0.018716 0.000000 0.000000 0.000000 0.018622 0.000000 0.000000 0.000000 0.012225 0.00000 0.00000 0.00000 Babault, N. Cordier, F. Lafage, M. Cockburn, J. Haouz, A. Rey, F.A. Delepierre, M. Buc, H. Lafon, M. Wolff, N. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 53.430 53.700 81.800 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N C N 138 N O N 139 N C N 140 N O N 141 N C N 142 N O N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N N N 152 S C N 153 N C N 154 N O N 155 N C Y 156 N C Y 157 N N Y 158 N C Y 159 N C Y 160 N N N 161 N O N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N O N 173 N H N 174 N H N 175 N N N 176 S C N 177 N C N 178 N O N 179 S C N 180 N C N 181 N C N 182 N C N 183 N O N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N N N 198 S C N 199 N C N 200 N O N 201 N C N 202 N C N 203 N C N 204 N C N 205 N O N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N N N 220 S C N 221 N C N 222 N O N 223 N C N 224 N C N 225 N C N 226 N C N 227 N N N 228 N O N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N N N 245 S C N 246 N C N 247 N O N 248 N C N 249 N C N 250 N S N 251 N C N 252 N O N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N N N 265 S C N 266 N C N 267 N O N 268 N C Y 269 N C Y 270 N C Y 271 N C Y 272 N C Y 273 N C Y 274 N C N 275 N O N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N N N 288 S C N 289 N C N 290 N O N 291 N C N 292 N C N 293 N C N 294 N O N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 N C N 309 N O N 310 N O N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N N N 319 S C N 320 N C N 321 N O N 322 R C N 323 N O N 324 N C N 325 N O N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N N N 336 S C N 337 N C N 338 N O N 339 N C Y 340 N C Y 341 N C Y 342 N C Y 343 N N Y 344 N C Y 345 N C Y 346 N C Y 347 N C Y 348 N C N 349 N O N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N N N 363 S C N 364 N C N 365 N O N 366 N C Y 367 N C Y 368 N C Y 369 N C Y 370 N C Y 371 N C Y 372 N C N 373 N O N 374 N O N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N N N 387 S C N 388 N C N 389 N O N 390 N C N 391 N C N 392 N C N 393 N O N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing Y 153 N sing Y 154 N doub Y 155 N doub N 156 N sing Y 157 N sing N 158 N sing Y 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N doub N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N doub N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N doub N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N doub N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N doub N 257 N sing N 258 N sing N 259 N sing N 260 N sing Y 261 N doub Y 262 N sing Y 263 N sing N 264 N sing Y 265 N doub N 266 N sing Y 267 N doub N 268 N sing Y 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N doub N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N doub N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N doub N 326 N sing N 327 N sing N 328 N sing N 329 N sing Y 330 N doub Y 331 N sing Y 332 N sing N 333 N sing Y 334 N doub Y 335 N sing Y 336 N sing N 337 N sing Y 338 N sing Y 339 N doub N 340 N sing Y 341 N doub N 342 N sing Y 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N doub N 354 N sing N 355 N sing N 356 N sing N 357 N sing Y 358 N doub Y 359 N sing Y 360 N sing N 361 N sing Y 362 N doub N 363 N sing Y 364 N doub N 365 N sing Y 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N doub N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing UK Structure STRUE6 2005 0969-2126 19 1518 1524 10.1016/j.str.2011.07.007 22000519 Peptides Targeting the PDZ Domain of PTPN4 Are Efficient Inducers of Glioblastoma Cell Death. 2011 10.2210/pdb3nfk/pdb pdb_00003nfk 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 BI-MORPH MIRRORS CCD 2009-05-29 ADSC QUANTUM 315r CRYOGENICALLY COOLED MONOCHROMATOR CRYSTAL SINGLE WAVELENGTH M x-ray 1 0.918 1.0 PROXIMA 1 SOLEIL 0.918 SYNCHROTRON SOLEIL BEAMLINE PROXIMA 1 11694.363 Tyrosine-protein phosphatase non-receptor type 4 PDZ domain (UNP residues 499-604) 2 man polymer 1476.572 Glycoprotein G UNP residues 512-524 2 syn polymer 92.094 GLYCEROL 2 syn non-polymer 18.015 water 181 nat water Protein-tyrosine phosphatase MEG1, PTPase-MEG1, MEG no no GSSPEKPTPNGGIPHDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEH THDQVVLFIKASCERHSGELMLLVRPN GSSPEKPTPNGGIPHDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEH THDQVVLFIKASCERHSGELMLLVRPN A,B polypeptide(L) no no SWESHKSGGETRL SWESHKSGGETRL C,D polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample PTPN4 9606 Homo sapiens 469008 Escherichia coli BL21 (DE3) star plasmid pDEST15 1 2.23 44.78 VAPOR DIFFUSION, HANGING DROP 24% PEG 1500, 20% Glycerol, VAPOR DIFFUSION, HANGING DROP, temperature 291K 291 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_ref_seq_dif struct_site repository Initial release Database references Data collection Database references Derived calculations Refinement description 1 0 2011-08-24 1 1 2011-11-30 1 2 2023-09-06 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Crystal structure of PTPN4-PDZ Solution structure of PTPN4-PDZ RCSB Y RCSB 2010-06-10 REL REL GOL GLYCEROL HOH water Cyto13-att peptide has been chemically synthetized. The sequence occurs naturally in rabies virus G protein 11292 Rabies virus sample 2VPH PDB ENTRY 2VPH PDB experimental model GOL 1 3 GOL GOL 1 A GOL 1 3 GOL GOL 605 A HOH 2 4 HOH HOH 2 A HOH 4 4 HOH HOH 4 A HOH 5 4 HOH HOH 5 A HOH 6 4 HOH HOH 6 A HOH 8 4 HOH HOH 8 A HOH 9 4 HOH HOH 9 A HOH 10 4 HOH HOH 10 A HOH 11 4 HOH HOH 11 A HOH 13 4 HOH HOH 13 A HOH 14 4 HOH HOH 14 A HOH 15 4 HOH HOH 15 A HOH 17 4 HOH HOH 17 A HOH 18 4 HOH HOH 18 A HOH 19 4 HOH HOH 19 A HOH 20 4 HOH HOH 20 A HOH 22 4 HOH HOH 22 A HOH 23 4 HOH HOH 23 A HOH 24 4 HOH HOH 24 A HOH 25 4 HOH HOH 25 A HOH 26 4 HOH HOH 26 A HOH 27 4 HOH HOH 27 A HOH 28 4 HOH HOH 28 A HOH 29 4 HOH HOH 29 A HOH 31 4 HOH HOH 31 A HOH 32 4 HOH HOH 32 A HOH 34 4 HOH HOH 34 A HOH 36 4 HOH HOH 36 A HOH 37 4 HOH HOH 37 A HOH 40 4 HOH HOH 40 A HOH 42 4 HOH HOH 42 A HOH 49 4 HOH HOH 49 A HOH 50 4 HOH HOH 50 A HOH 55 4 HOH HOH 55 A HOH 59 4 HOH HOH 59 A HOH 61 4 HOH HOH 61 A HOH 66 4 HOH HOH 66 A HOH 72 4 HOH HOH 72 A HOH 73 4 HOH HOH 73 A HOH 74 4 HOH HOH 74 A HOH 75 4 HOH HOH 75 A HOH 79 4 HOH HOH 79 A HOH 88 4 HOH HOH 88 A HOH 91 4 HOH HOH 91 A HOH 94 4 HOH HOH 94 A HOH 96 4 HOH HOH 96 A HOH 98 4 HOH HOH 98 A HOH 99 4 HOH HOH 99 A HOH 101 4 HOH HOH 101 A HOH 103 4 HOH HOH 103 A HOH 104 4 HOH HOH 104 A HOH 105 4 HOH HOH 105 A HOH 106 4 HOH HOH 106 A HOH 108 4 HOH HOH 108 A HOH 109 4 HOH HOH 109 A HOH 111 4 HOH HOH 111 A HOH 113 4 HOH HOH 113 A HOH 117 4 HOH HOH 117 A HOH 125 4 HOH HOH 125 A HOH 127 4 HOH HOH 127 A HOH 130 4 HOH HOH 130 A HOH 131 4 HOH HOH 131 A HOH 133 4 HOH HOH 133 A HOH 134 4 HOH HOH 134 A HOH 137 4 HOH HOH 137 A HOH 138 4 HOH HOH 138 A HOH 139 4 HOH HOH 139 A HOH 142 4 HOH HOH 142 A HOH 150 4 HOH HOH 150 A HOH 151 4 HOH HOH 151 A HOH 161 4 HOH HOH 161 A HOH 163 4 HOH HOH 163 A HOH 164 4 HOH HOH 164 A HOH 170 4 HOH HOH 170 A HOH 173 4 HOH HOH 173 A HOH 179 4 HOH HOH 179 A HOH 180 4 HOH HOH 180 A HOH 182 4 HOH HOH 182 A HOH 187 4 HOH HOH 187 A HOH 188 4 HOH HOH 188 A HOH 196 4 HOH HOH 196 A HOH 199 4 HOH HOH 199 A HOH 203 4 HOH HOH 203 A HOH 205 4 HOH HOH 205 A HOH 212 4 HOH HOH 212 A HOH 216 4 HOH HOH 216 A HOH 221 4 HOH HOH 221 A HOH 249 4 HOH HOH 249 A HOH 250 4 HOH HOH 250 A HOH 256 4 HOH HOH 256 A HOH 258 4 HOH HOH 258 A HOH 262 4 HOH HOH 262 A HOH 266 4 HOH HOH 266 A HOH 280 4 HOH HOH 280 A HOH 303 4 HOH HOH 303 A HOH 307 4 HOH HOH 307 A HOH 311 4 HOH HOH 311 A HOH 315 4 HOH HOH 315 A HOH 318 4 HOH HOH 318 A HOH 323 4 HOH HOH 323 A HOH 12 4 HOH HOH 12 B HOH 16 4 HOH HOH 16 B HOH 30 4 HOH HOH 30 B HOH 33 4 HOH HOH 33 B HOH 35 4 HOH HOH 35 B HOH 38 4 HOH HOH 38 B HOH 39 4 HOH HOH 39 B HOH 43 4 HOH HOH 43 B HOH 44 4 HOH HOH 44 B HOH 47 4 HOH HOH 47 B HOH 48 4 HOH HOH 48 B HOH 52 4 HOH HOH 52 B HOH 57 4 HOH HOH 57 B HOH 60 4 HOH HOH 60 B HOH 63 4 HOH HOH 63 B HOH 64 4 HOH HOH 64 B HOH 71 4 HOH HOH 71 B HOH 77 4 HOH HOH 77 B HOH 78 4 HOH HOH 78 B HOH 80 4 HOH HOH 80 B HOH 82 4 HOH HOH 82 B HOH 83 4 HOH HOH 83 B HOH 84 4 HOH HOH 84 B HOH 85 4 HOH HOH 85 B HOH 89 4 HOH HOH 89 B HOH 90 4 HOH HOH 90 B HOH 93 4 HOH HOH 93 B HOH 95 4 HOH HOH 95 B HOH 110 4 HOH HOH 110 B HOH 112 4 HOH HOH 112 B HOH 115 4 HOH HOH 115 B HOH 116 4 HOH HOH 116 B HOH 122 4 HOH HOH 122 B HOH 123 4 HOH HOH 123 B HOH 129 4 HOH HOH 129 B HOH 136 4 HOH HOH 136 B HOH 147 4 HOH HOH 147 B HOH 149 4 HOH HOH 149 B HOH 152 4 HOH HOH 152 B HOH 158 4 HOH HOH 158 B HOH 159 4 HOH HOH 159 B HOH 167 4 HOH HOH 167 B HOH 178 4 HOH HOH 178 B HOH 181 4 HOH HOH 181 B HOH 185 4 HOH HOH 185 B HOH 192 4 HOH HOH 192 B HOH 198 4 HOH HOH 198 B HOH 217 4 HOH HOH 217 B HOH 224 4 HOH HOH 224 B HOH 226 4 HOH HOH 226 B HOH 298 4 HOH HOH 298 B HOH 302 4 HOH HOH 302 B HOH 310 4 HOH HOH 310 B HOH 312 4 HOH HOH 312 B HOH 313 4 HOH HOH 313 B HOH 314 4 HOH HOH 314 B HOH 316 4 HOH HOH 316 B HOH 317 4 HOH HOH 317 B HOH 322 4 HOH HOH 322 B HOH 3 4 HOH HOH 14 C HOH 7 4 HOH HOH 15 C HOH 21 4 HOH HOH 21 C HOH 41 4 HOH HOH 41 C HOH 45 4 HOH HOH 45 C HOH 53 4 HOH HOH 53 C HOH 54 4 HOH HOH 54 C HOH 58 4 HOH HOH 58 C HOH 65 4 HOH HOH 65 C HOH 67 4 HOH HOH 67 C HOH 69 4 HOH HOH 69 C HOH 81 4 HOH HOH 81 C HOH 87 4 HOH HOH 87 C HOH 92 4 HOH HOH 92 C HOH 107 4 HOH HOH 107 C HOH 118 4 HOH HOH 118 C HOH 191 4 HOH HOH 191 C HOH 51 4 HOH HOH 51 D HOH 56 4 HOH HOH 56 D HOH 68 4 HOH HOH 68 D HOH 76 4 HOH HOH 76 D HOH 296 4 HOH HOH 296 D HOH 309 4 HOH HOH 309 D n 1 498 A n 2 499 A n 3 500 A n 4 501 A n 5 502 A n 6 503 A n 7 504 A n 8 505 A n 9 506 A n 10 507 A n 11 508 A n 12 509 A n 13 510 A n 14 511 A n 15 512 A ASP 513 n 16 ASP 513 A ASN 514 n 17 ASN 514 A LEU 515 n 18 LEU 515 A VAL 516 n 19 VAL 516 A LEU 517 n 20 LEU 517 A ILE 518 n 21 ILE 518 A ARG 519 n 22 ARG 519 A MET 520 n 23 MET 520 A LYS 521 n 24 LYS 521 A PRO 522 n 25 PRO 522 A ASP 523 n 26 ASP 523 A GLU 524 n 27 GLU 524 A ASN 525 n 28 ASN 525 A GLY 526 n 29 GLY 526 A ARG 527 n 30 ARG 527 A PHE 528 n 31 PHE 528 A GLY 529 n 32 GLY 529 A PHE 530 n 33 PHE 530 A ASN 531 n 34 ASN 531 A VAL 532 n 35 VAL 532 A LYS 533 n 36 LYS 533 A GLY 534 n 37 GLY 534 A GLY 535 n 38 GLY 535 A TYR 536 n 39 TYR 536 A ASP 537 n 40 ASP 537 A GLN 538 n 41 GLN 538 A LYS 539 n 42 LYS 539 A MET 540 n 43 MET 540 A PRO 541 n 44 PRO 541 A VAL 542 n 45 VAL 542 A ILE 543 n 46 ILE 543 A VAL 544 n 47 VAL 544 A SER 545 n 48 SER 545 A ARG 546 n 49 ARG 546 A VAL 547 n 50 VAL 547 A ALA 548 n 51 ALA 548 A PRO 549 n 52 PRO 549 A GLY 550 n 53 GLY 550 A THR 551 n 54 THR 551 A PRO 552 n 55 PRO 552 A ALA 553 n 56 ALA 553 A ASP 554 n 57 ASP 554 A LEU 555 n 58 LEU 555 A CYS 556 n 59 CYS 556 A VAL 557 n 60 VAL 557 A PRO 558 n 61 PRO 558 A ARG 559 n 62 ARG 559 A LEU 560 n 63 LEU 560 A ASN 561 n 64 ASN 561 A GLU 562 n 65 GLU 562 A GLY 563 n 66 GLY 563 A ASP 564 n 67 ASP 564 A GLN 565 n 68 GLN 565 A VAL 566 n 69 VAL 566 A VAL 567 n 70 VAL 567 A LEU 568 n 71 LEU 568 A ILE 569 n 72 ILE 569 A ASN 570 n 73 ASN 570 A GLY 571 n 74 GLY 571 A ARG 572 n 75 ARG 572 A ASP 573 n 76 ASP 573 A ILE 574 n 77 ILE 574 A ALA 575 n 78 ALA 575 A GLU 576 n 79 GLU 576 A HIS 577 n 80 HIS 577 A THR 578 n 81 THR 578 A HIS 579 n 82 HIS 579 A ASP 580 n 83 ASP 580 A GLN 581 n 84 GLN 581 A VAL 582 n 85 VAL 582 A VAL 583 n 86 VAL 583 A LEU 584 n 87 LEU 584 A PHE 585 n 88 PHE 585 A ILE 586 n 89 ILE 586 A LYS 587 n 90 LYS 587 A ALA 588 n 91 ALA 588 A SER 589 n 92 SER 589 A CYS 590 n 93 CYS 590 A GLU 591 n 94 GLU 591 A ARG 592 n 95 ARG 592 A HIS 593 n 96 HIS 593 A SER 594 n 97 SER 594 A GLY 595 n 98 GLY 595 A GLU 596 n 99 GLU 596 A LEU 597 n 100 LEU 597 A MET 598 n 101 MET 598 A LEU 599 n 102 LEU 599 A LEU 600 n 103 LEU 600 A VAL 601 n 104 VAL 601 A ARG 602 n 105 ARG 602 A PRO 603 n 106 PRO 603 A ASN 604 n 107 ASN 604 A n 1 498 B n 2 499 B n 3 500 B n 4 501 B n 5 502 B n 6 503 B n 7 504 B n 8 505 B n 9 506 B n 10 507 B n 11 508 B n 12 509 B n 13 510 B n 14 511 B HIS 512 n 15 HIS 512 B ASP 513 n 16 ASP 513 B ASN 514 n 17 ASN 514 B LEU 515 n 18 LEU 515 B VAL 516 n 19 VAL 516 B LEU 517 n 20 LEU 517 B ILE 518 n 21 ILE 518 B ARG 519 n 22 ARG 519 B MET 520 n 23 MET 520 B LYS 521 n 24 LYS 521 B PRO 522 n 25 PRO 522 B ASP 523 n 26 ASP 523 B GLU 524 n 27 GLU 524 B ASN 525 n 28 ASN 525 B GLY 526 n 29 GLY 526 B ARG 527 n 30 ARG 527 B PHE 528 n 31 PHE 528 B GLY 529 n 32 GLY 529 B PHE 530 n 33 PHE 530 B ASN 531 n 34 ASN 531 B VAL 532 n 35 VAL 532 B LYS 533 n 36 LYS 533 B GLY 534 n 37 GLY 534 B GLY 535 n 38 GLY 535 B TYR 536 n 39 TYR 536 B ASP 537 n 40 ASP 537 B GLN 538 n 41 GLN 538 B LYS 539 n 42 LYS 539 B MET 540 n 43 MET 540 B PRO 541 n 44 PRO 541 B VAL 542 n 45 VAL 542 B ILE 543 n 46 ILE 543 B VAL 544 n 47 VAL 544 B SER 545 n 48 SER 545 B ARG 546 n 49 ARG 546 B VAL 547 n 50 VAL 547 B ALA 548 n 51 ALA 548 B PRO 549 n 52 PRO 549 B GLY 550 n 53 GLY 550 B THR 551 n 54 THR 551 B PRO 552 n 55 PRO 552 B ALA 553 n 56 ALA 553 B ASP 554 n 57 ASP 554 B LEU 555 n 58 LEU 555 B CYS 556 n 59 CYS 556 B VAL 557 n 60 VAL 557 B PRO 558 n 61 PRO 558 B ARG 559 n 62 ARG 559 B LEU 560 n 63 LEU 560 B ASN 561 n 64 ASN 561 B GLU 562 n 65 GLU 562 B GLY 563 n 66 GLY 563 B ASP 564 n 67 ASP 564 B GLN 565 n 68 GLN 565 B VAL 566 n 69 VAL 566 B VAL 567 n 70 VAL 567 B LEU 568 n 71 LEU 568 B ILE 569 n 72 ILE 569 B ASN 570 n 73 ASN 570 B GLY 571 n 74 GLY 571 B ARG 572 n 75 ARG 572 B ASP 573 n 76 ASP 573 B ILE 574 n 77 ILE 574 B ALA 575 n 78 ALA 575 B GLU 576 n 79 GLU 576 B HIS 577 n 80 HIS 577 B THR 578 n 81 THR 578 B HIS 579 n 82 HIS 579 B ASP 580 n 83 ASP 580 B GLN 581 n 84 GLN 581 B VAL 582 n 85 VAL 582 B VAL 583 n 86 VAL 583 B LEU 584 n 87 LEU 584 B PHE 585 n 88 PHE 585 B ILE 586 n 89 ILE 586 B LYS 587 n 90 LYS 587 B ALA 588 n 91 ALA 588 B SER 589 n 92 SER 589 B CYS 590 n 93 CYS 590 B GLU 591 n 94 GLU 591 B n 95 592 B n 96 593 B SER 594 n 97 SER 594 B GLY 595 n 98 GLY 595 B GLU 596 n 99 GLU 596 B LEU 597 n 100 LEU 597 B MET 598 n 101 MET 598 B LEU 599 n 102 LEU 599 B LEU 600 n 103 LEU 600 B VAL 601 n 104 VAL 601 B ARG 602 n 105 ARG 602 B PRO 603 n 106 PRO 603 B ASN 604 n 107 ASN 604 B SER 1 n 1 SER 1 C TRP 2 n 2 TRP 2 C GLU 3 n 3 GLU 3 C SER 4 n 4 SER 4 C HIS 5 n 5 HIS 5 C LYS 6 n 6 LYS 6 C SER 7 n 7 SER 7 C GLY 8 n 8 GLY 8 C GLY 9 n 9 GLY 9 C GLU 10 n 10 GLU 10 C THR 11 n 11 THR 11 C ARG 12 n 12 ARG 12 C LEU 13 n 13 LEU 13 C n 1 1 D n 2 2 D n 3 3 D n 4 4 D n 5 5 D n 6 6 D n 7 7 D n 8 8 D GLY 9 n 9 GLY 9 D GLU 10 n 10 GLU 10 D THR 11 n 11 THR 11 D ARG 12 n 12 ARG 12 D LEU 13 n 13 LEU 13 D 1.0555 0.0333 -0.0672 1.2897 -0.0627 0.6118 -0.0058 0.0209 0.0121 -0.0172 0.0061 -0.1331 0.0005 0.0419 -0.0003 -0.0748 0.0017 -0.0011 -0.0464 0.0080 -0.0379 refined 33.1435 -18.5056 15.3124 X-RAY DIFFRACTION 2.1534 -0.8889 -1.1209 3.4346 -0.2264 1.7466 0.0393 0.1537 0.0018 -0.1086 -0.0241 0.2286 0.0717 -0.1022 -0.0152 -0.0200 -0.0048 -0.0143 -0.0039 -0.0058 0.0056 refined 24.4260 -9.4236 18.0277 X-RAY DIFFRACTION 1.4659 -1.3715 0.2031 3.2971 -1.0075 1.8874 -0.0566 -0.0667 0.0731 0.0211 0.1581 0.0588 -0.1304 -0.1310 -0.1014 -0.0365 -0.0055 -0.0006 0.0188 0.0221 -0.0154 refined 27.3935 -1.7889 -5.2299 X-RAY DIFFRACTION 0.0207 0.3334 -0.8913 0.0000 -0.1162 0.3054 -0.0160 -0.0145 0.0308 0.0268 -0.0158 -0.0154 -0.0331 0.0132 0.0318 0.0233 0.0300 -0.0207 0.0082 -0.0216 -0.0320 refined 34.6610 1.0037 2.3660 X-RAY DIFFRACTION A 513 A 604 X-RAY DIFFRACTION 1 { A|513 - A|604 } C 1 C 13 X-RAY DIFFRACTION 2 { C|1 - C|13 } B 512 B 591 X-RAY DIFFRACTION 3 { B|512 - B|591 B|594 - B|604 } B 594 B 604 X-RAY DIFFRACTION 3 { B|512 - B|591 B|594 - B|604 } D 9 D 13 X-RAY DIFFRACTION 4 { D|9 - D|13 } author_and_software_defined_assembly PISA 2 dimeric author_and_software_defined_assembly PISA 2 dimeric software_defined_assembly PISA 4 tetrameric 1220 -2 6040 870 -3 5880 2280 -9 11730 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 3_645 -x+1,y-1/2,-z+1/2 crystal symmetry operation 53.4300000000 -26.8500000000 40.9000000000 A N ILE 518 A N ILE 21 A O LEU 599 A O LEU 102 A O LEU 600 A O LEU 103 A N VAL 567 A N VAL 70 A N ILE 569 A N ILE 72 A O ARG 572 A O ARG 75 A O MET 540 A O MET 43 A N GLY 535 A N GLY 38 A N VAL 532 A N VAL 35 C O THR 11 C O THR 11 C O GLU 10 C O GLU 10 C N SER 7 C N SER 7 B N ILE 518 B N ILE 21 B O LEU 599 B O LEU 102 B O LEU 600 B O LEU 103 B N VAL 567 B N VAL 70 B N ILE 569 B N ILE 72 B O ARG 572 B O ARG 75 B O MET 540 B O MET 43 B N GLY 535 B N GLY 38 B N VAL 532 B N VAL 35 D O THR 11 D O THR 11 1 A CG HIS 593 A CG HIS 96 1 Y 1 A ND1 HIS 593 A ND1 HIS 96 1 Y 1 A CD2 HIS 593 A CD2 HIS 96 1 Y 1 A CE1 HIS 593 A CE1 HIS 96 1 Y 1 A NE2 HIS 593 A NE2 HIS 96 1 Y 1 B CG TYR 536 B CG TYR 39 1 Y 1 B CD1 TYR 536 B CD1 TYR 39 1 Y 1 B CD2 TYR 536 B CD2 TYR 39 1 Y 1 B CE1 TYR 536 B CE1 TYR 39 1 Y 1 B CE2 TYR 536 B CE2 TYR 39 1 Y 1 B CZ TYR 536 B CZ TYR 39 1 Y 1 B OH TYR 536 B OH TYR 39 1 Y 1 B CG MET 598 B CG MET 101 1 Y 1 B SD MET 598 B SD MET 101 1 Y 1 B CE MET 598 B CE MET 101 1 Y 1 A GLY 498 A GLY 1 1 Y 1 A SER 499 A SER 2 1 Y 1 A SER 500 A SER 3 1 Y 1 A PRO 501 A PRO 4 1 Y 1 A GLU 502 A GLU 5 1 Y 1 A LYS 503 A LYS 6 1 Y 1 A PRO 504 A PRO 7 1 Y 1 A THR 505 A THR 8 1 Y 1 A PRO 506 A PRO 9 1 Y 1 A ASN 507 A ASN 10 1 Y 1 A GLY 508 A GLY 11 1 Y 1 A GLY 509 A GLY 12 1 Y 1 A ILE 510 A ILE 13 1 Y 1 A PRO 511 A PRO 14 1 Y 1 A HIS 512 A HIS 15 1 Y 1 B GLY 498 B GLY 1 1 Y 1 B SER 499 B SER 2 1 Y 1 B SER 500 B SER 3 1 Y 1 B PRO 501 B PRO 4 1 Y 1 B GLU 502 B GLU 5 1 Y 1 B LYS 503 B LYS 6 1 Y 1 B PRO 504 B PRO 7 1 Y 1 B THR 505 B THR 8 1 Y 1 B PRO 506 B PRO 9 1 Y 1 B ASN 507 B ASN 10 1 Y 1 B GLY 508 B GLY 11 1 Y 1 B GLY 509 B GLY 12 1 Y 1 B ILE 510 B ILE 13 1 Y 1 B PRO 511 B PRO 14 1 Y 1 B ARG 592 B ARG 95 1 Y 1 B HIS 593 B HIS 96 1 Y 1 D SER 1 D SER 1 1 Y 1 D TRP 2 D TRP 2 1 Y 1 D GLU 3 D GLU 3 1 Y 1 D SER 4 D SER 4 1 Y 1 D HIS 5 D HIS 5 1 Y 1 D LYS 6 D LYS 6 1 Y 1 D SER 7 D SER 7 1 Y 1 D GLY 8 D GLY 8 1 Y 20.78 -1.2203 0.0000 0.0000 0.7572 0.0000 0.4631 0.9495 0.9447 0.2039 0.1921 0.1927 1.43 14.41 2155 44167 42710 5.05 96.70 0.062 RANDOM 1 THROUGHOUT 0.0 MOLECULAR REPLACEMENT PDB ENTRY 2VPH 0.175 1.43 14.41 181 1741 12 0 1548 0.010 1600 2.00 1.14 2160 2.00 579 2.00 47 2.00 232 5.00 1600 20.00 4.10 13.85 201 5.00 1976 4.00 0.2333 0.1853 0.1876 1.47 159 3001 3160 20 5.03 96.70 16.28 1.43 34.37 3NFK 44164 42795 0.068 1 11 3.5 96.9 0.301 1.43 1.51 4.3 6255 1 3.6 98.5 data reduction MOSFLM phasing PHASER refinement BUSTER 2.9.3 data scaling SCALA N Crystal structure of the PTPN4 PDZ domain complexed with the C-terminus of a rabies virus G protein 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N 4 N N 4 N N 4 N N 4 N N A TYR 536 A TYR 39 HELX_P A LYS 539 A LYS 42 5 1 4 A THR 551 A THR 54 HELX_P A CYS 556 A CYS 59 1 2 6 A THR 578 A THR 81 HELX_P A ALA 588 A ALA 91 1 3 11 A SER 589 A SER 92 HELX_P A ARG 592 A ARG 95 5 4 4 B TYR 536 B TYR 39 HELX_P B LYS 539 B LYS 42 5 5 4 B THR 551 B THR 54 HELX_P B CYS 556 B CYS 59 1 6 6 B THR 578 B THR 81 HELX_P B ALA 588 B ALA 91 1 7 11 disulf 2.076 A CYS 590 A SG CYS 93 1_555 B CYS 590 B SG CYS 93 1_555 PROTEIN BINDING PDZ-PDZ-binding site complex, PROTEIN BINDING A VAL 557 A VAL 60 1 A PRO 558 A PRO 61 -11.94 B VAL 557 B VAL 60 1 B PRO 558 B PRO 61 1.24 PTN4_HUMAN UNP 1 499 P29074 SSPEKPTPNGGIPHDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHT HDQVVLFIKASCERHSGELMLLVRPN VGLG_RABVE UNP 2 512 P03524 SWESHKSGGETRL 499 604 3NFK 499 604 P29074 A 1 2 107 499 604 3NFK 499 604 P29074 B 1 2 107 512 524 3NFK 1 13 P03524 C 2 1 13 512 524 3NFK 1 13 P03524 D 2 1 13 1 expression tag GLY 498 3NFK A P29074 UNP 1 2 expression tag GLY 498 3NFK B P29074 UNP 1 4 4 4 3 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A VAL 516 A VAL 19 A MET 520 A MET 23 A LEU 597 A LEU 100 A ARG 602 A ARG 105 A GLN 565 A GLN 68 A ILE 569 A ILE 72 A ARG 572 A ARG 75 A ASP 573 A ASP 76 A MET 540 A MET 43 A VAL 547 A VAL 50 A PHE 530 A PHE 33 A GLY 535 A GLY 38 C GLU 10 C GLU 10 C ARG 12 C ARG 12 C LYS 6 C LYS 6 C SER 7 C SER 7 B VAL 516 B VAL 19 B MET 520 B MET 23 B LEU 597 B LEU 100 B ARG 602 B ARG 105 B GLN 565 B GLN 68 B ILE 569 B ILE 72 B ARG 572 B ARG 75 B ASP 573 B ASP 76 B MET 540 B MET 43 B VAL 547 B VAL 50 B PHE 530 B PHE 33 B GLY 535 B GLY 38 D GLU 10 D GLU 10 D ARG 12 D ARG 12 BINDING SITE FOR RESIDUE GOL A 1 A GOL 1 Software 6 BINDING SITE FOR RESIDUE GOL A 605 A GOL 605 Software 9 A HOH 61 G HOH 6 3_645 A HOH 315 G HOH 6 3_645 A ASP 537 A ASP 40 6 3_645 A PRO 549 A PRO 52 6 1_555 A GLY 550 A GLY 53 6 1_555 B ASP 554 B ASP 57 6 4_445 A HOH 23 G HOH 9 1_555 A HOH 28 G HOH 9 3_645 A VAL 547 A VAL 50 9 1_555 A ARG 559 A ARG 62 9 1_555 A GLU 562 A GLU 65 9 1_555 A ASP 580 A ASP 83 9 3_645 B ASP 580 B ASP 83 9 3_645 C TRP 2 C TRP 2 9 3_645 C HOH 53 I HOH 9 3_645 19 P 21 21 21