0.014790
0.000000
0.000000
0.000000
0.014790
0.000000
0.000000
0.000000
0.004459
0.000000
0.000000
0.000000
Stein, A.J.
Cui, H.
Chin, S.
Savchenko, A.
Joachimiak, A.
Midwest Center for Structural Genomics (MCSG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.000
90.000
90.000
67.613
67.613
224.279
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
The Crystal Structure of a Homoserine Dehydrogenase from Thiobacillus denitrificans to 2.15A
100
1
CCD
2010-01-01
ADSC QUANTUM 315
Double crystal
SINGLE WAVELENGTH
x-ray
1
0.9794
1.0
19-ID
APS
0.9794
SYNCHROTRON
APS BEAMLINE 19-ID
48389.023
Homoserine dehydrogenase
1.1.1.3
1
man
polymer
96.063
SULFATE ION
3
syn
non-polymer
18.015
water
113
nat
water
no
yes
ENLYFQG(MSE)KPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAGGLPLTTNPFDVVDD
PEIDIVVELIGGLEPARELV(MSE)QAIANGKHVVTANKHLVAKYGNEIFAAAQAKGV(MSE)VTFEAAVAGGIPIIKAL
REGLTANRIEWLAGIINGTSNFILSE(MSE)RDKGAAFDDVLKEAQRLGYAEADPTFDIEGIDAAHKLTILSAIAFGIP
(MSE)QFERAYTEGISQLTREDVRYAEELGYRIKLLGIARRAENGIELRVHPTLIPERRLIANVDGA(MSE)NAVLVKGD
AVGPTLYYGAGAGSEPTASAVVADLVDVTRLHTADPHHRVPHLAFQPDQLADTPILP(MSE)EAVRTAYYLRLRAFDRPG
VLADITRILADSSISIDA(MSE)VQKEPAEGEEQVDIILLTHVTLEKNVNAAIAKIEALDAVAGKV(MSE)RIRLEDLGA
K
ENLYFQGMKPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAGGLPLTTNPFDVVDDPEID
IVVELIGGLEPARELVMQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVMVTFEAAVAGGIPIIKALREGLTANRIEWL
AGIINGTSNFILSEMRDKGAAFDDVLKEAQRLGYAEADPTFDIEGIDAAHKLTILSAIAFGIPMQFERAYTEGISQLTRE
DVRYAEELGYRIKLLGIARRAENGIELRVHPTLIPERRLIANVDGAMNAVLVKGDAVGPTLYYGAGAGSEPTASAVVADL
VDVTRLHTADPHHRVPHLAFQPDQLADTPILPMEAVRTAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEE
QVDIILLTHVTLEKNVNAAIAKIEALDAVAGKVMRIRLEDLGAK
A
APC40289
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
ATCC 25259
sample
Tbd_0843
292415
Thiobacillus denitrificans
469008
Escherichia coli
BL21(DE3)
plasmid
pET derivative
1
2.72
54.9
VAPOR DIFFUSION, SITTING DROP
6.5
1.5M Ammonium sulfate, 0.1M Bis-Tris pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 289K
289
Midwest Center for Structural Genomics
MCSG
PSI, Protein Structure Initiative
software
repository
Initial release
Version format compliance
Refinement description
1
0
2010-05-12
1
1
2011-07-13
1
2
2017-11-08
Y
RCSB
Y
RCSB
2010-04-30
REL
REL
SO4
SULFATE ION
HOH
water
SO4
1
2
SO4
SO4
438
A
SO4
2
2
SO4
SO4
439
A
SO4
3
2
SO4
SO4
440
A
HOH
1
3
HOH
HOH
441
A
HOH
2
3
HOH
HOH
442
A
HOH
3
3
HOH
HOH
443
A
HOH
4
3
HOH
HOH
444
A
HOH
5
3
HOH
HOH
445
A
HOH
6
3
HOH
HOH
446
A
HOH
7
3
HOH
HOH
447
A
HOH
8
3
HOH
HOH
448
A
HOH
9
3
HOH
HOH
449
A
HOH
10
3
HOH
HOH
450
A
HOH
11
3
HOH
HOH
451
A
HOH
12
3
HOH
HOH
452
A
HOH
13
3
HOH
HOH
453
A
HOH
14
3
HOH
HOH
454
A
HOH
15
3
HOH
HOH
455
A
HOH
16
3
HOH
HOH
456
A
HOH
17
3
HOH
HOH
457
A
HOH
18
3
HOH
HOH
458
A
HOH
19
3
HOH
HOH
459
A
HOH
20
3
HOH
HOH
460
A
HOH
21
3
HOH
HOH
461
A
HOH
22
3
HOH
HOH
462
A
HOH
23
3
HOH
HOH
463
A
HOH
24
3
HOH
HOH
464
A
HOH
25
3
HOH
HOH
465
A
HOH
26
3
HOH
HOH
466
A
HOH
27
3
HOH
HOH
467
A
HOH
28
3
HOH
HOH
468
A
HOH
29
3
HOH
HOH
469
A
HOH
30
3
HOH
HOH
470
A
HOH
31
3
HOH
HOH
471
A
HOH
32
3
HOH
HOH
472
A
HOH
33
3
HOH
HOH
473
A
HOH
34
3
HOH
HOH
474
A
HOH
35
3
HOH
HOH
475
A
HOH
36
3
HOH
HOH
476
A
HOH
37
3
HOH
HOH
477
A
HOH
38
3
HOH
HOH
478
A
HOH
39
3
HOH
HOH
479
A
HOH
40
3
HOH
HOH
480
A
HOH
41
3
HOH
HOH
481
A
HOH
42
3
HOH
HOH
482
A
HOH
43
3
HOH
HOH
483
A
HOH
44
3
HOH
HOH
484
A
HOH
45
3
HOH
HOH
485
A
HOH
46
3
HOH
HOH
486
A
HOH
47
3
HOH
HOH
487
A
HOH
48
3
HOH
HOH
488
A
HOH
49
3
HOH
HOH
489
A
HOH
50
3
HOH
HOH
490
A
HOH
51
3
HOH
HOH
491
A
HOH
52
3
HOH
HOH
492
A
HOH
53
3
HOH
HOH
493
A
HOH
54
3
HOH
HOH
494
A
HOH
55
3
HOH
HOH
495
A
HOH
56
3
HOH
HOH
496
A
HOH
57
3
HOH
HOH
497
A
HOH
58
3
HOH
HOH
498
A
HOH
59
3
HOH
HOH
499
A
HOH
60
3
HOH
HOH
500
A
HOH
61
3
HOH
HOH
501
A
HOH
62
3
HOH
HOH
502
A
HOH
63
3
HOH
HOH
503
A
HOH
64
3
HOH
HOH
504
A
HOH
65
3
HOH
HOH
505
A
HOH
66
3
HOH
HOH
506
A
HOH
67
3
HOH
HOH
507
A
HOH
68
3
HOH
HOH
508
A
HOH
69
3
HOH
HOH
509
A
HOH
70
3
HOH
HOH
510
A
HOH
71
3
HOH
HOH
511
A
HOH
72
3
HOH
HOH
512
A
HOH
73
3
HOH
HOH
513
A
HOH
74
3
HOH
HOH
514
A
HOH
75
3
HOH
HOH
515
A
HOH
76
3
HOH
HOH
516
A
HOH
77
3
HOH
HOH
517
A
HOH
78
3
HOH
HOH
518
A
HOH
79
3
HOH
HOH
519
A
HOH
80
3
HOH
HOH
520
A
HOH
81
3
HOH
HOH
521
A
HOH
82
3
HOH
HOH
522
A
HOH
83
3
HOH
HOH
523
A
HOH
84
3
HOH
HOH
524
A
HOH
85
3
HOH
HOH
525
A
HOH
86
3
HOH
HOH
526
A
HOH
87
3
HOH
HOH
527
A
HOH
88
3
HOH
HOH
528
A
HOH
89
3
HOH
HOH
529
A
HOH
90
3
HOH
HOH
530
A
HOH
91
3
HOH
HOH
531
A
HOH
92
3
HOH
HOH
532
A
HOH
93
3
HOH
HOH
533
A
HOH
94
3
HOH
HOH
534
A
HOH
95
3
HOH
HOH
535
A
HOH
96
3
HOH
HOH
536
A
HOH
97
3
HOH
HOH
537
A
HOH
98
3
HOH
HOH
538
A
HOH
99
3
HOH
HOH
539
A
HOH
100
3
HOH
HOH
540
A
HOH
101
3
HOH
HOH
541
A
HOH
102
3
HOH
HOH
542
A
HOH
103
3
HOH
HOH
543
A
HOH
104
3
HOH
HOH
544
A
HOH
105
3
HOH
HOH
545
A
HOH
106
3
HOH
HOH
546
A
HOH
107
3
HOH
HOH
547
A
HOH
108
3
HOH
HOH
548
A
HOH
109
3
HOH
HOH
549
A
HOH
110
3
HOH
HOH
550
A
HOH
111
3
HOH
HOH
551
A
HOH
112
3
HOH
HOH
552
A
HOH
113
3
HOH
HOH
553
A
n
1
-6
A
n
2
-5
A
n
3
-4
A
n
4
-3
A
PHE
-2
n
5
PHE
-2
A
GLN
-1
n
6
GLN
-1
A
GLY
0
n
7
GLY
0
A
MSE
1
n
8
MSE
1
A
LYS
2
n
9
LYS
2
A
PRO
3
n
10
PRO
3
A
ILE
4
n
11
ILE
4
A
HIS
5
n
12
HIS
5
A
VAL
6
n
13
VAL
6
A
GLY
7
n
14
GLY
7
A
LEU
8
n
15
LEU
8
A
LEU
9
n
16
LEU
9
A
GLY
10
n
17
GLY
10
A
LEU
11
n
18
LEU
11
A
GLY
12
n
19
GLY
12
A
THR
13
n
20
THR
13
A
VAL
14
n
21
VAL
14
A
GLY
15
n
22
GLY
15
A
GLY
16
n
23
GLY
16
A
GLY
17
n
24
GLY
17
A
THR
18
n
25
THR
18
A
LEU
19
n
26
LEU
19
A
THR
20
n
27
THR
20
A
VAL
21
n
28
VAL
21
A
LEU
22
n
29
LEU
22
A
ARG
23
n
30
ARG
23
A
ARG
24
n
31
ARG
24
A
ASN
25
n
32
ASN
25
A
ALA
26
n
33
ALA
26
A
GLU
27
n
34
GLU
27
A
GLU
28
n
35
GLU
28
A
ILE
29
n
36
ILE
29
A
THR
30
n
37
THR
30
A
ARG
31
n
38
ARG
31
A
ARG
32
n
39
ARG
32
A
ALA
33
n
40
ALA
33
A
GLY
34
n
41
GLY
34
A
ARG
35
n
42
ARG
35
A
GLU
36
n
43
GLU
36
A
ILE
37
n
44
ILE
37
A
ARG
38
n
45
ARG
38
A
VAL
39
n
46
VAL
39
A
VAL
40
n
47
VAL
40
A
ARG
41
n
48
ARG
41
A
ALA
42
n
49
ALA
42
A
ALA
43
n
50
ALA
43
A
VAL
44
n
51
VAL
44
A
ARG
45
n
52
ARG
45
A
ASN
46
n
53
ASN
46
A
LEU
47
n
54
LEU
47
A
ASP
48
n
55
ASP
48
A
LYS
49
n
56
LYS
49
A
ALA
50
n
57
ALA
50
A
GLU
51
n
58
GLU
51
A
ALA
52
n
59
ALA
52
A
LEU
53
n
60
LEU
53
A
ALA
54
n
61
ALA
54
A
GLY
55
n
62
GLY
55
A
GLY
56
n
63
GLY
56
A
LEU
57
n
64
LEU
57
A
PRO
58
n
65
PRO
58
A
LEU
59
n
66
LEU
59
A
THR
60
n
67
THR
60
A
THR
61
n
68
THR
61
A
ASN
62
n
69
ASN
62
A
PRO
63
n
70
PRO
63
A
PHE
64
n
71
PHE
64
A
ASP
65
n
72
ASP
65
A
VAL
66
n
73
VAL
66
A
VAL
67
n
74
VAL
67
A
ASP
68
n
75
ASP
68
A
ASP
69
n
76
ASP
69
A
PRO
70
n
77
PRO
70
A
GLU
71
n
78
GLU
71
A
ILE
72
n
79
ILE
72
A
ASP
73
n
80
ASP
73
A
ILE
74
n
81
ILE
74
A
VAL
75
n
82
VAL
75
A
VAL
76
n
83
VAL
76
A
GLU
77
n
84
GLU
77
A
LEU
78
n
85
LEU
78
A
ILE
79
n
86
ILE
79
A
GLY
80
n
87
GLY
80
A
GLY
81
n
88
GLY
81
A
LEU
82
n
89
LEU
82
A
GLU
83
n
90
GLU
83
A
PRO
84
n
91
PRO
84
A
ALA
85
n
92
ALA
85
A
ARG
86
n
93
ARG
86
A
GLU
87
n
94
GLU
87
A
LEU
88
n
95
LEU
88
A
VAL
89
n
96
VAL
89
A
MSE
90
n
97
MSE
90
A
GLN
91
n
98
GLN
91
A
ALA
92
n
99
ALA
92
A
ILE
93
n
100
ILE
93
A
ALA
94
n
101
ALA
94
A
ASN
95
n
102
ASN
95
A
GLY
96
n
103
GLY
96
A
LYS
97
n
104
LYS
97
A
HIS
98
n
105
HIS
98
A
VAL
99
n
106
VAL
99
A
VAL
100
n
107
VAL
100
A
THR
101
n
108
THR
101
A
ALA
102
n
109
ALA
102
A
ASN
103
n
110
ASN
103
A
LYS
104
n
111
LYS
104
A
HIS
105
n
112
HIS
105
A
LEU
106
n
113
LEU
106
A
VAL
107
n
114
VAL
107
A
ALA
108
n
115
ALA
108
A
LYS
109
n
116
LYS
109
A
TYR
110
n
117
TYR
110
A
GLY
111
n
118
GLY
111
A
ASN
112
n
119
ASN
112
A
GLU
113
n
120
GLU
113
A
ILE
114
n
121
ILE
114
A
PHE
115
n
122
PHE
115
A
ALA
116
n
123
ALA
116
A
ALA
117
n
124
ALA
117
A
ALA
118
n
125
ALA
118
A
GLN
119
n
126
GLN
119
A
ALA
120
n
127
ALA
120
A
LYS
121
n
128
LYS
121
A
GLY
122
n
129
GLY
122
A
VAL
123
n
130
VAL
123
A
MSE
124
n
131
MSE
124
A
VAL
125
n
132
VAL
125
A
THR
126
n
133
THR
126
A
PHE
127
n
134
PHE
127
A
GLU
128
n
135
GLU
128
A
ALA
129
n
136
ALA
129
A
ALA
130
n
137
ALA
130
A
VAL
131
n
138
VAL
131
A
ALA
132
n
139
ALA
132
A
GLY
133
n
140
GLY
133
A
GLY
134
n
141
GLY
134
A
ILE
135
n
142
ILE
135
A
PRO
136
n
143
PRO
136
A
ILE
137
n
144
ILE
137
A
ILE
138
n
145
ILE
138
A
LYS
139
n
146
LYS
139
A
ALA
140
n
147
ALA
140
A
LEU
141
n
148
LEU
141
A
ARG
142
n
149
ARG
142
A
GLU
143
n
150
GLU
143
A
GLY
144
n
151
GLY
144
A
LEU
145
n
152
LEU
145
A
THR
146
n
153
THR
146
A
ALA
147
n
154
ALA
147
A
ASN
148
n
155
ASN
148
A
ARG
149
n
156
ARG
149
A
ILE
150
n
157
ILE
150
A
GLU
151
n
158
GLU
151
A
TRP
152
n
159
TRP
152
A
LEU
153
n
160
LEU
153
A
ALA
154
n
161
ALA
154
A
GLY
155
n
162
GLY
155
A
ILE
156
n
163
ILE
156
A
ILE
157
n
164
ILE
157
A
ASN
158
n
165
ASN
158
A
GLY
159
n
166
GLY
159
A
THR
160
n
167
THR
160
A
SER
161
n
168
SER
161
A
ASN
162
n
169
ASN
162
A
PHE
163
n
170
PHE
163
A
ILE
164
n
171
ILE
164
A
LEU
165
n
172
LEU
165
A
SER
166
n
173
SER
166
A
GLU
167
n
174
GLU
167
A
MSE
168
n
175
MSE
168
A
ARG
169
n
176
ARG
169
A
ASP
170
n
177
ASP
170
A
LYS
171
n
178
LYS
171
A
GLY
172
n
179
GLY
172
A
ALA
173
n
180
ALA
173
A
ALA
174
n
181
ALA
174
A
PHE
175
n
182
PHE
175
A
ASP
176
n
183
ASP
176
A
ASP
177
n
184
ASP
177
A
VAL
178
n
185
VAL
178
A
LEU
179
n
186
LEU
179
A
LYS
180
n
187
LYS
180
A
GLU
181
n
188
GLU
181
A
ALA
182
n
189
ALA
182
A
GLN
183
n
190
GLN
183
A
ARG
184
n
191
ARG
184
A
LEU
185
n
192
LEU
185
A
GLY
186
n
193
GLY
186
A
TYR
187
n
194
TYR
187
A
ALA
188
n
195
ALA
188
A
GLU
189
n
196
GLU
189
A
ALA
190
n
197
ALA
190
A
ASP
191
n
198
ASP
191
A
PRO
192
n
199
PRO
192
A
THR
193
n
200
THR
193
A
PHE
194
n
201
PHE
194
A
ASP
195
n
202
ASP
195
A
ILE
196
n
203
ILE
196
A
GLU
197
n
204
GLU
197
A
GLY
198
n
205
GLY
198
A
ILE
199
n
206
ILE
199
A
ASP
200
n
207
ASP
200
A
ALA
201
n
208
ALA
201
A
ALA
202
n
209
ALA
202
A
HIS
203
n
210
HIS
203
A
LYS
204
n
211
LYS
204
A
LEU
205
n
212
LEU
205
A
THR
206
n
213
THR
206
A
ILE
207
n
214
ILE
207
A
LEU
208
n
215
LEU
208
A
SER
209
n
216
SER
209
A
ALA
210
n
217
ALA
210
A
ILE
211
n
218
ILE
211
A
ALA
212
n
219
ALA
212
A
PHE
213
n
220
PHE
213
A
GLY
214
n
221
GLY
214
A
ILE
215
n
222
ILE
215
A
PRO
216
n
223
PRO
216
A
MSE
217
n
224
MSE
217
A
GLN
218
n
225
GLN
218
A
PHE
219
n
226
PHE
219
A
GLU
220
n
227
GLU
220
A
ARG
221
n
228
ARG
221
A
ALA
222
n
229
ALA
222
A
TYR
223
n
230
TYR
223
A
THR
224
n
231
THR
224
A
GLU
225
n
232
GLU
225
A
GLY
226
n
233
GLY
226
A
ILE
227
n
234
ILE
227
A
SER
228
n
235
SER
228
A
GLN
229
n
236
GLN
229
A
LEU
230
n
237
LEU
230
A
THR
231
n
238
THR
231
A
ARG
232
n
239
ARG
232
A
GLU
233
n
240
GLU
233
A
ASP
234
n
241
ASP
234
A
VAL
235
n
242
VAL
235
A
ARG
236
n
243
ARG
236
A
TYR
237
n
244
TYR
237
A
ALA
238
n
245
ALA
238
A
GLU
239
n
246
GLU
239
A
GLU
240
n
247
GLU
240
A
LEU
241
n
248
LEU
241
A
GLY
242
n
249
GLY
242
A
TYR
243
n
250
TYR
243
A
ARG
244
n
251
ARG
244
A
ILE
245
n
252
ILE
245
A
LYS
246
n
253
LYS
246
A
LEU
247
n
254
LEU
247
A
LEU
248
n
255
LEU
248
A
GLY
249
n
256
GLY
249
A
ILE
250
n
257
ILE
250
A
ALA
251
n
258
ALA
251
A
ARG
252
n
259
ARG
252
A
ARG
253
n
260
ARG
253
A
ALA
254
n
261
ALA
254
A
GLU
255
n
262
GLU
255
A
ASN
256
n
263
ASN
256
A
GLY
257
n
264
GLY
257
A
ILE
258
n
265
ILE
258
A
GLU
259
n
266
GLU
259
A
LEU
260
n
267
LEU
260
A
ARG
261
n
268
ARG
261
A
VAL
262
n
269
VAL
262
A
HIS
263
n
270
HIS
263
A
PRO
264
n
271
PRO
264
A
THR
265
n
272
THR
265
A
LEU
266
n
273
LEU
266
A
ILE
267
n
274
ILE
267
A
PRO
268
n
275
PRO
268
A
GLU
269
n
276
GLU
269
A
ARG
270
n
277
ARG
270
A
ARG
271
n
278
ARG
271
A
LEU
272
n
279
LEU
272
A
ILE
273
n
280
ILE
273
A
ALA
274
n
281
ALA
274
A
ASN
275
n
282
ASN
275
A
VAL
276
n
283
VAL
276
A
ASP
277
n
284
ASP
277
A
GLY
278
n
285
GLY
278
A
ALA
279
n
286
ALA
279
A
MSE
280
n
287
MSE
280
A
ASN
281
n
288
ASN
281
A
ALA
282
n
289
ALA
282
A
VAL
283
n
290
VAL
283
A
LEU
284
n
291
LEU
284
A
VAL
285
n
292
VAL
285
A
LYS
286
n
293
LYS
286
A
GLY
287
n
294
GLY
287
A
ASP
288
n
295
ASP
288
A
ALA
289
n
296
ALA
289
A
VAL
290
n
297
VAL
290
A
GLY
291
n
298
GLY
291
A
PRO
292
n
299
PRO
292
A
THR
293
n
300
THR
293
A
LEU
294
n
301
LEU
294
A
TYR
295
n
302
TYR
295
A
TYR
296
n
303
TYR
296
A
GLY
297
n
304
GLY
297
A
ALA
298
n
305
ALA
298
A
GLY
299
n
306
GLY
299
A
ALA
300
n
307
ALA
300
A
GLY
301
n
308
GLY
301
A
SER
302
n
309
SER
302
A
GLU
303
n
310
GLU
303
A
PRO
304
n
311
PRO
304
A
THR
305
n
312
THR
305
A
ALA
306
n
313
ALA
306
A
SER
307
n
314
SER
307
A
ALA
308
n
315
ALA
308
A
VAL
309
n
316
VAL
309
A
VAL
310
n
317
VAL
310
A
ALA
311
n
318
ALA
311
A
ASP
312
n
319
ASP
312
A
LEU
313
n
320
LEU
313
A
VAL
314
n
321
VAL
314
A
ASP
315
n
322
ASP
315
A
VAL
316
n
323
VAL
316
A
THR
317
n
324
THR
317
A
ARG
318
n
325
ARG
318
A
LEU
319
n
326
LEU
319
A
HIS
320
n
327
HIS
320
A
THR
321
n
328
THR
321
A
ALA
322
n
329
ALA
322
A
ASP
323
n
330
ASP
323
A
PRO
324
n
331
PRO
324
A
HIS
325
n
332
HIS
325
A
HIS
326
n
333
HIS
326
A
ARG
327
n
334
ARG
327
A
VAL
328
n
335
VAL
328
A
PRO
329
n
336
PRO
329
A
HIS
330
n
337
HIS
330
A
LEU
331
n
338
LEU
331
A
ALA
332
n
339
ALA
332
A
PHE
333
n
340
PHE
333
A
GLN
334
n
341
GLN
334
A
PRO
335
n
342
PRO
335
A
ASP
336
n
343
ASP
336
A
GLN
337
n
344
GLN
337
A
LEU
338
n
345
LEU
338
A
ALA
339
n
346
ALA
339
A
ASP
340
n
347
ASP
340
A
THR
341
n
348
THR
341
A
PRO
342
n
349
PRO
342
A
ILE
343
n
350
ILE
343
A
LEU
344
n
351
LEU
344
A
PRO
345
n
352
PRO
345
A
MSE
346
n
353
MSE
346
A
GLU
347
n
354
GLU
347
A
ALA
348
n
355
ALA
348
A
VAL
349
n
356
VAL
349
A
ARG
350
n
357
ARG
350
A
THR
351
n
358
THR
351
A
ALA
352
n
359
ALA
352
A
TYR
353
n
360
TYR
353
A
TYR
354
n
361
TYR
354
A
LEU
355
n
362
LEU
355
A
ARG
356
n
363
ARG
356
A
LEU
357
n
364
LEU
357
A
ARG
358
n
365
ARG
358
A
ALA
359
n
366
ALA
359
A
PHE
360
n
367
PHE
360
A
n
368
361
A
ARG
362
n
369
ARG
362
A
PRO
363
n
370
PRO
363
A
GLY
364
n
371
GLY
364
A
VAL
365
n
372
VAL
365
A
LEU
366
n
373
LEU
366
A
ALA
367
n
374
ALA
367
A
ASP
368
n
375
ASP
368
A
ILE
369
n
376
ILE
369
A
THR
370
n
377
THR
370
A
ARG
371
n
378
ARG
371
A
ILE
372
n
379
ILE
372
A
LEU
373
n
380
LEU
373
A
ALA
374
n
381
ALA
374
A
ASP
375
n
382
ASP
375
A
SER
376
n
383
SER
376
A
SER
377
n
384
SER
377
A
ILE
378
n
385
ILE
378
A
SER
379
n
386
SER
379
A
ILE
380
n
387
ILE
380
A
ASP
381
n
388
ASP
381
A
ALA
382
n
389
ALA
382
A
MSE
383
n
390
MSE
383
A
VAL
384
n
391
VAL
384
A
GLN
385
n
392
GLN
385
A
LYS
386
n
393
LYS
386
A
n
394
387
A
n
395
388
A
n
396
389
A
n
397
390
A
n
398
391
A
n
399
392
A
GLU
393
n
400
GLU
393
A
GLN
394
n
401
GLN
394
A
VAL
395
n
402
VAL
395
A
ASP
396
n
403
ASP
396
A
ILE
397
n
404
ILE
397
A
ILE
398
n
405
ILE
398
A
LEU
399
n
406
LEU
399
A
LEU
400
n
407
LEU
400
A
THR
401
n
408
THR
401
A
HIS
402
n
409
HIS
402
A
VAL
403
n
410
VAL
403
A
THR
404
n
411
THR
404
A
LEU
405
n
412
LEU
405
A
GLU
406
n
413
GLU
406
A
LYS
407
n
414
LYS
407
A
ASN
408
n
415
ASN
408
A
VAL
409
n
416
VAL
409
A
ASN
410
n
417
ASN
410
A
ALA
411
n
418
ALA
411
A
ALA
412
n
419
ALA
412
A
ILE
413
n
420
ILE
413
A
ALA
414
n
421
ALA
414
A
LYS
415
n
422
LYS
415
A
ILE
416
n
423
ILE
416
A
GLU
417
n
424
GLU
417
A
ALA
418
n
425
ALA
418
A
LEU
419
n
426
LEU
419
A
ASP
420
n
427
ASP
420
A
ALA
421
n
428
ALA
421
A
VAL
422
n
429
VAL
422
A
ALA
423
n
430
ALA
423
A
GLY
424
n
431
GLY
424
A
LYS
425
n
432
LYS
425
A
VAL
426
n
433
VAL
426
A
MSE
427
n
434
MSE
427
A
ARG
428
n
435
ARG
428
A
ILE
429
n
436
ILE
429
A
ARG
430
n
437
ARG
430
A
LEU
431
n
438
LEU
431
A
GLU
432
n
439
GLU
432
A
ASP
433
n
440
ASP
433
A
LEU
434
n
441
LEU
434
A
GLY
435
n
442
GLY
435
A
n
443
436
A
n
444
437
A
3.9836
15.3881
-13.9866
38.5764
-23.3306
21.4450
0.3191
0.2945
0.6953
0.1239
0.9566
2.3650
-0.6703
-0.6049
-1.2758
0.2366
-0.0050
-0.0721
0.2379
-0.0478
0.4282
refined
18.9433
36.1494
50.1633
X-RAY DIFFRACTION
2.9050
0.5191
-1.9324
3.8732
2.0474
2.6467
0.0957
0.0048
0.1546
0.1982
-0.1588
0.2211
0.0539
-0.1652
0.0632
0.0189
-0.0347
0.0121
0.1253
-0.0427
0.1758
refined
15.0694
24.0658
67.9260
X-RAY DIFFRACTION
2.8856
2.8173
-0.4035
7.5753
-1.2396
1.9056
0.1448
-0.1995
0.1185
0.5737
-0.1231
0.4720
0.0100
-0.2020
-0.0217
0.0511
-0.0244
0.0423
0.2190
-0.0581
0.1939
refined
13.8115
25.4369
65.2219
X-RAY DIFFRACTION
3.5944
1.0817
0.5314
3.9703
1.2483
4.5338
0.1512
0.1152
-0.1926
0.1079
-0.0999
0.2911
-0.0039
-0.1778
-0.0514
0.0149
-0.0284
0.0035
0.0797
-0.0289
0.1330
refined
15.7723
15.3413
60.5767
X-RAY DIFFRACTION
2.2969
0.4731
0.5830
0.6689
0.4197
3.2807
0.1166
0.0882
-0.2753
0.0227
-0.1130
-0.0652
0.1377
-0.0093
-0.0036
0.0370
-0.0134
-0.0105
0.1065
-0.0119
0.1945
refined
29.7263
15.4577
66.0551
X-RAY DIFFRACTION
3.0737
0.5961
-0.7143
3.2669
-1.8512
2.7075
0.0487
-0.1762
-0.1013
0.1509
-0.1223
-0.0662
0.1991
0.0781
0.0737
0.1048
-0.0533
-0.0222
0.0894
-0.0249
0.1113
refined
36.5071
24.7309
82.6329
X-RAY DIFFRACTION
5.2438
-2.0332
-2.9265
2.6907
4.2957
10.4409
-0.1867
-0.1090
-0.2826
0.3916
-0.2042
0.5632
0.4563
-1.1654
0.3909
0.4625
-0.1946
0.1029
0.4996
0.1332
0.4924
refined
21.4056
13.7061
95.8487
X-RAY DIFFRACTION
3.7185
-0.3292
0.1683
1.5031
0.6104
3.6624
0.0254
-0.0993
-0.1675
0.1791
-0.0528
0.1626
0.5216
-0.0828
0.0273
0.1207
-0.0107
-0.0262
0.0937
0.0203
0.1145
refined
35.6096
15.6625
79.8358
X-RAY DIFFRACTION
3.0121
4.8853
-6.5147
4.0657
-6.9910
20.7959
-0.0662
0.2437
-0.0489
-0.1649
0.3855
0.1761
0.2356
0.0490
-0.3193
0.3257
0.0319
0.0107
0.2002
-0.0390
0.3003
refined
41.6713
10.0691
76.8337
X-RAY DIFFRACTION
3.2027
-0.5819
-2.2343
1.1905
-8.1672
19.0733
-0.3688
-2.1498
-0.6660
0.5380
0.2921
0.4848
1.0677
0.4172
0.0766
0.7310
0.0130
0.0521
1.1726
0.3322
0.2038
refined
34.9723
14.6150
102.9512
X-RAY DIFFRACTION
5.1415
-0.6738
-2.0281
2.9242
0.0172
4.6805
0.0983
-0.4133
0.0349
0.3305
0.0618
-0.1413
0.2178
0.3149
-0.1601
0.1823
-0.0044
-0.0859
0.1742
0.0507
0.1286
refined
43.0550
18.0482
88.2665
X-RAY DIFFRACTION
1.8606
-2.3331
3.4142
18.8089
1.5209
4.2022
-0.2800
-0.7004
0.7021
1.3176
0.1338
-0.7271
-0.1906
-0.4626
0.1462
0.2917
-0.1100
-0.0208
0.5700
-0.1471
0.1804
refined
36.8955
27.4685
96.1153
X-RAY DIFFRACTION
23.5345
20.5366
-8.8022
17.3552
-7.0753
9.6516
0.1396
0.0623
1.0306
0.1568
-0.0385
0.5576
-0.0982
-0.3364
-0.1012
0.1371
-0.0010
-0.0789
0.0892
0.0118
0.2110
refined
39.8483
29.5977
83.4820
X-RAY DIFFRACTION
6.2885
2.9166
6.6212
3.6283
2.7999
6.1337
0.1451
-0.5540
-0.1912
0.4031
-0.0742
0.1876
0.0990
-0.4113
-0.0709
0.0737
-0.0470
0.0314
0.1766
-0.0002
0.1797
refined
25.7757
28.0127
78.0756
X-RAY DIFFRACTION
15.8622
-1.1303
-3.8493
4.1938
1.5063
-0.5840
-0.0189
0.7520
-0.1495
-0.2306
-0.0664
-0.0393
0.0083
-0.1147
0.0853
0.0652
0.0380
-0.0113
0.1625
0.0236
0.1215
refined
31.4721
29.4288
56.3389
X-RAY DIFFRACTION
0.5347
-0.6607
1.2410
0.3075
-0.5485
5.1501
-0.0249
-0.0730
-0.0354
0.1602
0.0456
-0.0489
0.9000
0.2294
-0.0207
0.3117
0.0298
-0.0684
0.3207
0.0587
0.2609
refined
45.9397
15.1678
80.0006
X-RAY DIFFRACTION
5.3299
2.7465
4.7303
7.1411
2.1253
4.2228
0.4448
-1.0116
0.3436
0.3705
-0.5774
0.3454
0.8907
0.0945
0.1326
0.7792
0.4458
-0.1807
0.7900
-0.0330
0.3020
refined
52.0643
9.0280
109.4605
X-RAY DIFFRACTION
3.0164
0.6922
-1.6571
5.6356
-1.8612
16.3232
0.1773
-0.2711
0.1152
0.3494
0.0855
0.1826
0.4872
0.1116
-0.2628
0.3484
0.0594
-0.1811
0.2607
0.0472
0.2191
refined
48.6352
11.2027
103.4940
X-RAY DIFFRACTION
10.0552
-4.1996
0.4591
0.4861
-2.1217
16.6664
-0.1353
-0.8150
-0.9039
-0.0120
0.1458
0.4628
2.1195
0.5168
-0.0105
1.2779
0.2185
-0.0840
0.3018
0.1174
0.3108
refined
48.9686
1.3135
104.4708
X-RAY DIFFRACTION
7.2790
-9.5003
1.7343
30.2764
-5.0711
17.1945
0.5053
-0.6874
-0.1346
0.5570
-0.3597
0.2458
0.6904
0.7055
-0.1456
0.2776
0.0382
-0.1068
0.4172
0.0065
0.0804
refined
43.7562
16.9427
96.0087
X-RAY DIFFRACTION
A
-2
A
3
X-RAY DIFFRACTION
1
A
4
A
24
X-RAY DIFFRACTION
2
A
25
A
54
X-RAY DIFFRACTION
3
A
55
A
80
X-RAY DIFFRACTION
4
A
81
A
138
X-RAY DIFFRACTION
5
A
139
A
167
X-RAY DIFFRACTION
6
A
168
A
194
X-RAY DIFFRACTION
7
A
195
A
214
X-RAY DIFFRACTION
8
A
215
A
223
X-RAY DIFFRACTION
9
A
224
A
242
X-RAY DIFFRACTION
10
A
243
A
265
X-RAY DIFFRACTION
11
A
266
A
278
X-RAY DIFFRACTION
12
A
279
A
292
X-RAY DIFFRACTION
13
A
293
A
312
X-RAY DIFFRACTION
14
A
313
A
329
X-RAY DIFFRACTION
15
A
330
A
356
X-RAY DIFFRACTION
16
A
357
A
386
X-RAY DIFFRACTION
17
A
393
A
408
X-RAY DIFFRACTION
18
A
409
A
426
X-RAY DIFFRACTION
19
A
427
A
435
X-RAY DIFFRACTION
20
software_defined_assembly
PISA
4
tetrameric
software_defined_assembly
PISA
2
dimeric
author_defined_assembly
1
monomeric
14940
-221
61020
6120
-106
31860
A
MSE
1
SELENOMETHIONINE
A
MSE
8
MET
A
MSE
90
SELENOMETHIONINE
A
MSE
97
MET
A
MSE
124
SELENOMETHIONINE
A
MSE
131
MET
A
MSE
168
SELENOMETHIONINE
A
MSE
175
MET
A
MSE
217
SELENOMETHIONINE
A
MSE
224
MET
A
MSE
280
SELENOMETHIONINE
A
MSE
287
MET
A
MSE
346
SELENOMETHIONINE
A
MSE
353
MET
A
MSE
383
SELENOMETHIONINE
A
MSE
390
MET
A
MSE
427
SELENOMETHIONINE
A
MSE
434
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_665
-x+1,-y+1,z
crystal symmetry operation
67.6130000000
67.6130000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
7_556
y,x,-z+1
crystal symmetry operation
0.0000000000
0.0000000000
224.2790000000
0.0000000000
-1.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
8_666
-y+1,-x+1,-z+1
crystal symmetry operation
67.6130000000
67.6130000000
224.2790000000
A
O
THR
60
A
O
THR
67
A
N
ALA
42
A
N
ALA
49
A
O
ALA
43
A
O
ALA
50
A
N
LEU
8
A
N
LEU
15
A
N
GLY
7
A
N
GLY
14
A
O
VAL
76
A
O
VAL
83
A
N
GLU
77
A
N
GLU
84
A
O
VAL
100
A
O
VAL
107
A
N
VAL
99
A
N
VAL
106
A
O
THR
126
A
O
THR
133
A
N
TYR
223
A
N
TYR
230
A
O
VAL
262
A
O
VAL
269
A
N
LEU
266
A
N
LEU
273
A
O
ARG
430
A
O
ARG
437
A
O
ILE
429
A
O
ILE
436
A
N
TYR
354
A
N
TYR
361
A
N
ALA
359
A
N
ALA
366
A
O
VAL
395
A
O
VAL
402
A
O
LEU
400
A
O
LEU
407
A
N
ASP
381
A
N
ASP
388
A
O
GLY
297
A
O
GLY
304
A
N
ASN
281
A
N
ASN
288
A
O
LEU
284
A
O
LEU
291
A
N
ALA
154
A
N
ALA
161
A
N
GLU
151
A
N
GLU
158
A
O
ARG
253
A
O
ARG
260
A
N
ILE
250
A
N
ILE
257
A
O
ARG
261
A
O
ARG
268
A
N
LEU
266
A
N
LEU
273
A
O
ARG
430
A
O
ARG
437
A
O
ILE
429
A
O
ILE
436
A
N
TYR
354
A
N
TYR
361
A
N
THR
351
A
N
THR
358
A
O
THR
404
A
O
THR
411
1
A
CG
LYS
2
A
CG
LYS
9
1
Y
1
A
CD
LYS
2
A
CD
LYS
9
1
Y
1
A
CE
LYS
2
A
CE
LYS
9
1
Y
1
A
NZ
LYS
2
A
NZ
LYS
9
1
Y
1
A
CG
ARG
23
A
CG
ARG
30
1
Y
1
A
CD
ARG
23
A
CD
ARG
30
1
Y
1
A
NE
ARG
23
A
NE
ARG
30
1
Y
1
A
CZ
ARG
23
A
CZ
ARG
30
1
Y
1
A
NH1
ARG
23
A
NH1
ARG
30
1
Y
1
A
NH2
ARG
23
A
NH2
ARG
30
1
Y
1
A
CG
ARG
38
A
CG
ARG
45
1
Y
1
A
CD
ARG
38
A
CD
ARG
45
1
Y
1
A
NE
ARG
38
A
NE
ARG
45
1
Y
1
A
CZ
ARG
38
A
CZ
ARG
45
1
Y
1
A
NH1
ARG
38
A
NH1
ARG
45
1
Y
1
A
NH2
ARG
38
A
NH2
ARG
45
1
Y
1
A
CG
LYS
49
A
CG
LYS
56
1
Y
1
A
CD
LYS
49
A
CD
LYS
56
1
Y
1
A
CE
LYS
49
A
CE
LYS
56
1
Y
1
A
NZ
LYS
49
A
NZ
LYS
56
1
Y
1
A
CG
GLU
51
A
CG
GLU
58
1
Y
1
A
CD
GLU
51
A
CD
GLU
58
1
Y
1
A
OE1
GLU
51
A
OE1
GLU
58
1
Y
1
A
OE2
GLU
51
A
OE2
GLU
58
1
Y
1
A
CG
GLU
71
A
CG
GLU
78
1
Y
1
A
CD
GLU
71
A
CD
GLU
78
1
Y
1
A
OE1
GLU
71
A
OE1
GLU
78
1
Y
1
A
OE2
GLU
71
A
OE2
GLU
78
1
Y
1
A
CG
GLU
113
A
CG
GLU
120
1
Y
1
A
CD
GLU
113
A
CD
GLU
120
1
Y
1
A
OE1
GLU
113
A
OE1
GLU
120
1
Y
1
A
OE2
GLU
113
A
OE2
GLU
120
1
Y
1
A
CG
ASP
177
A
CG
ASP
184
1
Y
1
A
OD1
ASP
177
A
OD1
ASP
184
1
Y
1
A
OD2
ASP
177
A
OD2
ASP
184
1
Y
1
A
CG
LYS
180
A
CG
LYS
187
1
Y
1
A
CD
LYS
180
A
CD
LYS
187
1
Y
1
A
CE
LYS
180
A
CE
LYS
187
1
Y
1
A
NZ
LYS
180
A
NZ
LYS
187
1
Y
1
A
CG
GLU
255
A
CG
GLU
262
1
Y
1
A
CD
GLU
255
A
CD
GLU
262
1
Y
1
A
OE1
GLU
255
A
OE1
GLU
262
1
Y
1
A
OE2
GLU
255
A
OE2
GLU
262
1
Y
1
A
CG
ARG
362
A
CG
ARG
369
1
Y
1
A
CD
ARG
362
A
CD
ARG
369
1
Y
1
A
NE
ARG
362
A
NE
ARG
369
1
Y
1
A
CZ
ARG
362
A
CZ
ARG
369
1
Y
1
A
NH1
ARG
362
A
NH1
ARG
369
1
Y
1
A
NH2
ARG
362
A
NH2
ARG
369
1
Y
1
A
CG
LYS
386
A
CG
LYS
393
1
Y
1
A
CD
LYS
386
A
CD
LYS
393
1
Y
1
A
CE
LYS
386
A
CE
LYS
393
1
Y
1
A
NZ
LYS
386
A
NZ
LYS
393
1
Y
1
A
CG
GLU
393
A
CG
GLU
400
1
Y
1
A
CD
GLU
393
A
CD
GLU
400
1
Y
1
A
OE1
GLU
393
A
OE1
GLU
400
1
Y
1
A
OE2
GLU
393
A
OE2
GLU
400
1
Y
1
A
CG
LYS
407
A
CG
LYS
414
1
Y
1
A
CD
LYS
407
A
CD
LYS
414
1
Y
1
A
CE
LYS
407
A
CE
LYS
414
1
Y
1
A
NZ
LYS
407
A
NZ
LYS
414
1
Y
1
A
CG
ASP
420
A
CG
ASP
427
1
Y
1
A
OD1
ASP
420
A
OD1
ASP
427
1
Y
1
A
OD2
ASP
420
A
OD2
ASP
427
1
Y
1
A
CG
LYS
425
A
CG
LYS
432
1
Y
1
A
CD
LYS
425
A
CD
LYS
432
1
Y
1
A
CE
LYS
425
A
CE
LYS
432
1
Y
1
A
NZ
LYS
425
A
NZ
LYS
432
1
Y
1
A
GLU
-6
A
GLU
1
1
Y
1
A
ASN
-5
A
ASN
2
1
Y
1
A
LEU
-4
A
LEU
3
1
Y
1
A
TYR
-3
A
TYR
4
1
Y
1
A
ASP
361
A
ASP
368
1
Y
1
A
GLU
387
A
GLU
394
1
Y
1
A
PRO
388
A
PRO
395
1
Y
1
A
ALA
389
A
ALA
396
1
Y
1
A
GLU
390
A
GLU
397
1
Y
1
A
GLY
391
A
GLY
398
1
Y
1
A
GLU
392
A
GLU
399
1
Y
1
A
ALA
436
A
ALA
443
1
Y
1
A
LYS
437
A
LYS
444
1
Y
1
A
A
O
O
HOH
HOH
549
550
2.15
1
A
A
CG
CD
GLU
GLU
240
240
0.107
0.015
1.515
1.622
N
1
A
LEU
11
-129.15
-83.05
1
A
PHE
127
-149.92
28.58
1
A
GLN
218
-143.79
54.41
1
A
GLN
385
-113.90
78.90
43.800
-0.010
0.000
0.000
-0.010
0.000
0.020
0.944
0.922
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
U VALUES : WITH TLS ADDED
0.256
0.217
0.219
2.150
46.760
1493
29337
5.100
99.820
13.271
0.156
RANDOM
1
THROUGHOUT
0.00
0.194
0.800
0.800
1.400
MAXIMUM LIKELIHOOD
MASK
2.150
46.760
113
3330
15
0
3202
0.011
0.022
3271
1.252
1.977
4456
5.686
5.000
432
36.510
23.359
131
16.479
15.000
523
19.497
15.000
28
0.077
0.200
540
0.005
0.021
2439
0.393
1.500
2139
0.716
2.000
3418
1.583
3.000
1132
2.411
4.500
1036
0.313
0.272
2.206
113
2000
2113
20
100.000
2.150
50.000
3MTJ
29384
0.088
1.787
1
8.800
3.900
99.800
0.670
2.15
2.23
2876
0.966
4.00
100.00
0.422
2.23
2.32
2869
1.166
3.90
100.00
0.351
2.32
2.42
2882
0.991
3.90
100.00
0.278
2.42
2.55
2876
1.024
4.00
100.00
0.200
2.55
2.71
2919
1.092
3.90
100.00
0.140
2.71
2.92
2907
1.217
3.90
100.00
0.093
2.92
3.21
2931
1.456
3.90
100.00
0.065
3.21
3.68
2941
1.979
3.90
99.90
0.059
3.68
4.63
3003
3.082
3.80
99.80
0.053
4.63
50.00
3180
5.067
3.60
98.00
data reduction
Zbyszek Otwinowski
zbyszek@mix.swmed.edu
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm
DENZO
package
data scaling
Zbyszek Otwinowski
zbyszek@mix.swmed.edu
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm
SCALEPACK
package
refinement
Murshudov, G.N.
ccp4@dl.ac.uk
Fortran_77
http://www.ccp4.ac.uk/main.html
REFMAC
program
data extraction
PDB
sw-help@rcsb.rutgers.edu
September 10, 2007
C++
http://pdb.rutgers.edu/software/
PDB_EXTRACT
package
3.004
data collection
SBC-Collect
data reduction
HKL-3000
data scaling
HKL-3000
phasing
SHELX
phasing
MLPHARE
phasing
DM
model building
ARP/wARP
model building
Coot
Homoserine dehydrogenase (E.C.1.1.1.3)
The Crystal Structure of a Homoserine Dehydrogenase from Thiobacillus denitrificans to 2.15A
1
N
N
2
N
N
2
N
N
2
N
N
3
N
N
A
LEU
11
A
LEU
18
HELX_P
A
ASN
25
A
ASN
32
1
1
15
A
ASN
25
A
ASN
32
HELX_P
A
GLY
34
A
GLY
41
1
2
10
A
ASN
46
A
ASN
53
HELX_P
A
GLY
55
A
GLY
62
1
3
10
A
PRO
63
A
PRO
70
HELX_P
A
ASP
68
A
ASP
75
1
4
6
A
PRO
84
A
PRO
91
HELX_P
A
ASN
95
A
ASN
102
1
5
12
A
ASN
103
A
ASN
110
HELX_P
A
GLY
122
A
GLY
129
1
6
20
A
PHE
127
A
PHE
134
HELX_P
A
VAL
131
A
VAL
138
5
7
5
A
PRO
136
A
PRO
143
HELX_P
A
GLU
143
A
GLU
150
1
8
8
A
ASN
158
A
ASN
165
HELX_P
A
GLY
172
A
GLY
179
1
9
15
A
ALA
174
A
ALA
181
HELX_P
A
LEU
185
A
LEU
192
1
10
12
A
PRO
192
A
PRO
199
HELX_P
A
GLU
197
A
GLU
204
1
11
6
A
GLY
198
A
GLY
205
HELX_P
A
GLY
214
A
GLY
221
1
12
17
A
GLN
218
A
GLN
225
HELX_P
A
ALA
222
A
ALA
229
5
13
5
A
THR
231
A
THR
238
HELX_P
A
GLY
242
A
GLY
249
1
14
12
A
LEU
272
A
LEU
279
HELX_P
A
VAL
276
A
VAL
283
5
15
5
A
GLY
301
A
GLY
308
HELX_P
A
ASP
323
A
ASP
330
1
16
23
A
GLN
334
A
GLN
341
HELX_P
A
LEU
338
A
LEU
345
5
17
5
A
PRO
345
A
PRO
352
HELX_P
A
ALA
348
A
ALA
355
5
18
4
A
PRO
363
A
PRO
370
HELX_P
A
SER
376
A
SER
383
1
19
14
A
GLU
406
A
GLU
413
HELX_P
A
GLU
417
A
GLU
424
1
20
12
covale
1.326
A
GLY
0
A
C
GLY
7
1_555
A
MSE
1
A
N
MSE
8
1_555
covale
1.335
A
MSE
1
A
C
MSE
8
1_555
A
LYS
2
A
N
LYS
9
1_555
covale
1.337
A
VAL
89
A
C
VAL
96
1_555
A
MSE
90
A
N
MSE
97
1_555
covale
1.335
A
MSE
90
A
C
MSE
97
1_555
A
GLN
91
A
N
GLN
98
1_555
covale
1.323
A
VAL
123
A
C
VAL
130
1_555
A
MSE
124
A
N
MSE
131
1_555
covale
1.330
A
MSE
124
A
C
MSE
131
1_555
A
VAL
125
A
N
VAL
132
1_555
covale
1.332
A
GLU
167
A
C
GLU
174
1_555
A
MSE
168
A
N
MSE
175
1_555
covale
1.328
A
MSE
168
A
C
MSE
175
1_555
A
ARG
169
A
N
ARG
176
1_555
covale
1.332
A
PRO
216
A
C
PRO
223
1_555
A
MSE
217
A
N
MSE
224
1_555
covale
1.324
A
MSE
217
A
C
MSE
224
1_555
A
GLN
218
A
N
GLN
225
1_555
covale
1.332
A
ALA
279
A
C
ALA
286
1_555
A
MSE
280
A
N
MSE
287
1_555
covale
1.335
A
MSE
280
A
C
MSE
287
1_555
A
ASN
281
A
N
ASN
288
1_555
covale
1.330
A
PRO
345
A
C
PRO
352
1_555
A
MSE
346
A
N
MSE
353
1_555
covale
1.333
A
MSE
346
A
C
MSE
353
1_555
A
GLU
347
A
N
GLU
354
1_555
covale
1.325
A
ALA
382
A
C
ALA
389
1_555
A
MSE
383
A
N
MSE
390
1_555
covale
1.326
A
MSE
383
A
C
MSE
390
1_555
A
VAL
384
A
N
VAL
391
1_555
covale
1.329
A
VAL
426
A
C
VAL
433
1_555
A
MSE
427
A
N
MSE
434
1_555
covale
1.331
A
MSE
427
A
C
MSE
434
1_555
A
ARG
428
A
N
ARG
435
1_555
OXIDOREDUCTASE
Rossmann-fold, PSI, MCSG, Structural Genomics, Midwest Center for Structural Genomics, Protein Structure Initiative, OXIDOREDUCTASE
A
GLU
83
A
GLU
90
1
A
PRO
84
A
PRO
91
3.92
Q3SKI5_THIDA
UNP
1
1
Q3SKI5
MKPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAGGLPLTTNPFDVVDDPEIDIVVELIG
GLEPARELVMQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVMVTFEAAVAGGIPIIKALREGLTANRIEWLAGIINGT
SNFILSEMRDKGAAFDDVLKEAQRLGYAEADPTFDIEGIDAAHKLTILSAIAFGIPMQFERAYTEGISQLTREDVRYAEE
LGYRIKLLGIARRAENGIELRVHPTLIPERRLIANVDGAMNAVLVKGDAVGPTLYYGAGAGSEPTASAVVADLVDVTRLH
TADPHHRVPHLAFQPDQLADTPILPMEAVRTAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILL
THVTLEKNVNAAIAKIEALDAVAGKVMRIRLEDLGAK
1
437
3MTJ
1
437
Q3SKI5
A
1
8
444
1
expression tag
GLU
-6
3MTJ
A
Q3SKI5
UNP
1
1
expression tag
ASN
-5
3MTJ
A
Q3SKI5
UNP
2
1
expression tag
LEU
-4
3MTJ
A
Q3SKI5
UNP
3
1
expression tag
TYR
-3
3MTJ
A
Q3SKI5
UNP
4
1
expression tag
PHE
-2
3MTJ
A
Q3SKI5
UNP
5
1
expression tag
GLN
-1
3MTJ
A
Q3SKI5
UNP
6
1
expression tag
GLY
0
3MTJ
A
Q3SKI5
UNP
7
6
6
8
parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
LEU
59
A
LEU
66
A
THR
60
A
THR
67
A
ILE
37
A
ILE
44
A
ALA
43
A
ALA
50
A
ILE
4
A
ILE
11
A
LEU
9
A
LEU
16
A
ILE
74
A
ILE
81
A
GLU
77
A
GLU
84
A
HIS
98
A
HIS
105
A
THR
101
A
THR
108
A
VAL
125
A
VAL
132
A
THR
126
A
THR
133
A
TYR
223
A
TYR
230
A
THR
224
A
THR
231
A
ILE
258
A
ILE
265
A
PRO
268
A
PRO
275
A
MSE
427
A
MSE
434
A
LEU
431
A
LEU
438
A
ARG
350
A
ARG
357
A
ALA
359
A
ALA
366
A
VAL
395
A
VAL
402
A
THR
401
A
THR
408
A
ILE
380
A
ILE
387
A
GLN
385
A
GLN
392
A
GLY
291
A
GLY
298
A
ALA
298
A
ALA
305
A
MSE
280
A
MSE
287
A
GLY
287
A
GLY
294
A
ILE
150
A
ILE
157
A
ILE
156
A
ILE
163
A
TYR
243
A
TYR
250
A
ARG
253
A
ARG
260
A
ILE
258
A
ILE
265
A
PRO
268
A
PRO
275
A
MSE
427
A
MSE
434
A
LEU
431
A
LEU
438
A
ARG
350
A
ARG
357
A
ALA
359
A
ALA
366
A
THR
404
A
THR
411
A
LEU
405
A
LEU
412
BINDING SITE FOR RESIDUE SO4 A 438
Software
3
BINDING SITE FOR RESIDUE SO4 A 439
Software
10
BINDING SITE FOR RESIDUE SO4 A 440
Software
5
A
ARG
35
A
ARG
42
3
1_555
A
HIS
320
A
HIS
327
3
1_555
A
HOH
543
E
HOH
3
1_555
A
GLN
119
A
GLN
126
10
1_555
A
HIS
326
A
HIS
333
10
1_555
A
PRO
329
A
PRO
336
10
1_555
A
HIS
330
A
HIS
337
10
1_555
A
LEU
331
A
LEU
338
10
1_555
A
GLN
334
A
GLN
341
10
1_555
A
HOH
469
E
HOH
10
1_555
A
HOH
505
E
HOH
10
6_555
A
HOH
510
E
HOH
10
1_555
A
HOH
527
E
HOH
10
1_555
A
ARG
252
A
ARG
259
5
1_555
A
ALA
254
A
ALA
261
5
1_555
A
GLU
255
A
GLU
262
5
1_555
A
ARG
350
A
ARG
357
5
1_555
A
HOH
473
E
HOH
5
1_555
94
P 42 21 2