
O
MET
318
A
N
GLU
44
A
N
GLU
38
A
O
PHE
294
A
O
PHE
296
A
N
GLN
295
A
N
GLN
297
A
O
LYS
307
A
O
LYS
309
A
N
LYS
53
A
N
LYS
47
A
O
CYS
277
A
O
CYS
279
A
N
LEU
59
A
N
LEU
54
A
O
VAL
88
A
O
VAL
84
A
N
GLU
89
A
N
GLU
85
A
O
ILE
268
A
O
ILE
270
A
N
SER
117
A
N
SER
114
A
O
ASN
261
A
O
ASN
262
A
O
PHE
258
A
O
PHE
259
A
N
LEU
177
A
N
LEU
178
A
N
VAL
176
A
N
VAL
177
A
O
LEU
237
A
O
LEU
238
A
N
TYR
141
A
N
TYR
142
A
O
ALA
144
A
O
ALA
145
A
N
TYR
168
A
N
TYR
169
A
O
ILE
243
A
O
ILE
244
A
O
GLU
246
A
O
GLU
247
A
N
SER
203
A
N
SER
204
A
N
VAL
202
A
N
VAL
203
A
O
PHE
213
A
O
PHE
214
A
O
ARG
229
A
O
ARG
230
A
N
HIS
184
A
N
HIS
185
A
N
GLY
181
A
N
GLY
182
A
O
ILE
252
A
O
ILE
253
A
O
GLY
286
A
O
GLY
288
A
N
THR
283
A
N
THR
285
A
N
GLN
282
A
N
GLN
284
A
O
ILE
302
A
O
ILE
304
H
N
VAL
5
C
N
VAL
5
H
O
SER
23
C
O
SER
23
H
N
LEU
18
C
N
LEU
18
H
O
MET
82
C
O
MET
87
H
O
THR
81
C
O
THR
86
H
N
THR
68
C
N
THR
73
H
N
VAL
12
C
N
VAL
12
H
O
THR
110
C
O
THR
124
H
O
THR
107
C
O
THR
121
H
N
TYR
90
C
N
TYR
98
H
O
THR
89
C
O
THR
97
H
N
GLN
39
C
N
GLN
41
H
N
TRP
36
C
N
TRP
38
H
O
LEU
48
C
O
LEU
50
H
N
LEU
50
C
N
LEU
52
H
O
TYR
58
C
O
TYR
61
H
N
LEU
124
C
N
LEU
138
H
O
GLY
141
C
O
GLY
153
H
N
ALA
138
C
N
ALA
150
H
O
VAL
193
C
O
VAL
198
H
O
VAL
190
C
O
VAL
195
H
N
HIS
172
C
N
HIS
178
H
N
LEU
124
C
N
LEU
138
H
O
GLY
141
C
O
GLY
153
H
N
ALA
138
C
N
ALA
150
H
O
VAL
193
C
O
VAL
198
H
O
SER
186
C
O
SER
191
H
N
VAL
177
C
N
VAL
183
H
N
SER
156
C
N
SER
167
H
O
ASN
209
C
O
ASN
211
H
N
VAL
210
C
N
VAL
212
H
O
VAL
219
C
O
VAL
221
L
N
ALA
11
D
N
ALA
10
L
O
LYS
103
D
O
LYS
107
L
O
THR
102
D
O
THR
106
L
N
TYR
86
D
N
TYR
87
L
O
ASP
85
D
O
ASP
86
L
N
GLN
38
D
N
GLN
39
L
N
GLN
37
D
N
GLN
38
L
O
LYS
45
D
O
LYS
46
L
N
ALA
11
D
N
ALA
10
L
O
LYS
103
D
O
LYS
107
L
O
THR
102
D
O
THR
106
L
N
TYR
86
D
N
TYR
87
L
N
ALA
90
D
N
ALA
91
L
O
VAL
97
D
O
VAL
101
L
N
ILE
21
D
N
ILE
20
L
O
LEU
73
D
O
LEU
74
L
O
ALA
74
D
O
ALA
75
L
N
SER
63
D
N
SER
64
L
N
THR
116
D
N
THR
121
L
O
LEU
135
D
O
LEU
140
L
N
LEU
132
D
N
LEU
137
L
O
LEU
179
D
O
LEU
183
L
O
TYR
178
D
O
TYR
182
L
N
GLU
160
D
N
GLU
165
L
N
THR
116
D
N
THR
121
L
O
LEU
135
D
O
LEU
140
L
N
LEU
132
D
N
LEU
137
L
O
LEU
179
D
O
LEU
183
L
O
ALA
174
D
O
ALA
178
L
N
SER
165
D
N
SER
170
L
O
VAL
155
D
O
VAL
160
L
N
TRP
148
D
N
TRP
153
L
N
THR
145
D
N
THR
150
L
O
THR
197
D
O
THR
201
L
N
HIS
198
D
N
HIS
202
L
O
SER
203
D
O
SER
205
1
B
CG1
ILE
173
B
CG1
ILE
173
1
Y
1
B
CG2
ILE
173
B
CG2
ILE
173
1
Y
1
B
CD1
ILE
173
B
CD1
ILE
173
1
Y
1
H
CG
PHE
27
C
CG
PHE
27
1
Y
1
H
CD1
PHE
27
C
CD1
PHE
27
1
Y
1
H
CD2
PHE
27
C
CD2
PHE
27
1
Y
1
H
CE1
PHE
27
C
CE1
PHE
27
1
Y
1
H
CE2
PHE
27
C
CE2
PHE
27
1
Y
1
H
CZ
PHE
27
C
CZ
PHE
27
1
Y
1
H
OG
SER
28
C
OG
SER
28
1
Y
1
H
CG
LEU
29
C
CG
LEU
29
1
Y
1
H
CD1
LEU
29
C
CD1
LEU
29
1
Y
1
H
CD2
LEU
29
C
CD2
LEU
29
1
Y
1
H
CG
ARG
222
C
CG
ARG
224
1
Y
1
H
CD
ARG
222
C
CD
ARG
224
1
Y
1
H
NE
ARG
222
C
NE
ARG
224
1
Y
1
H
CZ
ARG
222
C
CZ
ARG
224
1
Y
1
H
NH1
ARG
222
C
NH1
ARG
224
1
Y
1
H
NH2
ARG
222
C
NH2
ARG
224
1
Y
1
A
ALA
7
A
ALA
1
1
Y
1
A
ASP
8
A
ASP
2
1
Y
1
A
PRO
9
A
PRO
3
1
Y
1
A
GLY
10
A
GLY
4
1
Y
1
A
ILE
326
A
ILE
328
1
Y
1
A
GLN
327
A
GLN
329
1
Y
1
A
SER
328
A
SER
330
1
Y
1
A
ARG
329
A
ARG
331
1
Y
1
B
ASP
174
B
ASP
174
1
Y
1
B
GLY
175
B
GLY
175
1
Y
1
B
VAL
176
B
VAL
176
1
Y
1
B
SER
177
B
SER
177
1
Y
1
B
GLY
178
B
GLY
178
1
Y
1
B
ARG
179
B
ARG
179
1
Y
1
H
GLU
1
C
GLU
1
1
Y
1
H
SER
129
C
SER
141
1
Y
1
H
SER
130
C
SER
142
1
Y
1
H
LYS
131
C
LYS
143
1
Y
1
H
SER
132
C
SER
144
1
Y
1
H
THR
133
C
THR
145
1
Y
1
H
SER
134
C
SER
146
1
Y
1
H
GLY
135
C
GLY
147
1
Y
1
H
GLY
136
C
GLY
148
1
Y
1
H
GLU
224
C
GLU
226
1
Y
1
H
PRO
225
C
PRO
227
1
Y
1
H
LYS
226
C
LYS
228
1
Y
1
H
SER
227
C
SER
229
1
Y
1
H
CYS
228
C
CYS
230
1
Y
1
L
GLN
1
D
GLN
1
1
Y
1
L
THR
212
D
THR
214
1
Y
1
L
GLU
213
D
GLU
215
1
Y
1
L
CYS
214
D
CYS
216
1
Y
1
L
SER
215
D
SER
217
1
Y
1
A
A
O
NZ
PRO
LYS
128
157
2.01
1
A
A
ND2
C2
ASN
NAG
21
401
2.08
1
A
C
ND2
C2
ASN
NAG
33
1
2.18
1
A
A
ASP
CYS
276
277
-148.63
1
16.63
2.30
111.70
128.33
A
A
A
CD
CE
NZ
LYS
LYS
LYS
120
120
120
N
1
-9.04
0.90
118.30
109.26
H
H
H
CB
CG
OD1
ASP
ASP
ASP
101
101
101
N
1
A
A
CE
NZ
LYS
LYS
120
120
0.159
0.025
1.486
1.645
N
1
A
A
CB
SG
CYS
CYS
277
277
-0.153
0.016
1.812
1.659
N
1
A
ASN
20
-172.31
-169.26
1
A
SER
83
-143.63
-18.33
1
A
ASN
95
-65.41
98.58
1
A
CYS
139
-106.71
62.79
1
A
SER
146
-154.16
-159.68
1
A
ASN
171
-92.36
30.76
1
A
GLN
196
54.31
14.99
1
A
ASP
199
-109.89
76.14
1
A
SER
206
-106.75
-160.76
1
A
ASN
210
-165.06
59.51
1
A
ASN
250
69.66
-4.44
1
A
ILE
323
-112.22
74.11
1
B
LYS
127
49.08
-126.36
1
B
ASN
129
-55.06
-5.65
1
B
GLU
132
-68.11
93.39
1
H
THR
15
77.63
-1.16
1
H
LEU
29
-101.27
45.82
1
H
ASP
54
-130.73
-41.43
1
H
ASP
55
80.89
-5.23
1
H
SER
62
-59.40
105.53
D
1
H
ARG
100
-65.73
87.46
E
1
H
ASP
100
-70.14
-72.82
1
H
ASP
146
51.12
75.61
1
H
PRO
149
-106.35
-166.08
1
H
ASN
162
38.45
44.73
1
H
ASN
216
38.47
53.41
1
L
PRO
15
-39.07
125.38
B
1
L
ASN
27
-118.18
-86.48
1
L
SER
30
-142.97
-18.91
1
L
ASN
52
97.91
-2.93
1
L
ALA
68
59.17
-131.25
1
L
ALA
84
-167.66
-167.23
1
L
LEU
95
56.99
-133.03
1
L
SER
168
-61.22
4.64
1
L
ASN
171
70.28
-7.73
1
L
SER
191
-177.98
148.75
82.287
2.96
1.48
0.00
2.96
0.00
-4.44
0.935
0.919
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.25910
0.23010
0.23154
2.80
49.69
2596
50122
4.9
98.14
28.678
0.251
RANDOM
LIKELY RESIDUAL
1
Isotropic with TLS
THROUGHOUT
MOLECULAR REPLACEMENT
0.384
0.282
0.80
0.80
1.20
MAXIMUM LIKELIHOOD
MASK
2.80
49.69
0
7207
120
0
7087
0.016
0.022
7401
1.784
1.967
10097
6.850
5.000
921
38.645
24.801
302
17.626
15.000
1160
18.391
15.000
26
0.108
0.200
1150
0.008
0.021
5560
0.629
1.500
4597
1.219
2.000
7434
1.992
3.000
2804
3.384
4.500
2662
0.479
0.414
2.872
189
3230
20
87.46
90.4
2.80
50
3LZF
54245
53366
1.0
0.04
1
10.3
98.4
2.80
2.89
1.8
0.49
1
3.0
data collection
Blu-Ice
phasing
PHASER
refinement
REFMAC
5.4.0069
data reduction
HKL-2000
data reduction
XPREP
Hemagglutinin, HA1 Subunit, Hemagglutinin, HA2 Subunit, 2D1 Fab, Heavy Chain, 2D1 Fab, Light Chain
Crystal Structure of Fab 2D1 in Complex with the 1918 Influenza Virus Hemagglutinin
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
5
N
N
7
N
N
A
ASN
65
A
ASN
60
HELX_P
A
GLY
72
A
GLY
67
1
1
8
A
ASN
73
A
ASN
68
HELX_P
A
LEU
80
A
LEU
75
5
2
8
A
ASP
104
A
ASP
101
HELX_P
A
SER
113
A
SER
110
1
3
10
A
THR
187
A
THR
188
HELX_P
A
GLN
196
A
GLN
197
1
4
10
B
ASP
37
B
ASP
37
HELX_P
B
LYS
58
B
LYS
58
1
5
22
B
GLU
74
B
GLU
74
HELX_P
B
LYS
127
B
LYS
127
1
6
54
B
ASP
145
B
ASP
145
HELX_P
B
ARG
153
B
ARG
153
1
7
9
B
TYR
162
B
TYR
162
HELX_P
B
GLU
171
B
GLU
171
1
8
10
H
ASP
83
C
ASP
91
HELX_P
H
THR
87
C
THR
95
5
9
5
H
SER
163
C
SER
170
HELX_P
H
ALA
165
C
ALA
172
5
10
3
H
LYS
213
C
LYS
215
HELX_P
H
ASN
216
C
ASN
218
5
11
4
L
GLN
79
D
GLN
80
HELX_P
L
GLU
83
D
GLU
84
5
12
5
L
SER
121
D
SER
126
HELX_P
L
ALA
127
D
ALA
132
1
13
7
L
THR
182
D
THR
186
HELX_P
L
LYS
187
D
LYS
191
1
14
6
disulf
2.041
A
CYS
14
A
SG
CYS
8
1_555
B
CYS
137
B
SG
CYS
137
1_555
disulf
2.843
A
CYS
52
A
SG
CYS
46
1_555
A
CYS
277
A
SG
CYS
279
1_555
disulf
2.098
A
CYS
64
A
SG
CYS
59
1_555
A
CYS
76
A
SG
CYS
71
1_555
disulf
2.160
A
CYS
97
A
SG
CYS
94
1_555
A
CYS
139
A
SG
CYS
140
1_555
disulf
2.105
A
CYS
281
A
SG
CYS
283
1_555
A
CYS
305
A
SG
CYS
307
1_555
disulf
2.039
B
CYS
144
B
SG
CYS
144
1_555
B
CYS
148
B
SG
CYS
148
1_555
disulf
2.075
H
CYS
22
C
SG
CYS
22
1_555
H
CYS
92
C
SG
CYS
100
1_555
disulf
2.042
H
CYS
142
C
SG
CYS
154
1_555
H
CYS
208
C
SG
CYS
210
1_555
disulf
2.081
L
CYS
23
D
SG
CYS
22
1_555
L
CYS
88
D
SG
CYS
89
1_555
disulf
2.045
L
CYS
134
D
SG
CYS
139
1_555
L
CYS
194
D
SG
CYS
198
1_555
covale
1.452
one
N-Glycosylation
A
ASN
21
A
ND2
ASN
15
1_555
A
NAG
401
H
C1
NAG
1_555
covale
1.462
one
N-Glycosylation
A
ASN
33
A
ND2
ASN
27
1_555
C
NAG
1
E
C1
NAG
1_555
covale
1.430
one
N-Glycosylation
A
ASN
95
A
ND2
ASN
91
1_555
D
NAG
1
F
C1
NAG
1_555
covale
1.456
one
N-Glycosylation
A
ASN
289
A
ND2
ASN
291
1_555
E
NAG
1
G
C1
NAG
1_555
covale
1.448
both
C
NAG
1
E
O4
NAG
1_555
C
NAG
2
E
C1
NAG
1_555
covale
1.438
both
D
NAG
1
F
O4
NAG
1_555
D
NAG
2
F
C1
NAG
1_555
covale
1.442
both
D
NAG
2
F
O4
NAG
1_555
D
BMA
3
F
C1
BMA
1_555
covale
1.459
both
D
BMA
3
F
O3
BMA
1_555
D
MAN
4
F
C1
MAN
1_555
covale
1.463
both
E
NAG
1
G
O4
NAG
1_555
E
NAG
2
G
C1
NAG
1_555
VIRAL PROTEIN/IMMUNE SYSTEM
hemagglutinin, Fab, neutralizing antibodies, antibody, pandemic flu, swine flu, Envelope protein, Fusion protein, Glycoprotein, antigen, Virion, VIRAL PROTEIN-IMMUNE SYSTEM complex
H
PHE
148
C
PHE
160
1
H
PRO
149
C
PRO
161
-1.57
H
GLU
150
C
GLU
162
1
H
PRO
151
C
PRO
163
-12.00
L
TYR
140
D
TYR
145
1
L
PRO
141
D
PRO
146
1.69
HEMA_I18A0
UNP
1
18
Q9WFX3
DTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCKLKGIAPLQLGKCNIAGWLLGNPECDLLLTASSWSYIV
ETSNSENGTCYPGDFIDYEELREQLSSVSSFEKFEIFPKTSSWPNHETTKGVTAACSYAGASSFYRNLLWLTKKGSSYPK
LSKSYVNNKGKEVLVLWGVHHPPTGTDQQSLYQNADAYVSVGSSKYNRRFTPEIAARPKVRDQAGRMNYYWTLLEPGDTI
TFEATGNLIAPWYAFALNRGSGSGIITSDAPVHDCNTKCQTPHGAINSSLPFQNIHPVTIGECPKYVRSTKLRMATGLRN
IPSIQSR
HEMA_I18A0
UNP
2
345
Q9WFX3
GLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNNLERRIENL
NKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVRNLYEKVKSQLKNNAKEIGNGCFEFYHKCDDACMESVRNGTYDYP
KYSEESKLNREEIDGV
3LZF
PDB
3
3LZF
EVQLVESGPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSK
SQVVLTMTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYF
PEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
3LZF
PDB
4
3LZF
QPVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVSWYQQVPGTAPKLLIYGNNERPSGVPDRFSGSKSATSASLAISGLQ
SEDEADYYCAAWDDSLNGFWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPV
KAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS
18
344
3LZF
11
329
Q9WFX3
A
1
5
331
345
520
3LZF
1
176
Q9WFX3
B
2
1
176
1
228
3LZF
1
228
3LZF
H
3
1
230
1
215
3LZF
1
215
3LZF
L
4
1
217
1
expression tag
ALA
7
3LZF
A
Q9WFX3
UNP
1
1
expression tag
ASP
8
3LZF
A
Q9WFX3
UNP
2
1
expression tag
PRO
9
3LZF
A
Q9WFX3
UNP
3
1
expression tag
GLY
10
3LZF
A
Q9WFX3
UNP
4
2
expression tag
SER
177
3LZF
B
Q9WFX3
UNP
177
2
expression tag
GLY
178
3LZF
B
Q9WFX3
UNP
178
2
expression tag
ARG
179
3LZF
B
Q9WFX3
UNP
179
5
2
2
3
2
3
4
2
4
3
3
4
6
4
4
3
5
4
3
4
4
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
B
GLY
31
B
GLY
31
B
ALA
36
B
ALA
36
B
TYR
22
B
TYR
22
B
ASN
28
B
ASN
28
A
THR
12
A
THR
6
A
TYR
17
A
TYR
11
B
CYS
137
B
CYS
137
B
PHE
140
B
PHE
140
B
ALA
130
B
ALA
130
B
GLU
132
B
GLU
132
A
ASP
24
A
ASP
18
A
VAL
26
A
VAL
20
A
VAL
34
A
VAL
28
A
VAL
36
A
VAL
30
A
SER
39
A
SER
33
A
ASN
41
A
ASN
35
A
ARG
315
A
ARG
317
A
ALA
317
A
ALA
319
A
LEU
43
A
LEU
37
A
GLU
44
A
GLU
38
A
PHE
294
A
PHE
296
A
GLN
295
A
GLN
297
A
LYS
307
A
LYS
309
A
TYR
308
A
TYR
310
A
LEU
51
A
LEU
45
A
LEU
54
A
LEU
48
A
VAL
274
A
VAL
276
A
THR
279
A
THR
281
A
LEU
59
A
LEU
54
A
GLN
60
A
GLN
55
A
ILE
87
A
ILE
83
A
GLU
89
A
GLU
85
A
ILE
267
A
ILE
269
A
THR
269
A
THR
271
A
VAL
115
A
VAL
112
A
GLU
122
A
GLU
119
A
TYR
256
A
TYR
257
A
ARG
262
A
ARG
263
A
VAL
176
A
VAL
177
A
LEU
177
A
LEU
178
A
LEU
236
A
LEU
237
A
LEU
237
A
LEU
238
A
THR
136
A
THR
137
A
TYR
141
A
TYR
142
A
ALA
144
A
ALA
145
A
SER
146
A
SER
147
A
LEU
164
A
LEU
165
A
VAL
169
A
VAL
170
A
THR
242
A
THR
243
A
ALA
247
A
ALA
248
A
VAL
202
A
VAL
203
A
GLY
205
A
GLY
206
A
ASN
210
A
ASN
211
A
PHE
213
A
PHE
214
A
ARG
229
A
ARG
230
A
TYR
233
A
TYR
234
A
TRP
180
A
TRP
181
A
HIS
184
A
HIS
185
A
LEU
251
A
LEU
252
A
ILE
252
A
ILE
253
A
GLY
286
A
GLY
288
A
ALA
287
A
ALA
289
A
CYS
281
A
CYS
283
A
THR
283
A
THR
285
A
ILE
302
A
ILE
304
A
GLY
303
A
GLY
305
H
GLN
3
C
GLN
3
H
SER
7
C
SER
7
H
LEU
18
C
LEU
18
H
SER
25
C
SER
25
H
GLN
77
C
GLN
82
H
MET
82
C
MET
87
H
LEU
67
C
LEU
72
H
ASP
72
C
ASP
77
H
LEU
11
C
LEU
11
H
VAL
12
C
VAL
12
H
THR
107
C
THR
121
H
VAL
111
C
VAL
125
H
ALA
88
C
ALA
96
H
ARG
97
C
ARG
105
H
GLY
33
C
GLY
33
H
GLN
39
C
GLN
41
H
GLU
46
C
GLU
48
H
ASP
52
C
ASP
54
H
TYR
57
C
TYR
60
H
ILE
59
C
ILE
62
H
SER
120
C
SER
134
H
LEU
124
C
LEU
138
H
ALA
138
C
ALA
150
H
TYR
147
C
TYR
159
H
TYR
185
C
TYR
190
H
VAL
193
C
VAL
198
H
VAL
171
C
VAL
177
H
THR
173
C
THR
179
H
SER
120
C
SER
134
H
LEU
124
C
LEU
138
H
ALA
138
C
ALA
150
H
TYR
147
C
TYR
159
H
TYR
185
C
TYR
190
H
VAL
193
C
VAL
198
H
VAL
177
C
VAL
183
H
LEU
178
C
LEU
184
H
THR
153
C
THR
165
H
TRP
157
C
TRP
168
H
ILE
207
C
ILE
209
H
HIS
212
C
HIS
214
H
THR
217
C
THR
219
H
ARG
222
C
ARG
224
L
SER
9
D
SER
9
L
GLY
13
D
GLY
12
L
THR
102
D
THR
106
L
VAL
106
D
VAL
110
L
ASP
85
D
ASP
86
L
ASP
92
D
ASP
93
L
VAL
33
D
VAL
34
L
GLN
38
D
GLN
39
L
LYS
45
D
LYS
46
L
ILE
48
D
ILE
49
L
SER
9
D
SER
9
L
GLY
13
D
GLY
12
L
THR
102
D
THR
106
L
VAL
106
D
VAL
110
L
ASP
85
D
ASP
86
L
ASP
92
D
ASP
93
L
PHE
95
D
PHE
99
L
PHE
98
D
PHE
102
C
L
VAL
19
D
VAL
18
L
SER
24
D
SER
23
L
SER
70
D
SER
71
L
ILE
75
D
ILE
76
L
PHE
62
D
PHE
63
L
SER
67
D
SER
68
L
SER
114
D
SER
119
L
PHE
118
D
PHE
123
L
ALA
130
D
ALA
135
L
PHE
139
D
PHE
144
L
TYR
173
D
TYR
177
L
LEU
181
D
LEU
185
L
VAL
159
D
VAL
164
L
THR
161
D
THR
166
L
SER
114
D
SER
119
L
PHE
118
D
PHE
123
L
ALA
130
D
ALA
135
L
PHE
139
D
PHE
144
L
TYR
173
D
TYR
177
L
LEU
181
D
LEU
185
L
SER
165
D
SER
170
L
LYS
166
D
LYS
171
L
PRO
154
D
PRO
159
L
VAL
155
D
VAL
160
L
THR
145
D
THR
150
L
LYS
149
D
LYS
154
L
TYR
192
D
TYR
196
L
HIS
198
D
HIS
202
L
SER
203
D
SER
205
L
VAL
209
D
VAL
211
150
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