0.008709 0.000000 0.000000 0.000000 0.009973 0.000000 0.000000 0.000000 0.021206 0.00000 0.00000 0.00000 Zhang, H. Hu, T. Li, L. Zhou, R. Chen, L. Hu, L. Jiang, H. Shen, X. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 114.828 100.271 47.157 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 R C N 309 N O N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N N Y 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C N 359 N O N 360 N O N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 N C N 377 N C N 378 N C N 379 N O N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing US J.Biol.Chem. JBCHA3 0071 0021-9258 286 1868 1875 10.1074/jbc.M110.166215 21084305 Danthron functions as a retinoic X receptor antagonist by stabilizing tetramers of the receptor. 2011 10.2210/pdb3nsp/pdb pdb_00003nsp 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 IMAGE PLATE 2009-06-03 RIGAKU RAXIS IV++ SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU 26856.039 Retinoid X receptor, alpha ligand binding domain 2 man polymer 18.015 water 34 nat water Retinoid X receptor, alpha, isoform CRA_b no no TSSANEDMPVERILEAELAVEPKTETYVEANMGLNPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLR AGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKG LSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT TSSANEDMPVERILEAELAVEPKTETYVEANMGLNPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLR AGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKG LSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample RXRA, NR2B1, RP11-473E2.1-002, hCG_18150 9606 Homo sapiens 562 Escherichia coli 1 2.53 51.33 VAPOR DIFFUSION, HANGING DROP 6.5 100mM Tris, pH6.5, 10% PEG 4000, 5% glycerol, VAPOR DIFFUSION, HANGING DROP, temperature 277K 277 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Version format compliance Database references Data collection Database references Refinement description 1 0 2010-11-17 1 1 2011-07-13 1 2 2012-04-11 1 3 2023-11-01 _database_2.pdbx_DOI _database_2.pdbx_database_accession RCSB Y PDBJ 2010-07-02 REL REL HOH water 1G1U PDB experimental model HOH 1 2 HOH HOH 1 A HOH 2 2 HOH HOH 2 A HOH 6 2 HOH HOH 6 A HOH 7 2 HOH HOH 7 A HOH 8 2 HOH HOH 8 A HOH 9 2 HOH HOH 9 A HOH 10 2 HOH HOH 10 A HOH 14 2 HOH HOH 14 A HOH 19 2 HOH HOH 19 A HOH 21 2 HOH HOH 21 A HOH 22 2 HOH HOH 22 A HOH 23 2 HOH HOH 23 A HOH 24 2 HOH HOH 24 A HOH 25 2 HOH HOH 25 A HOH 28 2 HOH HOH 28 A HOH 29 2 HOH HOH 29 A HOH 30 2 HOH HOH 30 A HOH 33 2 HOH HOH 33 A HOH 34 2 HOH HOH 34 A HOH 3 2 HOH HOH 3 B HOH 4 2 HOH HOH 4 B HOH 5 2 HOH HOH 5 B HOH 11 2 HOH HOH 11 B HOH 12 2 HOH HOH 12 B HOH 13 2 HOH HOH 13 B HOH 15 2 HOH HOH 15 B HOH 16 2 HOH HOH 16 B HOH 17 2 HOH HOH 17 B HOH 18 2 HOH HOH 18 B HOH 20 2 HOH HOH 20 B HOH 26 2 HOH HOH 26 B HOH 27 2 HOH HOH 27 B HOH 31 2 HOH HOH 31 B HOH 32 2 HOH HOH 32 B n 1 223 A n 2 224 A n 3 225 A n 4 226 A n 5 227 A n 6 228 A n 7 229 A n 8 230 A n 9 231 A n 10 232 A n 11 233 A n 12 234 A n 13 235 A n 14 236 A n 15 237 A n 16 238 A n 17 239 A n 18 240 A n 19 241 A n 20 242 A n 21 243 A n 22 244 A n 23 245 A n 24 246 A n 25 247 A n 26 248 A n 27 249 A n 28 250 A n 29 251 A n 30 252 A n 31 253 A n 32 254 A n 33 255 A n 34 256 A n 35 257 A n 36 258 A n 37 259 A n 38 260 A n 39 261 A n 40 262 A ASP 263 n 41 ASP 263 A PRO 264 n 42 PRO 264 A VAL 265 n 43 VAL 265 A THR 266 n 44 THR 266 A ASN 267 n 45 ASN 267 A ILE 268 n 46 ILE 268 A CYS 269 n 47 CYS 269 A GLN 270 n 48 GLN 270 A ALA 271 n 49 ALA 271 A ALA 272 n 50 ALA 272 A ASP 273 n 51 ASP 273 A LYS 274 n 52 LYS 274 A GLN 275 n 53 GLN 275 A LEU 276 n 54 LEU 276 A PHE 277 n 55 PHE 277 A THR 278 n 56 THR 278 A LEU 279 n 57 LEU 279 A VAL 280 n 58 VAL 280 A GLU 281 n 59 GLU 281 A TRP 282 n 60 TRP 282 A ALA 283 n 61 ALA 283 A LYS 284 n 62 LYS 284 A ARG 285 n 63 ARG 285 A ILE 286 n 64 ILE 286 A PRO 287 n 65 PRO 287 A HIS 288 n 66 HIS 288 A PHE 289 n 67 PHE 289 A SER 290 n 68 SER 290 A GLU 291 n 69 GLU 291 A LEU 292 n 70 LEU 292 A PRO 293 n 71 PRO 293 A LEU 294 n 72 LEU 294 A ASP 295 n 73 ASP 295 A ASP 296 n 74 ASP 296 A GLN 297 n 75 GLN 297 A VAL 298 n 76 VAL 298 A ILE 299 n 77 ILE 299 A LEU 300 n 78 LEU 300 A LEU 301 n 79 LEU 301 A ARG 302 n 80 ARG 302 A ALA 303 n 81 ALA 303 A GLY 304 n 82 GLY 304 A TRP 305 n 83 TRP 305 A ASN 306 n 84 ASN 306 A GLU 307 n 85 GLU 307 A LEU 308 n 86 LEU 308 A LEU 309 n 87 LEU 309 A ILE 310 n 88 ILE 310 A ALA 311 n 89 ALA 311 A SER 312 n 90 SER 312 A PHE 313 n 91 PHE 313 A SER 314 n 92 SER 314 A HIS 315 n 93 HIS 315 A ARG 316 n 94 ARG 316 A SER 317 n 95 SER 317 A ILE 318 n 96 ILE 318 A ALA 319 n 97 ALA 319 A VAL 320 n 98 VAL 320 A LYS 321 n 99 LYS 321 A ASP 322 n 100 ASP 322 A GLY 323 n 101 GLY 323 A ILE 324 n 102 ILE 324 A LEU 325 n 103 LEU 325 A LEU 326 n 104 LEU 326 A ALA 327 n 105 ALA 327 A THR 328 n 106 THR 328 A GLY 329 n 107 GLY 329 A LEU 330 n 108 LEU 330 A HIS 331 n 109 HIS 331 A VAL 332 n 110 VAL 332 A HIS 333 n 111 HIS 333 A ARG 334 n 112 ARG 334 A ASN 335 n 113 ASN 335 A SER 336 n 114 SER 336 A ALA 337 n 115 ALA 337 A HIS 338 n 116 HIS 338 A SER 339 n 117 SER 339 A ALA 340 n 118 ALA 340 A GLY 341 n 119 GLY 341 A VAL 342 n 120 VAL 342 A GLY 343 n 121 GLY 343 A ALA 344 n 122 ALA 344 A ILE 345 n 123 ILE 345 A PHE 346 n 124 PHE 346 A ASP 347 n 125 ASP 347 A ARG 348 n 126 ARG 348 A VAL 349 n 127 VAL 349 A LEU 350 n 128 LEU 350 A THR 351 n 129 THR 351 A GLU 352 n 130 GLU 352 A LEU 353 n 131 LEU 353 A VAL 354 n 132 VAL 354 A SER 355 n 133 SER 355 A LYS 356 n 134 LYS 356 A MET 357 n 135 MET 357 A ARG 358 n 136 ARG 358 A ASP 359 n 137 ASP 359 A MET 360 n 138 MET 360 A GLN 361 n 139 GLN 361 A MET 362 n 140 MET 362 A ASP 363 n 141 ASP 363 A LYS 364 n 142 LYS 364 A THR 365 n 143 THR 365 A GLU 366 n 144 GLU 366 A LEU 367 n 145 LEU 367 A GLY 368 n 146 GLY 368 A CYS 369 n 147 CYS 369 A LEU 370 n 148 LEU 370 A ARG 371 n 149 ARG 371 A ALA 372 n 150 ALA 372 A ILE 373 n 151 ILE 373 A VAL 374 n 152 VAL 374 A LEU 375 n 153 LEU 375 A PHE 376 n 154 PHE 376 A ASN 377 n 155 ASN 377 A PRO 378 n 156 PRO 378 A ASP 379 n 157 ASP 379 A SER 380 n 158 SER 380 A LYS 381 n 159 LYS 381 A GLY 382 n 160 GLY 382 A LEU 383 n 161 LEU 383 A SER 384 n 162 SER 384 A ASN 385 n 163 ASN 385 A PRO 386 n 164 PRO 386 A ALA 387 n 165 ALA 387 A GLU 388 n 166 GLU 388 A VAL 389 n 167 VAL 389 A GLU 390 n 168 GLU 390 A ALA 391 n 169 ALA 391 A LEU 392 n 170 LEU 392 A ARG 393 n 171 ARG 393 A GLU 394 n 172 GLU 394 A LYS 395 n 173 LYS 395 A VAL 396 n 174 VAL 396 A TYR 397 n 175 TYR 397 A ALA 398 n 176 ALA 398 A SER 399 n 177 SER 399 A LEU 400 n 178 LEU 400 A GLU 401 n 179 GLU 401 A ALA 402 n 180 ALA 402 A TYR 403 n 181 TYR 403 A CYS 404 n 182 CYS 404 A LYS 405 n 183 LYS 405 A HIS 406 n 184 HIS 406 A LYS 407 n 185 LYS 407 A TYR 408 n 186 TYR 408 A PRO 409 n 187 PRO 409 A GLU 410 n 188 GLU 410 A GLN 411 n 189 GLN 411 A PRO 412 n 190 PRO 412 A GLY 413 n 191 GLY 413 A ARG 414 n 192 ARG 414 A PHE 415 n 193 PHE 415 A ALA 416 n 194 ALA 416 A LYS 417 n 195 LYS 417 A LEU 418 n 196 LEU 418 A LEU 419 n 197 LEU 419 A LEU 420 n 198 LEU 420 A ARG 421 n 199 ARG 421 A LEU 422 n 200 LEU 422 A PRO 423 n 201 PRO 423 A ALA 424 n 202 ALA 424 A LEU 425 n 203 LEU 425 A ARG 426 n 204 ARG 426 A SER 427 n 205 SER 427 A ILE 428 n 206 ILE 428 A GLY 429 n 207 GLY 429 A LEU 430 n 208 LEU 430 A LYS 431 n 209 LYS 431 A CYS 432 n 210 CYS 432 A LEU 433 n 211 LEU 433 A GLU 434 n 212 GLU 434 A HIS 435 n 213 HIS 435 A LEU 436 n 214 LEU 436 A PHE 437 n 215 PHE 437 A PHE 438 n 216 PHE 438 A PHE 439 n 217 PHE 439 A LYS 440 n 218 LYS 440 A LEU 441 n 219 LEU 441 A ILE 442 n 220 ILE 442 A GLY 443 n 221 GLY 443 A ASP 444 n 222 ASP 444 A THR 445 n 223 THR 445 A PRO 446 n 224 PRO 446 A ILE 447 n 225 ILE 447 A ASP 448 n 226 ASP 448 A THR 449 n 227 THR 449 A PHE 450 n 228 PHE 450 A LEU 451 n 229 LEU 451 A MET 452 n 230 MET 452 A GLU 453 n 231 GLU 453 A MET 454 n 232 MET 454 A LEU 455 n 233 LEU 455 A n 234 456 A n 235 457 A n 236 458 A n 237 459 A n 238 460 A n 239 461 A n 240 462 A n 1 223 B n 2 224 B n 3 225 B n 4 226 B n 5 227 B n 6 228 B n 7 229 B n 8 230 B n 9 231 B n 10 232 B n 11 233 B n 12 234 B n 13 235 B n 14 236 B n 15 237 B n 16 238 B n 17 239 B n 18 240 B n 19 241 B n 20 242 B n 21 243 B n 22 244 B n 23 245 B n 24 246 B n 25 247 B n 26 248 B n 27 249 B n 28 250 B n 29 251 B n 30 252 B n 31 253 B n 32 254 B n 33 255 B n 34 256 B n 35 257 B n 36 258 B n 37 259 B n 38 260 B n 39 261 B n 40 262 B n 41 263 B n 42 264 B n 43 265 B n 44 266 B n 45 267 B n 46 268 B n 47 269 B GLN 270 n 48 GLN 270 B ALA 271 n 49 ALA 271 B ALA 272 n 50 ALA 272 B ASP 273 n 51 ASP 273 B LYS 274 n 52 LYS 274 B GLN 275 n 53 GLN 275 B LEU 276 n 54 LEU 276 B PHE 277 n 55 PHE 277 B THR 278 n 56 THR 278 B LEU 279 n 57 LEU 279 B VAL 280 n 58 VAL 280 B GLU 281 n 59 GLU 281 B TRP 282 n 60 TRP 282 B ALA 283 n 61 ALA 283 B LYS 284 n 62 LYS 284 B ARG 285 n 63 ARG 285 B ILE 286 n 64 ILE 286 B PRO 287 n 65 PRO 287 B HIS 288 n 66 HIS 288 B PHE 289 n 67 PHE 289 B SER 290 n 68 SER 290 B GLU 291 n 69 GLU 291 B LEU 292 n 70 LEU 292 B PRO 293 n 71 PRO 293 B LEU 294 n 72 LEU 294 B ASP 295 n 73 ASP 295 B ASP 296 n 74 ASP 296 B GLN 297 n 75 GLN 297 B VAL 298 n 76 VAL 298 B ILE 299 n 77 ILE 299 B LEU 300 n 78 LEU 300 B LEU 301 n 79 LEU 301 B ARG 302 n 80 ARG 302 B ALA 303 n 81 ALA 303 B GLY 304 n 82 GLY 304 B TRP 305 n 83 TRP 305 B ASN 306 n 84 ASN 306 B GLU 307 n 85 GLU 307 B LEU 308 n 86 LEU 308 B LEU 309 n 87 LEU 309 B ILE 310 n 88 ILE 310 B ALA 311 n 89 ALA 311 B SER 312 n 90 SER 312 B PHE 313 n 91 PHE 313 B SER 314 n 92 SER 314 B HIS 315 n 93 HIS 315 B ARG 316 n 94 ARG 316 B SER 317 n 95 SER 317 B ILE 318 n 96 ILE 318 B ALA 319 n 97 ALA 319 B VAL 320 n 98 VAL 320 B LYS 321 n 99 LYS 321 B ASP 322 n 100 ASP 322 B GLY 323 n 101 GLY 323 B ILE 324 n 102 ILE 324 B LEU 325 n 103 LEU 325 B LEU 326 n 104 LEU 326 B n 105 327 B n 106 328 B n 107 329 B LEU 330 n 108 LEU 330 B HIS 331 n 109 HIS 331 B VAL 332 n 110 VAL 332 B HIS 333 n 111 HIS 333 B ARG 334 n 112 ARG 334 B ASN 335 n 113 ASN 335 B SER 336 n 114 SER 336 B ALA 337 n 115 ALA 337 B HIS 338 n 116 HIS 338 B SER 339 n 117 SER 339 B ALA 340 n 118 ALA 340 B GLY 341 n 119 GLY 341 B VAL 342 n 120 VAL 342 B GLY 343 n 121 GLY 343 B ALA 344 n 122 ALA 344 B ILE 345 n 123 ILE 345 B PHE 346 n 124 PHE 346 B ASP 347 n 125 ASP 347 B ARG 348 n 126 ARG 348 B VAL 349 n 127 VAL 349 B LEU 350 n 128 LEU 350 B THR 351 n 129 THR 351 B GLU 352 n 130 GLU 352 B LEU 353 n 131 LEU 353 B VAL 354 n 132 VAL 354 B SER 355 n 133 SER 355 B LYS 356 n 134 LYS 356 B MET 357 n 135 MET 357 B ARG 358 n 136 ARG 358 B ASP 359 n 137 ASP 359 B MET 360 n 138 MET 360 B GLN 361 n 139 GLN 361 B MET 362 n 140 MET 362 B ASP 363 n 141 ASP 363 B LYS 364 n 142 LYS 364 B THR 365 n 143 THR 365 B GLU 366 n 144 GLU 366 B LEU 367 n 145 LEU 367 B GLY 368 n 146 GLY 368 B CYS 369 n 147 CYS 369 B LEU 370 n 148 LEU 370 B ARG 371 n 149 ARG 371 B ALA 372 n 150 ALA 372 B ILE 373 n 151 ILE 373 B VAL 374 n 152 VAL 374 B LEU 375 n 153 LEU 375 B PHE 376 n 154 PHE 376 B ASN 377 n 155 ASN 377 B PRO 378 n 156 PRO 378 B ASP 379 n 157 ASP 379 B SER 380 n 158 SER 380 B LYS 381 n 159 LYS 381 B GLY 382 n 160 GLY 382 B LEU 383 n 161 LEU 383 B SER 384 n 162 SER 384 B ASN 385 n 163 ASN 385 B PRO 386 n 164 PRO 386 B ALA 387 n 165 ALA 387 B GLU 388 n 166 GLU 388 B VAL 389 n 167 VAL 389 B GLU 390 n 168 GLU 390 B ALA 391 n 169 ALA 391 B LEU 392 n 170 LEU 392 B ARG 393 n 171 ARG 393 B GLU 394 n 172 GLU 394 B LYS 395 n 173 LYS 395 B VAL 396 n 174 VAL 396 B TYR 397 n 175 TYR 397 B ALA 398 n 176 ALA 398 B SER 399 n 177 SER 399 B LEU 400 n 178 LEU 400 B GLU 401 n 179 GLU 401 B ALA 402 n 180 ALA 402 B TYR 403 n 181 TYR 403 B CYS 404 n 182 CYS 404 B LYS 405 n 183 LYS 405 B HIS 406 n 184 HIS 406 B LYS 407 n 185 LYS 407 B TYR 408 n 186 TYR 408 B PRO 409 n 187 PRO 409 B GLU 410 n 188 GLU 410 B GLN 411 n 189 GLN 411 B PRO 412 n 190 PRO 412 B GLY 413 n 191 GLY 413 B ARG 414 n 192 ARG 414 B PHE 415 n 193 PHE 415 B ALA 416 n 194 ALA 416 B LYS 417 n 195 LYS 417 B LEU 418 n 196 LEU 418 B LEU 419 n 197 LEU 419 B LEU 420 n 198 LEU 420 B ARG 421 n 199 ARG 421 B LEU 422 n 200 LEU 422 B PRO 423 n 201 PRO 423 B ALA 424 n 202 ALA 424 B LEU 425 n 203 LEU 425 B ARG 426 n 204 ARG 426 B SER 427 n 205 SER 427 B ILE 428 n 206 ILE 428 B GLY 429 n 207 GLY 429 B LEU 430 n 208 LEU 430 B LYS 431 n 209 LYS 431 B CYS 432 n 210 CYS 432 B LEU 433 n 211 LEU 433 B GLU 434 n 212 GLU 434 B HIS 435 n 213 HIS 435 B LEU 436 n 214 LEU 436 B PHE 437 n 215 PHE 437 B PHE 438 n 216 PHE 438 B PHE 439 n 217 PHE 439 B LYS 440 n 218 LYS 440 B LEU 441 n 219 LEU 441 B ILE 442 n 220 ILE 442 B GLY 443 n 221 GLY 443 B ASP 444 n 222 ASP 444 B THR 445 n 223 THR 445 B PRO 446 n 224 PRO 446 B ILE 447 n 225 ILE 447 B ASP 448 n 226 ASP 448 B THR 449 n 227 THR 449 B PHE 450 n 228 PHE 450 B LEU 451 n 229 LEU 451 B MET 452 n 230 MET 452 B GLU 453 n 231 GLU 453 B MET 454 n 232 MET 454 B LEU 455 n 233 LEU 455 B GLU 456 n 234 GLU 456 B ALA 457 n 235 ALA 457 B PRO 458 n 236 PRO 458 B HIS 459 n 237 HIS 459 B GLN 460 n 238 GLN 460 B MET 461 n 239 MET 461 B THR 462 n 240 THR 462 B author_and_software_defined_assembly PISA 4 tetrameric 10260 -50 36120 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_555 -x,-y,z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 324 A N ILE 102 A O VAL 332 A O VAL 110 1 A THR 223 A THR 1 1 Y 1 A SER 224 A SER 2 1 Y 1 A SER 225 A SER 3 1 Y 1 A ALA 226 A ALA 4 1 Y 1 A ASN 227 A ASN 5 1 Y 1 A GLU 228 A GLU 6 1 Y 1 A ASP 229 A ASP 7 1 Y 1 A MET 230 A MET 8 1 Y 1 A PRO 231 A PRO 9 1 Y 1 A VAL 232 A VAL 10 1 Y 1 A GLU 233 A GLU 11 1 Y 1 A ARG 234 A ARG 12 1 Y 1 A ILE 235 A ILE 13 1 Y 1 A LEU 236 A LEU 14 1 Y 1 A GLU 237 A GLU 15 1 Y 1 A ALA 238 A ALA 16 1 Y 1 A GLU 239 A GLU 17 1 Y 1 A LEU 240 A LEU 18 1 Y 1 A ALA 241 A ALA 19 1 Y 1 A VAL 242 A VAL 20 1 Y 1 A GLU 243 A GLU 21 1 Y 1 A PRO 244 A PRO 22 1 Y 1 A LYS 245 A LYS 23 1 Y 1 A THR 246 A THR 24 1 Y 1 A GLU 247 A GLU 25 1 Y 1 A THR 248 A THR 26 1 Y 1 A TYR 249 A TYR 27 1 Y 1 A VAL 250 A VAL 28 1 Y 1 A GLU 251 A GLU 29 1 Y 1 A ALA 252 A ALA 30 1 Y 1 A ASN 253 A ASN 31 1 Y 1 A MET 254 A MET 32 1 Y 1 A GLY 255 A GLY 33 1 Y 1 A LEU 256 A LEU 34 1 Y 1 A ASN 257 A ASN 35 1 Y 1 A PRO 258 A PRO 36 1 Y 1 A SER 259 A SER 37 1 Y 1 A SER 260 A SER 38 1 Y 1 A PRO 261 A PRO 39 1 Y 1 A ASN 262 A ASN 40 1 Y 1 A GLU 456 A GLU 234 1 Y 1 A ALA 457 A ALA 235 1 Y 1 A PRO 458 A PRO 236 1 Y 1 A HIS 459 A HIS 237 1 Y 1 A GLN 460 A GLN 238 1 Y 1 A MET 461 A MET 239 1 Y 1 A THR 462 A THR 240 1 Y 1 B THR 223 B THR 1 1 Y 1 B SER 224 B SER 2 1 Y 1 B SER 225 B SER 3 1 Y 1 B ALA 226 B ALA 4 1 Y 1 B ASN 227 B ASN 5 1 Y 1 B GLU 228 B GLU 6 1 Y 1 B ASP 229 B ASP 7 1 Y 1 B MET 230 B MET 8 1 Y 1 B PRO 231 B PRO 9 1 Y 1 B VAL 232 B VAL 10 1 Y 1 B GLU 233 B GLU 11 1 Y 1 B ARG 234 B ARG 12 1 Y 1 B ILE 235 B ILE 13 1 Y 1 B LEU 236 B LEU 14 1 Y 1 B GLU 237 B GLU 15 1 Y 1 B ALA 238 B ALA 16 1 Y 1 B GLU 239 B GLU 17 1 Y 1 B LEU 240 B LEU 18 1 Y 1 B ALA 241 B ALA 19 1 Y 1 B VAL 242 B VAL 20 1 Y 1 B GLU 243 B GLU 21 1 Y 1 B PRO 244 B PRO 22 1 Y 1 B LYS 245 B LYS 23 1 Y 1 B THR 246 B THR 24 1 Y 1 B GLU 247 B GLU 25 1 Y 1 B THR 248 B THR 26 1 Y 1 B TYR 249 B TYR 27 1 Y 1 B VAL 250 B VAL 28 1 Y 1 B GLU 251 B GLU 29 1 Y 1 B ALA 252 B ALA 30 1 Y 1 B ASN 253 B ASN 31 1 Y 1 B MET 254 B MET 32 1 Y 1 B GLY 255 B GLY 33 1 Y 1 B LEU 256 B LEU 34 1 Y 1 B ASN 257 B ASN 35 1 Y 1 B PRO 258 B PRO 36 1 Y 1 B SER 259 B SER 37 1 Y 1 B SER 260 B SER 38 1 Y 1 B PRO 261 B PRO 39 1 Y 1 B ASN 262 B ASN 40 1 Y 1 B ASP 263 B ASP 41 1 Y 1 B PRO 264 B PRO 42 1 Y 1 B VAL 265 B VAL 43 1 Y 1 B THR 266 B THR 44 1 Y 1 B ASN 267 B ASN 45 1 Y 1 B ILE 268 B ILE 46 1 Y 1 B CYS 269 B CYS 47 1 Y 1 B ALA 327 B ALA 105 1 Y 1 B THR 328 B THR 106 1 Y 1 B GLY 329 B GLY 107 1 Y 1 A A O O ALA HOH 327 30 2.05 1 A A OE2 O GLU HOH 390 28 2.15 1 -11.75 1.90 110.20 98.45 A A A CB CA C LEU LEU LEU 276 276 276 N 1 -10.40 1.50 110.10 99.70 A A A CB CA C ALA ALA ALA 327 327 327 N 1 17.71 2.70 111.00 128.71 B B B N CA C HIS HIS HIS 331 331 331 N 1 A LEU 276 85.19 -8.04 1 A HIS 288 71.24 -12.91 1 A LEU 326 -90.81 55.87 1 A ALA 327 61.54 -2.70 1 A THR 328 -150.95 28.56 1 B HIS 288 85.17 -4.45 1 B HIS 331 50.52 78.46 1 B ALA 340 -65.84 6.36 1 B LEU 353 -120.89 -63.97 1 B ASN 385 -160.90 70.99 1 B ASP 444 -141.13 -24.71 1 B HIS 459 -67.08 14.03 22.193 -0.57 0.00 0.00 -0.97 0.00 1.54 0.884 0.779 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.30755 0.22227 0.22627 2.90 15.00 557 10878 4.9 91.07 17.510 0.344 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.494 0.80 0.80 1.40 1G1U MAXIMUM LIKELIHOOD MASK 2.90 15.00 34 3074 0 0 3040 0.013 0.022 3105 1.527 1.980 4194 6.450 5.000 380 36.040 23.308 133 21.298 15.000 567 22.239 15.000 22 0.102 0.200 479 0.004 0.020 2288 0.249 0.200 1517 0.318 0.200 2113 0.187 0.200 95 0.256 0.200 63 0.217 0.200 6 0.548 1.500 1962 0.981 2.000 3075 1.293 3.000 1267 2.125 4.500 1119 0.347 0.249 2.973 42 808 20 96.15 2.9 29.72 3NSP 10888 1 data collection CrystalClear refinement CNS refinement REFMAC 5.2.0019 data reduction d*TREK data scaling d*TREK phasing CNS Crystal structure of tetrameric RXRalpha-LBD 1 N N 1 N N 2 N N 2 N N A ASP 263 A ASP 41 HELX_P A GLN 275 A GLN 53 1 1 13 A PHE 277 A PHE 55 HELX_P A ARG 285 A ARG 63 1 2 9 A HIS 288 A HIS 66 HELX_P A LEU 292 A LEU 70 5 3 5 A PRO 293 A PRO 71 HELX_P A SER 317 A SER 95 1 4 25 A SER 339 A SER 117 HELX_P A LEU 353 A LEU 131 1 5 15 A LEU 353 A LEU 131 HELX_P A MET 360 A MET 138 1 6 8 A ASP 363 A ASP 141 HELX_P A PHE 376 A PHE 154 1 7 14 A PRO 386 A PRO 164 HELX_P A TYR 408 A TYR 186 1 8 23 A GLY 413 A GLY 191 HELX_P A LEU 420 A LEU 198 1 9 8 A ARG 421 A ARG 199 HELX_P A HIS 435 A HIS 213 1 10 15 A LEU 436 A LEU 214 HELX_P A MET 452 A MET 230 1 11 17 B ASP 273 B ASP 51 HELX_P B ILE 286 B ILE 64 1 12 14 B HIS 288 B HIS 66 HELX_P B LEU 292 B LEU 70 5 13 5 B PRO 293 B PRO 71 HELX_P B ALA 319 B ALA 97 1 14 27 B HIS 333 B HIS 111 HELX_P B ALA 340 B ALA 118 1 15 8 B VAL 342 B VAL 120 HELX_P B LEU 353 B LEU 131 1 16 12 B LEU 353 B LEU 131 HELX_P B MET 360 B MET 138 1 17 8 B ASP 363 B ASP 141 HELX_P B PHE 376 B PHE 154 1 18 14 B ASN 385 B ASN 163 HELX_P B TYR 408 B TYR 186 1 19 24 B GLY 413 B GLY 191 HELX_P B LEU 420 B LEU 198 1 20 8 B ARG 421 B ARG 199 HELX_P B CYS 432 B CYS 210 1 21 12 B GLU 434 B GLU 212 HELX_P B PHE 439 B PHE 217 1 22 6 B LEU 441 B LEU 219 HELX_P B GLY 443 B GLY 221 5 23 3 B ASP 444 B ASP 222 HELX_P B LEU 455 B LEU 233 1 24 12 TRANSCRIPTION nuclear receptor retinoic x recepor alpha ligand binding domain, TRANSCRIPTION Q2NL52_HUMAN UNP 1 223 Q2NL52 TSSANEDMPVERILEAELAVEPKTETYVEANMGLNPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLR AGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKG LSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT 223 462 3NSP 223 462 Q2NL52 A 1 1 240 223 462 3NSP 223 462 Q2NL52 B 1 1 240 2 anti-parallel A ILE 324 A ILE 102 A LEU 325 A LEU 103 A HIS 331 A HIS 109 A VAL 332 A VAL 110 18 P 21 21 2