0.004989 0.000000 0.000000 0.000000 0.004989 0.000000 0.000000 0.000000 0.004989 0.00000 0.00000 0.00000 Schumacher, M.A. Piro, K. Xu, W. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 48 90.00 90.00 90.00 200.460 200.460 200.460 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N O N 89 N P N 90 N O N 91 N O N 92 N O N 93 N C N 94 R C N 95 N O N 96 S C N 97 N O N 98 N C N 99 R C Y 100 N N Y 101 N C Y 102 N N Y 103 N C Y 104 N C N 105 N N Y 106 N N Y 107 N C Y 108 N N Y 109 N C N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N O N 125 N P N 126 N O N 127 N O N 128 N O N 129 N C N 130 R C N 131 N O N 132 S C N 133 N O N 134 N C N 135 R C N 136 N N N 137 N C N 138 N O N 139 N N N 140 N C N 141 N N N 142 N C N 143 N C N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N P N 160 N O N 161 N O N 162 N O N 163 N C N 164 R C N 165 N O N 166 S C N 167 N O N 168 N C N 169 R C Y 170 N N Y 171 N C Y 172 N N Y 173 N C N 174 N C N 175 N O N 176 N N N 177 N C N 178 N N N 179 N N Y 180 N C N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N O N 196 N P N 197 N O N 198 N O N 199 N O N 200 N C N 201 R C N 202 N O N 203 S C N 204 N O N 205 N C N 206 R C N 207 N N N 208 N C N 209 N O N 210 N N N 211 N C N 212 N O N 213 N C N 214 N C N 215 N C N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N N N 232 S C N 233 N C N 234 N O N 235 N C N 236 N C N 237 N C N 238 N O N 239 N N N 240 N O N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C N 256 N C N 257 N C N 258 N O N 259 N O N 260 N O N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N N N 271 N C N 272 N C N 273 N O N 274 N O N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N N N 281 S C N 282 N C N 283 N O N 284 N C Y 285 N C Y 286 N N Y 287 N C Y 288 N C Y 289 N N N 290 N O N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N N N 302 S C N 303 N C N 304 N O N 305 S C N 306 N C N 307 N C N 308 N C N 309 N O N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N N N 324 S C N 325 N C N 326 N O N 327 N C N 328 N C N 329 N C N 330 N C N 331 N O N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N N N 346 S C N 347 N C N 348 N O N 349 N C N 350 N C N 351 N C N 352 N C N 353 N N N 354 N O N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N N N 371 S C N 372 N C N 373 N O N 374 N C N 375 N C N 376 N S N 377 N C N 378 N O N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N N N 391 S C N 392 N C N 393 N O N 394 N C Y 395 N C Y 396 N C Y 397 N C Y 398 N C Y 399 N C Y 400 N C N 401 N O N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N N N 414 S C N 415 N C N 416 N O N 417 N C N 418 N C N 419 N C N 420 N O N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N N N 431 S C N 432 N C N 433 N O N 434 N C N 435 N O N 436 N O N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N S N 445 N O N 446 N O N 447 N O N 448 N O N 449 N N N 450 S C N 451 N C N 452 N O N 453 R C N 454 N O N 455 N C N 456 N O N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N H N 466 N N N 467 S C N 468 N C N 469 N O N 470 N C Y 471 N C Y 472 N C Y 473 N C Y 474 N C Y 475 N C Y 476 N C N 477 N O N 478 N O N 479 N H N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N N N 491 S C N 492 N C N 493 N O N 494 N C N 495 N C N 496 N C N 497 N O N 498 N H N 499 N H N 500 N H N 501 N H N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N sing Y 111 N sing Y 112 N doub N 113 N sing Y 114 N doub N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N sing Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N doub N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N doub N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N sing N 287 N sing N 288 N sing Y 289 N sing Y 290 N doub Y 291 N doub N 292 N sing Y 293 N sing N 294 N sing Y 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N doub N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N doub N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N doub N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N doub N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N doub N 391 N sing N 392 N sing N 393 N sing N 394 N sing Y 395 N doub Y 396 N sing Y 397 N sing N 398 N sing Y 399 N doub N 400 N sing Y 401 N doub N 402 N sing Y 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N doub N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N doub N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N doub N 438 N doub N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N doub N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N doub N 464 N sing N 465 N sing N 466 N sing N 467 N sing Y 468 N doub Y 469 N sing Y 470 N sing N 471 N sing Y 472 N doub N 473 N sing Y 474 N doub N 475 N sing Y 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N doub N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing UK Nucleic Acids Res. NARHAD 0389 0305-1048 38 4514 4526 10.1093/nar/gkq161 20236989 Insight into F plasmid DNA segregation revealed by structures of SopB and SopB-DNA complexes. 2010 10.2210/pdb3mkw/pdb pdb_00003mkw 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 mirrors CCD 2008-10-12 ADSC QUANTUM 4r graphite SINGLE WAVELENGTH M x-ray 1 1.03 1.0 8.3.1 ALS 1.03 SYNCHROTRON ALS BEAMLINE 8.3.1 18-mer sopC repeat 5517.566 DNA (5'-D(*CP*TP*GP*GP*GP*AP*CP*CP*AP*TP*GP*GP*TP*CP*CP*CP*AP*G)-3') 18 mer sopC repeat 2 syn polymer 15157.027 Protein sopB SopB(UNP residues 155-272) 2 man polymer 96.063 SULFATE ION 9 syn non-polymer Plasmid partition protein B no no (DC)(DT)(DG)(DG)(DG)(DA)(DC)(DC)(DA)(DT)(DG)(DG)(DT)(DC)(DC)(DC)(DA)(DG) CTGGGACCATGGTCCCAG U,T polydeoxyribonucleotide no no MGSSHHHHHHSSGLVPRGSHYRPTSAYERGQRYASRLQNEFAGNISALADAENISRKIITRCINTAKLPKSVVALFSHPG ELSARSGDALQKAFTDKEELLKQQASNLHEQKKAGVIFEADEVITLLTSVLKTSSASR MGSSHHHHHHSSGLVPRGSHYRPTSAYERGQRYASRLQNEFAGNISALADAENISRKIITRCINTAKLPKSVVALFSHPG ELSARSGDALQKAFTDKEELLKQQASNLHEQKKAGVIFEADEVITLLTSVLKTSSASR B,P polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n artificial gene, codon optimized for e. coli expression K-12 sample B, ECOK12F047, F plasmid, sopB 83333 Escherichia coli 562 Escherichia coli BL21(DE3) vector pET15b 1 8.12 84.85 VAPOR DIFFUSION, HANGING DROP 8.0 25.5% PEG 4000, 0.17 M lithium sulphate, 0.1 M Tris pH 8.0, 15% glycerol, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 0.020 1 19 U 1 T 18 -2.040 U_DC1:DG18_T 1 -10.840 -0.368 -0.229 -0.392 -8.212 1 20 U 2 T 17 -1.167 U_DT2:DA17_T 2 -2.464 0.373 -0.130 -0.606 3.551 1 19 U 3 T 16 -4.807 U_DG3:DC16_T 3 -3.517 -0.007 0.290 -0.285 -2.554 1 19 U 4 T 15 -2.717 U_DG4:DC15_T 4 -3.269 -0.218 0.043 -0.255 1.494 1 19 U 5 T 14 0.493 U_DG5:DC14_T 5 -4.995 -0.399 -0.005 -0.468 1.574 1 20 U 6 T 13 -6.162 U_DA6:DT13_T 6 -4.055 0.285 -0.184 -0.281 7.207 1 19 U 7 T 12 4.520 U_DC7:DG12_T 7 -6.765 0.144 -0.226 -0.380 -7.004 1 19 U 8 T 11 -3.805 U_DC8:DG11_T 8 2.088 0.295 0.000 -0.523 2.016 1 20 U 9 T 10 -6.292 U_DA9:DT10_T 9 -8.028 0.649 -0.326 -0.316 -3.459 1 20 U 10 T 9 -1.405 U_DT10:DA9_T 10 -5.620 -0.372 -0.234 -0.237 8.928 1 19 U 11 T 8 -3.229 U_DG11:DC8_T 11 0.180 -0.326 0.125 -0.437 -8.814 1 19 U 12 T 7 -1.728 U_DG12:DC7_T 12 -6.390 0.260 -0.368 -0.364 -2.124 1 20 U 13 T 6 -8.404 U_DT13:DA6_T 13 -4.769 -0.573 -0.185 -0.336 1.875 1 19 U 14 T 5 1.048 U_DC14:DG5_T 14 -4.987 0.291 -0.001 -0.309 0.623 1 19 U 15 T 4 0.410 U_DC15:DG4_T 15 -1.575 0.259 0.190 -0.308 -2.063 1 19 U 16 T 3 -2.197 U_DC16:DG3_T 16 -4.678 -0.096 0.304 -0.245 8.386 1 20 U 17 T 2 2.087 U_DA17:DT2_T 17 -3.389 -0.077 0.047 -0.507 -1.182 1 19 U 18 T 1 -3.643 U_DG18:DC1_T 18 -10.567 0.010 -0.140 -0.350 3.472 40.128 U U 1 2 10.684 T T 18 17 3.578 7.288 0.471 -0.419 UU_DC1DT2:DA17DG18_TT 1 2.635 -3.862 39.403 -1.515 -0.360 3.129 31.399 U U 2 3 3.642 T T 17 16 3.130 1.970 -0.190 0.025 UU_DT2DG3:DC16DA17_TT 2 -0.605 1.118 31.333 -0.308 0.243 3.541 36.361 U U 3 4 1.663 T T 16 15 3.492 1.034 0.649 -0.253 UU_DG3DG4:DC15DC16_TT 3 5.555 -8.936 35.934 -0.561 -0.203 3.275 29.828 U U 4 5 5.904 T T 15 14 3.289 3.032 -0.486 -0.228 UU_DG4DG5:DC14DC15_TT 4 -1.914 3.728 29.617 -1.078 0.543 3.218 40.182 U U 5 6 4.750 T T 14 13 3.256 3.260 -0.265 -0.259 UU_DG5DA6:DT13DC14_TT 5 1.019 -1.484 40.042 -0.744 0.501 2.915 29.788 U U 6 7 7.535 T T 13 12 3.156 3.860 0.906 -1.099 UU_DA6DC7:DG12DT13_TT 6 -2.277 4.446 29.457 -2.890 -2.206 3.372 30.102 U U 7 8 11.241 T T 12 11 3.584 5.796 -0.931 -1.129 UU_DC7DC8:DG11DG12_TT 7 -2.540 4.926 29.444 -3.448 1.234 3.204 38.456 U U 8 9 8.032 T T 11 10 3.223 5.259 -0.419 0.718 UU_DC8DA9:DT10DG11_TT 8 5.346 -8.165 37.745 0.442 1.296 3.431 28.396 U U 9 10 -9.621 T T 10 9 3.349 -4.698 0.265 -0.811 UU_DA9DT10:DA9DT10_TT 9 -0.544 1.114 28.008 -0.526 -0.672 3.184 38.608 U U 10 11 9.135 T T 9 8 3.118 6.005 0.138 0.906 UU_DT10DG11:DC8DA9_TT 10 -4.438 6.752 37.907 0.651 -0.742 3.475 31.070 U U 11 12 11.674 T T 8 7 3.736 6.203 0.640 -1.200 UU_DG11DG12:DC7DC8_TT 11 3.204 -6.031 30.294 -3.568 -0.508 2.930 27.078 U U 12 13 6.728 T T 7 6 3.103 3.143 -0.902 -1.111 UU_DG12DT13:DA6DC7_TT 12 0.751 -1.608 26.888 -3.109 2.103 3.153 38.980 U U 13 14 4.724 T T 6 5 3.204 3.149 0.401 -0.468 UU_DT13DC14:DG5DA6_TT 13 -0.505 0.758 38.855 -1.073 -0.660 3.328 32.742 U U 14 15 7.908 T T 5 4 3.371 4.445 0.742 -0.077 UU_DC14DC15:DG4DG5_TT 14 -0.139 0.247 32.446 -0.924 -1.341 3.484 35.297 U U 15 16 -3.307 T T 4 3 3.409 -2.000 -0.846 -0.082 UU_DC15DC16:DG3DG4_TT 15 -4.232 6.999 34.995 0.179 0.733 3.180 33.619 U U 16 17 3.504 T T 3 2 3.191 2.025 0.357 0.042 UU_DC16DA17:DT2DG3_TT 16 -0.712 1.232 33.553 -0.250 -0.731 3.414 37.703 U U 17 18 10.641 T T 2 1 3.508 6.836 -0.712 -0.456 UU_DA17DG18:DC1DT2_TT 17 -2.658 4.137 37.008 -1.651 0.734 chem_comp_atom chem_comp_bond database_2 struct_ref_seq_dif struct_site pdbx_initial_refinement_model repository Initial release Version format compliance Data collection Database references Derived calculations Refinement description 1 0 2010-05-05 1 1 2011-07-13 1 2 2024-02-21 1 3 2024-04-03 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id SopB(155-323)-18mer, I23 crystal form SopB(155-272)-18mer complex, P21 form RCSB Y RCSB 2010-04-15 REL REL SO4 SULFATE ION The DNA was chemically synthesized. sample the FL SopB-18mer I23 Other experimental model SO4 936 3 SO4 SO4 936 B SO4 836 3 SO4 SO4 836 B SO4 835 3 SO4 SO4 835 B SO4 135 3 SO4 SO4 273 P SO4 235 3 SO4 SO4 274 P SO4 335 3 SO4 SO4 335 P SO4 435 3 SO4 SO4 435 P SO4 865 3 SO4 SO4 865 P SO4 965 3 SO4 SO4 965 P DC 1 n 1 DC 1 U DT 2 n 2 DT 2 U DG 3 n 3 DG 3 U DG 4 n 4 DG 4 U DG 5 n 5 DG 5 U DA 6 n 6 DA 6 U DC 7 n 7 DC 7 U DC 8 n 8 DC 8 U DA 9 n 9 DA 9 U DT 10 n 10 DT 10 U DG 11 n 11 DG 11 U DG 12 n 12 DG 12 U DT 13 n 13 DT 13 U DC 14 n 14 DC 14 U DC 15 n 15 DC 15 U DC 16 n 16 DC 16 U DA 17 n 17 DA 17 U DG 18 n 18 DG 18 U DC 1 n 1 DC 1 T DT 2 n 2 DT 2 T DG 3 n 3 DG 3 T DG 4 n 4 DG 4 T DG 5 n 5 DG 5 T DA 6 n 6 DA 6 T DC 7 n 7 DC 7 T DC 8 n 8 DC 8 T DA 9 n 9 DA 9 T DT 10 n 10 DT 10 T DG 11 n 11 DG 11 T DG 12 n 12 DG 12 T DT 13 n 13 DT 13 T DC 14 n 14 DC 14 T DC 15 n 15 DC 15 T DC 16 n 16 DC 16 T DA 17 n 17 DA 17 T DG 18 n 18 DG 18 T n 1 135 B n 2 136 B n 3 137 B n 4 138 B n 5 139 B n 6 140 B n 7 141 B n 8 142 B n 9 143 B n 10 144 B n 11 145 B n 12 146 B n 13 147 B n 14 148 B n 15 149 B n 16 150 B n 17 151 B n 18 152 B n 19 153 B n 20 154 B n 21 155 B n 22 156 B PRO 157 n 23 PRO 157 B THR 158 n 24 THR 158 B SER 159 n 25 SER 159 B ALA 160 n 26 ALA 160 B TYR 161 n 27 TYR 161 B GLU 162 n 28 GLU 162 B ARG 163 n 29 ARG 163 B GLY 164 n 30 GLY 164 B GLN 165 n 31 GLN 165 B ARG 166 n 32 ARG 166 B TYR 167 n 33 TYR 167 B ALA 168 n 34 ALA 168 B SER 169 n 35 SER 169 B ARG 170 n 36 ARG 170 B LEU 171 n 37 LEU 171 B GLN 172 n 38 GLN 172 B ASN 173 n 39 ASN 173 B GLU 174 n 40 GLU 174 B PHE 175 n 41 PHE 175 B ALA 176 n 42 ALA 176 B GLY 177 n 43 GLY 177 B ASN 178 n 44 ASN 178 B ILE 179 n 45 ILE 179 B SER 180 n 46 SER 180 B ALA 181 n 47 ALA 181 B LEU 182 n 48 LEU 182 B ALA 183 n 49 ALA 183 B ASP 184 n 50 ASP 184 B ALA 185 n 51 ALA 185 B GLU 186 n 52 GLU 186 B ASN 187 n 53 ASN 187 B ILE 188 n 54 ILE 188 B SER 189 n 55 SER 189 B ARG 190 n 56 ARG 190 B LYS 191 n 57 LYS 191 B ILE 192 n 58 ILE 192 B ILE 193 n 59 ILE 193 B THR 194 n 60 THR 194 B ARG 195 n 61 ARG 195 B CYS 196 n 62 CYS 196 B ILE 197 n 63 ILE 197 B ASN 198 n 64 ASN 198 B THR 199 n 65 THR 199 B ALA 200 n 66 ALA 200 B LYS 201 n 67 LYS 201 B LEU 202 n 68 LEU 202 B PRO 203 n 69 PRO 203 B LYS 204 n 70 LYS 204 B SER 205 n 71 SER 205 B VAL 206 n 72 VAL 206 B VAL 207 n 73 VAL 207 B ALA 208 n 74 ALA 208 B LEU 209 n 75 LEU 209 B PHE 210 n 76 PHE 210 B SER 211 n 77 SER 211 B HIS 212 n 78 HIS 212 B PRO 213 n 79 PRO 213 B GLY 214 n 80 GLY 214 B GLU 215 n 81 GLU 215 B LEU 216 n 82 LEU 216 B SER 217 n 83 SER 217 B ALA 218 n 84 ALA 218 B ARG 219 n 85 ARG 219 B SER 220 n 86 SER 220 B GLY 221 n 87 GLY 221 B ASP 222 n 88 ASP 222 B ALA 223 n 89 ALA 223 B LEU 224 n 90 LEU 224 B GLN 225 n 91 GLN 225 B LYS 226 n 92 LYS 226 B ALA 227 n 93 ALA 227 B PHE 228 n 94 PHE 228 B THR 229 n 95 THR 229 B ASP 230 n 96 ASP 230 B LYS 231 n 97 LYS 231 B GLU 232 n 98 GLU 232 B GLU 233 n 99 GLU 233 B LEU 234 n 100 LEU 234 B LEU 235 n 101 LEU 235 B LYS 236 n 102 LYS 236 B GLN 237 n 103 GLN 237 B GLN 238 n 104 GLN 238 B ALA 239 n 105 ALA 239 B SER 240 n 106 SER 240 B ASN 241 n 107 ASN 241 B LEU 242 n 108 LEU 242 B HIS 243 n 109 HIS 243 B GLU 244 n 110 GLU 244 B GLN 245 n 111 GLN 245 B LYS 246 n 112 LYS 246 B LYS 247 n 113 LYS 247 B ALA 248 n 114 ALA 248 B GLY 249 n 115 GLY 249 B VAL 250 n 116 VAL 250 B ILE 251 n 117 ILE 251 B PHE 252 n 118 PHE 252 B GLU 253 n 119 GLU 253 B ALA 254 n 120 ALA 254 B ASP 255 n 121 ASP 255 B GLU 256 n 122 GLU 256 B VAL 257 n 123 VAL 257 B ILE 258 n 124 ILE 258 B THR 259 n 125 THR 259 B LEU 260 n 126 LEU 260 B LEU 261 n 127 LEU 261 B THR 262 n 128 THR 262 B SER 263 n 129 SER 263 B VAL 264 n 130 VAL 264 B LEU 265 n 131 LEU 265 B LYS 266 n 132 LYS 266 B THR 267 n 133 THR 267 B SER 268 n 134 SER 268 B SER 269 n 135 SER 269 B ALA 270 n 136 ALA 270 B ALA 271 n 137 SER 271 B n 138 272 B n 1 135 P n 2 136 P n 3 137 P n 4 138 P n 5 139 P n 6 140 P n 7 141 P n 8 142 P n 9 143 P n 10 144 P n 11 145 P n 12 146 P n 13 147 P n 14 148 P n 15 149 P n 16 150 P n 17 151 P n 18 152 P n 19 153 P n 20 154 P n 21 155 P n 22 156 P PRO 157 n 23 PRO 157 P THR 158 n 24 THR 158 P SER 159 n 25 SER 159 P ALA 160 n 26 ALA 160 P TYR 161 n 27 TYR 161 P GLU 162 n 28 GLU 162 P ARG 163 n 29 ARG 163 P GLY 164 n 30 GLY 164 P GLN 165 n 31 GLN 165 P ARG 166 n 32 ARG 166 P TYR 167 n 33 TYR 167 P ALA 168 n 34 ALA 168 P SER 169 n 35 SER 169 P ARG 170 n 36 ARG 170 P LEU 171 n 37 LEU 171 P GLN 172 n 38 GLN 172 P ASN 173 n 39 ASN 173 P GLU 174 n 40 GLU 174 P PHE 175 n 41 PHE 175 P ALA 176 n 42 ALA 176 P GLY 177 n 43 GLY 177 P ASN 178 n 44 ASN 178 P ILE 179 n 45 ILE 179 P SER 180 n 46 SER 180 P ALA 181 n 47 ALA 181 P LEU 182 n 48 LEU 182 P ALA 183 n 49 ALA 183 P ASP 184 n 50 ASP 184 P ALA 185 n 51 ALA 185 P GLU 186 n 52 GLU 186 P ASN 187 n 53 ASN 187 P ILE 188 n 54 ILE 188 P SER 189 n 55 SER 189 P ARG 190 n 56 ARG 190 P LYS 191 n 57 LYS 191 P ILE 192 n 58 ILE 192 P ILE 193 n 59 ILE 193 P THR 194 n 60 THR 194 P ARG 195 n 61 ARG 195 P CYS 196 n 62 CYS 196 P ILE 197 n 63 ILE 197 P ASN 198 n 64 ASN 198 P THR 199 n 65 THR 199 P ALA 200 n 66 ALA 200 P LYS 201 n 67 LYS 201 P LEU 202 n 68 LEU 202 P PRO 203 n 69 PRO 203 P LYS 204 n 70 LYS 204 P SER 205 n 71 SER 205 P VAL 206 n 72 VAL 206 P VAL 207 n 73 VAL 207 P ALA 208 n 74 ALA 208 P LEU 209 n 75 LEU 209 P PHE 210 n 76 PHE 210 P SER 211 n 77 SER 211 P HIS 212 n 78 HIS 212 P PRO 213 n 79 PRO 213 P GLY 214 n 80 GLY 214 P GLU 215 n 81 GLU 215 P LEU 216 n 82 LEU 216 P SER 217 n 83 SER 217 P ALA 218 n 84 ALA 218 P ARG 219 n 85 ARG 219 P SER 220 n 86 SER 220 P GLY 221 n 87 GLY 221 P ASP 222 n 88 ASP 222 P ALA 223 n 89 ALA 223 P LEU 224 n 90 LEU 224 P GLN 225 n 91 GLN 225 P LYS 226 n 92 LYS 226 P ALA 227 n 93 ALA 227 P PHE 228 n 94 PHE 228 P THR 229 n 95 THR 229 P ASP 230 n 96 ASP 230 P LYS 231 n 97 LYS 231 P GLU 232 n 98 GLU 232 P GLU 233 n 99 GLU 233 P LEU 234 n 100 LEU 234 P LEU 235 n 101 LEU 235 P LYS 236 n 102 LYS 236 P GLN 237 n 103 GLN 237 P GLN 238 n 104 GLN 238 P ALA 239 n 105 ALA 239 P SER 240 n 106 SER 240 P ASN 241 n 107 ASN 241 P LEU 242 n 108 LEU 242 P HIS 243 n 109 HIS 243 P GLU 244 n 110 GLU 244 P GLN 245 n 111 GLN 245 P LYS 246 n 112 LYS 246 P LYS 247 n 113 LYS 247 P ALA 248 n 114 ALA 248 P GLY 249 n 115 GLY 249 P VAL 250 n 116 VAL 250 P ILE 251 n 117 ILE 251 P PHE 252 n 118 PHE 252 P GLU 253 n 119 GLU 253 P ALA 254 n 120 ALA 254 P ASP 255 n 121 ASP 255 P GLU 256 n 122 GLU 256 P VAL 257 n 123 VAL 257 P ILE 258 n 124 ILE 258 P THR 259 n 125 THR 259 P LEU 260 n 126 LEU 260 P LEU 261 n 127 LEU 261 P THR 262 n 128 THR 262 P SER 263 n 129 SER 263 P VAL 264 n 130 VAL 264 P LEU 265 n 131 LEU 265 P LYS 266 n 132 LYS 266 P THR 267 n 133 THR 267 P SER 268 n 134 SER 268 P SER 269 n 135 SER 269 P ALA 270 n 136 ALA 270 P ALA 271 n 137 SER 271 P n 138 272 P author_defined_assembly 4 tetrameric software_defined_assembly PISA 4 tetrameric 6810 -169 16940 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 19_655 -z+3/2,-x+1/2,y+1/2 crystal symmetry operation 300.6900000000 100.2300000000 100.2300000000 1 U O5' DC 1 A O5' DC 1 1 Y 1 B OG SER 271 C OG SER 137 1 Y 1 P OG SER 271 D OG SER 137 1 Y 1 B MET 135 C MET 1 1 Y 1 B GLY 136 C GLY 2 1 Y 1 B SER 137 C SER 3 1 Y 1 B SER 138 C SER 4 1 Y 1 B HIS 139 C HIS 5 1 Y 1 B HIS 140 C HIS 6 1 Y 1 B HIS 141 C HIS 7 1 Y 1 B HIS 142 C HIS 8 1 Y 1 B HIS 143 C HIS 9 1 Y 1 B HIS 144 C HIS 10 1 Y 1 B SER 145 C SER 11 1 Y 1 B SER 146 C SER 12 1 Y 1 B GLY 147 C GLY 13 1 Y 1 B LEU 148 C LEU 14 1 Y 1 B VAL 149 C VAL 15 1 Y 1 B PRO 150 C PRO 16 1 Y 1 B ARG 151 C ARG 17 1 Y 1 B GLY 152 C GLY 18 1 Y 1 B SER 153 C SER 19 1 Y 1 B HIS 154 C HIS 20 1 Y 1 B TYR 155 C TYR 21 1 Y 1 B ARG 156 C ARG 22 1 Y 1 B ARG 272 C ARG 138 1 Y 1 P MET 135 D MET 1 1 Y 1 P GLY 136 D GLY 2 1 Y 1 P SER 137 D SER 3 1 Y 1 P SER 138 D SER 4 1 Y 1 P HIS 139 D HIS 5 1 Y 1 P HIS 140 D HIS 6 1 Y 1 P HIS 141 D HIS 7 1 Y 1 P HIS 142 D HIS 8 1 Y 1 P HIS 143 D HIS 9 1 Y 1 P HIS 144 D HIS 10 1 Y 1 P SER 145 D SER 11 1 Y 1 P SER 146 D SER 12 1 Y 1 P GLY 147 D GLY 13 1 Y 1 P LEU 148 D LEU 14 1 Y 1 P VAL 149 D VAL 15 1 Y 1 P PRO 150 D PRO 16 1 Y 1 P ARG 151 D ARG 17 1 Y 1 P GLY 152 D GLY 18 1 Y 1 P SER 153 D SER 19 1 Y 1 P HIS 154 D HIS 20 1 Y 1 P TYR 155 D TYR 21 1 Y 1 P ARG 156 D ARG 22 1 Y 1 P ARG 272 D ARG 138 1 Y 1 U DT 2 0.068 SIDE CHAIN 1 U DG 12 0.069 SIDE CHAIN 1 T DT 2 0.067 SIDE CHAIN 1 T DG 12 0.078 SIDE CHAIN 1 T DG 18 0.057 SIDE CHAIN 1 B ASN 173 -114.63 -79.77 1 B GLU 174 -38.54 -18.93 1 B PHE 175 -142.92 23.80 1 B LYS 231 -150.28 36.93 1 B ALA 254 -39.08 -70.34 1 B SER 268 -54.52 -7.48 1 P ASN 173 -111.59 -91.12 1 P GLU 174 -37.56 -22.34 1 P ALA 176 27.43 84.47 1 P SER 189 -37.45 145.11 1 P LYS 231 -157.60 34.35 1 P ALA 254 25.75 -94.23 protein_rep.param protein.top water_rep.param water.top ion.param ion.top dna-rna_rep.param dna-rna.top 71.6 0.00 0.00 0.00 0.00 0.00 0.00 BULK SOLVENT MODEL USED 0.268 0.005 0.233 0.234 0.233 2.99 100.23 2666 26800 26808 9.9 98.5 RANDOM 500.03 0.000000 1 RESTRAINED THROUGHOUT 0.0 0 MOLECULAR REPLACEMENT the FL SopB-18mer I23 Engh & Huber FLAT MODEL 73.0147 0.35 0.43 0.45 5.00 0.53 0.49 2.99 100.23 0 2530 45 731 1754 0.006 1.1 17.4 1.04 1.99 1.50 3.49 2.00 3.92 2.00 6.06 2.50 0.417 0.019 0.443 3.18 480 3982 6 10.8 99.6 0.2 2.99 100 3MKW 26809 26809 0 0 0.05 0.06 1 10.6 5 100 0.448 2.99 3.10 2.0 2800 0.448 4 99.0 data collection ADSC Quantum phasing MOLREP refinement CNS 1.2 data reduction MOSFLM data scaling SCALA Structure of sopB(155-272)-18mer complex, I23 form 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N B SER 159 C SER 25 HELX_P B ASN 173 C ASN 39 1 1 15 B ASN 178 C ASN 44 HELX_P B ASN 187 C ASN 53 1 2 10 B SER 189 C SER 55 HELX_P B LEU 202 C LEU 68 1 3 14 B PRO 203 C PRO 69 HELX_P B LEU 209 C LEU 75 1 4 7 B HIS 212 C HIS 78 HELX_P B LEU 216 C LEU 82 5 5 5 B SER 217 C SER 83 HELX_P B PHE 228 C PHE 94 1 6 12 B LYS 231 C LYS 97 HELX_P B ALA 248 C ALA 114 1 7 18 B GLU 253 C GLU 119 HELX_P B VAL 264 C VAL 130 1 8 12 B LEU 265 C LEU 131 HELX_P B ALA 270 C ALA 136 5 9 6 P SER 159 D SER 25 HELX_P P ASN 173 D ASN 39 1 10 15 P ASN 178 D ASN 44 HELX_P P ASN 187 D ASN 53 1 11 10 P SER 189 D SER 55 HELX_P P LYS 201 D LYS 67 1 12 13 P PRO 203 D PRO 69 HELX_P P LEU 209 D LEU 75 1 13 7 P HIS 212 D HIS 78 HELX_P P LEU 216 D LEU 82 5 14 5 P SER 217 D SER 83 HELX_P P THR 229 D THR 95 1 15 13 P LYS 231 D LYS 97 HELX_P P ALA 248 D ALA 114 1 16 18 P ALA 254 D ALA 120 HELX_P P VAL 264 D VAL 130 1 17 11 P LYS 266 D LYS 132 HELX_P P SER 271 D SER 137 1 18 6 hydrog WATSON-CRICK U DC 1 A N3 DC 1 1_555 T DG 18 B N1 DG 18 1_555 hydrog WATSON-CRICK U DC 1 A N4 DC 1 1_555 T DG 18 B O6 DG 18 1_555 hydrog WATSON-CRICK U DC 1 A O2 DC 1 1_555 T DG 18 B N2 DG 18 1_555 hydrog WATSON-CRICK U DT 2 A N3 DT 2 1_555 T DA 17 B N1 DA 17 1_555 hydrog WATSON-CRICK U DT 2 A O4 DT 2 1_555 T DA 17 B N6 DA 17 1_555 hydrog WATSON-CRICK U DG 3 A N1 DG 3 1_555 T DC 16 B N3 DC 16 1_555 hydrog WATSON-CRICK U DG 3 A N2 DG 3 1_555 T DC 16 B O2 DC 16 1_555 hydrog WATSON-CRICK U DG 3 A O6 DG 3 1_555 T DC 16 B N4 DC 16 1_555 hydrog WATSON-CRICK U DG 4 A N1 DG 4 1_555 T DC 15 B N3 DC 15 1_555 hydrog WATSON-CRICK U DG 4 A N2 DG 4 1_555 T DC 15 B O2 DC 15 1_555 hydrog WATSON-CRICK U DG 4 A O6 DG 4 1_555 T DC 15 B N4 DC 15 1_555 hydrog WATSON-CRICK U DG 5 A N1 DG 5 1_555 T DC 14 B N3 DC 14 1_555 hydrog WATSON-CRICK U DG 5 A N2 DG 5 1_555 T DC 14 B O2 DC 14 1_555 hydrog WATSON-CRICK U DG 5 A O6 DG 5 1_555 T DC 14 B N4 DC 14 1_555 hydrog WATSON-CRICK U DA 6 A N1 DA 6 1_555 T DT 13 B N3 DT 13 1_555 hydrog WATSON-CRICK U DA 6 A N6 DA 6 1_555 T DT 13 B O4 DT 13 1_555 hydrog WATSON-CRICK U DC 7 A N3 DC 7 1_555 T DG 12 B N1 DG 12 1_555 hydrog WATSON-CRICK U DC 7 A N4 DC 7 1_555 T DG 12 B O6 DG 12 1_555 hydrog WATSON-CRICK U DC 7 A O2 DC 7 1_555 T DG 12 B N2 DG 12 1_555 hydrog WATSON-CRICK U DC 8 A N3 DC 8 1_555 T DG 11 B N1 DG 11 1_555 hydrog WATSON-CRICK U DC 8 A N4 DC 8 1_555 T DG 11 B O6 DG 11 1_555 hydrog WATSON-CRICK U DC 8 A O2 DC 8 1_555 T DG 11 B N2 DG 11 1_555 hydrog WATSON-CRICK U DA 9 A N1 DA 9 1_555 T DT 10 B N3 DT 10 1_555 hydrog WATSON-CRICK U DA 9 A N6 DA 9 1_555 T DT 10 B O4 DT 10 1_555 hydrog WATSON-CRICK U DT 10 A N3 DT 10 1_555 T DA 9 B N1 DA 9 1_555 hydrog WATSON-CRICK U DT 10 A O4 DT 10 1_555 T DA 9 B N6 DA 9 1_555 hydrog WATSON-CRICK U DG 11 A N1 DG 11 1_555 T DC 8 B N3 DC 8 1_555 hydrog WATSON-CRICK U DG 11 A N2 DG 11 1_555 T DC 8 B O2 DC 8 1_555 hydrog WATSON-CRICK U DG 11 A O6 DG 11 1_555 T DC 8 B N4 DC 8 1_555 hydrog WATSON-CRICK U DG 12 A N1 DG 12 1_555 T DC 7 B N3 DC 7 1_555 hydrog WATSON-CRICK U DG 12 A N2 DG 12 1_555 T DC 7 B O2 DC 7 1_555 hydrog WATSON-CRICK U DG 12 A O6 DG 12 1_555 T DC 7 B N4 DC 7 1_555 hydrog WATSON-CRICK U DT 13 A N3 DT 13 1_555 T DA 6 B N1 DA 6 1_555 hydrog WATSON-CRICK U DT 13 A O4 DT 13 1_555 T DA 6 B N6 DA 6 1_555 hydrog WATSON-CRICK U DC 14 A N3 DC 14 1_555 T DG 5 B N1 DG 5 1_555 hydrog WATSON-CRICK U DC 14 A N4 DC 14 1_555 T DG 5 B O6 DG 5 1_555 hydrog WATSON-CRICK U DC 14 A O2 DC 14 1_555 T DG 5 B N2 DG 5 1_555 hydrog WATSON-CRICK U DC 15 A N3 DC 15 1_555 T DG 4 B N1 DG 4 1_555 hydrog WATSON-CRICK U DC 15 A N4 DC 15 1_555 T DG 4 B O6 DG 4 1_555 hydrog WATSON-CRICK U DC 15 A O2 DC 15 1_555 T DG 4 B N2 DG 4 1_555 hydrog WATSON-CRICK U DC 16 A N3 DC 16 1_555 T DG 3 B N1 DG 3 1_555 hydrog WATSON-CRICK U DC 16 A N4 DC 16 1_555 T DG 3 B O6 DG 3 1_555 hydrog WATSON-CRICK U DC 16 A O2 DC 16 1_555 T DG 3 B N2 DG 3 1_555 hydrog WATSON-CRICK U DA 17 A N1 DA 17 1_555 T DT 2 B N3 DT 2 1_555 hydrog WATSON-CRICK U DA 17 A N6 DA 17 1_555 T DT 2 B O4 DT 2 1_555 hydrog WATSON-CRICK U DG 18 A N1 DG 18 1_555 T DC 1 B N3 DC 1 1_555 hydrog WATSON-CRICK U DG 18 A N2 DG 18 1_555 T DC 1 B O2 DC 1 1_555 hydrog WATSON-CRICK U DG 18 A O6 DG 18 1_555 T DC 1 B N4 DC 1 1_555 DNA BINDING PROTEIN/DNA segregation, sopB, F plasmid, centromere, DNA BINDING PROTEIN-DNA complex SOPB_ECOLI UNP 2 155 P62558 YRPTSAYERGQRYASRLQNEFAGNISALADAENISRKIITRCINTAKLPKSVVALFSHPGELSARSGDALQKAFTDKEEL LKQQASNLHEQKKAGVIFEAEEVITLLTSVLKTSSASR 3MKW PDB 1 1 3MKW CTGGGACCATGGTCCCAG 155 272 3MKW 155 272 P62558 B 1 21 138 155 272 3MKW 155 272 P62558 P 1 21 138 1 18 3MKW 1 18 3MKW U 2 1 18 1 18 3MKW 1 18 3MKW T 2 1 18 1 expression tag MET 135 3MKW B P62558 UNP 1 1 expression tag GLY 136 3MKW B P62558 UNP 2 1 expression tag SER 137 3MKW B P62558 UNP 3 1 expression tag SER 138 3MKW B P62558 UNP 4 1 expression tag HIS 139 3MKW B P62558 UNP 5 1 expression tag HIS 140 3MKW B P62558 UNP 6 1 expression tag HIS 141 3MKW B P62558 UNP 7 1 expression tag HIS 142 3MKW B P62558 UNP 8 1 expression tag HIS 143 3MKW B P62558 UNP 9 1 expression tag HIS 144 3MKW B P62558 UNP 10 1 expression tag SER 145 3MKW B P62558 UNP 11 1 expression tag SER 146 3MKW B P62558 UNP 12 1 expression tag GLY 147 3MKW B P62558 UNP 13 1 expression tag LEU 148 3MKW B P62558 UNP 14 1 expression tag VAL 149 3MKW B P62558 UNP 15 1 expression tag PRO 150 3MKW B P62558 UNP 16 1 expression tag ARG 151 3MKW B P62558 UNP 17 1 expression tag GLY 152 3MKW B P62558 UNP 18 1 expression tag SER 153 3MKW B P62558 UNP 19 1 expression tag HIS 154 3MKW B P62558 UNP 20 1 GLU conflict ASP 255 3MKW B P62558 UNP 255 121 2 expression tag MET 135 3MKW P P62558 UNP 1 2 expression tag GLY 136 3MKW P P62558 UNP 2 2 expression tag SER 137 3MKW P P62558 UNP 3 2 expression tag SER 138 3MKW P P62558 UNP 4 2 expression tag HIS 139 3MKW P P62558 UNP 5 2 expression tag HIS 140 3MKW P P62558 UNP 6 2 expression tag HIS 141 3MKW P P62558 UNP 7 2 expression tag HIS 142 3MKW P P62558 UNP 8 2 expression tag HIS 143 3MKW P P62558 UNP 9 2 expression tag HIS 144 3MKW P P62558 UNP 10 2 expression tag SER 145 3MKW P P62558 UNP 11 2 expression tag SER 146 3MKW P P62558 UNP 12 2 expression tag GLY 147 3MKW P P62558 UNP 13 2 expression tag LEU 148 3MKW P P62558 UNP 14 2 expression tag VAL 149 3MKW P P62558 UNP 15 2 expression tag PRO 150 3MKW P P62558 UNP 16 2 expression tag ARG 151 3MKW P P62558 UNP 17 2 expression tag GLY 152 3MKW P P62558 UNP 18 2 expression tag SER 153 3MKW P P62558 UNP 19 2 expression tag HIS 154 3MKW P P62558 UNP 20 2 GLU conflict ASP 255 3MKW P P62558 UNP 255 121 BINDING SITE FOR RESIDUE SO4 B 936 B SO4 936 Software 2 BINDING SITE FOR RESIDUE SO4 B 836 B SO4 836 Software 2 BINDING SITE FOR RESIDUE SO4 B 835 B SO4 835 Software 3 BINDING SITE FOR RESIDUE SO4 P 273 P SO4 273 Software 2 BINDING SITE FOR RESIDUE SO4 P 274 P SO4 274 Software 3 BINDING SITE FOR RESIDUE SO4 P 335 P SO4 335 Software 8 BINDING SITE FOR RESIDUE SO4 P 435 P SO4 435 Software 2 BINDING SITE FOR RESIDUE SO4 P 865 P SO4 865 Software 4 BINDING SITE FOR RESIDUE SO4 P 965 P SO4 965 Software 3 B ARG 190 C ARG 56 2 1_555 T DC 15 B DC 15 2 1_555 B ARG 219 C ARG 85 2 1_555 U DC 7 A DC 7 2 1_555 B LYS 201 C LYS 67 3 1_555 B GLN 225 C GLN 91 3 1_555 B GLU 232 C GLU 98 3 1_555 P ARG 219 D ARG 85 2 1_555 T DC 7 B DC 7 2 19_655 P SER 189 D SER 55 3 1_555 P ARG 190 D ARG 56 3 1_555 U DC 15 A DC 15 3 19_655 P LEU 209 D LEU 75 8 1_555 P PHE 210 D PHE 76 8 1_555 P SER 211 D SER 77 8 1_555 P GLU 215 D GLU 81 8 1_555 P LYS 246 D LYS 112 8 1_555 P PHE 252 D PHE 118 8 1_555 P GLU 253 D GLU 119 8 1_555 P ALA 254 D ALA 120 8 1_555 P PRO 203 D PRO 69 2 1_555 P LYS 204 D LYS 70 2 1_555 P LYS 201 D LYS 67 4 1_555 P GLN 225 D GLN 91 4 1_555 P PHE 228 D PHE 94 4 1_555 P GLU 232 D GLU 98 4 1_555 P LEU 265 D LEU 131 3 1_555 P LYS 266 D LYS 132 3 1_555 P THR 267 D THR 133 3 1_555 197 I 2 3