0.015999
0.000000
0.000000
0.000000
0.015999
0.000000
0.000000
0.000000
0.008812
0.00000
0.00000
0.00000
Fradera, X.
van Zeeland, M.
Uitdehaag, J.C.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
62.504
62.504
113.478
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C27 H28 F3 N5 O
495.539
N-benzyl-3-(2-cyano-6-propylpyrimidin-4-yl)-N-[2-(dimethylamino)ethyl]-5-(trifluoromethyl)benzamide
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
Y
250
N
C
Y
251
N
N
Y
252
N
C
Y
253
N
N
Y
254
N
C
Y
255
N
C
N
256
N
C
N
257
N
N
N
258
N
C
N
259
N
C
N
260
N
C
Y
261
N
C
Y
262
N
C
Y
263
N
C
Y
264
N
C
Y
265
N
C
Y
266
N
C
N
267
N
C
N
268
N
F
N
269
N
F
N
270
N
F
N
271
N
C
N
272
N
O
N
273
N
N
N
274
N
C
Y
275
N
C
Y
276
N
C
Y
277
N
C
Y
278
N
C
Y
279
N
C
Y
280
N
C
N
281
N
C
N
282
N
C
N
283
N
N
N
284
N
C
N
285
N
C
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
N
N
315
S
C
N
316
N
C
N
317
N
O
N
318
N
C
Y
319
N
C
Y
320
N
C
Y
321
N
C
Y
322
N
C
Y
323
N
C
Y
324
N
C
N
325
N
O
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
N
N
338
S
C
N
339
N
C
N
340
N
O
N
341
N
C
N
342
N
C
N
343
N
C
N
344
N
O
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
N
N
355
S
C
N
356
N
C
N
357
N
O
N
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
S
N
369
N
O
N
370
N
O
N
371
N
O
N
372
N
O
N
373
N
N
N
374
S
C
N
375
N
C
N
376
N
O
N
377
R
C
N
378
N
O
N
379
N
C
N
380
N
O
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
N
N
391
S
C
N
392
N
C
N
393
N
O
N
394
N
C
Y
395
N
C
Y
396
N
C
Y
397
N
C
Y
398
N
N
Y
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
N
404
N
O
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
N
N
418
S
C
N
419
N
C
N
420
N
O
N
421
N
C
Y
422
N
C
Y
423
N
C
Y
424
N
C
Y
425
N
C
Y
426
N
C
Y
427
N
C
N
428
N
O
N
429
N
O
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
N
N
442
S
C
N
443
N
C
N
444
N
O
N
445
N
C
N
446
N
C
N
447
N
C
N
448
N
O
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
Y
237
N
sing
Y
238
N
doub
Y
239
N
sing
Y
240
N
doub
Y
241
N
sing
N
242
N
sing
Y
243
N
doub
N
244
N
sing
N
245
N
trip
N
246
N
sing
N
247
N
sing
Y
248
N
sing
Y
249
N
sing
Y
250
N
doub
N
251
N
sing
Y
252
N
sing
Y
253
N
doub
Y
254
N
sing
Y
255
N
doub
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
doub
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
Y
265
N
sing
Y
266
N
doub
Y
267
N
sing
Y
268
N
doub
Y
269
N
sing
Y
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
doub
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
Y
314
N
doub
Y
315
N
sing
Y
316
N
sing
N
317
N
sing
Y
318
N
doub
N
319
N
sing
Y
320
N
doub
N
321
N
sing
Y
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
doub
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
doub
N
357
N
doub
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
doub
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
doub
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
Y
387
N
doub
Y
388
N
sing
Y
389
N
sing
N
390
N
sing
Y
391
N
doub
Y
392
N
sing
Y
393
N
sing
N
394
N
sing
Y
395
N
sing
Y
396
N
doub
N
397
N
sing
Y
398
N
doub
N
399
N
sing
Y
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
doub
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
Y
415
N
doub
Y
416
N
sing
Y
417
N
sing
N
418
N
sing
Y
419
N
doub
N
420
N
sing
Y
421
N
doub
N
422
N
sing
Y
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
doub
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
UK
Bioorg.Med.Chem.Lett.
BMCLE8
1127
0960-894X
20
6237
6241
10.1016/j.bmcl.2010.08.101
20843687
Optimisation of 2-cyano-pyrimidine inhibitors of cathepsin K: improving selectivity over hERG.
2010
10.2210/pdb3o1g/pdb
pdb_00003o1g
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
298.0
1
CCD
2007-12-07
ADSC QUANTUM 4
SINGLE WAVELENGTH
M
x-ray
1
0.93300
1.0
ID14-2
ESRF
0.93300
SYNCHROTRON
ESRF BEAMLINE ID14-2
23523.480
Cathepsin K
3.4.22.38
1
man
polymer
96.063
SULFATE ION
2
syn
non-polymer
495.539
N-benzyl-3-(2-cyano-6-propylpyrimidin-4-yl)-N-[2-(dimethylamino)ethyl]-5-(trifluoromethyl)benzamide
1
syn
non-polymer
18.015
water
199
nat
water
Cathepsin O, Cathepsin X, Cathepsin O2
no
no
APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRG
IDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNL
NHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM
APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRG
IDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNL
NHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
CTSK, CTSO, CTSO2
9606
Homo sapiens
10029
Cricetulus griseus
ovary cell line
2.36
47.79
VAPOR DIFFUSION, HANGING DROP
8.4
Cocrystallization. Protein solution: 20 mM NaAcetate pH 4.0, 0.2 M NaCl. Crystallization condition: 32% PEG 4K, 0.1 M Tris pH 8.4, 0.2 M LiSO4, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_conn
struct_site
repository
Initial release
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2010-10-06
1
1
2011-07-13
1
2
2024-04-03
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Structures with similar ligands, differing only in the P3 subsittuent
RCSB
Y
RCSB
2010-07-21
REL
REL
SO4
SULFATE ION
O75
N-benzyl-3-(2-cyano-6-propylpyrimidin-4-yl)-N-[2-(dimethylamino)ethyl]-5-(trifluoromethyl)benzamide
HOH
water
In house cathepsin K structure
other
SO4
1
2
SO4
SO4
216
A
SO4
2
2
SO4
SO4
217
A
O75
1
3
O75
O75
218
A
HOH
2
4
HOH
HOH
219
A
HOH
3
4
HOH
HOH
220
A
HOH
4
4
HOH
HOH
221
A
HOH
5
4
HOH
HOH
222
A
HOH
6
4
HOH
HOH
223
A
HOH
7
4
HOH
HOH
224
A
HOH
8
4
HOH
HOH
225
A
HOH
9
4
HOH
HOH
226
A
HOH
10
4
HOH
HOH
227
A
HOH
11
4
HOH
HOH
228
A
HOH
12
4
HOH
HOH
229
A
HOH
13
4
HOH
HOH
230
A
HOH
14
4
HOH
HOH
231
A
HOH
15
4
HOH
HOH
232
A
HOH
16
4
HOH
HOH
233
A
HOH
17
4
HOH
HOH
234
A
HOH
18
4
HOH
HOH
235
A
HOH
19
4
HOH
HOH
236
A
HOH
20
4
HOH
HOH
237
A
HOH
21
4
HOH
HOH
238
A
HOH
22
4
HOH
HOH
239
A
HOH
23
4
HOH
HOH
240
A
HOH
24
4
HOH
HOH
241
A
HOH
25
4
HOH
HOH
242
A
HOH
26
4
HOH
HOH
243
A
HOH
27
4
HOH
HOH
244
A
HOH
28
4
HOH
HOH
245
A
HOH
29
4
HOH
HOH
246
A
HOH
30
4
HOH
HOH
247
A
HOH
31
4
HOH
HOH
248
A
HOH
32
4
HOH
HOH
249
A
HOH
34
4
HOH
HOH
250
A
HOH
35
4
HOH
HOH
251
A
HOH
36
4
HOH
HOH
252
A
HOH
37
4
HOH
HOH
253
A
HOH
38
4
HOH
HOH
254
A
HOH
39
4
HOH
HOH
255
A
HOH
40
4
HOH
HOH
256
A
HOH
41
4
HOH
HOH
257
A
HOH
42
4
HOH
HOH
258
A
HOH
43
4
HOH
HOH
259
A
HOH
44
4
HOH
HOH
260
A
HOH
45
4
HOH
HOH
261
A
HOH
46
4
HOH
HOH
262
A
HOH
47
4
HOH
HOH
263
A
HOH
48
4
HOH
HOH
264
A
HOH
49
4
HOH
HOH
265
A
HOH
50
4
HOH
HOH
266
A
HOH
51
4
HOH
HOH
267
A
HOH
52
4
HOH
HOH
268
A
HOH
53
4
HOH
HOH
269
A
HOH
54
4
HOH
HOH
270
A
HOH
55
4
HOH
HOH
271
A
HOH
56
4
HOH
HOH
272
A
HOH
57
4
HOH
HOH
273
A
HOH
58
4
HOH
HOH
274
A
HOH
59
4
HOH
HOH
275
A
HOH
60
4
HOH
HOH
276
A
HOH
61
4
HOH
HOH
277
A
HOH
62
4
HOH
HOH
278
A
HOH
64
4
HOH
HOH
279
A
HOH
65
4
HOH
HOH
280
A
HOH
66
4
HOH
HOH
281
A
HOH
67
4
HOH
HOH
282
A
HOH
68
4
HOH
HOH
283
A
HOH
69
4
HOH
HOH
284
A
HOH
70
4
HOH
HOH
285
A
HOH
71
4
HOH
HOH
286
A
HOH
72
4
HOH
HOH
287
A
HOH
73
4
HOH
HOH
288
A
HOH
74
4
HOH
HOH
289
A
HOH
75
4
HOH
HOH
290
A
HOH
76
4
HOH
HOH
291
A
HOH
77
4
HOH
HOH
292
A
HOH
78
4
HOH
HOH
293
A
HOH
79
4
HOH
HOH
294
A
HOH
80
4
HOH
HOH
295
A
HOH
81
4
HOH
HOH
296
A
HOH
82
4
HOH
HOH
297
A
HOH
83
4
HOH
HOH
298
A
HOH
84
4
HOH
HOH
299
A
HOH
85
4
HOH
HOH
300
A
HOH
86
4
HOH
HOH
301
A
HOH
87
4
HOH
HOH
302
A
HOH
89
4
HOH
HOH
303
A
HOH
90
4
HOH
HOH
304
A
HOH
91
4
HOH
HOH
305
A
HOH
92
4
HOH
HOH
306
A
HOH
93
4
HOH
HOH
307
A
HOH
94
4
HOH
HOH
308
A
HOH
95
4
HOH
HOH
309
A
HOH
96
4
HOH
HOH
310
A
HOH
97
4
HOH
HOH
311
A
HOH
98
4
HOH
HOH
312
A
HOH
99
4
HOH
HOH
313
A
HOH
100
4
HOH
HOH
314
A
HOH
101
4
HOH
HOH
315
A
HOH
102
4
HOH
HOH
316
A
HOH
103
4
HOH
HOH
317
A
HOH
104
4
HOH
HOH
318
A
HOH
105
4
HOH
HOH
319
A
HOH
106
4
HOH
HOH
320
A
HOH
107
4
HOH
HOH
321
A
HOH
108
4
HOH
HOH
322
A
HOH
109
4
HOH
HOH
323
A
HOH
110
4
HOH
HOH
324
A
HOH
111
4
HOH
HOH
325
A
HOH
112
4
HOH
HOH
326
A
HOH
113
4
HOH
HOH
327
A
HOH
114
4
HOH
HOH
328
A
HOH
115
4
HOH
HOH
329
A
HOH
116
4
HOH
HOH
330
A
HOH
117
4
HOH
HOH
331
A
HOH
118
4
HOH
HOH
332
A
HOH
119
4
HOH
HOH
333
A
HOH
120
4
HOH
HOH
334
A
HOH
121
4
HOH
HOH
335
A
HOH
122
4
HOH
HOH
336
A
HOH
123
4
HOH
HOH
337
A
HOH
124
4
HOH
HOH
338
A
HOH
125
4
HOH
HOH
339
A
HOH
126
4
HOH
HOH
340
A
HOH
127
4
HOH
HOH
341
A
HOH
128
4
HOH
HOH
342
A
HOH
129
4
HOH
HOH
343
A
HOH
130
4
HOH
HOH
344
A
HOH
131
4
HOH
HOH
345
A
HOH
132
4
HOH
HOH
346
A
HOH
133
4
HOH
HOH
347
A
HOH
134
4
HOH
HOH
348
A
HOH
135
4
HOH
HOH
349
A
HOH
136
4
HOH
HOH
350
A
HOH
137
4
HOH
HOH
351
A
HOH
138
4
HOH
HOH
352
A
HOH
139
4
HOH
HOH
353
A
HOH
140
4
HOH
HOH
354
A
HOH
141
4
HOH
HOH
355
A
HOH
142
4
HOH
HOH
356
A
HOH
143
4
HOH
HOH
357
A
HOH
144
4
HOH
HOH
358
A
HOH
145
4
HOH
HOH
359
A
HOH
146
4
HOH
HOH
360
A
HOH
147
4
HOH
HOH
361
A
HOH
148
4
HOH
HOH
362
A
HOH
149
4
HOH
HOH
363
A
HOH
150
4
HOH
HOH
364
A
HOH
151
4
HOH
HOH
365
A
HOH
152
4
HOH
HOH
366
A
HOH
153
4
HOH
HOH
367
A
HOH
154
4
HOH
HOH
368
A
HOH
155
4
HOH
HOH
369
A
HOH
156
4
HOH
HOH
370
A
HOH
157
4
HOH
HOH
371
A
HOH
158
4
HOH
HOH
372
A
HOH
159
4
HOH
HOH
373
A
HOH
160
4
HOH
HOH
374
A
HOH
161
4
HOH
HOH
375
A
HOH
162
4
HOH
HOH
376
A
HOH
163
4
HOH
HOH
377
A
HOH
164
4
HOH
HOH
378
A
HOH
165
4
HOH
HOH
379
A
HOH
166
4
HOH
HOH
380
A
HOH
167
4
HOH
HOH
381
A
HOH
168
4
HOH
HOH
382
A
HOH
169
4
HOH
HOH
383
A
HOH
170
4
HOH
HOH
384
A
HOH
171
4
HOH
HOH
385
A
HOH
172
4
HOH
HOH
386
A
HOH
173
4
HOH
HOH
387
A
HOH
174
4
HOH
HOH
388
A
HOH
175
4
HOH
HOH
389
A
HOH
176
4
HOH
HOH
390
A
HOH
177
4
HOH
HOH
391
A
HOH
178
4
HOH
HOH
392
A
HOH
179
4
HOH
HOH
393
A
HOH
180
4
HOH
HOH
394
A
HOH
181
4
HOH
HOH
395
A
HOH
182
4
HOH
HOH
396
A
HOH
183
4
HOH
HOH
397
A
HOH
184
4
HOH
HOH
398
A
HOH
185
4
HOH
HOH
399
A
HOH
186
4
HOH
HOH
400
A
HOH
187
4
HOH
HOH
401
A
HOH
188
4
HOH
HOH
402
A
HOH
189
4
HOH
HOH
403
A
HOH
190
4
HOH
HOH
404
A
HOH
191
4
HOH
HOH
405
A
HOH
192
4
HOH
HOH
406
A
HOH
193
4
HOH
HOH
407
A
HOH
194
4
HOH
HOH
408
A
HOH
195
4
HOH
HOH
409
A
HOH
196
4
HOH
HOH
410
A
HOH
197
4
HOH
HOH
411
A
HOH
198
4
HOH
HOH
412
A
HOH
199
4
HOH
HOH
413
A
HOH
200
4
HOH
HOH
414
A
HOH
201
4
HOH
HOH
415
A
HOH
202
4
HOH
HOH
416
A
HOH
205
4
HOH
HOH
417
A
ALA
1
n
1
ALA
1
A
PRO
2
n
2
PRO
2
A
ASP
3
n
3
ASP
3
A
SER
4
n
4
SER
4
A
VAL
5
n
5
VAL
5
A
ASP
6
n
6
ASP
6
A
TYR
7
n
7
TYR
7
A
ARG
8
n
8
ARG
8
A
LYS
9
n
9
LYS
9
A
LYS
10
n
10
LYS
10
A
GLY
11
n
11
GLY
11
A
TYR
12
n
12
TYR
12
A
VAL
13
n
13
VAL
13
A
THR
14
n
14
THR
14
A
PRO
15
n
15
PRO
15
A
VAL
16
n
16
VAL
16
A
LYS
17
n
17
LYS
17
A
ASN
18
n
18
ASN
18
A
GLN
19
n
19
GLN
19
A
GLY
20
n
20
GLY
20
A
GLN
21
n
21
GLN
21
A
CYS
22
n
22
CYS
22
A
GLY
23
n
23
GLY
23
A
SER
24
n
24
SER
24
A
CYS
25
n
25
CYS
25
A
TRP
26
n
26
TRP
26
A
ALA
27
n
27
ALA
27
A
PHE
28
n
28
PHE
28
A
SER
29
n
29
SER
29
A
SER
30
n
30
SER
30
A
VAL
31
n
31
VAL
31
A
GLY
32
n
32
GLY
32
A
ALA
33
n
33
ALA
33
A
LEU
34
n
34
LEU
34
A
GLU
35
n
35
GLU
35
A
GLY
36
n
36
GLY
36
A
GLN
37
n
37
GLN
37
A
LEU
38
n
38
LEU
38
A
LYS
39
n
39
LYS
39
A
LYS
40
n
40
LYS
40
A
LYS
41
n
41
LYS
41
A
THR
42
n
42
THR
42
A
GLY
43
n
43
GLY
43
A
LYS
44
n
44
LYS
44
A
LEU
45
n
45
LEU
45
A
LEU
46
n
46
LEU
46
A
ASN
47
n
47
ASN
47
A
LEU
48
n
48
LEU
48
A
SER
49
n
49
SER
49
A
PRO
50
n
50
PRO
50
A
GLN
51
n
51
GLN
51
A
ASN
52
n
52
ASN
52
A
LEU
53
n
53
LEU
53
A
VAL
54
n
54
VAL
54
A
ASP
55
n
55
ASP
55
A
CYS
56
n
56
CYS
56
A
VAL
57
n
57
VAL
57
A
SER
58
n
58
SER
58
A
GLU
59
n
59
GLU
59
A
ASN
60
n
60
ASN
60
A
ASP
61
n
61
ASP
61
A
GLY
62
n
62
GLY
62
A
CYS
63
n
63
CYS
63
A
GLY
64
n
64
GLY
64
A
GLY
65
n
65
GLY
65
A
GLY
66
n
66
GLY
66
A
TYR
67
n
67
TYR
67
A
MET
68
n
68
MET
68
A
THR
69
n
69
THR
69
A
ASN
70
n
70
ASN
70
A
ALA
71
n
71
ALA
71
A
PHE
72
n
72
PHE
72
A
GLN
73
n
73
GLN
73
A
TYR
74
n
74
TYR
74
A
VAL
75
n
75
VAL
75
A
GLN
76
n
76
GLN
76
A
LYS
77
n
77
LYS
77
A
ASN
78
n
78
ASN
78
A
ARG
79
n
79
ARG
79
A
GLY
80
n
80
GLY
80
A
ILE
81
n
81
ILE
81
A
ASP
82
n
82
ASP
82
A
SER
83
n
83
SER
83
A
GLU
84
n
84
GLU
84
A
ASP
85
n
85
ASP
85
A
ALA
86
n
86
ALA
86
A
TYR
87
n
87
TYR
87
A
PRO
88
n
88
PRO
88
A
TYR
89
n
89
TYR
89
A
VAL
90
n
90
VAL
90
A
GLY
91
n
91
GLY
91
A
GLN
92
n
92
GLN
92
A
GLU
93
n
93
GLU
93
A
GLU
94
n
94
GLU
94
A
SER
95
n
95
SER
95
A
CYS
96
n
96
CYS
96
A
MET
97
n
97
MET
97
A
TYR
98
n
98
TYR
98
A
ASN
99
n
99
ASN
99
A
PRO
100
n
100
PRO
100
A
THR
101
n
101
THR
101
A
GLY
102
n
102
GLY
102
A
LYS
103
n
103
LYS
103
A
ALA
104
n
104
ALA
104
A
ALA
105
n
105
ALA
105
A
LYS
106
n
106
LYS
106
A
CYS
107
n
107
CYS
107
A
ARG
108
n
108
ARG
108
A
GLY
109
n
109
GLY
109
A
TYR
110
n
110
TYR
110
A
ARG
111
n
111
ARG
111
A
GLU
112
n
112
GLU
112
A
ILE
113
n
113
ILE
113
A
PRO
114
n
114
PRO
114
A
GLU
115
n
115
GLU
115
A
GLY
116
n
116
GLY
116
A
ASN
117
n
117
ASN
117
A
GLU
118
n
118
GLU
118
A
LYS
119
n
119
LYS
119
A
ALA
120
n
120
ALA
120
A
LEU
121
n
121
LEU
121
A
LYS
122
n
122
LYS
122
A
ARG
123
n
123
ARG
123
A
ALA
124
n
124
ALA
124
A
VAL
125
n
125
VAL
125
A
ALA
126
n
126
ALA
126
A
ARG
127
n
127
ARG
127
A
VAL
128
n
128
VAL
128
A
GLY
129
n
129
GLY
129
A
PRO
130
n
130
PRO
130
A
VAL
131
n
131
VAL
131
A
SER
132
n
132
SER
132
A
VAL
133
n
133
VAL
133
A
ALA
134
n
134
ALA
134
A
ILE
135
n
135
ILE
135
A
ASP
136
n
136
ASP
136
A
ALA
137
n
137
ALA
137
A
SER
138
n
138
SER
138
A
LEU
139
n
139
LEU
139
A
THR
140
n
140
THR
140
A
SER
141
n
141
SER
141
A
PHE
142
n
142
PHE
142
A
GLN
143
n
143
GLN
143
A
PHE
144
n
144
PHE
144
A
TYR
145
n
145
TYR
145
A
SER
146
n
146
SER
146
A
LYS
147
n
147
LYS
147
A
GLY
148
n
148
GLY
148
A
VAL
149
n
149
VAL
149
A
TYR
150
n
150
TYR
150
A
TYR
151
n
151
TYR
151
A
ASP
152
n
152
ASP
152
A
GLU
153
n
153
GLU
153
A
SER
154
n
154
SER
154
A
CYS
155
n
155
CYS
155
A
ASN
156
n
156
ASN
156
A
SER
157
n
157
SER
157
A
ASP
158
n
158
ASP
158
A
ASN
159
n
159
ASN
159
A
LEU
160
n
160
LEU
160
A
ASN
161
n
161
ASN
161
A
HIS
162
n
162
HIS
162
A
ALA
163
n
163
ALA
163
A
VAL
164
n
164
VAL
164
A
LEU
165
n
165
LEU
165
A
ALA
166
n
166
ALA
166
A
VAL
167
n
167
VAL
167
A
GLY
168
n
168
GLY
168
A
TYR
169
n
169
TYR
169
A
GLY
170
n
170
GLY
170
A
ILE
171
n
171
ILE
171
A
GLN
172
n
172
GLN
172
A
LYS
173
n
173
LYS
173
A
GLY
174
n
174
GLY
174
A
ASN
175
n
175
ASN
175
A
LYS
176
n
176
LYS
176
A
HIS
177
n
177
HIS
177
A
TRP
178
n
178
TRP
178
A
ILE
179
n
179
ILE
179
A
ILE
180
n
180
ILE
180
A
LYS
181
n
181
LYS
181
A
ASN
182
n
182
ASN
182
A
SER
183
n
183
SER
183
A
TRP
184
n
184
TRP
184
A
GLY
185
n
185
GLY
185
A
GLU
186
n
186
GLU
186
A
ASN
187
n
187
ASN
187
A
TRP
188
n
188
TRP
188
A
GLY
189
n
189
GLY
189
A
ASN
190
n
190
ASN
190
A
LYS
191
n
191
LYS
191
A
GLY
192
n
192
GLY
192
A
TYR
193
n
193
TYR
193
A
ILE
194
n
194
ILE
194
A
LEU
195
n
195
LEU
195
A
MET
196
n
196
MET
196
A
ALA
197
n
197
ALA
197
A
ARG
198
n
198
ARG
198
A
ASN
199
n
199
ASN
199
A
LYS
200
n
200
LYS
200
A
ASN
201
n
201
ASN
201
A
ASN
202
n
202
ASN
202
A
ALA
203
n
203
ALA
203
A
CYS
204
n
204
CYS
204
A
GLY
205
n
205
GLY
205
A
ILE
206
n
206
ILE
206
A
ALA
207
n
207
ALA
207
A
ASN
208
n
208
ASN
208
A
LEU
209
n
209
LEU
209
A
ALA
210
n
210
ALA
210
A
SER
211
n
211
SER
211
A
PHE
212
n
212
PHE
212
A
PRO
213
n
213
PRO
213
A
LYS
214
n
214
LYS
214
A
MET
215
n
215
MET
215
A
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
5
A
N
VAL
5
A
O
TYR
169
A
O
TYR
169
A
O
ALA
166
A
O
ALA
166
A
N
VAL
131
A
N
VAL
131
A
N
VAL
5
A
N
VAL
5
A
O
TYR
169
A
O
TYR
169
A
N
LEU
165
A
N
LEU
165
A
O
LYS
181
A
O
LYS
181
A
N
ILE
180
A
N
ILE
180
A
O
ILE
194
A
O
ILE
194
A
O
LEU
195
A
O
LEU
195
A
N
TYR
150
A
N
TYR
150
A
N
ILE
81
A
N
ILE
81
A
O
ALA
104
A
O
ALA
104
A
N
GLY
109
A
N
GLY
109
A
O
LYS
214
A
O
LYS
214
1
A
ASN
159
-114.84
78.77
1
A
LYS
200
-112.64
58.97
1
A
LEU
209
-150.33
59.31
12.953
0.01
0.00
0.00
0.01
0.00
-0.02
0.959
0.953
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.19849
0.16840
0.16995
1.65
42.00
1381
25977
5.0
100.00
3.451
0.054
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.136
0.091
0.80
0.80
1.40
In house cathepsin K structure
MAXIMUM LIKELIHOOD
MASK
1.65
42.00
199
1894
46
0
1649
0.010
0.022
1804
0.003
0.020
1253
1.283
1.975
2448
0.849
3.005
3046
5.269
5.000
234
33.402
24.699
83
12.415
15.000
308
16.977
15.000
10
0.081
0.200
243
0.005
0.020
2055
0.002
0.020
369
0.200
0.200
347
0.184
0.200
1285
0.179
0.200
888
0.085
0.200
902
0.128
0.200
118
0.141
0.200
14
0.291
0.200
35
0.162
0.200
15
1.263
1.500
1427
0.372
1.500
458
1.434
2.000
1742
2.475
3.000
882
3.160
4.500
696
2.207
3.000
3883
4.712
3.000
199
2.033
3.000
3007
0.282
0.193
1.693
80
1593
20
100.00
1.65
42
3O1G
25977
25977
1
100.00
data collection
CrystalClear
phasing
MOLREP
refinement
REFMAC
5.2.0019
data reduction
CrystalClear
data scaling
SCALA
Cathepsin K covalently bound to a 2-cyano pyrimidine inhibitor with a benzyl P3 group.
1
N
N
2
N
N
2
N
N
3
N
N
4
N
N
A
ARG
8
A
ARG
8
HELX_P
A
GLY
11
A
GLY
11
5
1
4
A
SER
24
A
SER
24
HELX_P
A
GLY
43
A
GLY
43
1
2
20
A
SER
49
A
SER
49
HELX_P
A
VAL
57
A
VAL
57
1
3
9
A
ASP
61
A
ASP
61
HELX_P
A
GLY
65
A
GLY
65
5
4
5
A
TYR
67
A
TYR
67
HELX_P
A
ASN
78
A
ASN
78
1
5
12
A
ASN
117
A
ASN
117
HELX_P
A
GLY
129
A
GLY
129
1
6
13
A
LEU
139
A
LEU
139
HELX_P
A
PHE
144
A
PHE
144
1
7
6
A
ASN
202
A
ASN
202
HELX_P
A
ILE
206
A
ILE
206
5
8
5
disulf
2.044
A
CYS
22
A
SG
CYS
22
1_555
A
CYS
63
A
SG
CYS
63
1_555
disulf
2.031
A
CYS
56
A
SG
CYS
56
1_555
A
CYS
96
A
SG
CYS
96
1_555
disulf
2.047
A
CYS
155
A
SG
CYS
155
1_555
A
CYS
204
A
SG
CYS
204
1_555
covale
1.753
none
A
CYS
25
A
SG
CYS
25
1_555
A
O75
218
D
C7
O75
1_555
HYDROLASE
hydrolase, reversible covalent inhibitor, ligand covalently bound to Cys25, bone, K protein from comp
CATK_HUMAN
UNP
1
115
P43235
APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRG
IDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNL
NHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM
115
329
3O1G
1
215
P43235
A
1
1
215
3
5
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
VAL
5
A
VAL
5
A
ASP
6
A
ASP
6
A
HIS
162
A
HIS
162
A
GLN
172
A
GLN
172
A
VAL
131
A
VAL
131
A
ILE
135
A
ILE
135
A
VAL
5
A
VAL
5
A
ASP
6
A
ASP
6
A
HIS
162
A
HIS
162
A
GLN
172
A
GLN
172
A
ASN
175
A
ASN
175
A
LYS
181
A
LYS
181
A
TYR
193
A
TYR
193
A
ALA
197
A
ALA
197
A
VAL
149
A
VAL
149
A
TYR
150
A
TYR
150
A
ILE
81
A
ILE
81
A
ASP
82
A
ASP
82
A
LYS
103
A
LYS
103
A
ALA
105
A
ALA
105
A
GLY
109
A
GLY
109
A
GLU
112
A
GLU
112
A
SER
211
A
SER
211
A
LYS
214
A
LYS
214
BINDING SITE FOR RESIDUE SO4 A 216
A
SO4
216
Software
6
BINDING SITE FOR RESIDUE SO4 A 217
A
SO4
217
Software
3
BINDING SITE FOR RESIDUE O75 A 218
A
O75
218
Software
21
A
ASN
18
A
ASN
18
6
1_555
A
GLY
185
A
GLY
185
6
1_555
A
GLU
186
A
GLU
186
6
1_555
A
ASN
187
A
ASN
187
6
1_555
A
HOH
302
E
HOH
6
1_555
A
HOH
364
E
HOH
6
1_555
A
ARG
111
A
ARG
111
3
1_555
A
LYS
214
A
LYS
214
3
1_555
A
HOH
265
E
HOH
3
1_555
A
GLN
19
A
GLN
19
21
1_555
A
GLY
23
A
GLY
23
21
1_555
A
SER
24
A
SER
24
21
1_555
A
CYS
25
A
CYS
25
21
1_555
A
THR
42
A
THR
42
21
4_555
A
GLU
59
A
GLU
59
21
1_555
A
ASN
60
A
ASN
60
21
1_555
A
ASP
61
A
ASP
61
21
1_555
A
CYS
63
A
CYS
63
21
1_555
A
GLY
64
A
GLY
64
21
1_555
A
GLY
65
A
GLY
65
21
1_555
A
GLY
66
A
GLY
66
21
1_555
A
TYR
67
A
TYR
67
21
1_555
A
ALA
134
A
ALA
134
21
1_555
A
LEU
160
A
LEU
160
21
1_555
A
ASN
161
A
ASN
161
21
1_555
A
HIS
162
A
HIS
162
21
1_555
A
ALA
163
A
ALA
163
21
1_555
A
LEU
209
A
LEU
209
21
1_555
A
HOH
268
E
HOH
21
1_555
A
HOH
307
E
HOH
21
1_555
96
P 43 21 2