0.012629 0.007292 0.000000 0.000000 0.014583 0.000000 0.000000 0.000000 0.009269 0.00000 0.00000 0.00000 Bourne, C.R. Barrow, W.W. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 79.180 79.180 107.890 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C21 H28 N7 O17 P3 743.405 NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C27 H30 N6 O3 486.566 5-(3,4-dimethoxy-5-{(1E)-3-oxo-3-[(1S)-1-propylphthalazin-2(1H)-yl]prop-1-en-1-yl}benzyl)pyrimidine-2,4-diamine (S)-3-(5-((2,4-diaminopyrimidin-5-yl)methyl)-2,3-dimethoxyphenyl)-1-(1-propylphthalazin-2(1H)-yl)prop-2-en-1-one non-polymer C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N C N 124 N O N 125 N C N 126 N O N 127 N C N 128 N O N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 R P N 251 N O N 252 N O N 253 N O N 254 N C N 255 R C N 256 N O N 257 R C N 258 N O N 259 R C N 260 N O N 261 R C Y 262 N N Y 263 N C Y 264 N N Y 265 N C Y 266 N C N 267 N N Y 268 N N Y 269 N C Y 270 N N Y 271 N C N 272 N O N 273 N P N 274 N O N 275 N O N 276 N O N 277 N C N 278 R C N 279 N O N 280 S C N 281 N O N 282 R C N 283 N O N 284 R C Y 285 N N Y 286 N C Y 287 N C N 288 N C N 289 N O N 290 N N Y 291 N C Y 292 N C Y 293 N C N 294 N P N 295 N O N 296 N O N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N N N 327 S C N 328 N C N 329 N O N 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N C Y 335 N C Y 336 N C N 337 N O N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N N N 350 S C N 351 N C N 352 N O N 353 N C N 354 N C N 355 N C N 356 N O N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N N Y 367 N C Y 368 N C N 369 N C Y 370 N C Y 371 N C Y 372 N C N 373 N O N 374 N C Y 375 N C N 376 N O N 377 N C Y 378 N C N 379 N C N 380 N C N 381 N C N 382 N N N 383 N N N 384 N C N 385 S C N 386 N C N 387 N C N 388 N C Y 389 N C Y 390 N C Y 391 N C Y 392 N C Y 393 N C Y 394 N C N 395 N O Y 396 N C Y 397 N C Y 398 N N Y 399 N C N 400 N N Y 401 N N N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N N N 433 S C N 434 N C N 435 N O N 436 N C N 437 N O N 438 N O N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N N N 447 S C N 448 N C N 449 N O N 450 R C N 451 N O N 452 N C N 453 N O N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N N N 464 S C N 465 N C N 466 N O N 467 N C Y 468 N C Y 469 N C Y 470 N C Y 471 N N Y 472 N C Y 473 N C Y 474 N C Y 475 N C Y 476 N C N 477 N O N 478 N H N 479 N H N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N N N 491 S C N 492 N C N 493 N O N 494 N C Y 495 N C Y 496 N C Y 497 N C Y 498 N C Y 499 N C Y 500 N C N 501 N O N 502 N O N 503 N H N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 510 N H N 511 N H N 512 N H N 513 N H N 514 N N N 515 S C N 516 N C N 517 N O N 518 N C N 519 N C N 520 N C N 521 N O N 522 N H N 523 N H N 524 N H N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 532 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N doub N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing Y 260 N sing Y 261 N sing Y 262 N doub N 263 N sing Y 264 N sing Y 265 N sing Y 266 N doub N 267 N sing Y 268 N doub N 269 N sing N 270 N sing Y 271 N sing Y 272 N doub N 273 N sing Y 274 N sing N 275 N sing N 276 N doub N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing Y 297 N sing Y 298 N doub Y 299 N doub N 300 N sing N 301 N sing Y 302 N sing N 303 N doub N 304 N sing N 305 N sing N 306 N sing Y 307 N doub N 308 N sing Y 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N doub N 324 N sing N 325 N sing N 326 N sing N 327 N sing Y 328 N doub Y 329 N sing Y 330 N sing N 331 N sing Y 332 N doub N 333 N sing Y 334 N doub N 335 N sing Y 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N doub N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing Y 360 N doub Y 361 N sing Y 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing Y 367 N doub Y 368 N sing Y 369 N sing N 370 N sing N 371 N sing Y 372 N doub N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing Y 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 E sing Y 384 N doub N 385 N doub N 386 N sing N 387 N sing N 388 N sing N 389 N doub N 390 N sing N 391 N sing N 392 N sing N 393 N doub N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing Y 408 N doub Y 409 N sing Y 410 N doub Y 411 N sing N 412 N sing Y 413 N doub N 414 N sing Y 415 N sing N 416 N sing N 417 N sing N 418 N sing Y 419 N doub N 420 N sing Y 421 N sing N 422 N sing Y 423 N doub N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N doub N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N doub N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N doub N 462 N sing N 463 N sing N 464 N sing N 465 N sing Y 466 N doub Y 467 N sing Y 468 N sing N 469 N sing Y 470 N doub Y 471 N sing Y 472 N sing N 473 N sing Y 474 N sing Y 475 N doub N 476 N sing Y 477 N doub N 478 N sing Y 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N doub N 490 N sing N 491 N sing N 492 N sing N 493 N sing Y 494 N doub Y 495 N sing Y 496 N sing N 497 N sing Y 498 N doub N 499 N sing Y 500 N doub N 501 N sing Y 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N doub N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing N 524 N sing US Antimicrob.Agents Chemother. AMACCQ 0788 0066-4804 54 3825 3833 10.1128/AAC.00361-10 20606069 Inhibition of Antibiotic-Resistant Staphylococcus aureus by the Broad-Spectrum Dihydrofolate Reductase Inhibitor RAB1. 2010 US Antimicrob.agents chemother. AMACCQ 0788 0066-4804 53 3065 3073 Crystal structure of Bacillus anthracis dihydrofolate reductase with the dihydrophthalazine-based trimethoprim derivative RAB1 provides a structural explanation of potency and selectivity 2009 10.2210/pdb3m08/pdb pdb_00003m08 100 1 IMAGE PLATE RIGAKU RAXIS IV++ SINGLE WAVELENGTH M x-ray 1 1.54 1.0 1.54 ROTATING ANODE RIGAKU RUH3R 18440.076 Dihydrofolate reductase 1.5.1.3 1 man polymer 486.566 5-(3,4-dimethoxy-5-{(1E)-3-oxo-3-[(1S)-1-propylphthalazin-2(1H)-yl]prop-1-en-1-yl}benzyl)pyrimidine-2,4-diamine 1 syn non-polymer 743.405 NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 1 syn non-polymer 92.094 GLYCEROL 1 syn non-polymer 18.015 water 171 nat water DHFR no no TLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIE DIYQLPGHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKAVP R TLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIE DIYQLPGHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKAVP R A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample folA 1280 Staphylococcus aureus 469008 Escherichia coli BL21(DE3) plasmid pET101d 1 2.65 53.54 sitting drop 6.5 15% PEG 6000, 0.15 M sodium acetate, 0.1M MES buffer, pH 6.5, sitting drop, temperature 298K 298 chem_comp_atom chem_comp_bond database_2 struct_ref_seq_dif struct_site repository Initial release Version format compliance Data collection Database references Derived calculations 1 0 2010-07-14 1 1 2011-07-13 1 2 2024-02-21 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2010-03-02 REL REL RAR 5-(3,4-dimethoxy-5-{(1E)-3-oxo-3-[(1S)-1-propylphthalazin-2(1H)-yl]prop-1-en-1-yl}benzyl)pyrimidine-2,4-diamine NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE GOL GLYCEROL HOH water RAR 200 2 RAR RAR 200 A NAP 201 3 NAP NAP 201 A GOL 202 4 GOL GOL 202 A HOH 162 5 HOH HOH 162 A HOH 163 5 HOH HOH 163 A HOH 164 5 HOH HOH 164 A HOH 165 5 HOH HOH 165 A HOH 166 5 HOH HOH 166 A HOH 167 5 HOH HOH 167 A HOH 168 5 HOH HOH 168 A HOH 169 5 HOH HOH 169 A HOH 170 5 HOH HOH 170 A HOH 171 5 HOH HOH 171 A HOH 172 5 HOH HOH 172 A HOH 173 5 HOH HOH 173 A HOH 174 5 HOH HOH 174 A HOH 175 5 HOH HOH 175 A HOH 176 5 HOH HOH 176 A HOH 177 5 HOH HOH 177 A HOH 178 5 HOH HOH 178 A HOH 179 5 HOH HOH 179 A HOH 180 5 HOH HOH 180 A HOH 181 5 HOH HOH 181 A HOH 182 5 HOH HOH 182 A HOH 183 5 HOH HOH 183 A HOH 184 5 HOH HOH 184 A HOH 185 5 HOH HOH 185 A HOH 186 5 HOH HOH 186 A HOH 187 5 HOH HOH 187 A HOH 188 5 HOH HOH 188 A HOH 189 5 HOH HOH 189 A HOH 190 5 HOH HOH 190 A HOH 191 5 HOH HOH 191 A HOH 192 5 HOH HOH 192 A HOH 193 5 HOH HOH 193 A HOH 194 5 HOH HOH 194 A HOH 195 5 HOH HOH 195 A HOH 196 5 HOH HOH 196 A HOH 197 5 HOH HOH 197 A HOH 198 5 HOH HOH 198 A HOH 199 5 HOH HOH 199 A HOH 203 5 HOH HOH 203 A HOH 204 5 HOH HOH 204 A HOH 205 5 HOH HOH 205 A HOH 206 5 HOH HOH 206 A HOH 207 5 HOH HOH 207 A HOH 208 5 HOH HOH 208 A HOH 209 5 HOH HOH 209 A HOH 210 5 HOH HOH 210 A HOH 211 5 HOH HOH 211 A HOH 212 5 HOH HOH 212 A HOH 213 5 HOH HOH 213 A HOH 214 5 HOH HOH 214 A HOH 215 5 HOH HOH 215 A HOH 216 5 HOH HOH 216 A HOH 217 5 HOH HOH 217 A HOH 218 5 HOH HOH 218 A HOH 219 5 HOH HOH 219 A HOH 220 5 HOH HOH 220 A HOH 221 5 HOH HOH 221 A HOH 222 5 HOH HOH 222 A HOH 223 5 HOH HOH 223 A HOH 224 5 HOH HOH 224 A HOH 225 5 HOH HOH 225 A HOH 226 5 HOH HOH 226 A HOH 227 5 HOH HOH 227 A HOH 228 5 HOH HOH 228 A HOH 229 5 HOH HOH 229 A HOH 230 5 HOH HOH 230 A HOH 231 5 HOH HOH 231 A HOH 232 5 HOH HOH 232 A HOH 233 5 HOH HOH 233 A HOH 234 5 HOH HOH 234 A HOH 235 5 HOH HOH 235 A HOH 236 5 HOH HOH 236 A HOH 237 5 HOH HOH 237 A HOH 238 5 HOH HOH 238 A HOH 239 5 HOH HOH 239 A HOH 240 5 HOH HOH 240 A HOH 241 5 HOH HOH 241 A HOH 242 5 HOH HOH 242 A HOH 243 5 HOH HOH 243 A HOH 244 5 HOH HOH 244 A HOH 245 5 HOH HOH 245 A HOH 246 5 HOH HOH 246 A HOH 247 5 HOH HOH 247 A HOH 248 5 HOH HOH 248 A HOH 249 5 HOH HOH 249 A HOH 250 5 HOH HOH 250 A HOH 251 5 HOH HOH 251 A HOH 252 5 HOH HOH 252 A HOH 253 5 HOH HOH 253 A HOH 254 5 HOH HOH 254 A HOH 255 5 HOH HOH 255 A HOH 256 5 HOH HOH 256 A HOH 257 5 HOH HOH 257 A HOH 258 5 HOH HOH 258 A HOH 259 5 HOH HOH 259 A HOH 260 5 HOH HOH 260 A HOH 261 5 HOH HOH 261 A HOH 262 5 HOH HOH 262 A HOH 263 5 HOH HOH 263 A HOH 264 5 HOH HOH 264 A HOH 265 5 HOH HOH 265 A HOH 266 5 HOH HOH 266 A HOH 267 5 HOH HOH 267 A HOH 268 5 HOH HOH 268 A HOH 269 5 HOH HOH 269 A HOH 270 5 HOH HOH 270 A HOH 271 5 HOH HOH 271 A HOH 272 5 HOH HOH 272 A HOH 273 5 HOH HOH 273 A HOH 274 5 HOH HOH 274 A HOH 275 5 HOH HOH 275 A HOH 276 5 HOH HOH 276 A HOH 277 5 HOH HOH 277 A HOH 278 5 HOH HOH 278 A HOH 279 5 HOH HOH 279 A HOH 280 5 HOH HOH 280 A HOH 281 5 HOH HOH 281 A HOH 282 5 HOH HOH 282 A HOH 283 5 HOH HOH 283 A HOH 284 5 HOH HOH 284 A HOH 285 5 HOH HOH 285 A HOH 286 5 HOH HOH 286 A HOH 287 5 HOH HOH 287 A HOH 288 5 HOH HOH 288 A HOH 289 5 HOH HOH 289 A HOH 290 5 HOH HOH 290 A HOH 291 5 HOH HOH 291 A HOH 292 5 HOH HOH 292 A HOH 293 5 HOH HOH 293 A HOH 294 5 HOH HOH 294 A HOH 295 5 HOH HOH 295 A HOH 296 5 HOH HOH 296 A HOH 297 5 HOH HOH 297 A HOH 298 5 HOH HOH 298 A HOH 299 5 HOH HOH 299 A HOH 300 5 HOH HOH 300 A HOH 301 5 HOH HOH 301 A HOH 302 5 HOH HOH 302 A HOH 303 5 HOH HOH 303 A HOH 304 5 HOH HOH 304 A HOH 305 5 HOH HOH 305 A HOH 306 5 HOH HOH 306 A HOH 307 5 HOH HOH 307 A HOH 308 5 HOH HOH 308 A HOH 309 5 HOH HOH 309 A HOH 310 5 HOH HOH 310 A HOH 311 5 HOH HOH 311 A HOH 312 5 HOH HOH 312 A HOH 313 5 HOH HOH 313 A HOH 314 5 HOH HOH 314 A HOH 315 5 HOH HOH 315 A HOH 316 5 HOH HOH 316 A HOH 317 5 HOH HOH 317 A HOH 318 5 HOH HOH 318 A HOH 319 5 HOH HOH 319 A HOH 320 5 HOH HOH 320 A HOH 321 5 HOH HOH 321 A HOH 322 5 HOH HOH 322 A HOH 323 5 HOH HOH 323 A HOH 324 5 HOH HOH 324 A HOH 325 5 HOH HOH 325 A HOH 326 5 HOH HOH 326 A HOH 327 5 HOH HOH 327 A HOH 328 5 HOH HOH 328 A HOH 329 5 HOH HOH 329 A HOH 330 5 HOH HOH 330 A HOH 331 5 HOH HOH 331 A HOH 332 5 HOH HOH 332 A HOH 333 5 HOH HOH 333 A HOH 334 5 HOH HOH 334 A HOH 335 5 HOH HOH 335 A Phaser MODE: MR_AUTO THR 1 n 1 THR 1 A LEU 2 n 2 LEU 2 A SER 3 n 3 SER 3 A ILE 4 n 4 ILE 4 A LEU 5 n 5 LEU 5 A VAL 6 n 6 VAL 6 A ALA 7 n 7 ALA 7 A HIS 8 n 8 HIS 8 A ASP 9 n 9 ASP 9 A LEU 10 n 10 LEU 10 A GLN 11 n 11 GLN 11 A ARG 12 n 12 ARG 12 A VAL 13 n 13 VAL 13 A ILE 14 n 14 ILE 14 A GLY 15 n 15 GLY 15 A PHE 16 n 16 PHE 16 A GLU 17 n 17 GLU 17 A ASN 18 n 18 ASN 18 A GLN 19 n 19 GLN 19 A LEU 20 n 20 LEU 20 A PRO 21 n 21 PRO 21 A TRP 22 n 22 TRP 22 A HIS 23 n 23 HIS 23 A LEU 24 n 24 LEU 24 A PRO 25 n 25 PRO 25 A ASN 26 n 26 ASN 26 A ASP 27 n 27 ASP 27 A LEU 28 n 28 LEU 28 A LYS 29 n 29 LYS 29 A HIS 30 n 30 HIS 30 A VAL 31 n 31 VAL 31 A LYS 32 n 32 LYS 32 A LYS 33 n 33 LYS 33 A LEU 34 n 34 LEU 34 A SER 35 n 35 SER 35 A THR 36 n 36 THR 36 A GLY 37 n 37 GLY 37 A HIS 38 n 38 HIS 38 A THR 39 n 39 THR 39 A LEU 40 n 40 LEU 40 A VAL 41 n 41 VAL 41 A MET 42 n 42 MET 42 A GLY 43 n 43 GLY 43 A ARG 44 n 44 ARG 44 A LYS 45 n 45 LYS 45 A THR 46 n 46 THR 46 A PHE 47 n 47 PHE 47 A GLU 48 n 48 GLU 48 A SER 49 n 49 SER 49 A ILE 50 n 50 ILE 50 A GLY 51 n 51 GLY 51 A LYS 52 n 52 LYS 52 A PRO 53 n 53 PRO 53 A LEU 54 n 54 LEU 54 A PRO 55 n 55 PRO 55 A ASN 56 n 56 ASN 56 A ARG 57 n 57 ARG 57 A ARG 58 n 58 ARG 58 A ASN 59 n 59 ASN 59 A VAL 60 n 60 VAL 60 A VAL 61 n 61 VAL 61 A LEU 62 n 62 LEU 62 A THR 63 n 63 THR 63 A SER 64 n 64 SER 64 A ASP 65 n 65 ASP 65 A THR 66 n 66 THR 66 A SER 67 n 67 SER 67 A PHE 68 n 68 PHE 68 A ASN 69 n 69 ASN 69 A VAL 70 n 70 VAL 70 A GLU 71 n 71 GLU 71 A GLY 72 n 72 GLY 72 A VAL 73 n 73 VAL 73 A ASP 74 n 74 ASP 74 A VAL 75 n 75 VAL 75 A ILE 76 n 76 ILE 76 A HIS 77 n 77 HIS 77 A SER 78 n 78 SER 78 A ILE 79 n 79 ILE 79 A GLU 80 n 80 GLU 80 A ASP 81 n 81 ASP 81 A ILE 82 n 82 ILE 82 A TYR 83 n 83 TYR 83 A GLN 84 n 84 GLN 84 A LEU 85 n 85 LEU 85 A PRO 86 n 86 PRO 86 A GLY 87 n 87 GLY 87 A HIS 88 n 88 HIS 88 A VAL 89 n 89 VAL 89 A PHE 90 n 90 PHE 90 A ILE 91 n 91 ILE 91 A PHE 92 n 92 PHE 92 A GLY 93 n 93 GLY 93 A GLY 94 n 94 GLY 94 A GLN 95 n 95 GLN 95 A THR 96 n 96 THR 96 A LEU 97 n 97 LEU 97 A PHE 98 n 98 PHE 98 A GLU 99 n 99 GLU 99 A GLU 100 n 100 GLU 100 A MET 101 n 101 MET 101 A ILE 102 n 102 ILE 102 A ASP 103 n 103 ASP 103 A LYS 104 n 104 LYS 104 A VAL 105 n 105 VAL 105 A ASP 106 n 106 ASP 106 A ASP 107 n 107 ASP 107 A MET 108 n 108 MET 108 A TYR 109 n 109 TYR 109 A ILE 110 n 110 ILE 110 A THR 111 n 111 THR 111 A VAL 112 n 112 VAL 112 A ILE 113 n 113 ILE 113 A GLU 114 n 114 GLU 114 A GLY 115 n 115 GLY 115 A LYS 116 n 116 LYS 116 A PHE 117 n 117 PHE 117 A ARG 118 n 118 ARG 118 A GLY 119 n 119 GLY 119 A ASP 120 n 120 ASP 120 A THR 121 n 121 THR 121 A PHE 122 n 122 PHE 122 A PHE 123 n 123 PHE 123 A PRO 124 n 124 PRO 124 A PRO 125 n 125 PRO 125 A TYR 126 n 126 TYR 126 A THR 127 n 127 THR 127 A PHE 128 n 128 PHE 128 A GLU 129 n 129 GLU 129 A ASP 130 n 130 ASP 130 A TRP 131 n 131 TRP 131 A GLU 132 n 132 GLU 132 A VAL 133 n 133 VAL 133 A ALA 134 n 134 ALA 134 A SER 135 n 135 SER 135 A SER 136 n 136 SER 136 A VAL 137 n 137 VAL 137 A GLU 138 n 138 GLU 138 A GLY 139 n 139 GLY 139 A LYS 140 n 140 LYS 140 A LEU 141 n 141 LEU 141 A ASP 142 n 142 ASP 142 A GLU 143 n 143 GLU 143 A LYS 144 n 144 LYS 144 A ASN 145 n 145 ASN 145 A THR 146 n 146 THR 146 A ILE 147 n 147 ILE 147 A PRO 148 n 148 PRO 148 A HIS 149 n 149 HIS 149 A THR 150 n 150 THR 150 A PHE 151 n 151 PHE 151 A LEU 152 n 152 LEU 152 A HIS 153 n 153 HIS 153 A LEU 154 n 154 LEU 154 A ILE 155 n 155 ILE 155 A ARG 156 n 156 ARG 156 A LYS 157 n 157 LYS 157 A ALA 158 n 158 ALA 158 A VAL 159 n 159 VAL 159 A PRO 160 n 160 PRO 160 A ARG 161 n 161 ARG 161 A 0.5214 0.1513 -0.0137 0.0704 0.0175 0.9081 0.0159 -0.0062 0.1132 0.0576 0.0121 0.1276 -0.2665 0.0113 -0.0532 0.1381 -0.0067 0.0580 0.0423 -0.0062 0.1017 refined -4.2230 30.7603 -5.2561 X-RAY DIFFRACTION 0.7974 0.2745 -0.1377 0.2204 -0.0743 0.4894 0.1755 -0.2646 0.2991 0.2792 -0.1118 -0.0773 -0.2507 0.1558 -0.0816 0.2450 -0.0780 0.0261 0.0743 -0.0327 0.1379 refined 6.6237 36.3779 5.1710 X-RAY DIFFRACTION 0.6558 0.1083 -0.2250 0.4250 -0.1975 0.5373 0.0011 -0.0401 -0.0667 0.0139 0.0432 -0.0821 -0.1169 0.0096 -0.0202 0.0666 0.0014 0.0225 0.0232 0.0086 0.0509 refined -3.9032 19.0472 -3.6097 X-RAY DIFFRACTION A 1 A 56 X-RAY DIFFRACTION 1 (chain A and resid 1:56) A 57 A 89 X-RAY DIFFRACTION 2 (chain A and resid 57:89) A 90 A 161 X-RAY DIFFRACTION 3 (chain A and resid 90:161) author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ASP 74 A O ASP 74 A N ASN 59 A N ASN 59 A O VAL 60 A O VAL 60 A N LEU 40 A N LEU 40 A N VAL 41 A N VAL 41 A O PHE 92 A O PHE 92 A O ILE 91 A O ILE 91 A N SER 3 A N SER 3 A N ILE 4 A N ILE 4 A O TYR 109 A O TYR 109 A N ILE 110 A N ILE 110 A O LEU 152 A O LEU 152 A O ILE 155 A O ILE 155 A N GLU 132 A N GLU 132 A N ILE 14 A N ILE 14 A O THR 121 A O THR 121 1 A CG GLU 71 A CG GLU 71 1 Y 1 A CD GLU 71 A CD GLU 71 1 Y 1 A OE1 GLU 71 A OE1 GLU 71 1 Y 1 A OE2 GLU 71 A OE2 GLU 71 1 Y 1 A CG GLU 143 A CG GLU 143 1 Y 1 A CD GLU 143 A CD GLU 143 1 Y 1 A OE1 GLU 143 A OE1 GLU 143 1 Y 1 A OE2 GLU 143 A OE2 GLU 143 1 Y 1 A CG LYS 144 A CG LYS 144 1 Y 1 A CD LYS 144 A CD LYS 144 1 Y 1 A CE LYS 144 A CE LYS 144 1 Y 1 A NZ LYS 144 A NZ LYS 144 1 Y 1 A C20 RAR 200 WRONG HAND B 1 A A OD1 HG1 ASP THR 27 111 1.51 1 A A HH21 HH21 ARG ARG 118 118 0.95 1_555 11_554 1 A A H H12 TYR GOL 126 202 1.05 1_555 5_554 1 A A HD3 H11 ARG GOL 12 202 1.33 1_555 5_554 1 A HIS 38 -118.00 -151.12 1 A ASN 56 72.29 31.27 1 A ASP 142 -164.00 -160.36 57.30 19.978 4.13 -0.782 0.000 0.000 -0.782 -0.000 1.563 0.213 0.175 0.179 2.014 31.849 1366 13579 10.060 98.410 1.00 0.45 0.210 1 0.01 MOLECULAR REPLACEMENT 0.900 1.110 ML FLAT BULK SOLVENT MODEL 38.685 0.359 2.014 31.849 171 1551 90 0 1290 0.005 1443 1.034 1972 0.081 218 0.007 240 28.591 592 0.291 0.189 2.086 132 1163 1295 10 96.000 0.191 0.166 2.170 129 1152 1281 10 97.000 0.225 0.159 2.268 133 1194 1327 10 97.000 0.223 0.166 2.388 132 1181 1313 10 98.000 0.211 0.165 2.537 135 1199 1334 10 98.000 0.197 0.178 2.733 136 1224 1360 10 99.000 0.226 0.176 3.008 136 1221 1357 10 99.000 0.207 0.173 3.443 139 1253 1392 10 100.000 0.186 0.155 4.336 142 1268 1410 10 100.000 0.203 0.179 31.853 152 1358 1510 10 99.000 2.014 42.398 3M08 13728 13728 0.037 1 23.700 5.100 99.500 0.118 2.014 2.12 5.8 9793 1918 0.118 5.10 98.70 0.088 2.12 2.25 7.7 9585 1840 0.088 5.20 98.90 0.069 2.25 2.41 9.8 9033 1737 0.069 5.20 99.30 0.061 2.41 2.60 9.8 8367 1614 0.061 5.20 99.60 0.053 2.60 2.85 10.6 7925 1532 0.053 5.20 99.80 0.038 2.85 3.18 14.4 7182 1391 0.038 5.20 100.00 0.027 3.18 3.68 19.0 6269 1231 0.027 5.10 100.00 0.022 3.68 4.50 24.1 5398 1073 0.022 5.00 100.00 0.021 4.50 6.37 22.3 4215 863 0.021 4.90 100.00 0.022 6.37 42.40 13.2 2253 529 0.022 4.30 99.60 data reduction Andrew G.W. Leslie andrew@mrc-lmb.cam.ac.uk http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ MOSFLM package data scaling Phil R. Evans pre@mrc-lmb.cam.ac.uk 2009/03/31 Fortran_77 http://www.ccp4.ac.uk/dist/html/scala.html SCALA other 3.3.15 phasing Randy J. Read cimr-phaser@lists.cam.ac.uk Thu Nov 22 16:35:27 2007 http://www-structmed.cimr.cam.ac.uk/phaser/ PHASER program 2.1.1 refinement Paul D. Adams PDAdams@lbl.gov C++ http://www.phenix-online.org/ PHENIX package 1.5_2 data extraction PDB help@deposit.rcsb.org June 11, 2008 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.005 N Wild Type Dihydrofolate Reductase from Staphylococcus aureus with inhibitor RAB1 1 N N 2 N N 3 N N 4 N N 5 N N A LEU 24 A LEU 24 HELX_P A THR 36 A THR 36 1 1 13 A ARG 44 A ARG 44 HELX_P A GLY 51 A GLY 51 1 2 8 A SER 78 A SER 78 HELX_P A LEU 85 A LEU 85 5 3 8 A GLY 94 A GLY 94 HELX_P A ILE 102 A ILE 102 1 4 9 Oxidoreductase/Oxidoreductase inhibitor folate, dhfr, antimicrobial, antibiotic resistance, NADP, One-carbon metabolism, Oxidoreductase', Oxidoreductase-Oxidoreductase inhibitor complex A GLY 93 A GLY 93 1 A GLY 94 A GLY 94 -0.11 DYR_STAAU UNP 1 2 P0A017 TLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIE DIYQLPGHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRK 2 158 3M08 1 157 P0A017 A 1 1 157 1 expression tag ALA 158 3M08 A P0A017 UNP 158 1 expression tag VAL 159 3M08 A P0A017 UNP 159 1 expression tag PRO 160 3M08 A P0A017 UNP 160 1 expression tag ARG 161 3M08 A P0A017 UNP 161 8 2 parallel parallel parallel parallel parallel anti-parallel anti-parallel anti-parallel A VAL 73 A VAL 73 A ILE 76 A ILE 76 A ARG 58 A ARG 58 A LEU 62 A LEU 62 A THR 39 A THR 39 A GLY 43 A GLY 43 A VAL 89 A VAL 89 A GLY 93 A GLY 93 A LEU 2 A LEU 2 A ASP 9 A ASP 9 A ASP 107 A ASP 107 A ILE 113 A ILE 113 A HIS 149 A HIS 149 A ARG 156 A ARG 156 A TRP 131 A TRP 131 A GLU 138 A GLU 138 A VAL 13 A VAL 13 A GLY 15 A GLY 15 A THR 121 A THR 121 A PHE 122 A PHE 122 BINDING SITE FOR RESIDUE RAR A 200 A RAR 200 Software 20 BINDING SITE FOR RESIDUE NAP A 201 A NAP 201 Software 33 BINDING SITE FOR RESIDUE GOL A 202 A GOL 202 Software 5 A LEU 5 A LEU 5 20 1_555 A VAL 6 A VAL 6 20 1_555 A ALA 7 A ALA 7 20 1_555 A LEU 20 A LEU 20 20 1_555 A ASP 27 A ASP 27 20 1_555 A LEU 28 A LEU 28 20 1_555 A LYS 29 A LYS 29 20 1_555 A VAL 31 A VAL 31 20 1_555 A LYS 32 A LYS 32 20 1_555 A SER 49 A SER 49 20 1_555 A ILE 50 A ILE 50 20 1_555 A LYS 52 A LYS 52 20 1_555 A LEU 54 A LEU 54 20 1_555 A PRO 55 A PRO 55 20 1_555 A ARG 57 A ARG 57 20 1_555 A PHE 92 A PHE 92 20 1_555 A THR 111 A THR 111 20 1_555 A NAP 201 C NAP 20 1_555 A HOH 206 E HOH 20 1_555 A HOH 319 E HOH 20 1_555 A VAL 6 A VAL 6 33 1_555 A ALA 7 A ALA 7 33 1_555 A ILE 14 A ILE 14 33 1_555 A GLY 15 A GLY 15 33 1_555 A ASN 18 A ASN 18 33 1_555 A GLN 19 A GLN 19 33 1_555 A LEU 20 A LEU 20 33 1_555 A TRP 22 A TRP 22 33 1_555 A GLY 43 A GLY 43 33 1_555 A ARG 44 A ARG 44 33 1_555 A LYS 45 A LYS 45 33 1_555 A THR 46 A THR 46 33 1_555 A LEU 62 A LEU 62 33 1_555 A THR 63 A THR 63 33 1_555 A SER 64 A SER 64 33 1_555 A HIS 77 A HIS 77 33 1_555 A ILE 79 A ILE 79 33 1_555 A PHE 92 A PHE 92 33 1_555 A GLY 93 A GLY 93 33 1_555 A GLY 94 A GLY 94 33 1_555 A GLN 95 A GLN 95 33 1_555 A THR 96 A THR 96 33 1_555 A GLU 100 A GLU 100 33 1_555 A THR 121 A THR 121 33 1_555 A HOH 164 E HOH 33 1_555 A HOH 172 E HOH 33 1_555 A HOH 194 E HOH 33 1_555 A RAR 200 B RAR 33 1_555 A HOH 208 E HOH 33 1_555 A HOH 210 E HOH 33 1_555 A HOH 241 E HOH 33 1_555 A HOH 244 E HOH 33 1_555 A HOH 317 E HOH 33 1_555 A ARG 12 A ARG 12 5 6_555 A PRO 125 A PRO 125 5 6_555 A TYR 126 A TYR 126 5 6_555 A PHE 128 A PHE 128 5 6_555 A GLU 132 A GLU 132 5 1_555 178 P 61 2 2