0.008864 0.005118 0.000000 0.000000 0.010235 0.000000 0.000000 0.000000 0.008656 0.000000 0.000000 0.000000 Guan, R. Xiao, R. Acton, T. Jiang, M. Roth, M. Montelione, G.T. Northeast Structural Genomics Consortium (NESG) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 36 90.000 90.000 120.000 112.818 112.818 115.528 C2 H3 O2 -1 59.044 ACETATE ION non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer US Proteins PSFGEY 0867 1097-0134 85 647 656 10.1002/prot.25245 28066922 X-ray crystal structure of the N-terminal region of Moloney murine leukemia virus integrase and its implications for viral DNA recognition. 2017 10.2210/pdb3nnq/pdb pdb_00003nnq 100 1 CCD 2008-10-24 MAD M x-ray 1 0.97917 1.0 0.97940 1.0 0.96863 1.0 X4A NSLS 0.97917, 0.97940, 0.96863 SYNCHROTRON NSLS BEAMLINE X4A 13707.008 N-terminal domain of Moloney murine leukemia virus integrase N-terminal domain 2 man polymer 65.409 ZINC ION 2 syn non-polymer 59.044 ACETATE ION 2 syn non-polymer 18.015 water 36 nat water Integrase p46 no yes (MSE)IENSSPYTSEHFHYTVTDIKDLTKLGAIYDKTKKYWVYQGKPV(MSE)PDQFTFELLDFLHQLTHLSFSK(MSE) KALLERSHSPYY(MSE)LNRDRTLKNITETCKACAQVNASKSLEHHHHHH MIENSSPYTSEHFHYTVTDIKDLTKLGAIYDKTKKYWVYQGKPVMPDQFTFELLDFLHQLTHLSFSKMKALLERSHSPYY MLNRDRTLKNITETCKACAQVNASKSLEHHHHHH A,B OR3 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n MoMLV sample gag-pol 11801 Moloney murine leukemia virus 469008 Escherichia coli BL21(DE3) plasmid pET21 1 2.58 52.34 VAPOR DIFFUSION, HANGING DROP 5.0 2.0 M Sodium Malonate, 0.1 M Sodium Acetate,0.05% Anapoe X-305, pH 5.0, vapor diffusion, hanging drop, temperature 298K 298 Northeast Structural Genomics Consortium NESG PSI, Protein Structure Initiative software citation database_2 pdbx_struct_conn_angle struct_conn struct_conn_type struct_ncs_dom_lim struct_site repository Initial release Version format compliance Database references Refinement description Database references Derived calculations Refinement description 1 0 2010-07-14 1 1 2011-07-13 1 2 2017-02-22 1 3 2017-11-08 1 4 2023-07-26 _citation.journal_volume _citation.page_first _citation.page_last _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.conn_type_id _struct_conn.id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn_type.id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y RCSB Y RCSB 2010-06-24 REL REL ZN ZINC ION ACT ACETATE ION HOH water ZN 201 2 ZN ZN 201 A ACT 1 3 ACT ACT 115 A ZN 201 2 ZN ZN 201 B ACT 2 3 ACT ACT 115 B HOH 26 4 HOH HOH 116 A HOH 30 4 HOH HOH 117 A HOH 31 4 HOH HOH 118 A HOH 32 4 HOH HOH 119 A HOH 33 4 HOH HOH 120 A HOH 34 4 HOH HOH 121 A HOH 40 4 HOH HOH 122 A HOH 43 4 HOH HOH 123 A HOH 2 4 HOH HOH 124 A HOH 3 4 HOH HOH 125 A HOH 5 4 HOH HOH 126 A HOH 8 4 HOH HOH 127 A HOH 9 4 HOH HOH 128 A HOH 10 4 HOH HOH 129 A HOH 11 4 HOH HOH 130 A HOH 1 4 HOH HOH 131 A HOH 13 4 HOH HOH 132 A HOH 14 4 HOH HOH 133 A HOH 16 4 HOH HOH 134 A HOH 17 4 HOH HOH 135 A HOH 18 4 HOH HOH 136 A HOH 19 4 HOH HOH 137 A HOH 20 4 HOH HOH 138 A HOH 21 4 HOH HOH 139 A HOH 4 4 HOH HOH 116 B HOH 6 4 HOH HOH 117 B HOH 7 4 HOH HOH 118 B HOH 15 4 HOH HOH 119 B HOH 22 4 HOH HOH 120 B HOH 23 4 HOH HOH 121 B HOH 24 4 HOH HOH 122 B HOH 27 4 HOH HOH 123 B HOH 28 4 HOH HOH 124 B HOH 36 4 HOH HOH 125 B HOH 37 4 HOH HOH 126 B HOH 41 4 HOH HOH 127 B n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A n 7 7 A n 8 8 A n 9 9 A n 10 10 A n 11 11 A HIS 12 n 12 HIS 12 A PHE 13 n 13 PHE 13 A HIS 14 n 14 HIS 14 A TYR 15 n 15 TYR 15 A THR 16 n 16 THR 16 A VAL 17 n 17 VAL 17 A THR 18 n 18 THR 18 A ASP 19 n 19 ASP 19 A ILE 20 n 20 ILE 20 A LYS 21 n 21 LYS 21 A ASP 22 n 22 ASP 22 A LEU 23 n 23 LEU 23 A THR 24 n 24 THR 24 A LYS 25 n 25 LYS 25 A LEU 26 n 26 LEU 26 A GLY 27 n 27 GLY 27 A ALA 28 n 28 ALA 28 A ILE 29 n 29 ILE 29 A TYR 30 n 30 TYR 30 A ASP 31 n 31 ASP 31 A LYS 32 n 32 LYS 32 A THR 33 n 33 THR 33 A LYS 34 n 34 LYS 34 A LYS 35 n 35 LYS 35 A TYR 36 n 36 TYR 36 A TRP 37 n 37 TRP 37 A VAL 38 n 38 VAL 38 A TYR 39 n 39 TYR 39 A GLN 40 n 40 GLN 40 A GLY 41 n 41 GLY 41 A LYS 42 n 42 LYS 42 A PRO 43 n 43 PRO 43 A VAL 44 n 44 VAL 44 A MSE 45 n 45 MSE 45 A PRO 46 n 46 PRO 46 A ASP 47 n 47 ASP 47 A GLN 48 n 48 GLN 48 A PHE 49 n 49 PHE 49 A THR 50 n 50 THR 50 A PHE 51 n 51 PHE 51 A GLU 52 n 52 GLU 52 A LEU 53 n 53 LEU 53 A LEU 54 n 54 LEU 54 A ASP 55 n 55 ASP 55 A PHE 56 n 56 PHE 56 A LEU 57 n 57 LEU 57 A HIS 58 n 58 HIS 58 A GLN 59 n 59 GLN 59 A LEU 60 n 60 LEU 60 A THR 61 n 61 THR 61 A HIS 62 n 62 HIS 62 A LEU 63 n 63 LEU 63 A SER 64 n 64 SER 64 A PHE 65 n 65 PHE 65 A SER 66 n 66 SER 66 A LYS 67 n 67 LYS 67 A MSE 68 n 68 MSE 68 A LYS 69 n 69 LYS 69 A ALA 70 n 70 ALA 70 A LEU 71 n 71 LEU 71 A LEU 72 n 72 LEU 72 A GLU 73 n 73 GLU 73 A ARG 74 n 74 ARG 74 A SER 75 n 75 SER 75 A HIS 76 n 76 HIS 76 A SER 77 n 77 SER 77 A PRO 78 n 78 PRO 78 A TYR 79 n 79 TYR 79 A TYR 80 n 80 TYR 80 A MSE 81 n 81 MSE 81 A LEU 82 n 82 LEU 82 A ASN 83 n 83 ASN 83 A ARG 84 n 84 ARG 84 A ASP 85 n 85 ASP 85 A ARG 86 n 86 ARG 86 A THR 87 n 87 THR 87 A LEU 88 n 88 LEU 88 A LYS 89 n 89 LYS 89 A ASN 90 n 90 ASN 90 A ILE 91 n 91 ILE 91 A THR 92 n 92 THR 92 A GLU 93 n 93 GLU 93 A THR 94 n 94 THR 94 A CYS 95 n 95 CYS 95 A LYS 96 n 96 LYS 96 A ALA 97 n 97 ALA 97 A CYS 98 n 98 CYS 98 A ALA 99 n 99 ALA 99 A GLN 100 n 100 GLN 100 A VAL 101 n 101 VAL 101 A ASN 102 n 102 ASN 102 A ALA 103 n 103 ALA 103 A SER 104 n 104 SER 104 A LYS 105 n 105 LYS 105 A SER 106 n 106 SER 106 A n 107 107 A n 108 108 A n 109 109 A n 110 110 A n 111 111 A n 112 112 A n 113 113 A n 114 114 A n 1 1 B n 2 2 B n 3 3 B n 4 4 B n 5 5 B n 6 6 B n 7 7 B n 8 8 B n 9 9 B n 10 10 B n 11 11 B HIS 12 n 12 HIS 12 B PHE 13 n 13 PHE 13 B HIS 14 n 14 HIS 14 B TYR 15 n 15 TYR 15 B THR 16 n 16 THR 16 B VAL 17 n 17 VAL 17 B THR 18 n 18 THR 18 B ASP 19 n 19 ASP 19 B ILE 20 n 20 ILE 20 B LYS 21 n 21 LYS 21 B ASP 22 n 22 ASP 22 B LEU 23 n 23 LEU 23 B THR 24 n 24 THR 24 B LYS 25 n 25 LYS 25 B LEU 26 n 26 LEU 26 B GLY 27 n 27 GLY 27 B ALA 28 n 28 ALA 28 B ILE 29 n 29 ILE 29 B TYR 30 n 30 TYR 30 B ASP 31 n 31 ASP 31 B LYS 32 n 32 LYS 32 B THR 33 n 33 THR 33 B LYS 34 n 34 LYS 34 B LYS 35 n 35 LYS 35 B TYR 36 n 36 TYR 36 B TRP 37 n 37 TRP 37 B VAL 38 n 38 VAL 38 B TYR 39 n 39 TYR 39 B GLN 40 n 40 GLN 40 B GLY 41 n 41 GLY 41 B LYS 42 n 42 LYS 42 B PRO 43 n 43 PRO 43 B VAL 44 n 44 VAL 44 B MSE 45 n 45 MSE 45 B PRO 46 n 46 PRO 46 B ASP 47 n 47 ASP 47 B GLN 48 n 48 GLN 48 B PHE 49 n 49 PHE 49 B THR 50 n 50 THR 50 B PHE 51 n 51 PHE 51 B GLU 52 n 52 GLU 52 B LEU 53 n 53 LEU 53 B LEU 54 n 54 LEU 54 B ASP 55 n 55 ASP 55 B PHE 56 n 56 PHE 56 B LEU 57 n 57 LEU 57 B HIS 58 n 58 HIS 58 B GLN 59 n 59 GLN 59 B LEU 60 n 60 LEU 60 B THR 61 n 61 THR 61 B HIS 62 n 62 HIS 62 B LEU 63 n 63 LEU 63 B SER 64 n 64 SER 64 B PHE 65 n 65 PHE 65 B SER 66 n 66 SER 66 B LYS 67 n 67 LYS 67 B MSE 68 n 68 MSE 68 B LYS 69 n 69 LYS 69 B ALA 70 n 70 ALA 70 B LEU 71 n 71 LEU 71 B LEU 72 n 72 LEU 72 B GLU 73 n 73 GLU 73 B ARG 74 n 74 ARG 74 B SER 75 n 75 SER 75 B HIS 76 n 76 HIS 76 B SER 77 n 77 SER 77 B PRO 78 n 78 PRO 78 B TYR 79 n 79 TYR 79 B TYR 80 n 80 TYR 80 B MSE 81 n 81 MSE 81 B LEU 82 n 82 LEU 82 B ASN 83 n 83 ASN 83 B ARG 84 n 84 ARG 84 B ASP 85 n 85 ASP 85 B ARG 86 n 86 ARG 86 B THR 87 n 87 THR 87 B LEU 88 n 88 LEU 88 B LYS 89 n 89 LYS 89 B ASN 90 n 90 ASN 90 B ILE 91 n 91 ILE 91 B THR 92 n 92 THR 92 B GLU 93 n 93 GLU 93 B THR 94 n 94 THR 94 B CYS 95 n 95 CYS 95 B LYS 96 n 96 LYS 96 B ALA 97 n 97 ALA 97 B CYS 98 n 98 CYS 98 B ALA 99 n 99 ALA 99 B GLN 100 n 100 GLN 100 B VAL 101 n 101 VAL 101 B ASN 102 n 102 ASN 102 B ALA 103 n 103 ALA 103 B SER 104 n 104 SER 104 B LYS 105 n 105 LYS 105 B SER 106 n 106 SER 106 B n 107 107 B n 108 108 B n 109 109 B n 110 110 B n 111 111 B n 112 112 B n 113 113 B n 114 114 B 0.3048 0.1310 -0.0972 0.5822 -0.3563 0.3986 0.3150 -0.4332 0.7309 0.2706 0.3043 -0.2965 -0.3942 -0.0563 0.2568 0.1463 0.0896 0.1260 0.6774 -0.4002 0.4821 refined -31.1161 -20.6544 23.5604 X-RAY DIFFRACTION 0.3001 0.1759 -0.1967 0.7879 -0.4916 0.3207 0.2510 0.7394 -0.1844 -0.3199 -0.3588 -0.7932 0.1152 -0.3588 -0.0209 0.3102 0.0220 0.1384 0.9028 -0.4470 0.6654 refined 0.7430 -34.6497 6.9312 X-RAY DIFFRACTION A 12 A 201 X-RAY DIFFRACTION 1 chain A B 12 B 201 X-RAY DIFFRACTION 2 chain B software_defined_assembly PISA 4 tetrameric 4800 -42 23930 A HIS 58 A NE2 HIS 58 1_555 A ZN 201 C ZN ZN 1_555 A HIS 62 A ND1 HIS 62 1_555 114.5 A HIS 58 A NE2 HIS 58 1_555 A ZN 201 C ZN ZN 1_555 A CYS 95 A SG CYS 95 1_555 100.3 A HIS 62 A ND1 HIS 62 1_555 A ZN 201 C ZN ZN 1_555 A CYS 95 A SG CYS 95 1_555 98.7 A HIS 58 A NE2 HIS 58 1_555 A ZN 201 C ZN ZN 1_555 A CYS 98 A SG CYS 98 1_555 94.8 A HIS 62 A ND1 HIS 62 1_555 A ZN 201 C ZN ZN 1_555 A CYS 98 A SG CYS 98 1_555 132.7 A CYS 95 A SG CYS 95 1_555 A ZN 201 C ZN ZN 1_555 A CYS 98 A SG CYS 98 1_555 112.2 B HIS 58 B NE2 HIS 58 1_555 B ZN 201 E ZN ZN 1_555 B HIS 62 B ND1 HIS 62 1_555 111.6 B HIS 58 B NE2 HIS 58 1_555 B ZN 201 E ZN ZN 1_555 B CYS 95 B SG CYS 95 1_555 97.1 B HIS 62 B ND1 HIS 62 1_555 B ZN 201 E ZN ZN 1_555 B CYS 95 B SG CYS 95 1_555 96.5 B HIS 58 B NE2 HIS 58 1_555 B ZN 201 E ZN ZN 1_555 B CYS 98 B SG CYS 98 1_555 95.1 B HIS 62 B ND1 HIS 62 1_555 B ZN 201 E ZN ZN 1_555 B CYS 98 B SG CYS 98 1_555 136.7 B CYS 95 B SG CYS 95 1_555 B ZN 201 E ZN ZN 1_555 B CYS 98 B SG CYS 98 1_555 113.7 A MSE 45 SELENOMETHIONINE A MSE 45 MET A MSE 68 SELENOMETHIONINE A MSE 68 MET A MSE 81 SELENOMETHIONINE A MSE 81 MET B MSE 45 SELENOMETHIONINE B MSE 45 MET B MSE 68 SELENOMETHIONINE B MSE 68 MET B MSE 81 SELENOMETHIONINE B MSE 81 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 11_445 x-y-1/3,-y-2/3,-z+1/3 crystal symmetry operation 0.0000000000 -65.1355026694 38.5093333333 A N ILE 29 A N ILE 29 A O VAL 38 A O VAL 38 A N TRP 37 A N TRP 37 A O VAL 44 A O VAL 44 A N MSE 45 A N MSE 45 A O TYR 80 A O TYR 80 B N ILE 29 B N ILE 29 B O VAL 38 B O VAL 38 B N TRP 37 B N TRP 37 B O VAL 44 B O VAL 44 B N MSE 45 B N MSE 45 B O TYR 80 B O TYR 80 1 A HOH 136 G HOH 1 A MSE 1 A MSE 1 1 Y 1 A ILE 2 A ILE 2 1 Y 1 A GLU 3 A GLU 3 1 Y 1 A ASN 4 A ASN 4 1 Y 1 A SER 5 A SER 5 1 Y 1 A SER 6 A SER 6 1 Y 1 A PRO 7 A PRO 7 1 Y 1 A TYR 8 A TYR 8 1 Y 1 A THR 9 A THR 9 1 Y 1 A SER 10 A SER 10 1 Y 1 A GLU 11 A GLU 11 1 Y 1 A LEU 107 A LEU 107 1 Y 1 A GLU 108 A GLU 108 1 Y 1 A HIS 109 A HIS 109 1 Y 1 A HIS 110 A HIS 110 1 Y 1 A HIS 111 A HIS 111 1 Y 1 A HIS 112 A HIS 112 1 Y 1 A HIS 113 A HIS 113 1 Y 1 A HIS 114 A HIS 114 1 Y 1 B MSE 1 B MSE 1 1 Y 1 B ILE 2 B ILE 2 1 Y 1 B GLU 3 B GLU 3 1 Y 1 B ASN 4 B ASN 4 1 Y 1 B SER 5 B SER 5 1 Y 1 B SER 6 B SER 6 1 Y 1 B PRO 7 B PRO 7 1 Y 1 B TYR 8 B TYR 8 1 Y 1 B THR 9 B THR 9 1 Y 1 B SER 10 B SER 10 1 Y 1 B GLU 11 B GLU 11 1 Y 1 B LEU 107 B LEU 107 1 Y 1 B GLU 108 B GLU 108 1 Y 1 B HIS 109 B HIS 109 1 Y 1 B HIS 110 B HIS 110 1 Y 1 B HIS 111 B HIS 111 1 Y 1 B HIS 112 B HIS 112 1 Y 1 B HIS 113 B HIS 113 1 Y 1 B HIS 114 B HIS 114 1 Y 1 A LYS 35 81.86 -7.89 1 A PRO 46 -48.26 166.09 1 B LYS 35 82.07 -8.07 192.720 94.1634 15.220 -3.7665 0.0000 0.0000 -3.7665 0.0000 7.5329 0.2744 0.2292 0.2337 2.6930 49.7240 783 7989 7829 10.0000 97.7400 1.000 0.500 0.4200 10% data, random 1 0.000 MAD 0.0400 0.4000 Engh & Huber FLAT BULK SOLVENT MODEL 88.8650 0.3840 2.6930 49.7240 36 1620 10 0 1574 0.004 1628 0.674 2194 0.048 240 0.002 268 13.741 598 1 A 1 772 X-RAY DIFFRACTION POSITIONAL 0.015 2 B 1 772 X-RAY DIFFRACTION POSITIONAL 0.015 0.3573 0.3091 2.8622 118 1067 1185 6 90.0000 0.3442 0.2872 3.0831 131 1172 1303 6 99.0000 0.3201 0.2740 3.3933 132 1187 1319 6 100.0000 0.2720 0.2213 3.8842 131 1183 1314 6 99.0000 0.2630 0.1916 4.8930 134 1201 1335 6 100.0000 0.2383 0.2178 49.7323 137 1236 1373 6 98.0000 74.8 2.693 50 3NNQ 7989 2.0 2 0.1 1 44.1 10.2 99.8 0.886 2.70 2.80 3.43 795 1 9.6 100 data reduction Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ DENZO package data scaling Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ SCALEPACK package phasing Tom Terwilliger terwilliger@LANL.gov http://www.solve.lanl.gov/ SOLVE program refinement Paul D. Adams PDAdams@lbl.gov C++ http://www.phenix-online.org/ PHENIX package dev_403 data extraction PDB deposit@deposit.rcsb.org June 10, 2010 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.10 data collection ADSC Quantum data reduction HKL-2000 data scaling HKL-2000 N Crystal Structure of the N-terminal domain of Moloney murine leukemia virus integrase, Northeast Structural Genomics Consortium Target OR3 1 N N 1 N N 2 N N 3 N N 2 N N 3 N N 4 N N 4 N N Authors state that the biological unit is a dimer, not a tetramer. The dimer in the asymmetric unit may not be the real dimer in solution, however. A THR 16 A THR 16 HELX_P A GLY 27 A GLY 27 1 1 12 A PRO 46 A PRO 46 HELX_P A HIS 62 A HIS 62 1 2 17 A SER 64 A SER 64 HELX_P A HIS 76 A HIS 76 1 3 13 A ASN 83 A ASN 83 HELX_P A CYS 95 A CYS 95 1 4 13 A CYS 95 A CYS 95 HELX_P A ALA 103 A ALA 103 1 5 9 B THR 16 B THR 16 HELX_P B GLY 27 B GLY 27 1 6 12 B PRO 46 B PRO 46 HELX_P B HIS 62 B HIS 62 1 7 17 B SER 64 B SER 64 HELX_P B HIS 76 B HIS 76 1 8 13 B ASN 83 B ASN 83 HELX_P B CYS 95 B CYS 95 1 9 13 B CYS 95 B CYS 95 HELX_P B ALA 103 B ALA 103 1 10 9 covale 1.327 both A VAL 44 A C VAL 44 1_555 A MSE 45 A N MSE 45 1_555 covale 1.346 both A MSE 45 A C MSE 45 1_555 A PRO 46 A N PRO 46 1_555 covale 1.329 both A LYS 67 A C LYS 67 1_555 A MSE 68 A N MSE 68 1_555 covale 1.329 both A MSE 68 A C MSE 68 1_555 A LYS 69 A N LYS 69 1_555 covale 1.329 both A TYR 80 A C TYR 80 1_555 A MSE 81 A N MSE 81 1_555 covale 1.329 both A MSE 81 A C MSE 81 1_555 A LEU 82 A N LEU 82 1_555 covale 1.327 both B VAL 44 B C VAL 44 1_555 B MSE 45 B N MSE 45 1_555 covale 1.347 both B MSE 45 B C MSE 45 1_555 B PRO 46 B N PRO 46 1_555 covale 1.330 both B LYS 67 B C LYS 67 1_555 B MSE 68 B N MSE 68 1_555 covale 1.329 both B MSE 68 B C MSE 68 1_555 B LYS 69 B N LYS 69 1_555 covale 1.330 both B TYR 80 B C TYR 80 1_555 B MSE 81 B N MSE 81 1_555 covale 1.328 both B MSE 81 B C MSE 81 1_555 B LEU 82 B N LEU 82 1_555 metalc 2.052 A HIS 58 A NE2 HIS 58 1_555 A ZN 201 C ZN ZN 1_555 metalc 2.061 A HIS 62 A ND1 HIS 62 1_555 A ZN 201 C ZN ZN 1_555 metalc 2.279 A CYS 95 A SG CYS 95 1_555 A ZN 201 C ZN ZN 1_555 metalc 2.332 A CYS 98 A SG CYS 98 1_555 A ZN 201 C ZN ZN 1_555 metalc 2.090 B HIS 58 B NE2 HIS 58 1_555 B ZN 201 E ZN ZN 1_555 metalc 2.067 B HIS 62 B ND1 HIS 62 1_555 B ZN 201 E ZN ZN 1_555 metalc 2.304 B CYS 95 B SG CYS 95 1_555 B ZN 201 E ZN ZN 1_555 metalc 2.281 B CYS 98 B SG CYS 98 1_555 B ZN 201 E ZN ZN 1_555 VIRAL PROTEIN retroviral integrase, Zn finger, Moloney murine leukemia virus, structural genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, VIRAL PROTEIN A B A HIS 12 A HIS 12 A SER 104 A SER 104 chain A and (resseq 12:104 ) B HIS 12 B HIS 12 B SER 104 B SER 104 chain B and (resseq 12:104 ) POL_MLVMO UNP 1 1331 P03355 IENSSPYTSEHFHYTVTDIKDLTKLGAIYDKTKKYWVYQGKPVMPDQFTFELLDFLHQLTHLSFSKMKALLERSHSPYYM LNRDRTLKNITETCKACAQVNASKS 1331 1435 3NNQ 2 106 P03355 A 1 2 106 1331 1435 3NNQ 2 106 P03355 B 1 2 106 1 expression tag MSE 1 3NNQ A P03355 UNP 1 1 expression tag LEU 107 3NNQ A P03355 UNP 107 1 expression tag GLU 108 3NNQ A P03355 UNP 108 1 expression tag HIS 109 3NNQ A P03355 UNP 109 1 expression tag HIS 110 3NNQ A P03355 UNP 110 1 expression tag HIS 111 3NNQ A P03355 UNP 111 1 expression tag HIS 112 3NNQ A P03355 UNP 112 1 expression tag HIS 113 3NNQ A P03355 UNP 113 1 expression tag HIS 114 3NNQ A P03355 UNP 114 2 expression tag MSE 1 3NNQ B P03355 UNP 1 2 expression tag LEU 107 3NNQ B P03355 UNP 107 2 expression tag GLU 108 3NNQ B P03355 UNP 108 2 expression tag HIS 109 3NNQ B P03355 UNP 109 2 expression tag HIS 110 3NNQ B P03355 UNP 110 2 expression tag HIS 111 3NNQ B P03355 UNP 111 2 expression tag HIS 112 3NNQ B P03355 UNP 112 2 expression tag HIS 113 3NNQ B P03355 UNP 113 2 expression tag HIS 114 3NNQ B P03355 UNP 114 4 4 anti-parallel anti-parallel parallel anti-parallel anti-parallel parallel A ILE 29 A ILE 29 A ASP 31 A ASP 31 A TYR 36 A TYR 36 A TYR 39 A TYR 39 A LYS 42 A LYS 42 A MSE 45 A MSE 45 A TYR 80 A TYR 80 A MSE 81 A MSE 81 B ILE 29 B ILE 29 B ASP 31 B ASP 31 B TYR 36 B TYR 36 B TYR 39 B TYR 39 B LYS 42 B LYS 42 B MSE 45 B MSE 45 B TYR 80 B TYR 80 B MSE 81 B MSE 81 BINDING SITE FOR RESIDUE ZN A 201 A ZN 201 Software 4 BINDING SITE FOR RESIDUE ACT A 115 A ACT 115 Software 3 BINDING SITE FOR RESIDUE ZN B 201 B ZN 201 Software 4 BINDING SITE FOR RESIDUE ACT B 115 B ACT 115 Software 3 A HIS 58 A HIS 58 4 1_555 A HIS 62 A HIS 62 4 1_555 A CYS 95 A CYS 95 4 1_555 A CYS 98 A CYS 98 4 1_555 A LEU 71 A LEU 71 3 1_555 A ARG 74 A ARG 74 3 1_555 A HOH 124 G HOH 3 1_555 B HIS 58 B HIS 58 4 1_555 B HIS 62 B HIS 62 4 1_555 B CYS 95 B CYS 95 4 1_555 B CYS 98 B CYS 98 4 1_555 B LEU 71 B LEU 71 3 1_555 B HOH 116 H HOH 3 1_555 B HOH 124 H HOH 3 1_555 155 H 3 2