0.012293 0.007097 0.000000 0.000000 0.014194 0.000000 0.000000 0.000000 0.014794 0.00000 0.00000 0.00000 Ronning, D.R. Iacopelli, N.M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 81.350 81.350 67.595 C5 H5 N5 135.127 ADENINE non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C2 H6 O2 62.068 1,2-ETHANEDIOL ETHYLENE GLYCOL non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C4 H12 N O3 1 122.143 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL TRIS BUFFER non-polymer C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Y 1 N N Y 2 N C Y 3 N N Y 4 N C Y 5 N C N 6 N N Y 7 N N Y 8 N C Y 9 N N Y 10 N C N 11 N H N 12 N H N 13 N H N 14 N H N 15 N H N 16 N N N 17 S C N 18 N C N 19 N O N 20 N C N 21 N O N 22 N H N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N N N 30 S C N 31 N C N 32 N O N 33 N C N 34 N C N 35 N C N 36 N N N 37 N C N 38 N N N 39 N N N 40 N O N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N N N 57 S C N 58 N C N 59 N O N 60 N C N 61 N C N 62 N O N 63 N N N 64 N O N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N N N 74 S C N 75 N C N 76 N O N 77 N C N 78 N C N 79 N O N 80 N O N 81 N O N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N N N 90 R C N 91 N C N 92 N O N 93 N C N 94 N S N 95 N O N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N C N 104 N O N 105 N C N 106 N O N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 S C N 115 N C N 116 N O N 117 N C N 118 N C N 119 N C N 120 N O N 121 N N N 122 N O N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N N N 134 S C N 135 N C N 136 N O N 137 N C N 138 N C N 139 N C N 140 N O N 141 N O N 142 N O N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N N N 153 N C N 154 N C N 155 N O N 156 N O N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N N N 163 S C N 164 N C N 165 N O N 166 N C Y 167 N C Y 168 N N Y 169 N C Y 170 N C Y 171 N N N 172 N O N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N O N 184 N H N 185 N H N 186 N N N 187 S C N 188 N C N 189 N O N 190 S C N 191 N C N 192 N C N 193 N C N 194 N O N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N N N 209 S C N 210 N C N 211 N O N 212 N C N 213 N C N 214 N C N 215 N C N 216 N O N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N C N 237 N C N 238 N N N 239 N O N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N N N 256 S C N 257 N C N 258 N O N 259 N C N 260 N C N 261 N S N 262 N C N 263 N O N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N N N 276 S C N 277 N C N 278 N O N 279 N C Y 280 N C Y 281 N C Y 282 N C Y 283 N C Y 284 N C Y 285 N C N 286 N O N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N N N 299 S C N 300 N C N 301 N O N 302 N C N 303 N C N 304 N C N 305 N O N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N N N 316 S C N 317 N C N 318 N O N 319 N C N 320 N O N 321 N O N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N N N 330 S C N 331 N C N 332 N O N 333 R C N 334 N O N 335 N C N 336 N O N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N C N 347 N C N 348 N C N 349 N C N 350 N N N 351 N O N 352 N O N 353 N O N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N N N 367 S C N 368 N C N 369 N O N 370 N C Y 371 N C Y 372 N C Y 373 N C Y 374 N C Y 375 N C Y 376 N C N 377 N O N 378 N O N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N N N 391 S C N 392 N C N 393 N O N 394 N C N 395 N C N 396 N C N 397 N O N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H Y 1 N sing Y 2 N sing N 3 N sing Y 4 N doub N 5 N sing Y 6 N sing Y 7 N sing Y 8 N doub N 9 N sing Y 10 N doub N 11 N sing N 12 N sing Y 13 N sing Y 14 N doub N 15 N sing Y 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N doub N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N doub N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N doub N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N doub N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N doub N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N doub N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N doub N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N doub N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N doub N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N doub N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N doub N 161 N sing N 162 N sing N 163 N sing N 164 N sing Y 165 N sing Y 166 N doub Y 167 N doub N 168 N sing Y 169 N sing N 170 N sing Y 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N doub N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N doub N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N doub N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N doub N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N doub N 269 N sing N 270 N sing N 271 N sing N 272 N sing Y 273 N doub Y 274 N sing Y 275 N sing N 276 N sing Y 277 N doub N 278 N sing Y 279 N doub N 280 N sing Y 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N doub N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N doub N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N doub N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N doub N 357 N sing N 358 N sing N 359 N sing N 360 N sing Y 361 N doub Y 362 N sing Y 363 N sing N 364 N sing Y 365 N doub N 366 N sing Y 367 N doub N 368 N sing Y 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N doub N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing US Protein Sci. PRCIEI 0795 0961-8368 19 2498 2510 10.1002/pro.524 20954236 Enzyme-ligand interactions that drive active site rearrangements in the Helicobacter pylori 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase. 2010 10.2210/pdb3nm6/pdb pdb_00003nm6 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 95 1 CCD 2009-07-11 MARMOSAIC 300 mm CCD diamond SINGLE WAVELENGTH M x-ray 1 1.078 1.0 21-ID-D APS 1.078 SYNCHROTRON APS BEAMLINE 21-ID-D 25049.900 MTA/SAH nucleosidase 3.2.2.9 1 man polymer 135.127 ADENINE 1 syn non-polymer 122.143 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 1 syn non-polymer 62.068 1,2-ETHANEDIOL 4 syn non-polymer 18.015 water 158 nat water 5'-methylthioadenosine nucleosidase, S-adenosylhomocysteine nucleosidase no no MQKIGILGAMREEITPILELFGVDFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVAG SLVKDLKINDLLVATQLVQHDVDLSAFDHPLGFIPESAIFIETSGSLNALAKKIANEQHIALKEGVIASGDQFVHSKERK EFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLRSISDNADEKAGMSFDEFLEKSAHTSAKFLKSMVDEL MQKIGILGAMREEITPILELFGVDFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVAG SLVKDLKINDLLVATQLVQHDVDLSAFDHPLGFIPESAIFIETSGSLNALAKKIANEQHIALKEGVIASGDQFVHSKERK EFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLRSISDNADEKAGMSFDEFLEKSAHTSAKFLKSMVDEL B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Campylobacter pylori J99 sample jhp_0082, mtn, mtnN, Pfs 85963 Helicobacter pylori 562 Escherichia coli BL21(DE3) plasmid 1 2.58 52.28 VAPOR DIFFUSION, HANGING DROP 8.5 16 % w/v PEG 8000, 0.1 M Tris, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K 291 chem_comp_atom chem_comp_bond database_2 struct_site repository Initial release Version format compliance Data collection Database references Derived calculations 1 0 2010-11-24 1 1 2011-07-13 1 2 2023-12-27 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2010-06-21 REL REL ADE ADENINE TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL EDO 1,2-ETHANEDIOL HOH water ADE 231 2 ADE ADE 231 B TRS 232 3 TRS TRS 232 B EDO 1001 4 EDO EDO 1001 B EDO 1002 4 EDO EDO 1002 B EDO 1003 4 EDO EDO 1003 B EDO 1004 4 EDO EDO 1004 B HOH 233 5 HOH HOH 233 B HOH 234 5 HOH HOH 234 B HOH 235 5 HOH HOH 235 B HOH 236 5 HOH HOH 236 B HOH 237 5 HOH HOH 237 B HOH 238 5 HOH HOH 238 B HOH 239 5 HOH HOH 239 B HOH 240 5 HOH HOH 240 B HOH 241 5 HOH HOH 241 B HOH 242 5 HOH HOH 242 B HOH 243 5 HOH HOH 243 B HOH 244 5 HOH HOH 244 B HOH 245 5 HOH HOH 245 B HOH 246 5 HOH HOH 246 B HOH 247 5 HOH HOH 247 B HOH 248 5 HOH HOH 248 B HOH 249 5 HOH HOH 249 B HOH 250 5 HOH HOH 250 B HOH 251 5 HOH HOH 251 B HOH 252 5 HOH HOH 252 B HOH 253 5 HOH HOH 253 B HOH 254 5 HOH HOH 254 B HOH 255 5 HOH HOH 255 B HOH 256 5 HOH HOH 256 B HOH 257 5 HOH HOH 257 B HOH 258 5 HOH HOH 258 B HOH 259 5 HOH HOH 259 B HOH 260 5 HOH HOH 260 B HOH 261 5 HOH HOH 261 B HOH 262 5 HOH HOH 262 B HOH 263 5 HOH HOH 263 B HOH 264 5 HOH HOH 264 B HOH 265 5 HOH HOH 265 B HOH 266 5 HOH HOH 266 B HOH 267 5 HOH HOH 267 B HOH 268 5 HOH HOH 268 B HOH 269 5 HOH HOH 269 B HOH 270 5 HOH HOH 270 B HOH 271 5 HOH HOH 271 B HOH 272 5 HOH HOH 272 B HOH 273 5 HOH HOH 273 B HOH 274 5 HOH HOH 274 B HOH 275 5 HOH HOH 275 B HOH 276 5 HOH HOH 276 B HOH 277 5 HOH HOH 277 B HOH 278 5 HOH HOH 278 B HOH 279 5 HOH HOH 279 B HOH 280 5 HOH HOH 280 B HOH 281 5 HOH HOH 281 B HOH 282 5 HOH HOH 282 B HOH 283 5 HOH HOH 283 B HOH 284 5 HOH HOH 284 B HOH 285 5 HOH HOH 285 B HOH 286 5 HOH HOH 286 B HOH 287 5 HOH HOH 287 B HOH 288 5 HOH HOH 288 B HOH 289 5 HOH HOH 289 B HOH 290 5 HOH HOH 290 B HOH 291 5 HOH HOH 291 B HOH 292 5 HOH HOH 292 B HOH 293 5 HOH HOH 293 B HOH 294 5 HOH HOH 294 B HOH 295 5 HOH HOH 295 B HOH 296 5 HOH HOH 296 B HOH 297 5 HOH HOH 297 B HOH 298 5 HOH HOH 298 B HOH 299 5 HOH HOH 299 B HOH 300 5 HOH HOH 300 B HOH 301 5 HOH HOH 301 B HOH 302 5 HOH HOH 302 B HOH 303 5 HOH HOH 303 B HOH 304 5 HOH HOH 304 B HOH 305 5 HOH HOH 305 B HOH 306 5 HOH HOH 306 B HOH 307 5 HOH HOH 307 B HOH 308 5 HOH HOH 308 B HOH 309 5 HOH HOH 309 B HOH 310 5 HOH HOH 310 B HOH 311 5 HOH HOH 311 B HOH 312 5 HOH HOH 312 B HOH 313 5 HOH HOH 313 B HOH 314 5 HOH HOH 314 B HOH 315 5 HOH HOH 315 B HOH 316 5 HOH HOH 316 B HOH 317 5 HOH HOH 317 B HOH 318 5 HOH HOH 318 B HOH 319 5 HOH HOH 319 B HOH 320 5 HOH HOH 320 B HOH 321 5 HOH HOH 321 B HOH 322 5 HOH HOH 322 B HOH 323 5 HOH HOH 323 B HOH 324 5 HOH HOH 324 B HOH 325 5 HOH HOH 325 B HOH 326 5 HOH HOH 326 B HOH 327 5 HOH HOH 327 B HOH 328 5 HOH HOH 328 B HOH 329 5 HOH HOH 329 B HOH 330 5 HOH HOH 330 B HOH 331 5 HOH HOH 331 B HOH 332 5 HOH HOH 332 B HOH 333 5 HOH HOH 333 B HOH 334 5 HOH HOH 334 B HOH 335 5 HOH HOH 335 B HOH 336 5 HOH HOH 336 B HOH 337 5 HOH HOH 337 B HOH 338 5 HOH HOH 338 B HOH 339 5 HOH HOH 339 B HOH 340 5 HOH HOH 340 B HOH 341 5 HOH HOH 341 B HOH 342 5 HOH HOH 342 B HOH 343 5 HOH HOH 343 B HOH 344 5 HOH HOH 344 B HOH 345 5 HOH HOH 345 B HOH 346 5 HOH HOH 346 B HOH 347 5 HOH HOH 347 B HOH 348 5 HOH HOH 348 B HOH 349 5 HOH HOH 349 B HOH 350 5 HOH HOH 350 B HOH 351 5 HOH HOH 351 B HOH 352 5 HOH HOH 352 B HOH 353 5 HOH HOH 353 B HOH 354 5 HOH HOH 354 B HOH 355 5 HOH HOH 355 B HOH 356 5 HOH HOH 356 B HOH 357 5 HOH HOH 357 B HOH 358 5 HOH HOH 358 B HOH 359 5 HOH HOH 359 B HOH 360 5 HOH HOH 360 B HOH 361 5 HOH HOH 361 B HOH 362 5 HOH HOH 362 B HOH 363 5 HOH HOH 363 B HOH 364 5 HOH HOH 364 B HOH 365 5 HOH HOH 365 B HOH 366 5 HOH HOH 366 B HOH 367 5 HOH HOH 367 B HOH 368 5 HOH HOH 368 B HOH 369 5 HOH HOH 369 B HOH 370 5 HOH HOH 370 B HOH 371 5 HOH HOH 371 B HOH 372 5 HOH HOH 372 B HOH 373 5 HOH HOH 373 B HOH 374 5 HOH HOH 374 B HOH 375 5 HOH HOH 375 B HOH 376 5 HOH HOH 376 B HOH 377 5 HOH HOH 377 B HOH 378 5 HOH HOH 378 B HOH 379 5 HOH HOH 379 B HOH 380 5 HOH HOH 380 B HOH 381 5 HOH HOH 381 B HOH 382 5 HOH HOH 382 B HOH 383 5 HOH HOH 383 B HOH 384 5 HOH HOH 384 B HOH 385 5 HOH HOH 385 B HOH 386 5 HOH HOH 386 B HOH 387 5 HOH HOH 387 B HOH 388 5 HOH HOH 388 B HOH 389 5 HOH HOH 389 B HOH 390 5 HOH HOH 390 B n 1 1 B GLN 2 n 2 GLN 2 B LYS 3 n 3 LYS 3 B ILE 4 n 4 ILE 4 B GLY 5 n 5 GLY 5 B ILE 6 n 6 ILE 6 B LEU 7 n 7 LEU 7 B GLY 8 n 8 GLY 8 B ALA 9 n 9 ALA 9 B MET 10 n 10 MET 10 B ARG 11 n 11 ARG 11 B GLU 12 n 12 GLU 12 B GLU 13 n 13 GLU 13 B ILE 14 n 14 ILE 14 B THR 15 n 15 THR 15 B PRO 16 n 16 PRO 16 B ILE 17 n 17 ILE 17 B LEU 18 n 18 LEU 18 B GLU 19 n 19 GLU 19 B LEU 20 n 20 LEU 20 B PHE 21 n 21 PHE 21 B GLY 22 n 22 GLY 22 B VAL 23 n 23 VAL 23 B ASP 24 n 24 ASP 24 B PHE 25 n 25 PHE 25 B GLU 26 n 26 GLU 26 B GLU 27 n 27 GLU 27 B ILE 28 n 28 ILE 28 B PRO 29 n 29 PRO 29 B LEU 30 n 30 LEU 30 B GLY 31 n 31 GLY 31 B GLY 32 n 32 GLY 32 B ASN 33 n 33 ASN 33 B VAL 34 n 34 VAL 34 B PHE 35 n 35 PHE 35 B HIS 36 n 36 HIS 36 B LYS 37 n 37 LYS 37 B GLY 38 n 38 GLY 38 B VAL 39 n 39 VAL 39 B TYR 40 n 40 TYR 40 B HIS 41 n 41 HIS 41 B ASN 42 n 42 ASN 42 B LYS 43 n 43 LYS 43 B GLU 44 n 44 GLU 44 B ILE 45 n 45 ILE 45 B ILE 46 n 46 ILE 46 B VAL 47 n 47 VAL 47 B ALA 48 n 48 ALA 48 B TYR 49 n 49 TYR 49 B SER 50 n 50 SER 50 B LYS 51 n 51 LYS 51 B ILE 52 n 52 ILE 52 B GLY 53 n 53 GLY 53 B LYS 54 n 54 LYS 54 B VAL 55 n 55 VAL 55 B HIS 56 n 56 HIS 56 B SER 57 n 57 SER 57 B THR 58 n 58 THR 58 B LEU 59 n 59 LEU 59 B THR 60 n 60 THR 60 B THR 61 n 61 THR 61 B THR 62 n 62 THR 62 B SER 63 n 63 SER 63 B MET 64 n 64 MET 64 B ILE 65 n 65 ILE 65 B LEU 66 n 66 LEU 66 B ALA 67 n 67 ALA 67 B PHE 68 n 68 PHE 68 B GLY 69 n 69 GLY 69 B VAL 70 n 70 VAL 70 B GLN 71 n 71 GLN 71 B LYS 72 n 72 LYS 72 B VAL 73 n 73 VAL 73 B LEU 74 n 74 LEU 74 B PHE 75 n 75 PHE 75 B SER 76 n 76 SER 76 B GLY 77 n 77 GLY 77 B VAL 78 n 78 VAL 78 B ALA 79 n 79 ALA 79 B GLY 80 n 80 GLY 80 B SER 81 n 81 SER 81 B LEU 82 n 82 LEU 82 B VAL 83 n 83 VAL 83 B LYS 84 n 84 LYS 84 B ASP 85 n 85 ASP 85 B LEU 86 n 86 LEU 86 B LYS 87 n 87 LYS 87 B ILE 88 n 88 ILE 88 B ASN 89 n 89 ASN 89 B ASP 90 n 90 ASP 90 B LEU 91 n 91 LEU 91 B LEU 92 n 92 LEU 92 B VAL 93 n 93 VAL 93 B ALA 94 n 94 ALA 94 B THR 95 n 95 THR 95 B GLN 96 n 96 GLN 96 B LEU 97 n 97 LEU 97 B VAL 98 n 98 VAL 98 B GLN 99 n 99 GLN 99 B HIS 100 n 100 HIS 100 B ASP 101 n 101 ASP 101 B VAL 102 n 102 VAL 102 B ASP 103 n 103 ASP 103 B LEU 104 n 104 LEU 104 B SER 105 n 105 SER 105 B ALA 106 n 106 ALA 106 B PHE 107 n 107 PHE 107 B ASP 108 n 108 ASP 108 B HIS 109 n 109 HIS 109 B PRO 110 n 110 PRO 110 B LEU 111 n 111 LEU 111 B GLY 112 n 112 GLY 112 B PHE 113 n 113 PHE 113 B ILE 114 n 114 ILE 114 B PRO 115 n 115 PRO 115 B GLU 116 n 116 GLU 116 B SER 117 n 117 SER 117 B ALA 118 n 118 ALA 118 B ILE 119 n 119 ILE 119 B PHE 120 n 120 PHE 120 B ILE 121 n 121 ILE 121 B GLU 122 n 122 GLU 122 B THR 123 n 123 THR 123 B SER 124 n 124 SER 124 B GLY 125 n 125 GLY 125 B SER 126 n 126 SER 126 B LEU 127 n 127 LEU 127 B ASN 128 n 128 ASN 128 B ALA 129 n 129 ALA 129 B LEU 130 n 130 LEU 130 B ALA 131 n 131 ALA 131 B LYS 132 n 132 LYS 132 B LYS 133 n 133 LYS 133 B ILE 134 n 134 ILE 134 B ALA 135 n 135 ALA 135 B ASN 136 n 136 ASN 136 B GLU 137 n 137 GLU 137 B GLN 138 n 138 GLN 138 B HIS 139 n 139 HIS 139 B ILE 140 n 140 ILE 140 B ALA 141 n 141 ALA 141 B LEU 142 n 142 LEU 142 B LYS 143 n 143 LYS 143 B GLU 144 n 144 GLU 144 B GLY 145 n 145 GLY 145 B VAL 146 n 146 VAL 146 B ILE 147 n 147 ILE 147 B ALA 148 n 148 ALA 148 B SER 149 n 149 SER 149 B GLY 150 n 150 GLY 150 B ASP 151 n 151 ASP 151 B GLN 152 n 152 GLN 152 B PHE 153 n 153 PHE 153 B VAL 154 n 154 VAL 154 B HIS 155 n 155 HIS 155 B SER 156 n 156 SER 156 B LYS 157 n 157 LYS 157 B GLU 158 n 158 GLU 158 B ARG 159 n 159 ARG 159 B LYS 160 n 160 LYS 160 B GLU 161 n 161 GLU 161 B PHE 162 n 162 PHE 162 B LEU 163 n 163 LEU 163 B VAL 164 n 164 VAL 164 B SER 165 n 165 SER 165 B GLU 166 n 166 GLU 166 B PHE 167 n 167 PHE 167 B LYS 168 n 168 LYS 168 B ALA 169 n 169 ALA 169 B SER 170 n 170 SER 170 B ALA 171 n 171 ALA 171 B VAL 172 n 172 VAL 172 B GLU 173 n 173 GLU 173 B MET 174 n 174 MET 174 B GLU 175 n 175 GLU 175 B GLY 176 n 176 GLY 176 B ALA 177 n 177 ALA 177 B SER 178 n 178 SER 178 B VAL 179 n 179 VAL 179 B ALA 180 n 180 ALA 180 B PHE 181 n 181 PHE 181 B VAL 182 n 182 VAL 182 B CYS 183 n 183 CYS 183 B GLN 184 n 184 GLN 184 B LYS 185 n 185 LYS 185 B PHE 186 n 186 PHE 186 B GLY 187 n 187 GLY 187 B VAL 188 n 188 VAL 188 B PRO 189 n 189 PRO 189 B CYS 190 n 190 CYS 190 B CYS 191 n 191 CYS 191 B VAL 192 n 192 VAL 192 B LEU 193 n 193 LEU 193 B ARG 194 n 194 ARG 194 B SER 195 n 195 SER 195 B ILE 196 n 196 ILE 196 B SER 197 n 197 SER 197 B ASP 198 n 198 ASP 198 B ASN 199 n 199 ASN 199 B ALA 200 n 200 ALA 200 B ASP 201 n 201 ASP 201 B GLU 202 n 202 GLU 202 B LYS 203 n 203 LYS 203 B ALA 204 n 204 ALA 204 B GLY 205 n 205 GLY 205 B MET 206 n 206 MET 206 B SER 207 n 207 SER 207 B PHE 208 n 208 PHE 208 B ASP 209 n 209 ASP 209 B GLU 210 n 210 GLU 210 B PHE 211 n 211 PHE 211 B LEU 212 n 212 LEU 212 B GLU 213 n 213 GLU 213 B LYS 214 n 214 LYS 214 B SER 215 n 215 SER 215 B ALA 216 n 216 ALA 216 B HIS 217 n 217 HIS 217 B THR 218 n 218 THR 218 B SER 219 n 219 SER 219 B ALA 220 n 220 ALA 220 B LYS 221 n 221 LYS 221 B PHE 222 n 222 PHE 222 B LEU 223 n 223 LEU 223 B LYS 224 n 224 LYS 224 B SER 225 n 225 SER 225 B MET 226 n 226 MET 226 B VAL 227 n 227 VAL 227 B ASP 228 n 228 ASP 228 B GLU 229 n 229 GLU 229 B LEU 230 n 230 LEU 230 B author_and_software_defined_assembly PISA 2 dimeric 5720 5 17500 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 5_557 x-y,-y,-z+7/3 crystal symmetry operation 0.0000000000 0.0000000000 157.7216666667 B N ILE 28 A N ILE 28 B O PHE 35 A O PHE 35 B N HIS 36 A N HIS 36 B O VAL 47 A O VAL 47 B O ILE 46 A O ILE 46 B N ILE 6 A N ILE 6 B N GLY 5 A N GLY 5 B O LYS 72 A O LYS 72 B N GLY 80 A N GLY 80 B O VAL 172 A O VAL 172 B O ALA 171 A O ALA 171 B N ALA 148 A N ALA 148 B O SER 149 A O SER 149 B N VAL 98 A N VAL 98 B N LEU 97 A N LEU 97 B O ILE 121 A O ILE 121 B N ILE 28 A N ILE 28 B O PHE 35 A O PHE 35 B N HIS 36 A N HIS 36 B O VAL 47 A O VAL 47 B O ILE 46 A O ILE 46 B N ILE 6 A N ILE 6 B N GLY 5 A N GLY 5 B O LYS 72 A O LYS 72 B N PHE 75 A N PHE 75 B O CYS 191 A O CYS 191 B O ARG 194 A O ARG 194 B N LEU 92 A N LEU 92 B N LEU 97 A N LEU 97 B O ILE 121 A O ILE 121 1 B HOH 322 H HOH 1 B MET 1 A MET 1 1 Y 1 B LYS 51 82.59 161.44 1 B ASN 89 84.58 -16.21 1 B SER 117 -137.71 -151.75 1 B HIS 155 -150.31 44.51 1 B GLU 175 -140.62 -20.60 1 B ASP 201 -113.35 -164.54 3.7712 0.0000 -0.0000 3.7712 0.0000 -7.5423 0.1707 0.1414 0.1429 1.602 34.852 1650 33313 4.95 96.95 0.17 random 1 THROUGHOUT 1.00 FOURIER SYNTHESIS 0.90 1.11 ML FLAT BULK SOLVENT MODEL 60.111 0.400 1.602 34.852 158 1943 34 0 1751 0.005 1858 0.945 2496 13.300 678 0.066 290 0.004 317 0.1644 0.0937 1.6588 148 2959 92.00 0.1344 0.0855 1.7252 164 2970 93.00 0.1417 0.0841 1.8037 137 3127 96.00 0.1518 0.0891 1.8988 172 3125 97.00 0.1521 0.0959 2.0178 185 3104 97.00 0.1490 0.1092 2.1735 155 3220 98.00 0.1556 0.1236 2.3922 164 3228 99.00 0.1702 0.1485 2.7383 190 3214 99.00 0.1876 0.1615 3.4494 165 3296 100.00 0.1794 0.1656 34.8599 170 3420 99.00 17.51 1.6 50.0 3NM6 33924 0.0 0.050 1 11.5 11.1 97.7 model building PHENIX refinement PHENIX (phenix.refine: 1.6_289) data reduction HKL-2000 data scaling HKL-2000 phasing PHENIX Helicobacter pylori MTAN complexed with adenine and tris 1 N N 2 N N 3 N N 4 N N 4 N N 4 N N 4 N N 5 N N B MET 10 A MET 10 HELX_P B GLY 22 A GLY 22 1 1 13 B GLY 53 A GLY 53 HELX_P B GLY 69 A GLY 69 1 2 17 B LEU 104 A LEU 104 HELX_P B ASP 108 A ASP 108 5 3 5 B SER 124 A SER 124 HELX_P B GLN 138 A GLN 138 1 4 15 B SER 156 A SER 156 HELX_P B LYS 168 A LYS 168 1 5 13 B GLU 175 A GLU 175 HELX_P B GLY 187 A GLY 187 1 6 13 B LYS 203 A LYS 203 HELX_P B ASP 228 A ASP 228 1 7 26 HYDROLASE nucleosidase, HYDROLASE MTNN_HELPJ UNP 1 1 Q9ZMY2 MQKIGILGAMREEITPILELFGVDFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVAG SLVKDLKINDLLVATQLVQHDVDLSAFDHPLGFIPESAIFIETSGSLNALAKKIANEQHIALKEGVIASGDQFVHSKERK EFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLRSISDNADEKAGMSFDEFLEKSAHTSAKFLKSMVDEL 1 230 3NM6 1 230 Q9ZMY2 B 1 1 230 9 8 anti-parallel anti-parallel parallel parallel anti-parallel parallel parallel anti-parallel anti-parallel anti-parallel parallel parallel parallel anti-parallel anti-parallel B GLU 26 A GLU 26 B LEU 30 A LEU 30 B ASN 33 A ASN 33 B TYR 40 A TYR 40 B LYS 43 A LYS 43 B TYR 49 A TYR 49 B LYS 3 A LYS 3 B GLY 8 A GLY 8 B LYS 72 A LYS 72 B SER 81 A SER 81 B ALA 171 A ALA 171 B GLU 173 A GLU 173 B LEU 142 A LEU 142 B SER 149 A SER 149 B LEU 91 A LEU 91 B GLN 99 A GLN 99 B PHE 120 A PHE 120 B GLU 122 A GLU 122 B GLU 26 A GLU 26 B LEU 30 A LEU 30 B ASN 33 A ASN 33 B TYR 40 A TYR 40 B LYS 43 A LYS 43 B TYR 49 A TYR 49 B LYS 3 A LYS 3 B GLY 8 A GLY 8 B LYS 72 A LYS 72 B SER 81 A SER 81 B CYS 190 A CYS 190 B ASP 198 A ASP 198 B LEU 91 A LEU 91 B GLN 99 A GLN 99 B PHE 120 A PHE 120 B GLU 122 A GLU 122 BINDING SITE FOR RESIDUE ADE B 231 B ADE 231 Software 12 BINDING SITE FOR RESIDUE TRS B 232 B TRS 232 Software 10 BINDING SITE FOR RESIDUE EDO B 1001 B EDO 1001 Software 6 BINDING SITE FOR RESIDUE EDO B 1002 B EDO 1002 Software 5 BINDING SITE FOR RESIDUE EDO B 1003 B EDO 1003 Software 2 BINDING SITE FOR RESIDUE EDO B 1004 B EDO 1004 Software 2 B VAL 78 A VAL 78 12 1_555 B ALA 79 A ALA 79 12 1_555 B GLY 80 A GLY 80 12 1_555 B PHE 153 A PHE 153 12 1_555 B VAL 154 A VAL 154 12 1_555 B VAL 172 A VAL 172 12 1_555 B GLU 173 A GLU 173 12 1_555 B MET 174 A MET 174 12 1_555 B SER 197 A SER 197 12 1_555 B ASP 198 A ASP 198 12 1_555 B ALA 200 A ALA 200 12 1_555 B TRS 232 C TRS 12 1_555 B ALA 9 A ALA 9 10 1_555 B MET 10 A MET 10 10 1_555 B GLU 13 A GLU 13 10 1_555 B VAL 78 A VAL 78 10 1_555 B GLU 173 A GLU 173 10 1_555 B MET 174 A MET 174 10 1_555 B GLU 175 A GLU 175 10 1_555 B ARG 194 A ARG 194 10 1_555 B PHE 208 A PHE 208 10 1_555 B ADE 231 B ADE 10 1_555 B SER 126 A SER 126 6 1_555 B LEU 127 A LEU 127 6 1_555 B LEU 130 A LEU 130 6 1_555 B LEU 230 A LEU 230 6 1_555 B HOH 346 H HOH 6 2_654 B HOH 383 H HOH 6 2_654 B ASN 33 A ASN 33 5 1_555 B VAL 34 A VAL 34 5 1_555 B TYR 49 A TYR 49 5 1_555 B HOH 260 H HOH 5 1_555 B HOH 341 H HOH 5 1_555 B PHE 68 A PHE 68 2 1_555 B HOH 387 H HOH 2 1_555 B GLU 137 A GLU 137 2 1_555 B GLU 229 A GLU 229 2 1_555 154 P 32 2 1