0.022522
0.000000
0.000000
0.000000
0.019354
0.000000
0.000000
0.000000
0.007582
0.00000
0.00000
0.00000
Rochel, N.
Hourai, S.
Moras, D.
Structural Proteomics in Europe (SPINE)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90
90
90
44.402
51.67
131.888
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
C27 H44 O3
416.636
5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL
1,25 DIHYDROXY VITAMIN D3
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
O
N
392
N
O
N
393
S
C
N
394
N
C
N
395
R
C
N
396
N
C
N
397
N
C
N
398
N
C
N
399
N
C
N
400
N
C
N
401
N
C
N
402
N
C
N
403
N
C
N
404
N
C
N
405
R
C
N
406
S
C
N
407
N
C
N
408
N
C
N
409
R
C
N
410
N
C
N
411
N
C
N
412
R
C
N
413
N
C
N
414
N
C
N
415
N
C
N
416
N
C
N
417
N
C
N
418
N
C
N
419
N
C
N
420
N
O
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
Z
doub
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
E
doub
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
doub
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
UK
J.Steroid Biochem.Mol.Biol.
JSBBEZ
2046
0960-0760
121
84
87
10.1016/j.jsbmb.2010.04.008
20403435
Crystal structure of hereditary vitamin D-resistant rickets--associated mutant H305Q of vitamin D nuclear receptor bound to its natural ligand
2010
10.2210/pdb3m7r/pdb
pdb_00003m7r
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
CCD
MAR CCD 165 mm
Si 111 CHANNEL
SINGLE WAVELENGTH
M
x-ray
1
1.0
BM30A
ESRF
SYNCHROTRON
ESRF BEAMLINE BM30A
28736.244
Vitamin D3 receptor
VDR, UNP residues 120-423
H305Q
1
man
polymer
416.636
5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL
1
syn
non-polymer
18.015
water
164
nat
water
VDR, 1,25-dihydroxyvitamin D3 receptor, Nuclear receptor subfamily 1 group I member 1
no
no
LRPKLSEEQQRIIAILLDAHHKTYDPTYSDFCQFRPPVRVNDGGGSVTLELSQLSMLPHLADLVSYSIQKVIGFAKMIPG
FRDLTSEDQIVLLKSSAIEVIMLRSNESFTMDDMSWTCGNQDYKYRVSDVTKAGQSLELIEPLIKFQVGLKKLNLHEEEH
VLLMAICIVSPDRPGVQDAALIEAIQDRLSNTLQTYIRCRHPPPGSHLLYAKMIQKLADLRSLNEEHSKQYRCLSFQPEC
SMKLTPLVLEVFG
LRPKLSEEQQRIIAILLDAHHKTYDPTYSDFCQFRPPVRVNDGGGSVTLELSQLSMLPHLADLVSYSIQKVIGFAKMIPG
FRDLTSEDQIVLLKSSAIEVIMLRSNESFTMDDMSWTCGNQDYKYRVSDVTKAGQSLELIEPLIKFQVGLKKLNLHEEEH
VLLMAICIVSPDRPGVQDAALIEAIQDRLSNTLQTYIRCRHPPPGSHLLYAKMIQKLADLRSLNEEHSKQYRCLSFQPEC
SMKLTPLVLEVFG
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
NR1I1, VDR
9606
Homo sapiens
562
Escherichia coli
BL21
plasmid
pET28
1
2.63
53.27
VAPOR DIFFUSION, HANGING DROP
6.5
NH4Sulfate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
Structural Proteomics in Europe
SPINE
exptl_crystal_grow
pdbx_unobs_or_zero_occ_residues
database_2
pdbx_unobs_or_zero_occ_residues
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Database references
Advisory
Experimental preparation
Advisory
Database references
Derived calculations
Data collection
Refinement description
1
0
2010-05-05
1
1
2011-07-13
1
2
2014-02-19
1
3
2018-02-07
1
4
2021-11-10
1
5
2023-11-01
_exptl_crystal_grow.pdbx_details
_exptl_crystal_grow.temp
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
RCSB
Y
PDBJ
2010-03-17
REL
REL
VDX
5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL
HOH
water
1DB1
PDB ENTRY 1DB1
PDB
experimental model
VDX
425
2
VDX
VDX
425
A
TIP
1
3
HOH
HOH
1
A
TIP
2
3
HOH
HOH
2
A
TIP
3
3
HOH
HOH
3
A
TIP
4
3
HOH
HOH
4
A
TIP
5
3
HOH
HOH
5
A
TIP
6
3
HOH
HOH
6
A
TIP
7
3
HOH
HOH
7
A
TIP
8
3
HOH
HOH
8
A
TIP
9
3
HOH
HOH
9
A
TIP
10
3
HOH
HOH
10
A
TIP
11
3
HOH
HOH
11
A
TIP
12
3
HOH
HOH
12
A
TIP
13
3
HOH
HOH
13
A
TIP
14
3
HOH
HOH
14
A
TIP
15
3
HOH
HOH
15
A
TIP
16
3
HOH
HOH
16
A
TIP
17
3
HOH
HOH
17
A
TIP
18
3
HOH
HOH
18
A
TIP
19
3
HOH
HOH
19
A
TIP
20
3
HOH
HOH
20
A
TIP
21
3
HOH
HOH
21
A
TIP
22
3
HOH
HOH
22
A
TIP
23
3
HOH
HOH
23
A
TIP
24
3
HOH
HOH
24
A
TIP
25
3
HOH
HOH
25
A
TIP
26
3
HOH
HOH
26
A
TIP
27
3
HOH
HOH
27
A
TIP
28
3
HOH
HOH
28
A
TIP
29
3
HOH
HOH
29
A
TIP
30
3
HOH
HOH
30
A
TIP
31
3
HOH
HOH
31
A
TIP
32
3
HOH
HOH
32
A
TIP
33
3
HOH
HOH
33
A
TIP
34
3
HOH
HOH
34
A
TIP
35
3
HOH
HOH
35
A
TIP
36
3
HOH
HOH
36
A
TIP
37
3
HOH
HOH
37
A
TIP
38
3
HOH
HOH
38
A
TIP
39
3
HOH
HOH
39
A
TIP
40
3
HOH
HOH
40
A
TIP
41
3
HOH
HOH
41
A
TIP
42
3
HOH
HOH
42
A
TIP
43
3
HOH
HOH
43
A
TIP
44
3
HOH
HOH
44
A
TIP
45
3
HOH
HOH
45
A
TIP
46
3
HOH
HOH
46
A
TIP
47
3
HOH
HOH
47
A
TIP
48
3
HOH
HOH
48
A
TIP
49
3
HOH
HOH
49
A
TIP
50
3
HOH
HOH
50
A
TIP
51
3
HOH
HOH
51
A
TIP
52
3
HOH
HOH
52
A
TIP
53
3
HOH
HOH
53
A
TIP
54
3
HOH
HOH
54
A
TIP
55
3
HOH
HOH
55
A
TIP
56
3
HOH
HOH
56
A
TIP
57
3
HOH
HOH
57
A
TIP
58
3
HOH
HOH
58
A
TIP
59
3
HOH
HOH
59
A
TIP
60
3
HOH
HOH
60
A
TIP
61
3
HOH
HOH
61
A
TIP
62
3
HOH
HOH
62
A
TIP
63
3
HOH
HOH
63
A
TIP
64
3
HOH
HOH
64
A
TIP
65
3
HOH
HOH
65
A
TIP
66
3
HOH
HOH
66
A
TIP
67
3
HOH
HOH
67
A
TIP
68
3
HOH
HOH
68
A
TIP
69
3
HOH
HOH
69
A
TIP
70
3
HOH
HOH
70
A
TIP
71
3
HOH
HOH
71
A
TIP
72
3
HOH
HOH
72
A
TIP
73
3
HOH
HOH
73
A
TIP
74
3
HOH
HOH
74
A
TIP
75
3
HOH
HOH
75
A
TIP
76
3
HOH
HOH
76
A
TIP
77
3
HOH
HOH
77
A
TIP
78
3
HOH
HOH
78
A
TIP
79
3
HOH
HOH
79
A
TIP
80
3
HOH
HOH
80
A
TIP
81
3
HOH
HOH
81
A
TIP
82
3
HOH
HOH
82
A
TIP
83
3
HOH
HOH
83
A
TIP
84
3
HOH
HOH
84
A
TIP
85
3
HOH
HOH
85
A
TIP
86
3
HOH
HOH
86
A
TIP
87
3
HOH
HOH
87
A
TIP
88
3
HOH
HOH
88
A
TIP
89
3
HOH
HOH
89
A
TIP
90
3
HOH
HOH
90
A
TIP
91
3
HOH
HOH
91
A
TIP
92
3
HOH
HOH
92
A
TIP
93
3
HOH
HOH
93
A
TIP
94
3
HOH
HOH
94
A
TIP
95
3
HOH
HOH
95
A
TIP
96
3
HOH
HOH
96
A
TIP
97
3
HOH
HOH
97
A
TIP
98
3
HOH
HOH
98
A
TIP
99
3
HOH
HOH
99
A
TIP
100
3
HOH
HOH
100
A
TIP
101
3
HOH
HOH
101
A
TIP
102
3
HOH
HOH
102
A
TIP
103
3
HOH
HOH
103
A
TIP
104
3
HOH
HOH
104
A
TIP
105
3
HOH
HOH
105
A
TIP
106
3
HOH
HOH
106
A
TIP
107
3
HOH
HOH
107
A
TIP
108
3
HOH
HOH
108
A
TIP
109
3
HOH
HOH
109
A
TIP
110
3
HOH
HOH
110
A
TIP
111
3
HOH
HOH
111
A
TIP
112
3
HOH
HOH
112
A
TIP
113
3
HOH
HOH
113
A
TIP
114
3
HOH
HOH
114
A
TIP
115
3
HOH
HOH
115
A
TIP
116
3
HOH
HOH
116
A
TIP
117
3
HOH
HOH
117
A
TIP
118
3
HOH
HOH
118
A
TIP
119
3
HOH
HOH
119
A
TIP
120
3
HOH
HOH
424
A
TIP
121
3
HOH
HOH
426
A
TIP
122
3
HOH
HOH
427
A
TIP
123
3
HOH
HOH
428
A
TIP
124
3
HOH
HOH
429
A
TIP
125
3
HOH
HOH
430
A
TIP
126
3
HOH
HOH
431
A
TIP
127
3
HOH
HOH
432
A
TIP
128
3
HOH
HOH
433
A
TIP
129
3
HOH
HOH
434
A
TIP
130
3
HOH
HOH
435
A
TIP
131
3
HOH
HOH
436
A
TIP
132
3
HOH
HOH
437
A
TIP
133
3
HOH
HOH
438
A
TIP
134
3
HOH
HOH
439
A
TIP
135
3
HOH
HOH
440
A
TIP
136
3
HOH
HOH
441
A
TIP
137
3
HOH
HOH
442
A
TIP
138
3
HOH
HOH
443
A
TIP
139
3
HOH
HOH
444
A
TIP
140
3
HOH
HOH
445
A
TIP
141
3
HOH
HOH
446
A
TIP
142
3
HOH
HOH
447
A
TIP
143
3
HOH
HOH
448
A
TIP
144
3
HOH
HOH
449
A
TIP
145
3
HOH
HOH
450
A
TIP
146
3
HOH
HOH
451
A
TIP
147
3
HOH
HOH
452
A
TIP
148
3
HOH
HOH
453
A
TIP
149
3
HOH
HOH
454
A
TIP
150
3
HOH
HOH
455
A
TIP
151
3
HOH
HOH
456
A
TIP
152
3
HOH
HOH
457
A
TIP
153
3
HOH
HOH
458
A
TIP
154
3
HOH
HOH
459
A
TIP
155
3
HOH
HOH
460
A
TIP
156
3
HOH
HOH
461
A
TIP
157
3
HOH
HOH
462
A
TIP
158
3
HOH
HOH
463
A
TIP
159
3
HOH
HOH
464
A
TIP
160
3
HOH
HOH
465
A
TIP
161
3
HOH
HOH
466
A
TIP
162
3
HOH
HOH
467
A
TIP
163
3
HOH
HOH
468
A
TIP
164
3
HOH
HOH
469
A
LEU
120
n
1
LEU
120
A
ARG
121
n
2
ARG
121
A
PRO
122
n
3
PRO
122
A
LYS
123
n
4
LYS
123
A
LEU
124
n
5
LEU
124
A
SER
125
n
6
SER
125
A
GLU
126
n
7
GLU
126
A
GLU
127
n
8
GLU
127
A
GLN
128
n
9
GLN
128
A
GLN
129
n
10
GLN
129
A
ARG
130
n
11
ARG
130
A
ILE
131
n
12
ILE
131
A
ILE
132
n
13
ILE
132
A
ALA
133
n
14
ALA
133
A
ILE
134
n
15
ILE
134
A
LEU
135
n
16
LEU
135
A
LEU
136
n
17
LEU
136
A
ASP
137
n
18
ASP
137
A
ALA
138
n
19
ALA
138
A
HIS
139
n
20
HIS
139
A
HIS
140
n
21
HIS
140
A
LYS
141
n
22
LYS
141
A
THR
142
n
23
THR
142
A
TYR
143
n
24
TYR
143
A
ASP
144
n
25
ASP
144
A
PRO
145
n
26
PRO
145
A
THR
146
n
27
THR
146
A
TYR
147
n
28
TYR
147
A
SER
148
n
29
SER
148
A
ASP
149
n
30
ASP
149
A
PHE
150
n
31
PHE
150
A
CYS
151
n
32
CYS
151
A
GLN
152
n
33
GLN
152
A
PHE
153
n
34
PHE
153
A
ARG
154
n
35
ARG
154
A
PRO
155
n
36
PRO
155
A
PRO
156
n
37
PRO
156
A
VAL
157
n
38
VAL
157
A
ARG
158
n
39
ARG
158
A
VAL
159
n
40
VAL
159
A
ASN
160
n
41
ASN
160
A
ASP
161
n
42
ASP
161
A
GLY
162
n
43
GLY
162
A
GLY
163
n
44
GLY
163
A
GLY
164
n
45
GLY
164
A
SER
216
n
46
SER
216
A
VAL
217
n
47
VAL
217
A
THR
218
n
48
THR
218
A
LEU
219
n
49
LEU
219
A
GLU
220
n
50
GLU
220
A
LEU
221
n
51
LEU
221
A
SER
222
n
52
SER
222
A
GLN
223
n
53
GLN
223
A
LEU
224
n
54
LEU
224
A
SER
225
n
55
SER
225
A
MET
226
n
56
MET
226
A
LEU
227
n
57
LEU
227
A
PRO
228
n
58
PRO
228
A
HIS
229
n
59
HIS
229
A
LEU
230
n
60
LEU
230
A
ALA
231
n
61
ALA
231
A
ASP
232
n
62
ASP
232
A
LEU
233
n
63
LEU
233
A
VAL
234
n
64
VAL
234
A
SER
235
n
65
SER
235
A
TYR
236
n
66
TYR
236
A
SER
237
n
67
SER
237
A
ILE
238
n
68
ILE
238
A
GLN
239
n
69
GLN
239
A
LYS
240
n
70
LYS
240
A
VAL
241
n
71
VAL
241
A
ILE
242
n
72
ILE
242
A
GLY
243
n
73
GLY
243
A
PHE
244
n
74
PHE
244
A
ALA
245
n
75
ALA
245
A
LYS
246
n
76
LYS
246
A
MET
247
n
77
MET
247
A
ILE
248
n
78
ILE
248
A
PRO
249
n
79
PRO
249
A
GLY
250
n
80
GLY
250
A
PHE
251
n
81
PHE
251
A
ARG
252
n
82
ARG
252
A
ASP
253
n
83
ASP
253
A
LEU
254
n
84
LEU
254
A
THR
255
n
85
THR
255
A
SER
256
n
86
SER
256
A
GLU
257
n
87
GLU
257
A
ASP
258
n
88
ASP
258
A
GLN
259
n
89
GLN
259
A
ILE
260
n
90
ILE
260
A
VAL
261
n
91
VAL
261
A
LEU
262
n
92
LEU
262
A
LEU
263
n
93
LEU
263
A
LYS
264
n
94
LYS
264
A
SER
265
n
95
SER
265
A
SER
266
n
96
SER
266
A
ALA
267
n
97
ALA
267
A
ILE
268
n
98
ILE
268
A
GLU
269
n
99
GLU
269
A
VAL
270
n
100
VAL
270
A
ILE
271
n
101
ILE
271
A
MET
272
n
102
MET
272
A
LEU
273
n
103
LEU
273
A
ARG
274
n
104
ARG
274
A
SER
275
n
105
SER
275
A
ASN
276
n
106
ASN
276
A
GLU
277
n
107
GLU
277
A
SER
278
n
108
SER
278
A
PHE
279
n
109
PHE
279
A
THR
280
n
110
THR
280
A
MET
281
n
111
MET
281
A
ASP
282
n
112
ASP
282
A
ASP
283
n
113
ASP
283
A
MET
284
n
114
MET
284
A
SER
285
n
115
SER
285
A
TRP
286
n
116
TRP
286
A
THR
287
n
117
THR
287
A
CYS
288
n
118
CYS
288
A
GLY
289
n
119
GLY
289
A
ASN
290
n
120
ASN
290
A
GLN
291
n
121
GLN
291
A
ASP
292
n
122
ASP
292
A
TYR
293
n
123
TYR
293
A
LYS
294
n
124
LYS
294
A
TYR
295
n
125
TYR
295
A
ARG
296
n
126
ARG
296
A
VAL
297
n
127
VAL
297
A
SER
298
n
128
SER
298
A
ASP
299
n
129
ASP
299
A
VAL
300
n
130
VAL
300
A
THR
301
n
131
THR
301
A
LYS
302
n
132
LYS
302
A
ALA
303
n
133
ALA
303
A
GLY
304
n
134
GLY
304
A
GLN
305
n
135
GLN
305
A
SER
306
n
136
SER
306
A
LEU
307
n
137
LEU
307
A
GLU
308
n
138
GLU
308
A
LEU
309
n
139
LEU
309
A
ILE
310
n
140
ILE
310
A
GLU
311
n
141
GLU
311
A
PRO
312
n
142
PRO
312
A
LEU
313
n
143
LEU
313
A
ILE
314
n
144
ILE
314
A
LYS
315
n
145
LYS
315
A
PHE
316
n
146
PHE
316
A
GLN
317
n
147
GLN
317
A
VAL
318
n
148
VAL
318
A
GLY
319
n
149
GLY
319
A
LEU
320
n
150
LEU
320
A
LYS
321
n
151
LYS
321
A
LYS
322
n
152
LYS
322
A
LEU
323
n
153
LEU
323
A
ASN
324
n
154
ASN
324
A
LEU
325
n
155
LEU
325
A
HIS
326
n
156
HIS
326
A
GLU
327
n
157
GLU
327
A
GLU
328
n
158
GLU
328
A
GLU
329
n
159
GLU
329
A
HIS
330
n
160
HIS
330
A
VAL
331
n
161
VAL
331
A
LEU
332
n
162
LEU
332
A
LEU
333
n
163
LEU
333
A
MET
334
n
164
MET
334
A
ALA
335
n
165
ALA
335
A
ILE
336
n
166
ILE
336
A
CYS
337
n
167
CYS
337
A
ILE
338
n
168
ILE
338
A
VAL
339
n
169
VAL
339
A
SER
340
n
170
SER
340
A
PRO
341
n
171
PRO
341
A
ASP
342
n
172
ASP
342
A
ARG
343
n
173
ARG
343
A
PRO
344
n
174
PRO
344
A
GLY
345
n
175
GLY
345
A
VAL
346
n
176
VAL
346
A
GLN
347
n
177
GLN
347
A
ASP
348
n
178
ASP
348
A
ALA
349
n
179
ALA
349
A
ALA
350
n
180
ALA
350
A
LEU
351
n
181
LEU
351
A
ILE
352
n
182
ILE
352
A
GLU
353
n
183
GLU
353
A
ALA
354
n
184
ALA
354
A
ILE
355
n
185
ILE
355
A
GLN
356
n
186
GLN
356
A
ASP
357
n
187
ASP
357
A
ARG
358
n
188
ARG
358
A
LEU
359
n
189
LEU
359
A
SER
360
n
190
SER
360
A
ASN
361
n
191
ASN
361
A
THR
362
n
192
THR
362
A
LEU
363
n
193
LEU
363
A
GLN
364
n
194
GLN
364
A
THR
365
n
195
THR
365
A
TYR
366
n
196
TYR
366
A
ILE
367
n
197
ILE
367
A
ARG
368
n
198
ARG
368
A
CYS
369
n
199
CYS
369
A
ARG
370
n
200
ARG
370
A
HIS
371
n
201
HIS
371
A
PRO
372
n
202
PRO
372
A
PRO
373
n
203
PRO
373
A
PRO
374
n
204
PRO
374
A
GLY
375
n
205
GLY
375
A
SER
376
n
206
SER
376
A
HIS
377
n
207
HIS
377
A
LEU
378
n
208
LEU
378
A
LEU
379
n
209
LEU
379
A
TYR
380
n
210
TYR
380
A
ALA
381
n
211
ALA
381
A
LYS
382
n
212
LYS
382
A
MET
383
n
213
MET
383
A
ILE
384
n
214
ILE
384
A
GLN
385
n
215
GLN
385
A
LYS
386
n
216
LYS
386
A
LEU
387
n
217
LEU
387
A
ALA
388
n
218
ALA
388
A
ASP
389
n
219
ASP
389
A
LEU
390
n
220
LEU
390
A
ARG
391
n
221
ARG
391
A
SER
392
n
222
SER
392
A
LEU
393
n
223
LEU
393
A
ASN
394
n
224
ASN
394
A
GLU
395
n
225
GLU
395
A
GLU
396
n
226
GLU
396
A
HIS
397
n
227
HIS
397
A
SER
398
n
228
SER
398
A
LYS
399
n
229
LYS
399
A
GLN
400
n
230
GLN
400
A
TYR
401
n
231
TYR
401
A
ARG
402
n
232
ARG
402
A
CYS
403
n
233
CYS
403
A
LEU
404
n
234
LEU
404
A
SER
405
n
235
SER
405
A
PHE
406
n
236
PHE
406
A
GLN
407
n
237
GLN
407
A
PRO
408
n
238
PRO
408
A
GLU
409
n
239
GLU
409
A
CYS
410
n
240
CYS
410
A
SER
411
n
241
SER
411
A
MET
412
n
242
MET
412
A
LYS
413
n
243
LYS
413
A
LEU
414
n
244
LEU
414
A
THR
415
n
245
THR
415
A
PRO
416
n
246
PRO
416
A
LEU
417
n
247
LEU
417
A
VAL
418
n
248
VAL
418
A
LEU
419
n
249
LEU
419
A
GLU
420
n
250
GLU
420
A
VAL
421
n
251
VAL
421
A
PHE
422
n
252
PHE
422
A
GLY
423
n
253
GLY
423
A
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
THR
280
A
N
THR
110
A
O
SER
285
A
O
SER
115
A
N
TRP
286
A
N
TRP
116
A
O
TYR
295
A
O
TYR
125
1
A
GLY
375
A
GLY
205
0
Y
1
A
SER
376
A
SER
206
0
Y
1
A
HIS
377
A
HIS
207
0
Y
1
A
ASN
290
-65.45
-178.53
1
A
ASP
342
-96.63
51.16
1
A
LEU
378
68.80
-30.39
1
A
LEU
414
-101.16
-152.00
2.12
0
0
-0.712
0
-1.412
0.241
0.211
0.241
1.8
20
2803
28029
28029
96.9
random
1
isotropic
THROUGHOUT
0
0
MOLECULAR REPLACEMENT
PDB ENTRY 1DB1
Engh & Huber
1.8
20
164
2205
30
0
2011
0.004
1.05
1.8
20
3M7R
28029
28029
1
96.9
refinement
CNS
data reduction
HKL-2000
data scaling
HKL-2000
phasing
CNS
Crystal structure of VDR H305Q mutant
1
N
N
2
N
N
3
N
N
A
SER
125
A
SER
6
HELX_P
A
TYR
143
A
TYR
24
1
1
19
A
ASP
149
A
ASP
30
HELX_P
A
PHE
153
A
PHE
34
5
2
5
A
SER
216
A
SER
46
HELX_P
A
LEU
224
A
LEU
54
1
3
9
A
MET
226
A
MET
56
HELX_P
A
MET
247
A
MET
77
1
4
22
A
GLY
250
A
GLY
80
HELX_P
A
LEU
254
A
LEU
84
5
5
5
A
THR
255
A
THR
85
HELX_P
A
SER
275
A
SER
105
1
6
21
A
ASN
290
A
ASN
120
HELX_P
A
ASP
292
A
ASP
122
5
7
3
A
ARG
296
A
ARG
126
HELX_P
A
LYS
302
A
LYS
132
1
8
7
A
SER
306
A
SER
136
HELX_P
A
LEU
323
A
LEU
153
1
9
18
A
HIS
326
A
HIS
156
HELX_P
A
VAL
339
A
VAL
169
1
10
14
A
ASP
348
A
ASP
178
HELX_P
A
HIS
371
A
HIS
201
1
11
24
A
LEU
378
A
LEU
208
HELX_P
A
PHE
406
A
PHE
236
1
12
29
A
GLU
409
A
GLU
239
HELX_P
A
LEU
414
A
LEU
244
1
13
6
A
THR
415
A
THR
245
HELX_P
A
GLY
423
A
GLY
253
1
14
9
TRANSCRIPTION
Ligand binding domain, TRANSCRIPTION, Structural Genomics, SPINE, Structural Proteomics in Europe
A
PRO
373
A
PRO
203
1
A
PRO
374
A
PRO
204
-0.06
VDR_HUMAN
UNP
1
120
P11473
LRPKLSEEQQRIIAILLDAHHKTYDPTYSDFCQFRPPVRVNDGGGSHPSRPNSRHTPSFSGDSSSSCSDHCITSSDMMDS
SSFSNLDLSEEDSDDPSVTLELSQLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSEDQIVLLKSSAIEVIMLRSNESF
TMDDMSWTCGNQDYKYRVSDVTKAGHSLELIEPLIKFQVGLKKLNLHEEEHVLLMAICIVSPDRPGVQDAALIEAIQDRL
SNTLQTYIRCRHPPPGSHLLYAKMIQKLADLRSLNEEHSKQYRCLSFQPECSMKLTPLVLEVFG
120
423
3M7R
120
423
P11473
A
1
1
253
1
SER
deletion
3M7R
A
P11473
UNP
165
1
HIS
deletion
3M7R
A
P11473
UNP
166
1
PRO
deletion
3M7R
A
P11473
UNP
167
1
SER
deletion
3M7R
A
P11473
UNP
168
1
ARG
deletion
3M7R
A
P11473
UNP
169
1
PRO
deletion
3M7R
A
P11473
UNP
170
1
ASN
deletion
3M7R
A
P11473
UNP
171
1
SER
deletion
3M7R
A
P11473
UNP
172
1
ARG
deletion
3M7R
A
P11473
UNP
173
1
HIS
deletion
3M7R
A
P11473
UNP
174
1
THR
deletion
3M7R
A
P11473
UNP
175
1
PRO
deletion
3M7R
A
P11473
UNP
176
1
SER
deletion
3M7R
A
P11473
UNP
177
1
PHE
deletion
3M7R
A
P11473
UNP
178
1
SER
deletion
3M7R
A
P11473
UNP
179
1
GLY
deletion
3M7R
A
P11473
UNP
180
1
ASP
deletion
3M7R
A
P11473
UNP
181
1
SER
deletion
3M7R
A
P11473
UNP
182
1
SER
deletion
3M7R
A
P11473
UNP
183
1
SER
deletion
3M7R
A
P11473
UNP
184
1
SER
deletion
3M7R
A
P11473
UNP
185
1
CYS
deletion
3M7R
A
P11473
UNP
186
1
SER
deletion
3M7R
A
P11473
UNP
187
1
ASP
deletion
3M7R
A
P11473
UNP
188
1
HIS
deletion
3M7R
A
P11473
UNP
189
1
CYS
deletion
3M7R
A
P11473
UNP
190
1
ILE
deletion
3M7R
A
P11473
UNP
191
1
THR
deletion
3M7R
A
P11473
UNP
192
1
SER
deletion
3M7R
A
P11473
UNP
193
1
SER
deletion
3M7R
A
P11473
UNP
194
1
ASP
deletion
3M7R
A
P11473
UNP
195
1
MET
deletion
3M7R
A
P11473
UNP
196
1
MET
deletion
3M7R
A
P11473
UNP
197
1
ASP
deletion
3M7R
A
P11473
UNP
198
1
SER
deletion
3M7R
A
P11473
UNP
199
1
SER
deletion
3M7R
A
P11473
UNP
200
1
SER
deletion
3M7R
A
P11473
UNP
201
1
PHE
deletion
3M7R
A
P11473
UNP
202
1
SER
deletion
3M7R
A
P11473
UNP
203
1
ASN
deletion
3M7R
A
P11473
UNP
204
1
LEU
deletion
3M7R
A
P11473
UNP
205
1
ASP
deletion
3M7R
A
P11473
UNP
206
1
LEU
deletion
3M7R
A
P11473
UNP
207
1
SER
deletion
3M7R
A
P11473
UNP
208
1
GLU
deletion
3M7R
A
P11473
UNP
209
1
GLU
deletion
3M7R
A
P11473
UNP
210
1
ASP
deletion
3M7R
A
P11473
UNP
211
1
SER
deletion
3M7R
A
P11473
UNP
212
1
ASP
deletion
3M7R
A
P11473
UNP
213
1
ASP
deletion
3M7R
A
P11473
UNP
214
1
PRO
deletion
3M7R
A
P11473
UNP
215
1
HIS
engineered mutation
GLN
305
3M7R
A
P11473
UNP
305
135
3
anti-parallel
anti-parallel
A
PHE
279
A
PHE
109
A
THR
280
A
THR
110
A
SER
285
A
SER
115
A
THR
287
A
THR
117
A
LYS
294
A
LYS
124
A
TYR
295
A
TYR
125
BINDING SITE FOR RESIDUE VDX A 425
A
VDX
425
Software
13
A
TYR
143
A
TYR
24
13
1_555
A
LEU
227
A
LEU
57
13
1_555
A
LEU
233
A
LEU
63
13
1_555
A
VAL
234
A
VAL
64
13
1_555
A
SER
237
A
SER
67
13
1_555
A
ARG
274
A
ARG
104
13
1_555
A
SER
275
A
SER
105
13
1_555
A
SER
278
A
SER
108
13
1_555
A
TRP
286
A
TRP
116
13
1_555
A
CYS
288
A
CYS
118
13
1_555
A
GLN
305
A
GLN
135
13
1_555
A
LEU
309
A
LEU
139
13
1_555
A
HIS
397
A
HIS
227
13
1_555
19
P 21 21 21