0.025106 0.000000 0.000000 0.000000 0.025106 0.000000 0.000000 0.000000 0.011825 0.00000 0.00000 0.00000 Chenoweth, D.M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 16 90.00 90.00 90.00 39.831 39.831 84.567 C54 H62 N22 O10 1179.211 (23R,52R)-23,52-diamino-5,11,17,28,34,40,46,57-octamethyl-2,5,8,11,14,17,20,25,28,31,34,37,40,43,46,49,54,57,60,64-icosaazanonacyclo[54.2.1.1~4,7~.1~10,13~.1~16,19~.1~27,30~.1~33,36~.1~39,42~.1~45,48~]hexahexaconta-1(58),4(66),6,10(65),12,16(64),18,27(63),29,33(62),35,39(61),41,45(60),47,56(59)-hexadecaene-3,9,15,21,26,32,38,44,50,55-decone non-polymer C9 H13 I N3 O7 P 433.094 n 5-IODO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE DNA linking Ca 2 40.078 CALCIUM ION non-polymer C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking H2 O 18.015 WATER non-polymer N 1 N C N 2 N N N 3 N O Y 4 N C Y 5 N N N 6 N O Y 7 N C N 8 N N N 9 N O Y 10 N C Y 11 N N N 12 N O N 13 N C N 14 N N N 15 N O Y 16 N C Y 17 N N N 18 N O N 19 N C N 20 N O Y 21 N C N 22 N N N 23 N O Y 24 N C Y 25 N N N 26 N O N 27 N C Y 28 N N N 29 N O Y 30 N C N 31 N N Y 32 N C N 33 N N N 34 N C N 35 N N Y 36 N C Y 37 N N Y 38 N C N 39 N N N 40 N C Y 41 N N Y 42 N C N 43 N N N 44 N C Y 45 N N Y 46 N C Y 47 N C N 48 N N Y 49 N C Y 50 N N N 51 N C Y 52 N N N 53 N C N 54 N N N 55 N C N 56 N N N 57 R C N 58 N C N 59 N C Y 60 N C Y 61 N C Y 62 N C N 63 N C Y 64 N C N 65 N C Y 66 N C Y 67 N C Y 68 N C N 69 N C Y 70 N C N 71 N C Y 72 N C Y 73 N C N 74 N C Y 75 N C N 76 N C Y 77 N C Y 78 N C Y 79 N C N 80 N C N 81 N C N 82 N C N 83 R C N 84 N C Y 85 N C Y 86 N C N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N O N 150 N P N 151 N O N 152 N O N 153 N O N 154 N C N 155 R C N 156 N O N 157 S C N 158 N O N 159 N C N 160 R C N 161 N N N 162 N C N 163 N O N 164 N N N 165 N C N 166 N N N 167 N C N 168 N C N 169 N I N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N CA N 184 N O N 185 N P N 186 N O N 187 N O N 188 N O N 189 N C N 190 R C N 191 N O N 192 S C N 193 N O N 194 N C N 195 R C Y 196 N N Y 197 N C Y 198 N N Y 199 N C Y 200 N C N 201 N N Y 202 N N Y 203 N C Y 204 N N Y 205 N C N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N O N 221 N P N 222 N O N 223 N O N 224 N O N 225 N C N 226 R C N 227 N O N 228 S C N 229 N O N 230 N C N 231 R C N 232 N N N 233 N C N 234 N O N 235 N N N 236 N C N 237 N N N 238 N C N 239 N C N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N O N 255 N P N 256 N O N 257 N O N 258 N O N 259 N C N 260 R C N 261 N O N 262 S C N 263 N O N 264 N C N 265 R C Y 266 N N Y 267 N C Y 268 N N Y 269 N C N 270 N C N 271 N O N 272 N N N 273 N C N 274 N N N 275 N N Y 276 N C N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N O N 292 N P N 293 N O N 294 N O N 295 N O N 296 N C N 297 R C N 298 N O N 299 S C N 300 N O N 301 N C N 302 R C N 303 N N N 304 N C N 305 N O N 306 N N N 307 N C N 308 N O N 309 N C N 310 N C N 311 N C N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N O N 328 N H N 329 N H N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing Y 6 N doub N 7 N sing Y 8 N sing N 9 N sing Y 10 N sing Y 11 N sing N 12 N doub Y 13 N doub N 14 N sing N 15 N sing N 16 N sing N 17 N doub N 18 N sing N 19 N sing Y 20 N sing Y 21 N sing N 22 N doub N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N doub Y 30 N sing Y 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N doub Y 36 N doub Y 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N doub N 42 N sing Y 43 N sing Y 44 N sing N 45 N sing N 46 N doub N 47 N sing N 48 N sing N 49 N sing Y 50 N sing Y 51 N doub N 52 N doub Y 53 N doub N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing Y 65 N sing Y 66 N doub Y 67 N sing Y 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing Y 77 N sing Y 78 N sing N 79 N sing Y 80 N doub N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing Y 86 N sing Y 87 N sing Y 88 N doub N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing Y 94 N sing Y 95 N sing N 96 N sing N 97 N sing N 98 N sing Y 99 N doub Y 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub Y 119 N doub N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing Y 126 N sing Y 127 N doub N 128 N sing Y 129 N doub N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing Y 135 N doub Y 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing Y 141 N doub N 142 N sing Y 143 N doub N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N doub N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N doub N 183 N sing N 184 N doub N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N doub N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N doub N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing Y 215 N sing Y 216 N sing Y 217 N doub N 218 N sing Y 219 N sing Y 220 N sing Y 221 N doub N 222 N sing Y 223 N doub N 224 N sing N 225 N sing Y 226 N sing Y 227 N doub N 228 N sing Y 229 N sing N 230 N sing N 231 N sing N 232 N doub N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N doub N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N doub N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N doub N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing Y 288 N sing Y 289 N sing Y 290 N doub N 291 N sing Y 292 N sing N 293 N sing Y 294 N doub N 295 N doub N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N doub N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N doub N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N doub N 330 N sing N 331 N sing N 332 N sing N 333 N doub N 334 N sing N 335 N sing N 336 N doub N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing US J.Am.Chem.Soc. JACSAT 0004 0002-7863 132 14521 14529 10.1021/ja105068b 20812704 Structural basis for cyclic py-im polyamide allosteric inhibition of nuclear receptor binding. 2010 10.2210/pdb3omj/pdb pdb_00003omj 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2008-08-07 MARMOSAIC 325 mm CCD SINGLE WAVELENGTH M x-ray 1 0.82654 1.0 BL12-2 SSRL 0.82654 SYNCHROTRON SSRL BEAMLINE BL12-2 3170.902 5'-D(*CP*(C38)P*AP*GP*TP*AP*CP*TP*GP*G)-3' 2 syn polymer 40.078 CALCIUM ION 4 syn non-polymer 1179.211 (23R,52R)-23,52-diamino-5,11,17,28,34,40,46,57-octamethyl-2,5,8,11,14,17,20,25,28,31,34,37,40,43,46,49,54,57,60,64-icosaazanonacyclo[54.2.1.1~4,7~.1~10,13~.1~16,19~.1~27,30~.1~33,36~.1~39,42~.1~45,48~]hexahexaconta-1(58),4(66),6,10(65),12,16(64),18,27(63),29,33(62),35,39(61),41,45(60),47,56(59)-hexadecaene-3,9,15,21,26,32,38,44,50,55-decone 1 syn non-polymer 18.015 water 237 nat water no yes (DC)(C38)(DA)(DG)(DT)(DA)(DC)(DT)(DG)(DG) CCAGTACTGG A,B polydeoxyribonucleotide n n n n n n n n n n 1 2.24 51 VAPOR DIFFUSION, SITTING DROP 7.5 23% MPD, 35mM calcium acetate, 10mM Tris, pH 7.5, equilibrated against 35% MPD, VAPOR DIFFUSION, SITTING DROP, temperature 277K 277 -10.588 1 19 A 1 B 10 0.678 A_DC1:DG10_B 1 -16.868 0.148 0.274 -0.140 -7.076 1 19 A 2 B 9 1.706 A_C382:DG9_B 2 -6.312 0.186 -0.016 -0.097 6.150 1 20 A 3 B 8 3.835 A_DA3:DT8_B 3 -10.920 0.128 -0.097 -0.106 -2.231 1 19 A 4 B 7 -0.784 A_DG4:DC7_B 4 -4.045 -0.119 0.089 -0.073 0.367 1 20 A 5 B 6 -4.867 A_DT5:DA6_B 5 -14.693 -0.130 -0.025 -0.098 1.174 1 20 A 6 B 5 -4.883 A_DA6:DT5_B 6 -16.258 0.132 0.038 -0.094 2.390 1 19 A 7 B 4 -1.098 A_DC7:DG4_B 7 -4.657 0.120 0.092 -0.099 -2.932 1 20 A 8 B 3 3.784 A_DT8:DA3_B 8 -7.957 -0.095 -0.135 -0.128 16.582 1 19 A 9 B 2 0.866 A_DG9:C382_B 9 -5.000 -0.160 0.073 -0.044 22.996 1 19 A 10 B 1 -0.148 A_DG10:DC1_B 10 -17.052 -0.165 0.607 -0.103 3.122 34.991 A A 1 2 12.958 B B 10 9 3.279 7.696 -0.067 -0.122 AA_DC1C382:DG9DG10_BB 1 5.806 -9.775 33.677 -1.361 0.984 3.283 31.465 A A 2 3 16.425 B B 9 8 3.159 8.793 0.447 0.859 AA_C382DA3:DT8DG9_BB 2 0.739 -1.381 30.232 -0.069 -0.685 3.606 37.773 A A 3 4 17.680 B B 8 7 3.386 11.191 -1.721 0.255 AA_DA3DG4:DC7DT8_BB 3 -8.440 13.334 35.164 -1.209 1.450 3.173 32.250 A A 4 5 5.142 B B 7 6 3.202 2.852 -0.737 -0.150 AA_DG4DT5:DA6DC7_BB 4 0.184 -0.332 32.126 -0.765 1.359 3.389 36.623 A A 5 6 11.578 B B 6 5 3.276 7.231 -0.043 0.903 AA_DT5DA6:DT5DA6_BB 5 -0.164 0.263 35.926 0.415 0.046 3.222 32.134 A A 6 7 4.468 B B 5 4 3.237 2.471 0.783 -0.208 AA_DA6DC7:DG4DT5_BB 6 0.403 -0.729 32.039 -0.813 -1.344 3.566 37.649 A A 7 8 16.742 B B 4 3 3.331 10.589 1.752 0.281 AA_DC7DT8:DA3DG4_BB 7 7.944 -12.561 35.324 -1.065 -1.590 3.288 31.155 A A 8 9 18.101 B B 3 2 3.057 9.571 -0.796 1.292 AA_DT8DG9:C382DA3_BB 8 0.636 -1.203 29.677 0.589 1.603 3.083 33.306 A A 9 10 6.285 B B 2 1 3.188 3.579 0.344 0.135 AA_DG9DG10:DC1C382_BB 9 -5.676 9.967 32.641 -0.342 -1.516 chem_comp_atom chem_comp_bond database_2 pdbx_struct_conn_angle pdbx_validate_polymer_linkage struct_conn struct_site repository Initial release Version format compliance Advisory Data collection Database references Derived calculations 1 0 2010-09-08 1 1 2011-07-13 1 2 2024-02-21 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2010-08-27 REL REL CA CALCIUM ION 1P2 (23R,52R)-23,52-diamino-5,11,17,28,34,40,46,57-octamethyl-2,5,8,11,14,17,20,25,28,31,34,37,40,43,46,49,54,57,60,64-icosaazanonacyclo[54.2.1.1~4,7~.1~10,13~.1~16,19~.1~27,30~.1~33,36~.1~39,42~.1~45,48~]hexahexaconta-1(58),4(66),6,10(65),12,16(64),18,27(63),29,33(62),35,39(61),41,45(60),47,56(59)-hexadecaene-3,9,15,21,26,32,38,44,50,55-decone HOH water CA 302 2 CA CA 302 A CA 300 2 CA CA 300 A CA 301 2 CA CA 301 A 1P2 500 3 1P2 1P2 500 B CA 303 2 CA CA 303 B HOH 13 4 HOH HOH 13 A HOH 14 4 HOH HOH 14 A HOH 15 4 HOH HOH 15 A HOH 16 4 HOH HOH 16 A HOH 18 4 HOH HOH 18 A HOH 20 4 HOH HOH 20 A HOH 22 4 HOH HOH 22 A HOH 23 4 HOH HOH 23 A HOH 24 4 HOH HOH 24 A HOH 25 4 HOH HOH 25 A HOH 26 4 HOH HOH 26 A HOH 32 4 HOH HOH 32 A HOH 34 4 HOH HOH 34 A HOH 35 4 HOH HOH 35 A HOH 38 4 HOH HOH 38 A HOH 41 4 HOH HOH 41 A HOH 46 4 HOH HOH 46 A HOH 48 4 HOH HOH 48 A HOH 49 4 HOH HOH 49 A HOH 50 4 HOH HOH 50 A HOH 51 4 HOH HOH 51 A HOH 52 4 HOH HOH 52 A HOH 58 4 HOH HOH 58 A HOH 59 4 HOH HOH 59 A HOH 60 4 HOH HOH 60 A HOH 61 4 HOH HOH 61 A HOH 62 4 HOH HOH 62 A HOH 63 4 HOH HOH 63 A HOH 66 4 HOH HOH 66 A HOH 70 4 HOH HOH 70 A HOH 73 4 HOH HOH 73 A HOH 74 4 HOH HOH 74 A HOH 75 4 HOH HOH 75 A HOH 76 4 HOH HOH 76 A HOH 77 4 HOH HOH 77 A HOH 81 4 HOH HOH 81 A HOH 82 4 HOH HOH 82 A HOH 88 4 HOH HOH 88 A HOH 89 4 HOH HOH 89 A HOH 90 4 HOH HOH 90 A HOH 93 4 HOH HOH 93 A HOH 94 4 HOH HOH 94 A HOH 96 4 HOH HOH 96 A HOH 99 4 HOH HOH 99 A HOH 100 4 HOH HOH 100 A HOH 104 4 HOH HOH 104 A HOH 105 4 HOH HOH 105 A HOH 109 4 HOH HOH 109 A HOH 110 4 HOH HOH 110 A HOH 113 4 HOH HOH 113 A HOH 117 4 HOH HOH 117 A HOH 118 4 HOH HOH 118 A HOH 119 4 HOH HOH 119 A HOH 121 4 HOH HOH 121 A HOH 122 4 HOH HOH 122 A HOH 123 4 HOH HOH 123 A HOH 124 4 HOH HOH 124 A HOH 126 4 HOH HOH 126 A HOH 128 4 HOH HOH 128 A HOH 133 4 HOH HOH 133 A HOH 135 4 HOH HOH 135 A HOH 136 4 HOH HOH 136 A HOH 141 4 HOH HOH 141 A HOH 147 4 HOH HOH 147 A HOH 149 4 HOH HOH 149 A HOH 152 4 HOH HOH 152 A HOH 153 4 HOH HOH 153 A HOH 160 4 HOH HOH 160 A HOH 161 4 HOH HOH 161 A HOH 162 4 HOH HOH 162 A HOH 174 4 HOH HOH 174 A HOH 177 4 HOH HOH 177 A HOH 185 4 HOH HOH 185 A HOH 186 4 HOH HOH 186 A HOH 190 4 HOH HOH 190 A HOH 191 4 HOH HOH 191 A HOH 192 4 HOH HOH 192 A HOH 193 4 HOH HOH 193 A HOH 195 4 HOH HOH 195 A HOH 199 4 HOH HOH 199 A HOH 201 4 HOH HOH 201 A HOH 206 4 HOH HOH 206 A HOH 207 4 HOH HOH 207 A HOH 208 4 HOH HOH 208 A HOH 211 4 HOH HOH 211 A HOH 215 4 HOH HOH 215 A HOH 217 4 HOH HOH 217 A HOH 218 4 HOH HOH 218 A HOH 219 4 HOH HOH 219 A HOH 220 4 HOH HOH 220 A HOH 222 4 HOH HOH 222 A HOH 223 4 HOH HOH 223 A HOH 226 4 HOH HOH 226 A HOH 227 4 HOH HOH 227 A HOH 230 4 HOH HOH 230 A HOH 232 4 HOH HOH 232 A HOH 233 4 HOH HOH 233 A HOH 235 4 HOH HOH 235 A HOH 237 4 HOH HOH 237 A HOH 239 4 HOH HOH 239 A HOH 240 4 HOH HOH 240 A HOH 241 4 HOH HOH 241 A HOH 242 4 HOH HOH 242 A HOH 243 4 HOH HOH 243 A HOH 244 4 HOH HOH 244 A HOH 246 4 HOH HOH 246 A HOH 247 4 HOH HOH 247 A HOH 248 4 HOH HOH 248 A HOH 249 4 HOH HOH 249 A HOH 250 4 HOH HOH 250 A HOH 251 4 HOH HOH 251 A HOH 252 4 HOH HOH 252 A HOH 253 4 HOH HOH 253 A HOH 11 4 HOH HOH 11 B HOH 12 4 HOH HOH 12 B HOH 17 4 HOH HOH 17 B HOH 21 4 HOH HOH 21 B HOH 27 4 HOH HOH 27 B HOH 28 4 HOH HOH 28 B HOH 29 4 HOH HOH 29 B HOH 30 4 HOH HOH 30 B HOH 31 4 HOH HOH 31 B HOH 33 4 HOH HOH 33 B HOH 36 4 HOH HOH 36 B HOH 37 4 HOH HOH 37 B HOH 39 4 HOH HOH 39 B HOH 40 4 HOH HOH 40 B HOH 42 4 HOH HOH 42 B HOH 43 4 HOH HOH 43 B HOH 44 4 HOH HOH 44 B HOH 45 4 HOH HOH 45 B HOH 47 4 HOH HOH 47 B HOH 53 4 HOH HOH 53 B HOH 54 4 HOH HOH 54 B HOH 55 4 HOH HOH 55 B HOH 56 4 HOH HOH 56 B HOH 57 4 HOH HOH 57 B HOH 64 4 HOH HOH 64 B HOH 65 4 HOH HOH 65 B HOH 67 4 HOH HOH 67 B HOH 68 4 HOH HOH 68 B HOH 69 4 HOH HOH 69 B HOH 71 4 HOH HOH 71 B HOH 72 4 HOH HOH 72 B HOH 78 4 HOH HOH 78 B HOH 79 4 HOH HOH 79 B HOH 80 4 HOH HOH 80 B HOH 83 4 HOH HOH 83 B HOH 84 4 HOH HOH 84 B HOH 85 4 HOH HOH 85 B HOH 86 4 HOH HOH 86 B HOH 87 4 HOH HOH 87 B HOH 91 4 HOH HOH 91 B HOH 92 4 HOH HOH 92 B HOH 95 4 HOH HOH 95 B HOH 97 4 HOH HOH 97 B HOH 98 4 HOH HOH 98 B HOH 101 4 HOH HOH 101 B HOH 102 4 HOH HOH 102 B HOH 103 4 HOH HOH 103 B HOH 106 4 HOH HOH 106 B HOH 107 4 HOH HOH 107 B HOH 108 4 HOH HOH 108 B HOH 111 4 HOH HOH 111 B HOH 112 4 HOH HOH 112 B HOH 114 4 HOH HOH 114 B HOH 115 4 HOH HOH 115 B HOH 116 4 HOH HOH 116 B HOH 120 4 HOH HOH 120 B HOH 125 4 HOH HOH 125 B HOH 127 4 HOH HOH 127 B HOH 129 4 HOH HOH 129 B HOH 130 4 HOH HOH 130 B HOH 131 4 HOH HOH 131 B HOH 132 4 HOH HOH 132 B HOH 134 4 HOH HOH 134 B HOH 137 4 HOH HOH 137 B HOH 138 4 HOH HOH 138 B HOH 139 4 HOH HOH 139 B HOH 140 4 HOH HOH 140 B HOH 142 4 HOH HOH 142 B HOH 143 4 HOH HOH 143 B HOH 144 4 HOH HOH 144 B HOH 145 4 HOH HOH 145 B HOH 146 4 HOH HOH 146 B HOH 148 4 HOH HOH 148 B HOH 150 4 HOH HOH 150 B HOH 151 4 HOH HOH 151 B HOH 154 4 HOH HOH 154 B HOH 155 4 HOH HOH 155 B HOH 156 4 HOH HOH 156 B HOH 157 4 HOH HOH 157 B HOH 158 4 HOH HOH 158 B HOH 159 4 HOH HOH 159 B HOH 163 4 HOH HOH 163 B HOH 164 4 HOH HOH 164 B HOH 165 4 HOH HOH 165 B HOH 166 4 HOH HOH 166 B HOH 167 4 HOH HOH 167 B HOH 168 4 HOH HOH 168 B HOH 169 4 HOH HOH 169 B HOH 170 4 HOH HOH 170 B HOH 171 4 HOH HOH 171 B HOH 172 4 HOH HOH 172 B HOH 173 4 HOH HOH 173 B HOH 175 4 HOH HOH 175 B HOH 176 4 HOH HOH 176 B HOH 178 4 HOH HOH 178 B HOH 179 4 HOH HOH 179 B HOH 180 4 HOH HOH 180 B HOH 181 4 HOH HOH 181 B HOH 182 4 HOH HOH 182 B HOH 184 4 HOH HOH 184 B HOH 187 4 HOH HOH 187 B HOH 188 4 HOH HOH 188 B HOH 189 4 HOH HOH 189 B HOH 194 4 HOH HOH 194 B HOH 196 4 HOH HOH 196 B HOH 197 4 HOH HOH 197 B HOH 198 4 HOH HOH 198 B HOH 200 4 HOH HOH 200 B HOH 202 4 HOH HOH 202 B HOH 203 4 HOH HOH 203 B HOH 204 4 HOH HOH 204 B HOH 205 4 HOH HOH 205 B HOH 210 4 HOH HOH 210 B HOH 212 4 HOH HOH 212 B HOH 213 4 HOH HOH 213 B HOH 221 4 HOH HOH 221 B HOH 224 4 HOH HOH 224 B HOH 228 4 HOH HOH 228 B HOH 229 4 HOH HOH 229 B HOH 234 4 HOH HOH 234 B HOH 236 4 HOH HOH 236 B HOH 238 4 HOH HOH 238 B HOH 245 4 HOH HOH 245 B HOH 254 4 HOH HOH 254 B DC 1 n 1 DC 1 A C38 2 n 2 C38 2 A DA 3 n 3 DA 3 A DG 4 n 4 DG 4 A DT 5 n 5 DT 5 A DA 6 n 6 DA 6 A DC 7 n 7 DC 7 A DT 8 n 8 DT 8 A DG 9 n 9 DG 9 A DG 10 n 10 DG 10 A DC 1 n 1 DC 1 B C38 2 n 2 C38 2 B DA 3 n 3 DA 3 B DG 4 n 4 DG 4 B DT 5 n 5 DT 5 B DA 6 n 6 DA 6 B DC 7 n 7 DC 7 B DT 8 n 8 DT 8 B DG 9 n 9 DG 9 B DG 10 n 10 DG 10 B author_and_software_defined_assembly PISA 2 dimeric 2750 -7 3720 A HOH 32 H O HOH 1_555 A CA 300 A D CA CA 1_555 A HOH 34 H O HOH 1_555 91.0 A HOH 32 H O HOH 1_555 A CA 300 A D CA CA 1_555 A HOH 73 A H O HOH 1_555 134.8 A HOH 34 H O HOH 1_555 A CA 300 A D CA CA 1_555 A HOH 73 A H O HOH 1_555 70.9 A HOH 32 H O HOH 1_555 A CA 300 A D CA CA 1_555 A HOH 133 H O HOH 1_555 75.2 A HOH 34 H O HOH 1_555 A CA 300 A D CA CA 1_555 A HOH 133 H O HOH 1_555 118.1 A HOH 73 A H O HOH 1_555 A CA 300 A D CA CA 1_555 A HOH 133 H O HOH 1_555 77.8 A HOH 32 H O HOH 1_555 A CA 300 A D CA CA 1_555 A HOH 161 A H O HOH 1_555 61.1 A HOH 34 H O HOH 1_555 A CA 300 A D CA CA 1_555 A HOH 161 A H O HOH 1_555 142.9 A HOH 73 A H O HOH 1_555 A CA 300 A D CA CA 1_555 A HOH 161 A H O HOH 1_555 146.1 A HOH 133 H O HOH 1_555 A CA 300 A D CA CA 1_555 A HOH 161 A H O HOH 1_555 80.1 A HOH 32 H O HOH 1_555 A CA 301 B E CA CA 1_555 A HOH 34 H O HOH 1_555 98.9 A HOH 32 H O HOH 1_555 A CA 301 B E CA CA 1_555 A HOH 41 H O HOH 1_555 83.3 A HOH 34 H O HOH 1_555 A CA 301 B E CA CA 1_555 A HOH 41 H O HOH 1_555 92.0 A HOH 32 H O HOH 1_555 A CA 301 B E CA CA 1_555 A HOH 133 H O HOH 1_555 84.1 A HOH 34 H O HOH 1_555 A CA 301 B E CA CA 1_555 A HOH 133 H O HOH 1_555 173.2 A HOH 41 H O HOH 1_555 A CA 301 B E CA CA 1_555 A HOH 133 H O HOH 1_555 82.3 A HOH 32 H O HOH 1_555 A CA 301 B E CA CA 1_555 A HOH 161 B H O HOH 1_555 81.6 A HOH 34 H O HOH 1_555 A CA 301 B E CA CA 1_555 A HOH 161 B H O HOH 1_555 84.2 A HOH 41 H O HOH 1_555 A CA 301 B E CA CA 1_555 A HOH 161 B H O HOH 1_555 163.6 A HOH 133 H O HOH 1_555 A CA 301 B E CA CA 1_555 A HOH 161 B H O HOH 1_555 102.3 A HOH 124 H O HOH 1_555 A CA 302 C CA CA 1_555 A HOH 246 H O HOH 1_555 77.7 A HOH 124 H O HOH 1_555 A CA 302 C CA CA 1_555 A HOH 247 H O HOH 1_555 120.7 A HOH 246 H O HOH 1_555 A CA 302 C CA CA 1_555 A HOH 247 H O HOH 1_555 84.0 A HOH 124 H O HOH 1_555 A CA 302 C CA CA 1_555 A HOH 252 H O HOH 1_555 78.4 A HOH 246 H O HOH 1_555 A CA 302 C CA CA 1_555 A HOH 252 H O HOH 1_555 85.0 A HOH 247 H O HOH 1_555 A CA 302 C CA CA 1_555 A HOH 252 H O HOH 1_555 155.1 A HOH 124 H O HOH 1_555 A CA 302 C CA CA 1_555 A HOH 253 H O HOH 1_555 73.3 A HOH 246 H O HOH 1_555 A CA 302 C CA CA 1_555 A HOH 253 H O HOH 1_555 127.5 A HOH 247 H O HOH 1_555 A CA 302 C CA CA 1_555 A HOH 253 H O HOH 1_555 75.0 A HOH 252 H O HOH 1_555 A CA 302 C CA CA 1_555 A HOH 253 H O HOH 1_555 128.8 A HOH 124 H O HOH 1_555 A CA 302 C CA CA 1_555 B HOH 125 I O HOH 1_555 114.1 A HOH 246 H O HOH 1_555 A CA 302 C CA CA 1_555 B HOH 125 I O HOH 1_555 157.4 A HOH 247 H O HOH 1_555 A CA 302 C CA CA 1_555 B HOH 125 I O HOH 1_555 104.0 A HOH 252 H O HOH 1_555 A CA 302 C CA CA 1_555 B HOH 125 I O HOH 1_555 79.0 A HOH 253 H O HOH 1_555 A CA 302 C CA CA 1_555 B HOH 125 I O HOH 1_555 75.1 A HOH 124 H O HOH 1_555 A CA 302 C CA CA 1_555 B HOH 245 I O HOH 1_555 151.2 A HOH 246 H O HOH 1_555 A CA 302 C CA CA 1_555 B HOH 245 I O HOH 1_555 81.6 A HOH 247 H O HOH 1_555 A CA 302 C CA CA 1_555 B HOH 245 I O HOH 1_555 76.1 A HOH 252 H O HOH 1_555 A CA 302 C CA CA 1_555 B HOH 245 I O HOH 1_555 80.2 A HOH 253 H O HOH 1_555 A CA 302 C CA CA 1_555 B HOH 245 I O HOH 1_555 135.5 B HOH 125 I O HOH 1_555 A CA 302 C CA CA 1_555 B HOH 245 I O HOH 1_555 80.0 B C38 2 B O1P C38 2 1_555 B CA 303 G CA CA 1_555 B HOH 45 I O HOH 1_555 85.1 B C38 2 B O1P C38 2 1_555 B CA 303 G CA CA 1_555 B HOH 85 I O HOH 1_555 173.4 B HOH 45 I O HOH 1_555 B CA 303 G CA CA 1_555 B HOH 85 I O HOH 1_555 88.8 A C38 2 A C38 2 DC B C38 2 B C38 2 DC 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 B CA 303 G CA 1 A A O6 O DG HOH 10 240 1.73 1 A A O5' O DC HOH 1 242 1.82 1 A A O O HOH HOH 100 242 1.88 1 A A O O HOH HOH 239 243 2.02 1 A A N7 O DG HOH 10 240 2.07 1 B B OP2 O DG HOH 10 42 2.09 A 1 B B O O HOH HOH 198 234 2.12 1 B B O O HOH HOH 178 224 2.15 1 A A C6 O DG HOH 10 240 2.15 1 A A OP1 O DT HOH 5 152 2.16 A 1 A A O O HOH HOH 239 240 2.18 1 B B O O HOH HOH 114 224 2.19 1 A DC 1 0.088 SIDE CHAIN 1 A DG 4 A 0.081 SIDE CHAIN 1 A DT 5 A 0.083 SIDE CHAIN 1 B DC 1 0.105 SIDE CHAIN 1 B DG 4 0.079 SIDE CHAIN 1 B DT 5 A 0.082 SIDE CHAIN 1 -15.47 1.20 119.70 104.23 A A A C3' O3' P C38 C38 DA 2 2 3 B Y 1 11.95 1.10 110.50 122.45 A A A O3' P OP2 C38 DA DA 2 3 3 B B Y 1 -10.87 1.80 114.10 103.23 A A A C5' C4' C3' DA DA DA 3 3 3 B N 1 9.30 1.20 119.70 129.00 A A A C3' O3' P DA DA DG 3 3 4 B Y 1 -9.99 0.80 109.40 99.41 A A A O5' C5' C4' DG DG DG 4 4 4 B B N 1 15.32 1.20 115.70 131.02 A A A C5' C4' C3' DG DG DG 4 4 4 B N 1 11.72 1.20 119.70 131.42 A A A C3' O3' P DG DG DT 4 4 5 B B Y 1 -4.93 0.80 109.40 104.47 A A A O5' C5' C4' DT DT DT 5 5 5 A A N 1 8.65 1.20 115.70 124.35 A A A C5' C4' C3' DT DT DT 5 5 5 A N 1 8.18 1.20 119.70 127.88 A A A C3' O3' P DC DC DT 7 7 8 B B Y 1 -3.60 0.40 104.50 100.90 B B B O4' C4' C3' DC DC DC 1 1 1 N 1 4.67 0.30 108.30 112.97 B B B O4' C1' N9 DA DA DA 3 3 3 N 1 -18.37 2.50 109.70 91.33 B B B C4' C3' O3' DG DG DG 4 4 4 A N 1 14.29 2.00 112.30 126.59 B B B C4' C3' O3' DG DG DG 4 4 4 B N 1 17.51 1.20 119.70 137.21 B B B C3' O3' P DG DG DT 4 4 5 B B Y 1 -7.12 0.80 109.40 102.28 B B B O5' C5' C4' DT DT DT 5 5 5 A A N 1 10.83 1.20 115.70 126.53 B B B C5' C4' C3' DT DT DT 5 5 5 A N 1 -6.08 1.00 110.10 104.02 B B B C1' O4' C4' DT DT DT 8 8 8 N 1 12.72 1.20 119.70 132.42 B B B C3' O3' P DT DT DG 8 8 9 A Y 1 7.96 1.10 110.50 118.46 B B B O3' P OP2 DT DG DG 8 9 9 B B Y 1 -7.94 0.80 109.40 101.46 B B B O5' C5' C4' DG DG DG 9 9 9 A A N 1 -3.69 0.50 104.30 100.61 B B B C5 N7 C8 DG DG DG 9 9 9 N 1 3.54 0.50 113.10 116.64 B B B N7 C8 N9 DG DG DG 9 9 9 N 1 -9.53 0.80 109.40 99.87 B B B O5' C5' C4' DG DG DG 10 10 10 B B N 1 A A O3' P C38 DA 2 3 0.179 0.012 1.607 1.786 B Y 1 A A C5' C4' DA DA 3 3 0.060 0.007 1.512 1.572 B N 1 A A C5' C4' DG DG 4 4 0.045 0.007 1.512 1.557 A N 1 A A O3' P DG DT 4 5 -0.092 0.012 1.607 1.515 A A Y 1 A A O3' P DG DT 4 5 -0.090 0.012 1.607 1.517 B B Y 1 A A O3' C3' DC DC 7 7 0.205 0.013 1.435 1.640 A N 1 A A O3' C3' DC DC 7 7 -0.139 0.006 1.419 1.280 B N 1 A A C5' C4' DT DT 8 8 0.043 0.007 1.512 1.555 B N 1 B B O3' C3' DG DG 4 4 0.214 0.013 1.435 1.649 A N 1 B B O3' C3' DG DG 4 4 -0.045 0.006 1.419 1.374 B N 1 B B C5' C4' DT DT 5 5 0.061 0.007 1.512 1.573 B N 1 B B C5' C4' DG DG 9 9 0.060 0.007 1.512 1.572 B N 1 B B O3' C3' DG DG 9 9 -0.117 0.006 1.419 1.302 A N 1 B B O3' C3' DG DG 9 9 0.131 0.013 1.435 1.566 B N 1 B B C8 N9 DG DG 9 9 -0.076 0.007 1.374 1.298 N 1 B B C5' C4' DG DG 10 10 -0.086 0.011 1.509 1.423 A N 1 B B C5' C4' DG DG 10 10 0.093 0.007 1.512 1.605 B N 1 A B O O HOH HOH 162 224 1.92 1_555 6_464 12.059 0.12 0.00 0.00 0.12 0.00 -0.25 0.983 0.982 0.1237 0.1121 0.113 0.1127 0.95 23.44 2111 43176 41893 5.0 97.03 0.428 0.011 RANDOM 1 THROUGHOUT AB INITIO PHASING 0.017 MAXIMUM LIKELIHOOD BABINET MODEL PARAMETERS FOR MASK CACLULATION 0.95 23.44 237 733 90 406 0 0.286 0.258 0.979 149 2952 20 99.52 0.95 23.44 3OMJ 42494 41893 2.0 2.0 0.090 1 13.9 7.4 97.7 0.95 1.00 99.6 3.00 23.44 89.0 data collection CrystalClear phasing SHELXS refinement REFMAC 5.2.0019 data reduction MOSFLM data scaling SCALA Structural Basis for Cyclic Py-Im Polyamide Allosteric Inhibition of Nuclear Receptor Binding 1 N N 1 N N 2 N N 2 N N 2 N N 3 N N 2 N N 4 N N 4 N N covale 1.584 both A DC 1 A O3' DC 1 1_555 A C38 2 A P C38 2 1_555 covale 1.572 one A A C38 2 A O3' C38 2 1_555 A DA 3 A P DA 3 1_555 covale 1.786 one B A C38 2 A O3' C38 2 1_555 A DA 3 A P DA 3 1_555 covale 1.567 both B DC 1 B O3' DC 1 1_555 B C38 2 B P C38 2 1_555 covale 1.579 one B C38 2 B O3' C38 2 1_555 B DA 3 B P DA 3 1_555 metalc 2.323 A A HOH 32 H O HOH 1_555 A CA 300 D CA CA 1_555 metalc 2.334 B A HOH 32 H O HOH 1_555 A CA 301 E CA CA 1_555 metalc 2.539 A A HOH 34 H O HOH 1_555 A CA 300 D CA CA 1_555 metalc 2.233 B A HOH 34 H O HOH 1_555 A CA 301 E CA CA 1_555 metalc 2.494 B A HOH 41 H O HOH 1_555 A CA 301 E CA CA 1_555 metalc 2.759 A A A HOH 73 H O HOH 1_555 A CA 300 D CA CA 1_555 metalc 2.429 A HOH 124 H O HOH 1_555 A CA 302 C CA CA 1_555 metalc 2.720 A A HOH 133 H O HOH 1_555 A CA 300 D CA CA 1_555 metalc 2.287 B A HOH 133 H O HOH 1_555 A CA 301 E CA CA 1_555 metalc 2.168 A A A HOH 161 H O HOH 1_555 A CA 300 D CA CA 1_555 metalc 2.425 B B A HOH 161 H O HOH 1_555 A CA 301 E CA CA 1_555 metalc 2.393 A HOH 246 H O HOH 1_555 A CA 302 C CA CA 1_555 metalc 2.365 A HOH 247 H O HOH 1_555 A CA 302 C CA CA 1_555 metalc 2.438 A HOH 252 H O HOH 1_555 A CA 302 C CA CA 1_555 metalc 2.425 A HOH 253 H O HOH 1_555 A CA 302 C CA CA 1_555 metalc 2.444 A CA 302 C CA CA 1_555 B HOH 125 I O HOH 1_555 metalc 2.449 A CA 302 C CA CA 1_555 B HOH 245 I O HOH 1_555 metalc 2.311 B C38 2 B O1P C38 2 1_555 B CA 303 G CA CA 1_555 metalc 2.301 B HOH 45 I O HOH 1_555 B CA 303 G CA CA 1_555 metalc 2.355 B HOH 85 I O HOH 1_555 B CA 303 G CA CA 1_555 hydrog WATSON-CRICK A DC 1 A N3 DC 1 1_555 B DG 10 B N1 DG 10 1_555 hydrog WATSON-CRICK A DC 1 A N4 DC 1 1_555 B DG 10 B O6 DG 10 1_555 hydrog WATSON-CRICK A DC 1 A O2 DC 1 1_555 B DG 10 B N2 DG 10 1_555 hydrog WATSON-CRICK A C38 2 A N3 C38 2 1_555 B DG 9 B N1 DG 9 1_555 hydrog WATSON-CRICK A C38 2 A N4 C38 2 1_555 B DG 9 B O6 DG 9 1_555 hydrog WATSON-CRICK A C38 2 A O2 C38 2 1_555 B DG 9 B N2 DG 9 1_555 hydrog WATSON-CRICK A DA 3 A N1 DA 3 1_555 B DT 8 B N3 DT 8 1_555 hydrog WATSON-CRICK A DA 3 A N6 DA 3 1_555 B DT 8 B O4 DT 8 1_555 hydrog WATSON-CRICK A DG 4 A N1 DG 4 1_555 B DC 7 B N3 DC 7 1_555 hydrog WATSON-CRICK A DG 4 A N2 DG 4 1_555 B DC 7 B O2 DC 7 1_555 hydrog WATSON-CRICK A DG 4 A O6 DG 4 1_555 B DC 7 B N4 DC 7 1_555 hydrog WATSON-CRICK A DT 5 A N3 DT 5 1_555 B DA 6 B N1 DA 6 1_555 hydrog WATSON-CRICK A DT 5 A O4 DT 5 1_555 B DA 6 B N6 DA 6 1_555 hydrog WATSON-CRICK A DA 6 A N1 DA 6 1_555 B DT 5 B N3 DT 5 1_555 hydrog WATSON-CRICK A DA 6 A N6 DA 6 1_555 B DT 5 B O4 DT 5 1_555 hydrog WATSON-CRICK A DC 7 A N3 DC 7 1_555 B DG 4 B N1 DG 4 1_555 hydrog WATSON-CRICK A DC 7 A N4 DC 7 1_555 B DG 4 B O6 DG 4 1_555 hydrog WATSON-CRICK A DC 7 A O2 DC 7 1_555 B DG 4 B N2 DG 4 1_555 hydrog WATSON-CRICK A DT 8 A N3 DT 8 1_555 B DA 3 B N1 DA 3 1_555 hydrog WATSON-CRICK A DT 8 A O4 DT 8 1_555 B DA 3 B N6 DA 3 1_555 hydrog WATSON-CRICK A DG 9 A N1 DG 9 1_555 B C38 2 B N3 C38 2 1_555 hydrog WATSON-CRICK A DG 9 A N2 DG 9 1_555 B C38 2 B O2 C38 2 1_555 hydrog WATSON-CRICK A DG 9 A O6 DG 9 1_555 B C38 2 B N4 C38 2 1_555 hydrog WATSON-CRICK A DG 10 A N1 DG 10 1_555 B DC 1 B N3 DC 1 1_555 hydrog WATSON-CRICK A DG 10 A N2 DG 10 1_555 B DC 1 B O2 DC 1 1_555 hydrog WATSON-CRICK A DG 10 A O6 DG 10 1_555 B DC 1 B N4 DC 1 1_555 DNA cyclic Py-Im polyamide, DNA 3OMJ PDB 1 3OMJ CCAGTACTGG 1 10 3OMJ 1 10 3OMJ A 1 1 10 1 10 3OMJ 1 10 3OMJ B 1 1 10 BINDING SITE FOR RESIDUE CA A 302 A CA 302 Software 7 BINDING SITE FOR RESIDUE CA A 300 A CA 300 Software 6 BINDING SITE FOR RESIDUE CA A 301 A CA 301 Software 7 BINDING SITE FOR RESIDUE 1P2 B 500 B 1P2 500 Software 39 BINDING SITE FOR RESIDUE CA B 303 B CA 303 Software 6 A HOH 124 H HOH 7 1_555 A HOH 246 H HOH 7 1_555 A HOH 247 H HOH 7 1_555 A HOH 252 H HOH 7 1_555 A HOH 253 H HOH 7 1_555 B HOH 125 I HOH 7 1_555 B HOH 245 I HOH 7 1_555 A HOH 32 H HOH 6 1_555 A HOH 34 H HOH 6 1_555 A HOH 73 H HOH 6 1_555 A HOH 74 H HOH 6 1_555 A HOH 133 H HOH 6 1_555 A HOH 161 H HOH 6 1_555 A HOH 32 H HOH 7 1_555 A HOH 34 H HOH 7 1_555 A HOH 41 H HOH 7 1_555 A HOH 73 H HOH 7 1_555 A HOH 74 H HOH 7 1_555 A HOH 133 H HOH 7 1_555 A HOH 161 H HOH 7 1_555 A DC 1 A DC 1 39 4_454 A DG 4 A DG 4 39 1_555 A DT 5 A DT 5 39 1_555 A DA 6 A DA 6 39 1_555 A DC 7 A DC 7 39 1_555 A DT 8 A DT 8 39 1_555 A DG 9 A DG 9 39 1_555 A HOH 160 H HOH 39 1_555 A HOH 242 H HOH 39 4_454 B DC 1 B DC 1 39 3_555 B DG 4 B DG 4 39 1_555 B DT 5 B DT 5 39 1_555 B DA 6 B DA 6 39 1_555 B DC 7 B DC 7 39 1_555 B DT 8 B DT 8 39 1_555 B DG 9 B DG 9 39 1_555 B DG 10 B DG 10 39 6_454 B HOH 31 I HOH 39 1_555 B HOH 39 I HOH 39 1_555 B HOH 40 I HOH 39 1_555 B HOH 47 I HOH 39 1_555 B HOH 53 I HOH 39 1_555 B HOH 56 I HOH 39 1_555 B HOH 86 I HOH 39 1_555 B HOH 87 I HOH 39 1_555 B HOH 102 I HOH 39 1_555 B HOH 129 I HOH 39 1_555 B HOH 137 I HOH 39 1_555 B HOH 138 I HOH 39 1_555 B HOH 146 I HOH 39 1_555 B HOH 159 I HOH 39 1_555 B HOH 169 I HOH 39 1_555 B HOH 170 I HOH 39 1_555 B HOH 176 I HOH 39 1_555 B HOH 182 I HOH 39 1_555 B HOH 198 I HOH 39 1_555 B HOH 200 I HOH 39 1_555 B HOH 203 I HOH 39 1_555 B HOH 204 I HOH 39 1_555 B C38 2 B C38 2 6 1_555 B C38 2 B C38 2 6 8_664 B HOH 45 I HOH 6 8_664 B HOH 45 I HOH 6 1_555 B HOH 85 I HOH 6 1_555 B HOH 85 I HOH 6 8_664 92 P 41 21 2