0.012629
0.007292
0.000000
0.000000
0.014583
0.000000
0.000000
0.000000
0.009269
0.00000
0.00000
0.00000
Bourne, C.R.
Barrow, W.W.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
79.180
79.180
107.890
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C21 H28 N7 O17 P3
743.405
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C27 H30 N6 O3
486.566
5-(3,4-dimethoxy-5-{(1E)-3-oxo-3-[(1S)-1-propylphthalazin-2(1H)-yl]prop-1-en-1-yl}benzyl)pyrimidine-2,4-diamine
(S)-3-(5-((2,4-diaminopyrimidin-5-yl)methyl)-2,3-dimethoxyphenyl)-1-(1-propylphthalazin-2(1H)-yl)prop-2-en-1-one
non-polymer
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
C
N
124
N
O
N
125
N
C
N
126
N
O
N
127
N
C
N
128
N
O
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
R
P
N
251
N
O
N
252
N
O
N
253
N
O
N
254
N
C
N
255
R
C
N
256
N
O
N
257
R
C
N
258
N
O
N
259
R
C
N
260
N
O
N
261
R
C
Y
262
N
N
Y
263
N
C
Y
264
N
N
Y
265
N
C
Y
266
N
C
N
267
N
N
Y
268
N
N
Y
269
N
C
Y
270
N
N
Y
271
N
C
N
272
N
O
N
273
N
P
N
274
N
O
N
275
N
O
N
276
N
O
N
277
N
C
N
278
R
C
N
279
N
O
N
280
S
C
N
281
N
O
N
282
R
C
N
283
N
O
N
284
R
C
Y
285
N
N
Y
286
N
C
Y
287
N
C
N
288
N
C
N
289
N
O
N
290
N
N
Y
291
N
C
Y
292
N
C
Y
293
N
C
N
294
N
P
N
295
N
O
N
296
N
O
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
N
N
327
S
C
N
328
N
C
N
329
N
O
N
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
C
Y
336
N
C
N
337
N
O
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
N
N
350
S
C
N
351
N
C
N
352
N
O
N
353
N
C
N
354
N
C
N
355
N
C
N
356
N
O
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
N
Y
367
N
C
Y
368
N
C
N
369
N
C
Y
370
N
C
Y
371
N
C
Y
372
N
C
N
373
N
O
N
374
N
C
Y
375
N
C
N
376
N
O
N
377
N
C
Y
378
N
C
N
379
N
C
N
380
N
C
N
381
N
C
N
382
N
N
N
383
N
N
N
384
N
C
N
385
S
C
N
386
N
C
N
387
N
C
N
388
N
C
Y
389
N
C
Y
390
N
C
Y
391
N
C
Y
392
N
C
Y
393
N
C
Y
394
N
C
N
395
N
O
Y
396
N
C
Y
397
N
C
Y
398
N
N
Y
399
N
C
N
400
N
N
Y
401
N
N
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
N
N
433
S
C
N
434
N
C
N
435
N
O
N
436
N
C
N
437
N
O
N
438
N
O
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
N
N
447
S
C
N
448
N
C
N
449
N
O
N
450
R
C
N
451
N
O
N
452
N
C
N
453
N
O
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
N
N
464
S
C
N
465
N
C
N
466
N
O
N
467
N
C
Y
468
N
C
Y
469
N
C
Y
470
N
C
Y
471
N
N
Y
472
N
C
Y
473
N
C
Y
474
N
C
Y
475
N
C
Y
476
N
C
N
477
N
O
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
H
N
489
N
H
N
490
N
N
N
491
S
C
N
492
N
C
N
493
N
O
N
494
N
C
Y
495
N
C
Y
496
N
C
Y
497
N
C
Y
498
N
C
Y
499
N
C
Y
500
N
C
N
501
N
O
N
502
N
O
N
503
N
H
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
H
N
508
N
H
N
509
N
H
N
510
N
H
N
511
N
H
N
512
N
H
N
513
N
H
N
514
N
N
N
515
S
C
N
516
N
C
N
517
N
O
N
518
N
C
N
519
N
C
N
520
N
C
N
521
N
O
N
522
N
H
N
523
N
H
N
524
N
H
N
525
N
H
N
526
N
H
N
527
N
H
N
528
N
H
N
529
N
H
N
530
N
H
N
531
N
H
N
532
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
Y
260
N
sing
Y
261
N
sing
Y
262
N
doub
N
263
N
sing
Y
264
N
sing
Y
265
N
sing
Y
266
N
doub
N
267
N
sing
Y
268
N
doub
N
269
N
sing
N
270
N
sing
Y
271
N
sing
Y
272
N
doub
N
273
N
sing
Y
274
N
sing
N
275
N
sing
N
276
N
doub
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
Y
297
N
sing
Y
298
N
doub
Y
299
N
doub
N
300
N
sing
N
301
N
sing
Y
302
N
sing
N
303
N
doub
N
304
N
sing
N
305
N
sing
N
306
N
sing
Y
307
N
doub
N
308
N
sing
Y
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
doub
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
Y
328
N
doub
Y
329
N
sing
Y
330
N
sing
N
331
N
sing
Y
332
N
doub
N
333
N
sing
Y
334
N
doub
N
335
N
sing
Y
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
doub
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
Y
360
N
doub
Y
361
N
sing
Y
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
Y
367
N
doub
Y
368
N
sing
Y
369
N
sing
N
370
N
sing
N
371
N
sing
Y
372
N
doub
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
Y
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
E
sing
Y
384
N
doub
N
385
N
doub
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
doub
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
doub
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
Y
408
N
doub
Y
409
N
sing
Y
410
N
doub
Y
411
N
sing
N
412
N
sing
Y
413
N
doub
N
414
N
sing
Y
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
Y
419
N
doub
N
420
N
sing
Y
421
N
sing
N
422
N
sing
Y
423
N
doub
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
doub
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
doub
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
doub
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
Y
466
N
doub
Y
467
N
sing
Y
468
N
sing
N
469
N
sing
Y
470
N
doub
Y
471
N
sing
Y
472
N
sing
N
473
N
sing
Y
474
N
sing
Y
475
N
doub
N
476
N
sing
Y
477
N
doub
N
478
N
sing
Y
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
doub
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
Y
494
N
doub
Y
495
N
sing
Y
496
N
sing
N
497
N
sing
Y
498
N
doub
N
499
N
sing
Y
500
N
doub
N
501
N
sing
Y
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
N
512
N
sing
N
513
N
doub
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
N
523
N
sing
N
524
N
sing
US
Antimicrob.Agents Chemother.
AMACCQ
0788
0066-4804
54
3825
3833
10.1128/AAC.00361-10
20606069
Inhibition of Antibiotic-Resistant Staphylococcus aureus by the Broad-Spectrum Dihydrofolate Reductase Inhibitor RAB1.
2010
US
Antimicrob.agents chemother.
AMACCQ
0788
0066-4804
53
3065
3073
Crystal structure of Bacillus anthracis dihydrofolate reductase with the dihydrophthalazine-based trimethoprim derivative RAB1 provides a structural explanation of potency and selectivity
2009
10.2210/pdb3m08/pdb
pdb_00003m08
100
1
IMAGE PLATE
RIGAKU RAXIS IV++
SINGLE WAVELENGTH
M
x-ray
1
1.54
1.0
1.54
ROTATING ANODE
RIGAKU RUH3R
18440.076
Dihydrofolate reductase
1.5.1.3
1
man
polymer
486.566
5-(3,4-dimethoxy-5-{(1E)-3-oxo-3-[(1S)-1-propylphthalazin-2(1H)-yl]prop-1-en-1-yl}benzyl)pyrimidine-2,4-diamine
1
syn
non-polymer
743.405
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
1
syn
non-polymer
92.094
GLYCEROL
1
syn
non-polymer
18.015
water
171
nat
water
DHFR
no
no
TLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIE
DIYQLPGHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKAVP
R
TLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIE
DIYQLPGHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKAVP
R
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
folA
1280
Staphylococcus aureus
469008
Escherichia coli
BL21(DE3)
plasmid
pET101d
1
2.65
53.54
sitting drop
6.5
15% PEG 6000, 0.15 M sodium acetate, 0.1M MES buffer, pH 6.5, sitting drop, temperature 298K
298
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Data collection
Database references
Derived calculations
1
0
2010-07-14
1
1
2011-07-13
1
2
2024-02-21
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2010-03-02
REL
REL
RAR
5-(3,4-dimethoxy-5-{(1E)-3-oxo-3-[(1S)-1-propylphthalazin-2(1H)-yl]prop-1-en-1-yl}benzyl)pyrimidine-2,4-diamine
NAP
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
GOL
GLYCEROL
HOH
water
RAR
200
2
RAR
RAR
200
A
NAP
201
3
NAP
NAP
201
A
GOL
202
4
GOL
GOL
202
A
HOH
162
5
HOH
HOH
162
A
HOH
163
5
HOH
HOH
163
A
HOH
164
5
HOH
HOH
164
A
HOH
165
5
HOH
HOH
165
A
HOH
166
5
HOH
HOH
166
A
HOH
167
5
HOH
HOH
167
A
HOH
168
5
HOH
HOH
168
A
HOH
169
5
HOH
HOH
169
A
HOH
170
5
HOH
HOH
170
A
HOH
171
5
HOH
HOH
171
A
HOH
172
5
HOH
HOH
172
A
HOH
173
5
HOH
HOH
173
A
HOH
174
5
HOH
HOH
174
A
HOH
175
5
HOH
HOH
175
A
HOH
176
5
HOH
HOH
176
A
HOH
177
5
HOH
HOH
177
A
HOH
178
5
HOH
HOH
178
A
HOH
179
5
HOH
HOH
179
A
HOH
180
5
HOH
HOH
180
A
HOH
181
5
HOH
HOH
181
A
HOH
182
5
HOH
HOH
182
A
HOH
183
5
HOH
HOH
183
A
HOH
184
5
HOH
HOH
184
A
HOH
185
5
HOH
HOH
185
A
HOH
186
5
HOH
HOH
186
A
HOH
187
5
HOH
HOH
187
A
HOH
188
5
HOH
HOH
188
A
HOH
189
5
HOH
HOH
189
A
HOH
190
5
HOH
HOH
190
A
HOH
191
5
HOH
HOH
191
A
HOH
192
5
HOH
HOH
192
A
HOH
193
5
HOH
HOH
193
A
HOH
194
5
HOH
HOH
194
A
HOH
195
5
HOH
HOH
195
A
HOH
196
5
HOH
HOH
196
A
HOH
197
5
HOH
HOH
197
A
HOH
198
5
HOH
HOH
198
A
HOH
199
5
HOH
HOH
199
A
HOH
203
5
HOH
HOH
203
A
HOH
204
5
HOH
HOH
204
A
HOH
205
5
HOH
HOH
205
A
HOH
206
5
HOH
HOH
206
A
HOH
207
5
HOH
HOH
207
A
HOH
208
5
HOH
HOH
208
A
HOH
209
5
HOH
HOH
209
A
HOH
210
5
HOH
HOH
210
A
HOH
211
5
HOH
HOH
211
A
HOH
212
5
HOH
HOH
212
A
HOH
213
5
HOH
HOH
213
A
HOH
214
5
HOH
HOH
214
A
HOH
215
5
HOH
HOH
215
A
HOH
216
5
HOH
HOH
216
A
HOH
217
5
HOH
HOH
217
A
HOH
218
5
HOH
HOH
218
A
HOH
219
5
HOH
HOH
219
A
HOH
220
5
HOH
HOH
220
A
HOH
221
5
HOH
HOH
221
A
HOH
222
5
HOH
HOH
222
A
HOH
223
5
HOH
HOH
223
A
HOH
224
5
HOH
HOH
224
A
HOH
225
5
HOH
HOH
225
A
HOH
226
5
HOH
HOH
226
A
HOH
227
5
HOH
HOH
227
A
HOH
228
5
HOH
HOH
228
A
HOH
229
5
HOH
HOH
229
A
HOH
230
5
HOH
HOH
230
A
HOH
231
5
HOH
HOH
231
A
HOH
232
5
HOH
HOH
232
A
HOH
233
5
HOH
HOH
233
A
HOH
234
5
HOH
HOH
234
A
HOH
235
5
HOH
HOH
235
A
HOH
236
5
HOH
HOH
236
A
HOH
237
5
HOH
HOH
237
A
HOH
238
5
HOH
HOH
238
A
HOH
239
5
HOH
HOH
239
A
HOH
240
5
HOH
HOH
240
A
HOH
241
5
HOH
HOH
241
A
HOH
242
5
HOH
HOH
242
A
HOH
243
5
HOH
HOH
243
A
HOH
244
5
HOH
HOH
244
A
HOH
245
5
HOH
HOH
245
A
HOH
246
5
HOH
HOH
246
A
HOH
247
5
HOH
HOH
247
A
HOH
248
5
HOH
HOH
248
A
HOH
249
5
HOH
HOH
249
A
HOH
250
5
HOH
HOH
250
A
HOH
251
5
HOH
HOH
251
A
HOH
252
5
HOH
HOH
252
A
HOH
253
5
HOH
HOH
253
A
HOH
254
5
HOH
HOH
254
A
HOH
255
5
HOH
HOH
255
A
HOH
256
5
HOH
HOH
256
A
HOH
257
5
HOH
HOH
257
A
HOH
258
5
HOH
HOH
258
A
HOH
259
5
HOH
HOH
259
A
HOH
260
5
HOH
HOH
260
A
HOH
261
5
HOH
HOH
261
A
HOH
262
5
HOH
HOH
262
A
HOH
263
5
HOH
HOH
263
A
HOH
264
5
HOH
HOH
264
A
HOH
265
5
HOH
HOH
265
A
HOH
266
5
HOH
HOH
266
A
HOH
267
5
HOH
HOH
267
A
HOH
268
5
HOH
HOH
268
A
HOH
269
5
HOH
HOH
269
A
HOH
270
5
HOH
HOH
270
A
HOH
271
5
HOH
HOH
271
A
HOH
272
5
HOH
HOH
272
A
HOH
273
5
HOH
HOH
273
A
HOH
274
5
HOH
HOH
274
A
HOH
275
5
HOH
HOH
275
A
HOH
276
5
HOH
HOH
276
A
HOH
277
5
HOH
HOH
277
A
HOH
278
5
HOH
HOH
278
A
HOH
279
5
HOH
HOH
279
A
HOH
280
5
HOH
HOH
280
A
HOH
281
5
HOH
HOH
281
A
HOH
282
5
HOH
HOH
282
A
HOH
283
5
HOH
HOH
283
A
HOH
284
5
HOH
HOH
284
A
HOH
285
5
HOH
HOH
285
A
HOH
286
5
HOH
HOH
286
A
HOH
287
5
HOH
HOH
287
A
HOH
288
5
HOH
HOH
288
A
HOH
289
5
HOH
HOH
289
A
HOH
290
5
HOH
HOH
290
A
HOH
291
5
HOH
HOH
291
A
HOH
292
5
HOH
HOH
292
A
HOH
293
5
HOH
HOH
293
A
HOH
294
5
HOH
HOH
294
A
HOH
295
5
HOH
HOH
295
A
HOH
296
5
HOH
HOH
296
A
HOH
297
5
HOH
HOH
297
A
HOH
298
5
HOH
HOH
298
A
HOH
299
5
HOH
HOH
299
A
HOH
300
5
HOH
HOH
300
A
HOH
301
5
HOH
HOH
301
A
HOH
302
5
HOH
HOH
302
A
HOH
303
5
HOH
HOH
303
A
HOH
304
5
HOH
HOH
304
A
HOH
305
5
HOH
HOH
305
A
HOH
306
5
HOH
HOH
306
A
HOH
307
5
HOH
HOH
307
A
HOH
308
5
HOH
HOH
308
A
HOH
309
5
HOH
HOH
309
A
HOH
310
5
HOH
HOH
310
A
HOH
311
5
HOH
HOH
311
A
HOH
312
5
HOH
HOH
312
A
HOH
313
5
HOH
HOH
313
A
HOH
314
5
HOH
HOH
314
A
HOH
315
5
HOH
HOH
315
A
HOH
316
5
HOH
HOH
316
A
HOH
317
5
HOH
HOH
317
A
HOH
318
5
HOH
HOH
318
A
HOH
319
5
HOH
HOH
319
A
HOH
320
5
HOH
HOH
320
A
HOH
321
5
HOH
HOH
321
A
HOH
322
5
HOH
HOH
322
A
HOH
323
5
HOH
HOH
323
A
HOH
324
5
HOH
HOH
324
A
HOH
325
5
HOH
HOH
325
A
HOH
326
5
HOH
HOH
326
A
HOH
327
5
HOH
HOH
327
A
HOH
328
5
HOH
HOH
328
A
HOH
329
5
HOH
HOH
329
A
HOH
330
5
HOH
HOH
330
A
HOH
331
5
HOH
HOH
331
A
HOH
332
5
HOH
HOH
332
A
HOH
333
5
HOH
HOH
333
A
HOH
334
5
HOH
HOH
334
A
HOH
335
5
HOH
HOH
335
A
Phaser MODE: MR_AUTO
THR
1
n
1
THR
1
A
LEU
2
n
2
LEU
2
A
SER
3
n
3
SER
3
A
ILE
4
n
4
ILE
4
A
LEU
5
n
5
LEU
5
A
VAL
6
n
6
VAL
6
A
ALA
7
n
7
ALA
7
A
HIS
8
n
8
HIS
8
A
ASP
9
n
9
ASP
9
A
LEU
10
n
10
LEU
10
A
GLN
11
n
11
GLN
11
A
ARG
12
n
12
ARG
12
A
VAL
13
n
13
VAL
13
A
ILE
14
n
14
ILE
14
A
GLY
15
n
15
GLY
15
A
PHE
16
n
16
PHE
16
A
GLU
17
n
17
GLU
17
A
ASN
18
n
18
ASN
18
A
GLN
19
n
19
GLN
19
A
LEU
20
n
20
LEU
20
A
PRO
21
n
21
PRO
21
A
TRP
22
n
22
TRP
22
A
HIS
23
n
23
HIS
23
A
LEU
24
n
24
LEU
24
A
PRO
25
n
25
PRO
25
A
ASN
26
n
26
ASN
26
A
ASP
27
n
27
ASP
27
A
LEU
28
n
28
LEU
28
A
LYS
29
n
29
LYS
29
A
HIS
30
n
30
HIS
30
A
VAL
31
n
31
VAL
31
A
LYS
32
n
32
LYS
32
A
LYS
33
n
33
LYS
33
A
LEU
34
n
34
LEU
34
A
SER
35
n
35
SER
35
A
THR
36
n
36
THR
36
A
GLY
37
n
37
GLY
37
A
HIS
38
n
38
HIS
38
A
THR
39
n
39
THR
39
A
LEU
40
n
40
LEU
40
A
VAL
41
n
41
VAL
41
A
MET
42
n
42
MET
42
A
GLY
43
n
43
GLY
43
A
ARG
44
n
44
ARG
44
A
LYS
45
n
45
LYS
45
A
THR
46
n
46
THR
46
A
PHE
47
n
47
PHE
47
A
GLU
48
n
48
GLU
48
A
SER
49
n
49
SER
49
A
ILE
50
n
50
ILE
50
A
GLY
51
n
51
GLY
51
A
LYS
52
n
52
LYS
52
A
PRO
53
n
53
PRO
53
A
LEU
54
n
54
LEU
54
A
PRO
55
n
55
PRO
55
A
ASN
56
n
56
ASN
56
A
ARG
57
n
57
ARG
57
A
ARG
58
n
58
ARG
58
A
ASN
59
n
59
ASN
59
A
VAL
60
n
60
VAL
60
A
VAL
61
n
61
VAL
61
A
LEU
62
n
62
LEU
62
A
THR
63
n
63
THR
63
A
SER
64
n
64
SER
64
A
ASP
65
n
65
ASP
65
A
THR
66
n
66
THR
66
A
SER
67
n
67
SER
67
A
PHE
68
n
68
PHE
68
A
ASN
69
n
69
ASN
69
A
VAL
70
n
70
VAL
70
A
GLU
71
n
71
GLU
71
A
GLY
72
n
72
GLY
72
A
VAL
73
n
73
VAL
73
A
ASP
74
n
74
ASP
74
A
VAL
75
n
75
VAL
75
A
ILE
76
n
76
ILE
76
A
HIS
77
n
77
HIS
77
A
SER
78
n
78
SER
78
A
ILE
79
n
79
ILE
79
A
GLU
80
n
80
GLU
80
A
ASP
81
n
81
ASP
81
A
ILE
82
n
82
ILE
82
A
TYR
83
n
83
TYR
83
A
GLN
84
n
84
GLN
84
A
LEU
85
n
85
LEU
85
A
PRO
86
n
86
PRO
86
A
GLY
87
n
87
GLY
87
A
HIS
88
n
88
HIS
88
A
VAL
89
n
89
VAL
89
A
PHE
90
n
90
PHE
90
A
ILE
91
n
91
ILE
91
A
PHE
92
n
92
PHE
92
A
GLY
93
n
93
GLY
93
A
GLY
94
n
94
GLY
94
A
GLN
95
n
95
GLN
95
A
THR
96
n
96
THR
96
A
LEU
97
n
97
LEU
97
A
PHE
98
n
98
PHE
98
A
GLU
99
n
99
GLU
99
A
GLU
100
n
100
GLU
100
A
MET
101
n
101
MET
101
A
ILE
102
n
102
ILE
102
A
ASP
103
n
103
ASP
103
A
LYS
104
n
104
LYS
104
A
VAL
105
n
105
VAL
105
A
ASP
106
n
106
ASP
106
A
ASP
107
n
107
ASP
107
A
MET
108
n
108
MET
108
A
TYR
109
n
109
TYR
109
A
ILE
110
n
110
ILE
110
A
THR
111
n
111
THR
111
A
VAL
112
n
112
VAL
112
A
ILE
113
n
113
ILE
113
A
GLU
114
n
114
GLU
114
A
GLY
115
n
115
GLY
115
A
LYS
116
n
116
LYS
116
A
PHE
117
n
117
PHE
117
A
ARG
118
n
118
ARG
118
A
GLY
119
n
119
GLY
119
A
ASP
120
n
120
ASP
120
A
THR
121
n
121
THR
121
A
PHE
122
n
122
PHE
122
A
PHE
123
n
123
PHE
123
A
PRO
124
n
124
PRO
124
A
PRO
125
n
125
PRO
125
A
TYR
126
n
126
TYR
126
A
THR
127
n
127
THR
127
A
PHE
128
n
128
PHE
128
A
GLU
129
n
129
GLU
129
A
ASP
130
n
130
ASP
130
A
TRP
131
n
131
TRP
131
A
GLU
132
n
132
GLU
132
A
VAL
133
n
133
VAL
133
A
ALA
134
n
134
ALA
134
A
SER
135
n
135
SER
135
A
SER
136
n
136
SER
136
A
VAL
137
n
137
VAL
137
A
GLU
138
n
138
GLU
138
A
GLY
139
n
139
GLY
139
A
LYS
140
n
140
LYS
140
A
LEU
141
n
141
LEU
141
A
ASP
142
n
142
ASP
142
A
GLU
143
n
143
GLU
143
A
LYS
144
n
144
LYS
144
A
ASN
145
n
145
ASN
145
A
THR
146
n
146
THR
146
A
ILE
147
n
147
ILE
147
A
PRO
148
n
148
PRO
148
A
HIS
149
n
149
HIS
149
A
THR
150
n
150
THR
150
A
PHE
151
n
151
PHE
151
A
LEU
152
n
152
LEU
152
A
HIS
153
n
153
HIS
153
A
LEU
154
n
154
LEU
154
A
ILE
155
n
155
ILE
155
A
ARG
156
n
156
ARG
156
A
LYS
157
n
157
LYS
157
A
ALA
158
n
158
ALA
158
A
VAL
159
n
159
VAL
159
A
PRO
160
n
160
PRO
160
A
ARG
161
n
161
ARG
161
A
0.5214
0.1513
-0.0137
0.0704
0.0175
0.9081
0.0159
-0.0062
0.1132
0.0576
0.0121
0.1276
-0.2665
0.0113
-0.0532
0.1381
-0.0067
0.0580
0.0423
-0.0062
0.1017
refined
-4.2230
30.7603
-5.2561
X-RAY DIFFRACTION
0.7974
0.2745
-0.1377
0.2204
-0.0743
0.4894
0.1755
-0.2646
0.2991
0.2792
-0.1118
-0.0773
-0.2507
0.1558
-0.0816
0.2450
-0.0780
0.0261
0.0743
-0.0327
0.1379
refined
6.6237
36.3779
5.1710
X-RAY DIFFRACTION
0.6558
0.1083
-0.2250
0.4250
-0.1975
0.5373
0.0011
-0.0401
-0.0667
0.0139
0.0432
-0.0821
-0.1169
0.0096
-0.0202
0.0666
0.0014
0.0225
0.0232
0.0086
0.0509
refined
-3.9032
19.0472
-3.6097
X-RAY DIFFRACTION
A
1
A
56
X-RAY DIFFRACTION
1
(chain A and resid 1:56)
A
57
A
89
X-RAY DIFFRACTION
2
(chain A and resid 57:89)
A
90
A
161
X-RAY DIFFRACTION
3
(chain A and resid 90:161)
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ASP
74
A
O
ASP
74
A
N
ASN
59
A
N
ASN
59
A
O
VAL
60
A
O
VAL
60
A
N
LEU
40
A
N
LEU
40
A
N
VAL
41
A
N
VAL
41
A
O
PHE
92
A
O
PHE
92
A
O
ILE
91
A
O
ILE
91
A
N
SER
3
A
N
SER
3
A
N
ILE
4
A
N
ILE
4
A
O
TYR
109
A
O
TYR
109
A
N
ILE
110
A
N
ILE
110
A
O
LEU
152
A
O
LEU
152
A
O
ILE
155
A
O
ILE
155
A
N
GLU
132
A
N
GLU
132
A
N
ILE
14
A
N
ILE
14
A
O
THR
121
A
O
THR
121
1
A
CG
GLU
71
A
CG
GLU
71
1
Y
1
A
CD
GLU
71
A
CD
GLU
71
1
Y
1
A
OE1
GLU
71
A
OE1
GLU
71
1
Y
1
A
OE2
GLU
71
A
OE2
GLU
71
1
Y
1
A
CG
GLU
143
A
CG
GLU
143
1
Y
1
A
CD
GLU
143
A
CD
GLU
143
1
Y
1
A
OE1
GLU
143
A
OE1
GLU
143
1
Y
1
A
OE2
GLU
143
A
OE2
GLU
143
1
Y
1
A
CG
LYS
144
A
CG
LYS
144
1
Y
1
A
CD
LYS
144
A
CD
LYS
144
1
Y
1
A
CE
LYS
144
A
CE
LYS
144
1
Y
1
A
NZ
LYS
144
A
NZ
LYS
144
1
Y
1
A
C20
RAR
200
WRONG HAND
B
1
A
A
OD1
HG1
ASP
THR
27
111
1.51
1
A
A
HH21
HH21
ARG
ARG
118
118
0.95
1_555
11_554
1
A
A
H
H12
TYR
GOL
126
202
1.05
1_555
5_554
1
A
A
HD3
H11
ARG
GOL
12
202
1.33
1_555
5_554
1
A
HIS
38
-118.00
-151.12
1
A
ASN
56
72.29
31.27
1
A
ASP
142
-164.00
-160.36
57.30
19.978
4.13
-0.782
0.000
0.000
-0.782
-0.000
1.563
0.213
0.175
0.179
2.014
31.849
1366
13579
10.060
98.410
1.00
0.45
0.210
1
0.01
MOLECULAR REPLACEMENT
0.900
1.110
ML
FLAT BULK SOLVENT MODEL
38.685
0.359
2.014
31.849
171
1551
90
0
1290
0.005
1443
1.034
1972
0.081
218
0.007
240
28.591
592
0.291
0.189
2.086
132
1163
1295
10
96.000
0.191
0.166
2.170
129
1152
1281
10
97.000
0.225
0.159
2.268
133
1194
1327
10
97.000
0.223
0.166
2.388
132
1181
1313
10
98.000
0.211
0.165
2.537
135
1199
1334
10
98.000
0.197
0.178
2.733
136
1224
1360
10
99.000
0.226
0.176
3.008
136
1221
1357
10
99.000
0.207
0.173
3.443
139
1253
1392
10
100.000
0.186
0.155
4.336
142
1268
1410
10
100.000
0.203
0.179
31.853
152
1358
1510
10
99.000
2.014
42.398
3M08
13728
13728
0.037
1
23.700
5.100
99.500
0.118
2.014
2.12
5.8
9793
1918
0.118
5.10
98.70
0.088
2.12
2.25
7.7
9585
1840
0.088
5.20
98.90
0.069
2.25
2.41
9.8
9033
1737
0.069
5.20
99.30
0.061
2.41
2.60
9.8
8367
1614
0.061
5.20
99.60
0.053
2.60
2.85
10.6
7925
1532
0.053
5.20
99.80
0.038
2.85
3.18
14.4
7182
1391
0.038
5.20
100.00
0.027
3.18
3.68
19.0
6269
1231
0.027
5.10
100.00
0.022
3.68
4.50
24.1
5398
1073
0.022
5.00
100.00
0.021
4.50
6.37
22.3
4215
863
0.021
4.90
100.00
0.022
6.37
42.40
13.2
2253
529
0.022
4.30
99.60
data reduction
Andrew G.W. Leslie
andrew@mrc-lmb.cam.ac.uk
http://www.mrc-lmb.cam.ac.uk/harry/mosflm/
MOSFLM
package
data scaling
Phil R. Evans
pre@mrc-lmb.cam.ac.uk
2009/03/31
Fortran_77
http://www.ccp4.ac.uk/dist/html/scala.html
SCALA
other
3.3.15
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
Thu Nov 22 16:35:27 2007
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
2.1.1
refinement
Paul D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
1.5_2
data extraction
PDB
help@deposit.rcsb.org
June 11, 2008
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.005
N
Wild Type Dihydrofolate Reductase from Staphylococcus aureus with inhibitor RAB1
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
A
LEU
24
A
LEU
24
HELX_P
A
THR
36
A
THR
36
1
1
13
A
ARG
44
A
ARG
44
HELX_P
A
GLY
51
A
GLY
51
1
2
8
A
SER
78
A
SER
78
HELX_P
A
LEU
85
A
LEU
85
5
3
8
A
GLY
94
A
GLY
94
HELX_P
A
ILE
102
A
ILE
102
1
4
9
Oxidoreductase/Oxidoreductase inhibitor
folate, dhfr, antimicrobial, antibiotic resistance, NADP, One-carbon metabolism, Oxidoreductase', Oxidoreductase-Oxidoreductase inhibitor complex
A
GLY
93
A
GLY
93
1
A
GLY
94
A
GLY
94
-0.11
DYR_STAAU
UNP
1
2
P0A017
TLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIE
DIYQLPGHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRK
2
158
3M08
1
157
P0A017
A
1
1
157
1
expression tag
ALA
158
3M08
A
P0A017
UNP
158
1
expression tag
VAL
159
3M08
A
P0A017
UNP
159
1
expression tag
PRO
160
3M08
A
P0A017
UNP
160
1
expression tag
ARG
161
3M08
A
P0A017
UNP
161
8
2
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
73
A
VAL
73
A
ILE
76
A
ILE
76
A
ARG
58
A
ARG
58
A
LEU
62
A
LEU
62
A
THR
39
A
THR
39
A
GLY
43
A
GLY
43
A
VAL
89
A
VAL
89
A
GLY
93
A
GLY
93
A
LEU
2
A
LEU
2
A
ASP
9
A
ASP
9
A
ASP
107
A
ASP
107
A
ILE
113
A
ILE
113
A
HIS
149
A
HIS
149
A
ARG
156
A
ARG
156
A
TRP
131
A
TRP
131
A
GLU
138
A
GLU
138
A
VAL
13
A
VAL
13
A
GLY
15
A
GLY
15
A
THR
121
A
THR
121
A
PHE
122
A
PHE
122
BINDING SITE FOR RESIDUE RAR A 200
A
RAR
200
Software
20
BINDING SITE FOR RESIDUE NAP A 201
A
NAP
201
Software
33
BINDING SITE FOR RESIDUE GOL A 202
A
GOL
202
Software
5
A
LEU
5
A
LEU
5
20
1_555
A
VAL
6
A
VAL
6
20
1_555
A
ALA
7
A
ALA
7
20
1_555
A
LEU
20
A
LEU
20
20
1_555
A
ASP
27
A
ASP
27
20
1_555
A
LEU
28
A
LEU
28
20
1_555
A
LYS
29
A
LYS
29
20
1_555
A
VAL
31
A
VAL
31
20
1_555
A
LYS
32
A
LYS
32
20
1_555
A
SER
49
A
SER
49
20
1_555
A
ILE
50
A
ILE
50
20
1_555
A
LYS
52
A
LYS
52
20
1_555
A
LEU
54
A
LEU
54
20
1_555
A
PRO
55
A
PRO
55
20
1_555
A
ARG
57
A
ARG
57
20
1_555
A
PHE
92
A
PHE
92
20
1_555
A
THR
111
A
THR
111
20
1_555
A
NAP
201
C
NAP
20
1_555
A
HOH
206
E
HOH
20
1_555
A
HOH
319
E
HOH
20
1_555
A
VAL
6
A
VAL
6
33
1_555
A
ALA
7
A
ALA
7
33
1_555
A
ILE
14
A
ILE
14
33
1_555
A
GLY
15
A
GLY
15
33
1_555
A
ASN
18
A
ASN
18
33
1_555
A
GLN
19
A
GLN
19
33
1_555
A
LEU
20
A
LEU
20
33
1_555
A
TRP
22
A
TRP
22
33
1_555
A
GLY
43
A
GLY
43
33
1_555
A
ARG
44
A
ARG
44
33
1_555
A
LYS
45
A
LYS
45
33
1_555
A
THR
46
A
THR
46
33
1_555
A
LEU
62
A
LEU
62
33
1_555
A
THR
63
A
THR
63
33
1_555
A
SER
64
A
SER
64
33
1_555
A
HIS
77
A
HIS
77
33
1_555
A
ILE
79
A
ILE
79
33
1_555
A
PHE
92
A
PHE
92
33
1_555
A
GLY
93
A
GLY
93
33
1_555
A
GLY
94
A
GLY
94
33
1_555
A
GLN
95
A
GLN
95
33
1_555
A
THR
96
A
THR
96
33
1_555
A
GLU
100
A
GLU
100
33
1_555
A
THR
121
A
THR
121
33
1_555
A
HOH
164
E
HOH
33
1_555
A
HOH
172
E
HOH
33
1_555
A
HOH
194
E
HOH
33
1_555
A
RAR
200
B
RAR
33
1_555
A
HOH
208
E
HOH
33
1_555
A
HOH
210
E
HOH
33
1_555
A
HOH
241
E
HOH
33
1_555
A
HOH
244
E
HOH
33
1_555
A
HOH
317
E
HOH
33
1_555
A
ARG
12
A
ARG
12
5
6_555
A
PRO
125
A
PRO
125
5
6_555
A
TYR
126
A
TYR
126
5
6_555
A
PHE
128
A
PHE
128
5
6_555
A
GLU
132
A
GLU
132
5
1_555
178
P 61 2 2