0.016471
0.009509
0.000000
0.000000
0.019019
0.000000
0.000000
0.000000
0.020169
0.000000
0.000000
0.000000
Alvarado, J.J.
Betts, L.
Moroco, J.A.
Smithgall, T.E.
Yeh, J.I.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
3
90.000
90.000
120.000
60.714
60.714
49.581
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
285
35455
35461
10.1074/jbc.M110.145102
20810664
Crystal Structure of the Src Family Kinase Hck SH3-SH2 Linker Regulatory Region Supports an SH3-dominant Activation Mechanism.
2010
10.2210/pdb3nhn/pdb
pdb_00003nhn
93
1
CCD
2009-07-07
RIGAKU SATURN 944
mirrors
SINGLE WAVELENGTH
x-ray
1
1.54
1.0
1.54
ROTATING ANODE
RIGAKU FR-E SUPERBRIGHT
22311.906
Tyrosine-protein kinase HCK
2.7.10.2
UNP residues 72-256, Hck-SH3-SH2-Linker fragment
1
man
polymer
18.015
water
35
nat
water
Hemopoietic cell kinase, p59-HCK/p60-HCK
no
no
GIREAGSEDIIVVALYDYEAIHHEDLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVDSLETEEWFFKGISR
KDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGND
GLCQKLSVPCMSSKPQKPWEKDAWELEHHHHHH
GIREAGSEDIIVVALYDYEAIHHEDLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVDSLETEEWFFKGISR
KDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGND
GLCQKLSVPCMSSKPQKPWEKDAWELEHHHHHH
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
HCK
9606
Homo sapiens
562
Escherichia coli
BL21(DE3)Rosetta 2
pET21(a)
1
2.36
47.98
VAPOR DIFFUSION, SITTING DROP
25% (v/v) polyethylene glycol 3,350, 0.15 M KSCN, 0.05 M NaCl, and 1:100 dilution of Hck-SH3-SH2-linker crystal seeds (grown in 25% v/v polyethylene glycol 3,350, 0.1 M Tris pH 8.5, 0.2 M NaCl, VAPOR DIFFUSION, SITTING DROP, temperature 298K
298
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
repository
Initial release
Version format compliance
Refinement description
Data collection
Database references
Refinement description
1
0
2010-09-01
1
1
2011-07-13
1
2
2017-11-08
1
3
2023-09-06
_software.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
RCSB
Y
RCSB
2010-06-14
REL
REL
HOH
water
1QCF
PDB ENTRY 1QCF
PDB
experimental model
HOH
1
2
HOH
HOH
1
A
HOH
2
2
HOH
HOH
2
A
HOH
3
2
HOH
HOH
3
A
HOH
4
2
HOH
HOH
4
A
HOH
5
2
HOH
HOH
5
A
HOH
6
2
HOH
HOH
6
A
HOH
7
2
HOH
HOH
7
A
HOH
8
2
HOH
HOH
8
A
HOH
9
2
HOH
HOH
9
A
HOH
10
2
HOH
HOH
10
A
HOH
11
2
HOH
HOH
11
A
HOH
12
2
HOH
HOH
12
A
HOH
13
2
HOH
HOH
13
A
HOH
14
2
HOH
HOH
14
A
HOH
15
2
HOH
HOH
15
A
HOH
16
2
HOH
HOH
16
A
HOH
17
2
HOH
HOH
17
A
HOH
18
2
HOH
HOH
18
A
HOH
19
2
HOH
HOH
19
A
HOH
20
2
HOH
HOH
20
A
HOH
21
2
HOH
HOH
21
A
HOH
22
2
HOH
HOH
22
A
HOH
23
2
HOH
HOH
23
A
HOH
24
2
HOH
HOH
24
A
HOH
25
2
HOH
HOH
25
A
HOH
26
2
HOH
HOH
26
A
HOH
27
2
HOH
HOH
27
A
HOH
28
2
HOH
HOH
28
A
HOH
29
2
HOH
HOH
29
A
HOH
30
2
HOH
HOH
30
A
HOH
31
2
HOH
HOH
31
A
HOH
32
2
HOH
HOH
32
A
HOH
33
2
HOH
HOH
33
A
HOH
34
2
HOH
HOH
34
A
HOH
35
2
HOH
HOH
35
A
n
1
75
A
n
2
76
A
n
3
77
A
n
4
78
A
n
5
79
A
n
6
80
A
n
7
81
A
n
8
82
A
ASP
83
n
9
ASP
83
A
ILE
84
n
10
ILE
84
A
ILE
85
n
11
ILE
85
A
VAL
86
n
12
VAL
86
A
VAL
87
n
13
VAL
87
A
ALA
88
n
14
ALA
88
A
LEU
89
n
15
LEU
89
A
TYR
90
n
16
TYR
90
A
ASP
91
n
17
ASP
91
A
TYR
92
n
18
TYR
92
A
GLU
93
n
19
GLU
93
A
ALA
94
n
20
ALA
94
A
ILE
95
n
21
ILE
95
A
HIS
96
n
22
HIS
96
A
HIS
97
n
23
HIS
97
A
GLU
98
n
24
GLU
98
A
ASP
99
n
25
ASP
99
A
LEU
100
n
26
LEU
100
A
SER
101
n
27
SER
101
A
PHE
102
n
28
PHE
102
A
GLN
103
n
29
GLN
103
A
LYS
104
n
30
LYS
104
A
GLY
105
n
31
GLY
105
A
ASP
106
n
32
ASP
106
A
GLN
107
n
33
GLN
107
A
MET
108
n
34
MET
108
A
VAL
109
n
35
VAL
109
A
VAL
110
n
36
VAL
110
A
LEU
111
n
37
LEU
111
A
GLU
112
n
38
GLU
112
A
GLU
113
n
39
GLU
113
A
SER
114
n
40
SER
114
A
GLY
116
n
41
GLY
116
A
GLU
117
n
42
GLU
117
A
TRP
118
n
43
TRP
118
A
TRP
119
n
44
TRP
119
A
LYS
120
n
45
LYS
120
A
ALA
121
n
46
ALA
121
A
ARG
122
n
47
ARG
122
A
SER
123
n
48
SER
123
A
LEU
124
n
49
LEU
124
A
ALA
125
n
50
ALA
125
A
THR
126
n
51
THR
126
A
ARG
127
n
52
ARG
127
A
LYS
128
n
53
LYS
128
A
GLU
129
n
54
GLU
129
A
GLY
130
n
55
GLY
130
A
TYR
131
n
56
TYR
131
A
ILE
132
n
57
ILE
132
A
PRO
133
n
58
PRO
133
A
SER
134
n
59
SER
134
A
ASN
135
n
60
ASN
135
A
TYR
136
n
61
TYR
136
A
VAL
137
n
62
VAL
137
A
ALA
138
n
63
ALA
138
A
ARG
139
n
64
ARG
139
A
VAL
140
n
65
VAL
140
A
ASP
141
n
66
ASP
141
A
SER
142
n
67
SER
142
A
LEU
143
n
68
LEU
143
A
GLU
144
n
69
GLU
144
A
THR
145
n
70
THR
145
A
GLU
146
n
71
GLU
146
A
GLU
147
n
72
GLU
147
A
TRP
148
n
73
TRP
148
A
PHE
149
n
74
PHE
149
A
PHE
150
n
75
PHE
150
A
LYS
151
n
76
LYS
151
A
GLY
152
n
77
GLY
152
A
ILE
153
n
78
ILE
153
A
SER
154
n
79
SER
154
A
ARG
155
n
80
ARG
155
A
LYS
156
n
81
LYS
156
A
ASP
157
n
82
ASP
157
A
ALA
158
n
83
ALA
158
A
GLU
159
n
84
GLU
159
A
ARG
160
n
85
ARG
160
A
GLN
161
n
86
GLN
161
A
LEU
162
n
87
LEU
162
A
LEU
163
n
88
LEU
163
A
ALA
164
n
89
ALA
164
A
PRO
165
n
90
PRO
165
A
GLY
166
n
91
GLY
166
A
ASN
167
n
92
ASN
167
A
MET
168
n
93
MET
168
A
LEU
169
n
94
LEU
169
A
GLY
170
n
95
GLY
170
A
SER
171
n
96
SER
171
A
PHE
172
n
97
PHE
172
A
MET
173
n
98
MET
173
A
ILE
174
n
99
ILE
174
A
ARG
175
n
100
ARG
175
A
ASP
176
n
101
ASP
176
A
SER
177
n
102
SER
177
A
GLU
178
n
103
GLU
178
A
THR
179
n
104
THR
179
A
THR
180
n
105
THR
180
A
LYS
181
n
106
LYS
181
A
GLY
182
n
107
GLY
182
A
SER
183
n
108
SER
183
A
TYR
184
n
109
TYR
184
A
SER
185
n
110
SER
185
A
LEU
186
n
111
LEU
186
A
SER
187
n
112
SER
187
A
VAL
188
n
113
VAL
188
A
ARG
189
n
114
ARG
189
A
ASP
190
n
115
ASP
190
A
TYR
191
n
116
TYR
191
A
ASP
192
n
117
ASP
192
A
PRO
193
n
118
PRO
193
A
ARG
194
n
119
ARG
194
A
GLN
195
n
120
GLN
195
A
GLY
196
n
121
GLY
196
A
ASP
197
n
122
ASP
197
A
THR
198
n
123
THR
198
A
VAL
199
n
124
VAL
199
A
LYS
200
n
125
LYS
200
A
HIS
201
n
126
HIS
201
A
TYR
202
n
127
TYR
202
A
LYS
203
n
128
LYS
203
A
ILE
204
n
129
ILE
204
A
ARG
205
n
130
ARG
205
A
THR
206
n
131
THR
206
A
LEU
207
n
132
LEU
207
A
ASP
208
n
133
ASP
208
A
ASN
209
n
134
ASN
209
A
GLY
210
n
135
GLY
210
A
GLY
211
n
136
GLY
211
A
PHE
212
n
137
PHE
212
A
TYR
213
n
138
TYR
213
A
ILE
214
n
139
ILE
214
A
SER
215
n
140
SER
215
A
PRO
216
n
141
PRO
216
A
ARG
217
n
142
ARG
217
A
SER
218
n
143
SER
218
A
THR
219
n
144
THR
219
A
PHE
220
n
145
PHE
220
A
SER
221
n
146
SER
221
A
THR
222
n
147
THR
222
A
LEU
223
n
148
LEU
223
A
GLN
224
n
149
GLN
224
A
GLU
225
n
150
GLU
225
A
LEU
226
n
151
LEU
226
A
VAL
227
n
152
VAL
227
A
ASP
228
n
153
ASP
228
A
HIS
229
n
154
HIS
229
A
TYR
230
n
155
TYR
230
A
LYS
231
n
156
LYS
231
A
LYS
232
n
157
LYS
232
A
GLY
233
n
158
GLY
233
A
ASN
234
n
159
ASN
234
A
ASP
235
n
160
ASP
235
A
GLY
236
n
161
GLY
236
A
LEU
237
n
162
LEU
237
A
CYS
238
n
163
CYS
238
A
GLN
239
n
164
GLN
239
A
LYS
240
n
165
LYS
240
A
LEU
241
n
166
LEU
241
A
SER
242
n
167
SER
242
A
VAL
243
n
168
VAL
243
A
PRO
244
n
169
PRO
244
A
CYS
245
n
170
CYS
245
A
MET
246
n
171
MET
246
A
n
172
247
A
n
173
248
A
n
174
249
A
n
175
250
A
n
176
251
A
n
177
252
A
n
178
253
A
n
179
254
A
n
180
255
A
n
181
256
A
n
182
257
A
n
183
258
A
n
184
259
A
n
185
260
A
n
186
261
A
n
187
262
A
n
188
263
A
n
189
264
A
n
190
265
A
n
191
266
A
n
192
267
A
n
193
268
A
1.2493
-0.5274
-0.4856
0.8541
1.1247
1.6548
-0.2059
0.2010
0.0217
0.1289
-0.1876
0.2212
0.2378
-0.1377
0.3538
0.1373
-0.0052
0.0105
0.1134
0.0162
0.2169
refined
-28.0065
40.1498
-10.0072
X-RAY DIFFRACTION
0.5487
0.3617
0.0068
0.7057
0.2042
0.0856
-0.0309
0.1060
-0.0095
0.2335
-0.0295
0.1054
0.2681
0.1458
0.0310
0.5780
0.1876
0.1246
0.4259
-0.0342
0.2598
refined
-13.3550
25.3807
-14.9878
X-RAY DIFFRACTION
0.7274
0.2007
-0.2482
0.8353
-0.3329
0.9734
-0.0996
-0.1578
-0.0862
0.0393
-0.0951
-0.0067
-0.2263
-0.0767
-0.0569
0.0758
0.0575
-0.0324
0.0258
-0.0041
0.0187
refined
-4.4593
16.7030
-7.9364
X-RAY DIFFRACTION
A
83
A
142
X-RAY DIFFRACTION
1
(chain A and resid 83:142)
A
143
A
147
X-RAY DIFFRACTION
2
(chain A and resid 143:147)
A
148
A
246
X-RAY DIFFRACTION
3
(chain A and resid 148:246)
1
0.478
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ILE
132
A
O
ILE
57
A
N
TRP
119
A
N
TRP
44
A
O
TRP
118
A
O
TRP
43
A
N
SER
114
A
N
SER
40
A
O
MET
108
A
O
MET
34
A
N
VAL
86
A
N
VAL
12
A
N
VAL
87
A
N
VAL
13
A
O
ALA
138
A
O
ALA
63
A
N
PHE
150
A
N
PHE
75
A
O
ILE
174
A
O
ILE
99
A
N
MET
173
A
N
MET
98
A
O
SER
187
A
O
SER
112
A
N
ASP
192
A
N
ASP
117
A
O
GLY
196
A
O
GLY
121
A
N
ARG
205
A
N
ARG
130
A
O
TYR
213
A
O
TYR
138
A
N
PHE
212
A
N
PHE
137
A
O
PHE
220
A
O
PHE
145
1
A
CG
ASN
209
A
CG
ASN
134
1
Y
1
A
OD1
ASN
209
A
OD1
ASN
134
1
Y
1
A
ND2
ASN
209
A
ND2
ASN
134
1
Y
1
A
GLY
75
A
GLY
1
1
Y
1
A
ILE
76
A
ILE
2
1
Y
1
A
ARG
77
A
ARG
3
1
Y
1
A
GLU
78
A
GLU
4
1
Y
1
A
ALA
79
A
ALA
5
1
Y
1
A
GLY
80
A
GLY
6
1
Y
1
A
SER
81
A
SER
7
1
Y
1
A
GLU
82
A
GLU
8
1
Y
1
A
SER
247
A
SER
172
1
Y
1
A
SER
248
A
SER
173
1
Y
1
A
LYS
249
A
LYS
174
1
Y
1
A
PRO
250
A
PRO
175
1
Y
1
A
GLN
251
A
GLN
176
1
Y
1
A
LYS
252
A
LYS
177
1
Y
1
A
PRO
253
A
PRO
178
1
Y
1
A
TRP
254
A
TRP
179
1
Y
1
A
GLU
255
A
GLU
180
1
Y
1
A
LYS
256
A
LYS
181
1
Y
1
A
ASP
257
A
ASP
182
1
Y
1
A
ALA
258
A
ALA
183
1
Y
1
A
TRP
259
A
TRP
184
1
Y
1
A
GLU
260
A
GLU
185
1
Y
1
A
LEU
261
A
LEU
186
1
Y
1
A
GLU
262
A
GLU
187
1
Y
1
A
HIS
263
A
HIS
188
1
Y
1
A
HIS
264
A
HIS
189
1
Y
1
A
HIS
265
A
HIS
190
1
Y
1
A
HIS
266
A
HIS
191
1
Y
1
A
HIS
267
A
HIS
192
1
Y
1
A
HIS
268
A
HIS
193
1
Y
1
A
A
OD1
NE2
ASP
GLN
190
239
2.16
1
A
HIS
97
-27.97
-67.23
1
A
LEU
111
-95.00
-83.58
1
A
GLU
112
-101.21
-164.80
1
A
SER
114
-106.83
64.12
1
A
ALA
125
-124.48
-66.96
1
A
ARG
127
93.93
-3.86
1
A
ARG
139
-47.95
160.52
1
A
ASP
141
83.71
-33.30
1
A
SER
142
-26.04
128.02
1
A
LEU
143
61.30
-44.54
1
A
PRO
165
-45.89
162.88
1
A
THR
180
-164.46
96.40
1
A
ASP
190
-111.11
-150.67
1
A
TYR
191
-178.18
130.52
1
A
GLN
195
-146.32
-16.71
1
A
PRO
216
-68.69
36.96
1
A
TYR
230
-69.74
2.49
1
A
SER
242
-118.93
-80.38
99.870
43.0302
3.450
-1.4321
0.0000
-0.0000
-1.4321
0.0000
0.3747
RESIDUE NUMBERING FOR THE STRUCTURE IS USING THE HUMAN cSRC NUMBERING
0.1764
0.1194
0.1198
2.61
25.8900
302
5920
5.1000
94.5400
1.000
0.640
1
THROUGHOUT
1.970
MOLECULAR REPLACEMENT
0.9000
1.1100
PDB ENTRY 1QCF
TWIN_LSQ_F
FLAT BULK SOLVENT MODEL
48.8420
0.3490
2.61
25.8900
35
1349
0
0
1314
0.007
1343
1.062
1811
0.080
191
0.004
233
19.888
492
0.2706
0.1738
3.2819
142
2784
2926
2
89.0000
0.1402
0.0955
23.2277
138
2828
2966
2
91.0000
2.610
50.000
3NHN
6220
2.0
0.056
1.039
1
33.600
3.400
98.200
0.278
2.610
2.660
270
1.181
2.300
78.900
0.373
2.660
2.700
289
1.313
2.500
91.500
0.229
2.700
2.760
301
1.150
3.000
98.400
0.206
2.760
2.810
314
1.046
3.000
99.100
0.202
2.810
2.870
286
1.113
3.100
100.000
0.194
2.870
2.940
354
1.041
3.000
98.900
0.169
2.940
3.010
312
1.124
3.100
100.000
0.121
3.010
3.090
307
1.000
3.200
100.000
0.097
3.090
3.190
299
1.341
3.400
99.700
0.075
3.190
3.290
330
1.095
3.500
100.000
0.072
3.290
3.410
325
0.937
3.700
100.000
0.072
3.410
3.540
314
1.075
3.700
99.700
0.058
3.540
3.700
279
0.665
3.700
100.000
0.063
3.700
3.900
351
0.758
3.800
100.000
0.042
3.900
4.140
321
1.112
3.700
100.000
0.043
4.140
4.460
289
1.230
3.800
100.000
0.034
4.460
4.910
332
1.027
3.800
100.000
0.036
4.910
5.620
326
1.052
3.800
100.000
0.038
5.620
7.080
308
0.987
3.800
100.000
0.039
7.080
50.000
313
0.878
3.800
98.700
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
program
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
refinement
Paul D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
1.6_289
data extraction
PDB
deposit@deposit.rcsb.org
June 10, 2010
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.10
data collection
StructureStudio
data reduction
DENZO
N
Crystal structure of the SRC-family kinase HCK SH3-SH2-linker regulatory region
1
N
N
2
N
N
A
SER
154
A
SER
79
HELX_P
A
ALA
164
A
ALA
89
1
1
11
A
THR
222
A
THR
147
HELX_P
A
TYR
230
A
TYR
155
1
2
9
TRANSFERASE
Hck, SH3-SH2-linker, Src family kinase, SFK, TRANSFERASE
A
SER
142
A
SER
67
1
A
LEU
143
A
LEU
68
-14.96
HCK_HUMAN
UNP
1
72
P08631
GIREAGSEDIIVVALYDYEAIHHEDLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVDSLETEEWFFKGISR
KDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGND
GLCQKLSVPCMSSKPQKPWEKDAWE
72
256
3NHN
75
260
P08631
A
1
1
185
1
expression tag
LEU
261
3NHN
A
P08631
UNP
186
1
expression tag
GLU
262
3NHN
A
P08631
UNP
187
1
expression tag
HIS
263
3NHN
A
P08631
UNP
188
1
expression tag
HIS
264
3NHN
A
P08631
UNP
189
1
expression tag
HIS
265
3NHN
A
P08631
UNP
190
1
expression tag
HIS
266
3NHN
A
P08631
UNP
191
1
expression tag
HIS
267
3NHN
A
P08631
UNP
192
1
expression tag
HIS
268
3NHN
A
P08631
UNP
193
5
6
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
129
A
GLU
54
A
PRO
133
A
PRO
58
A
TRP
118
A
TRP
43
A
SER
123
A
SER
48
A
GLN
107
A
GLN
33
A
SER
114
A
SER
40
A
ILE
85
A
ILE
11
A
ALA
88
A
ALA
14
A
VAL
137
A
VAL
62
A
ARG
139
A
ARG
64
A
PHE
149
A
PHE
74
A
PHE
150
A
PHE
75
A
PHE
172
A
PHE
97
A
ASP
176
A
ASP
101
A
TYR
184
A
TYR
109
A
ASP
192
A
ASP
117
A
GLY
196
A
GLY
121
A
THR
206
A
THR
131
A
PHE
212
A
PHE
137
A
TYR
213
A
TYR
138
A
THR
219
A
THR
144
A
PHE
220
A
PHE
145
144
P 31