0.013910
0.000000
0.000000
0.000000
0.013067
0.000000
0.000000
0.000000
0.012582
0.00000
0.00000
0.00000
Koester, H.
Heine, A.
Klebe, G.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
71.890
76.530
79.480
C17 H18 Br N3 O2
376.248
(2R)-4-amino-N'-[(1E)-(3-bromo-4-hydroxyphenyl)methylidene]-2-phenylbutanehydrazide
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H8 N O6 P
185.072
n
PHOSPHOSERINE
PHOSPHONOSERINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C4 H10 N O6 P
199.099
n
PHOSPHOTHREONINE
PHOSPHONOTHREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
N
2
N
N
N
3
N
O
N
4
N
BR
Y
5
N
C
N
6
N
N
N
7
N
O
N
8
N
C
N
9
N
N
N
10
N
C
N
11
R
C
Y
12
N
C
Y
13
N
C
Y
14
N
C
Y
15
N
C
Y
16
N
C
Y
17
N
C
Y
18
N
C
Y
19
N
C
Y
20
N
C
Y
21
N
C
Y
22
N
C
N
23
N
C
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
N
N
43
S
C
N
44
N
C
N
45
N
O
N
46
N
C
N
47
N
O
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
N
N
56
S
C
N
57
N
C
N
58
N
O
N
59
N
C
N
60
N
C
N
61
N
C
N
62
N
N
N
63
N
C
N
64
N
N
N
65
N
N
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
N
N
83
S
C
N
84
N
C
N
85
N
O
N
86
N
C
N
87
N
C
N
88
N
O
N
89
N
N
N
90
N
O
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
N
N
100
S
C
N
101
N
C
N
102
N
O
N
103
N
C
N
104
N
C
N
105
N
O
N
106
N
O
N
107
N
O
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
N
N
116
R
C
N
117
N
C
N
118
N
O
N
119
N
C
N
120
N
S
N
121
N
O
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
N
N
130
S
C
N
131
N
C
N
132
N
O
N
133
N
C
N
134
N
C
N
135
N
C
N
136
N
O
N
137
N
N
N
138
N
O
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
N
N
150
S
C
N
151
N
C
N
152
N
O
N
153
N
C
N
154
N
C
N
155
N
C
N
156
N
O
N
157
N
O
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
N
N
169
N
C
N
170
N
C
N
171
N
O
N
172
N
O
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
N
N
179
S
C
N
180
N
C
N
181
N
O
N
182
N
C
Y
183
N
C
Y
184
N
N
Y
185
N
C
Y
186
N
C
Y
187
N
N
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
O
N
200
N
H
N
201
N
H
N
202
N
N
N
203
S
C
N
204
N
C
N
205
N
O
N
206
S
C
N
207
N
C
N
208
N
C
N
209
N
C
N
210
N
O
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
N
N
225
S
C
N
226
N
C
N
227
N
O
N
228
N
C
N
229
N
C
N
230
N
C
N
231
N
C
N
232
N
O
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
N
N
247
S
C
N
248
N
C
N
249
N
O
N
250
N
C
N
251
N
C
N
252
N
C
N
253
N
C
N
254
N
N
N
255
N
O
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
N
N
272
S
C
N
273
N
C
N
274
N
O
N
275
N
C
N
276
N
C
N
277
N
S
N
278
N
C
N
279
N
O
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
N
N
292
S
C
N
293
N
C
N
294
N
O
N
295
N
C
Y
296
N
C
Y
297
N
C
Y
298
N
C
Y
299
N
C
Y
300
N
C
Y
301
N
C
N
302
N
O
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
N
N
315
S
C
N
316
N
C
N
317
N
O
N
318
N
C
N
319
N
C
N
320
N
C
N
321
N
O
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
N
N
332
S
C
N
333
N
C
N
334
N
O
N
335
N
C
N
336
N
O
N
337
N
O
N
338
N
P
N
339
N
O
N
340
N
O
N
341
N
O
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
N
N
351
S
C
N
352
N
C
N
353
N
O
N
354
N
C
N
355
N
O
N
356
N
O
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
N
N
365
S
C
N
366
N
C
N
367
N
O
N
368
R
C
N
369
N
O
N
370
N
C
N
371
N
O
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
N
N
382
S
C
N
383
R
C
N
384
N
C
N
385
N
O
N
386
N
P
N
387
N
O
N
388
N
O
N
389
N
O
N
390
N
C
N
391
N
O
N
392
N
O
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
N
N
404
S
C
N
405
N
C
N
406
N
O
N
407
N
C
Y
408
N
C
Y
409
N
C
Y
410
N
C
Y
411
N
N
Y
412
N
C
Y
413
N
C
Y
414
N
C
Y
415
N
C
Y
416
N
C
N
417
N
O
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
N
N
431
S
C
N
432
N
C
N
433
N
O
N
434
N
C
Y
435
N
C
Y
436
N
C
Y
437
N
C
Y
438
N
C
Y
439
N
C
Y
440
N
C
N
441
N
O
N
442
N
O
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
N
N
455
S
C
N
456
N
C
N
457
N
O
N
458
N
C
N
459
N
C
N
460
N
C
N
461
N
O
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
Y
10
N
doub
N
11
E
sing
Y
12
N
sing
N
13
N
doub
N
14
N
sing
N
15
N
doub
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
Y
23
N
doub
Y
24
N
sing
Y
25
N
doub
N
26
N
sing
Y
27
N
sing
N
28
N
sing
Y
29
N
doub
Y
30
N
sing
N
31
N
sing
Y
32
N
sing
N
33
N
sing
Y
34
N
doub
N
35
N
sing
Y
36
N
sing
N
37
N
sing
Y
38
N
doub
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
doub
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
doub
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
doub
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
doub
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
doub
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
doub
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
doub
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
doub
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
doub
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
Y
182
N
sing
Y
183
N
doub
Y
184
N
doub
N
185
N
sing
Y
186
N
sing
N
187
N
sing
Y
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
doub
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
doub
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
doub
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
Y
290
N
doub
Y
291
N
sing
Y
292
N
sing
N
293
N
sing
Y
294
N
doub
N
295
N
sing
Y
296
N
doub
N
297
N
sing
Y
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
doub
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
doub
N
330
N
sing
N
331
N
sing
N
332
N
doub
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
doub
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
doub
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
doub
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
doub
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
doub
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
Y
398
N
doub
Y
399
N
sing
Y
400
N
sing
N
401
N
sing
Y
402
N
doub
Y
403
N
sing
Y
404
N
sing
N
405
N
sing
Y
406
N
sing
Y
407
N
doub
N
408
N
sing
Y
409
N
doub
N
410
N
sing
Y
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
doub
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
Y
426
N
doub
Y
427
N
sing
Y
428
N
sing
N
429
N
sing
Y
430
N
doub
N
431
N
sing
Y
432
N
doub
N
433
N
sing
Y
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
doub
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
To be Published
0353
Fragment based drug design on PKA
10.2210/pdb3p0m/pdb
pdb_00003p0m
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
mirrors
CCD
2010-03-27
RAYONIX MX-225
Double Crystal Monochromator KMC-2
SINGLE WAVELENGTH
M
x-ray
1
0.91841
1.0
14.2
BESSY
0.91841
SYNCHROTRON
BESSY BEAMLINE 14.2
40808.570
cAMP-dependent protein kinase catalytic subunit alpha
2.7.11.11
1
man
polymer
2226.411
cAMP-dependent protein kinase inhibitor alpha
residues 5-24
1
syn
polymer
376.248
(2R)-4-amino-N'-[(1E)-(3-bromo-4-hydroxyphenyl)methylidene]-2-phenylbutanehydrazide
1
syn
non-polymer
18.015
water
218
nat
water
PKA C-alpha
PKI-alpha, cAMP-dependent protein kinase inhibitor, muscle/brain isoform
no
yes
MGNAAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV
VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS
LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW(TPO)LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY
PPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFI
PKFKGPGDTSNFDDYEEEEIRV(SEP)INEKCGKEFSEF
MGNAAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV
VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS
LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF
ADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK
GPGDTSNFDDYEEEEIRVSINEKCGKEFSEF
A
polypeptide(L)
no
no
TTYADFIASGRTGRRNAIHD
TTYADFIASGRTGRRNAIHD
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
PRKACA, PKACA
9606
Homo sapiens
562
Escherichia coli
1
2.54
51.58
VAPOR DIFFUSION, SITTING DROP
6.9
5mM MES, 5mM BisTris-propane, 75mM LiCl, 1mM DTT, 0.1mM EDTA, equilibrated against water/ethanol, pH 6.9, VAPOR DIFFUSION, SITTING DROP, temperature 277K
277
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_related
struct_conn
struct_site
repository
Initial release
Data collection
Database references
Derived calculations
1
0
2011-09-28
1
1
2023-11-29
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_related.db_name
_struct_conn.pdbx_leaving_atom_flag
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
human cAMP dependent protein kinase in complex with phenol
cAMP-dependent protein kinase PKA in complex with N-Methylurea
human cAMP-dependent protein kinase in complex with a small fragment
Human cAMP-dependent protein kinase in complex with an inhibitor
Human cAMP-dependent protein kinase in complex with an inhibitor
Human cAMP-dependent protein kinase in complex with an inhibitor
RCSB
Y
RCSB
2010-09-29
REL
REL
4SB
(2R)-4-amino-N'-[(1E)-(3-bromo-4-hydroxyphenyl)methylidene]-2-phenylbutanehydrazide
HOH
water
4SB
1
3
4SB
4SB
351
A
HOH
1
4
HOH
HOH
352
A
HOH
4
4
HOH
HOH
353
A
HOH
5
4
HOH
HOH
354
A
HOH
6
4
HOH
HOH
355
A
HOH
7
4
HOH
HOH
356
A
HOH
8
4
HOH
HOH
357
A
HOH
9
4
HOH
HOH
358
A
HOH
10
4
HOH
HOH
359
A
HOH
11
4
HOH
HOH
360
A
HOH
13
4
HOH
HOH
361
A
HOH
15
4
HOH
HOH
362
A
HOH
16
4
HOH
HOH
363
A
HOH
17
4
HOH
HOH
364
A
HOH
18
4
HOH
HOH
365
A
HOH
19
4
HOH
HOH
366
A
HOH
20
4
HOH
HOH
367
A
HOH
21
4
HOH
HOH
368
A
HOH
22
4
HOH
HOH
369
A
HOH
23
4
HOH
HOH
370
A
HOH
24
4
HOH
HOH
371
A
HOH
25
4
HOH
HOH
372
A
HOH
26
4
HOH
HOH
373
A
HOH
27
4
HOH
HOH
374
A
HOH
28
4
HOH
HOH
375
A
HOH
29
4
HOH
HOH
376
A
HOH
30
4
HOH
HOH
377
A
HOH
34
4
HOH
HOH
378
A
HOH
35
4
HOH
HOH
379
A
HOH
36
4
HOH
HOH
380
A
HOH
37
4
HOH
HOH
381
A
HOH
38
4
HOH
HOH
382
A
HOH
39
4
HOH
HOH
383
A
HOH
40
4
HOH
HOH
384
A
HOH
41
4
HOH
HOH
385
A
HOH
42
4
HOH
HOH
386
A
HOH
43
4
HOH
HOH
387
A
HOH
44
4
HOH
HOH
388
A
HOH
46
4
HOH
HOH
389
A
HOH
47
4
HOH
HOH
390
A
HOH
48
4
HOH
HOH
391
A
HOH
49
4
HOH
HOH
392
A
HOH
50
4
HOH
HOH
393
A
HOH
51
4
HOH
HOH
394
A
HOH
53
4
HOH
HOH
395
A
HOH
54
4
HOH
HOH
396
A
HOH
55
4
HOH
HOH
397
A
HOH
56
4
HOH
HOH
398
A
HOH
57
4
HOH
HOH
399
A
HOH
59
4
HOH
HOH
400
A
HOH
60
4
HOH
HOH
401
A
HOH
61
4
HOH
HOH
402
A
HOH
62
4
HOH
HOH
403
A
HOH
63
4
HOH
HOH
404
A
HOH
64
4
HOH
HOH
405
A
HOH
65
4
HOH
HOH
406
A
HOH
66
4
HOH
HOH
407
A
HOH
67
4
HOH
HOH
408
A
HOH
68
4
HOH
HOH
409
A
HOH
69
4
HOH
HOH
410
A
HOH
70
4
HOH
HOH
411
A
HOH
71
4
HOH
HOH
412
A
HOH
72
4
HOH
HOH
413
A
HOH
73
4
HOH
HOH
414
A
HOH
74
4
HOH
HOH
415
A
HOH
75
4
HOH
HOH
416
A
HOH
76
4
HOH
HOH
417
A
HOH
77
4
HOH
HOH
418
A
HOH
78
4
HOH
HOH
419
A
HOH
79
4
HOH
HOH
420
A
HOH
80
4
HOH
HOH
421
A
HOH
81
4
HOH
HOH
422
A
HOH
82
4
HOH
HOH
423
A
HOH
83
4
HOH
HOH
424
A
HOH
84
4
HOH
HOH
425
A
HOH
85
4
HOH
HOH
426
A
HOH
86
4
HOH
HOH
427
A
HOH
87
4
HOH
HOH
428
A
HOH
88
4
HOH
HOH
429
A
HOH
90
4
HOH
HOH
430
A
HOH
91
4
HOH
HOH
431
A
HOH
92
4
HOH
HOH
432
A
HOH
94
4
HOH
HOH
433
A
HOH
95
4
HOH
HOH
434
A
HOH
96
4
HOH
HOH
435
A
HOH
97
4
HOH
HOH
436
A
HOH
98
4
HOH
HOH
437
A
HOH
99
4
HOH
HOH
438
A
HOH
100
4
HOH
HOH
439
A
HOH
102
4
HOH
HOH
440
A
HOH
103
4
HOH
HOH
441
A
HOH
104
4
HOH
HOH
442
A
HOH
105
4
HOH
HOH
443
A
HOH
106
4
HOH
HOH
444
A
HOH
107
4
HOH
HOH
445
A
HOH
108
4
HOH
HOH
446
A
HOH
109
4
HOH
HOH
447
A
HOH
113
4
HOH
HOH
448
A
HOH
114
4
HOH
HOH
449
A
HOH
115
4
HOH
HOH
450
A
HOH
116
4
HOH
HOH
451
A
HOH
117
4
HOH
HOH
452
A
HOH
119
4
HOH
HOH
453
A
HOH
120
4
HOH
HOH
454
A
HOH
121
4
HOH
HOH
455
A
HOH
122
4
HOH
HOH
456
A
HOH
123
4
HOH
HOH
457
A
HOH
124
4
HOH
HOH
458
A
HOH
125
4
HOH
HOH
459
A
HOH
126
4
HOH
HOH
460
A
HOH
127
4
HOH
HOH
461
A
HOH
128
4
HOH
HOH
462
A
HOH
130
4
HOH
HOH
463
A
HOH
131
4
HOH
HOH
464
A
HOH
132
4
HOH
HOH
465
A
HOH
133
4
HOH
HOH
466
A
HOH
134
4
HOH
HOH
467
A
HOH
136
4
HOH
HOH
468
A
HOH
137
4
HOH
HOH
469
A
HOH
138
4
HOH
HOH
470
A
HOH
139
4
HOH
HOH
471
A
HOH
140
4
HOH
HOH
472
A
HOH
141
4
HOH
HOH
473
A
HOH
142
4
HOH
HOH
474
A
HOH
143
4
HOH
HOH
475
A
HOH
144
4
HOH
HOH
476
A
HOH
145
4
HOH
HOH
477
A
HOH
146
4
HOH
HOH
478
A
HOH
147
4
HOH
HOH
479
A
HOH
148
4
HOH
HOH
480
A
HOH
149
4
HOH
HOH
481
A
HOH
150
4
HOH
HOH
482
A
HOH
151
4
HOH
HOH
483
A
HOH
152
4
HOH
HOH
484
A
HOH
153
4
HOH
HOH
485
A
HOH
154
4
HOH
HOH
486
A
HOH
155
4
HOH
HOH
487
A
HOH
156
4
HOH
HOH
488
A
HOH
158
4
HOH
HOH
489
A
HOH
159
4
HOH
HOH
490
A
HOH
160
4
HOH
HOH
491
A
HOH
161
4
HOH
HOH
492
A
HOH
162
4
HOH
HOH
493
A
HOH
164
4
HOH
HOH
494
A
HOH
165
4
HOH
HOH
495
A
HOH
167
4
HOH
HOH
496
A
HOH
168
4
HOH
HOH
497
A
HOH
169
4
HOH
HOH
498
A
HOH
170
4
HOH
HOH
499
A
HOH
171
4
HOH
HOH
500
A
HOH
174
4
HOH
HOH
501
A
HOH
175
4
HOH
HOH
502
A
HOH
176
4
HOH
HOH
503
A
HOH
180
4
HOH
HOH
504
A
HOH
181
4
HOH
HOH
505
A
HOH
182
4
HOH
HOH
506
A
HOH
183
4
HOH
HOH
507
A
HOH
186
4
HOH
HOH
508
A
HOH
187
4
HOH
HOH
509
A
HOH
188
4
HOH
HOH
510
A
HOH
189
4
HOH
HOH
511
A
HOH
191
4
HOH
HOH
512
A
HOH
192
4
HOH
HOH
513
A
HOH
193
4
HOH
HOH
514
A
HOH
197
4
HOH
HOH
515
A
HOH
199
4
HOH
HOH
516
A
HOH
202
4
HOH
HOH
517
A
HOH
204
4
HOH
HOH
518
A
HOH
210
4
HOH
HOH
519
A
HOH
217
4
HOH
HOH
520
A
HOH
224
4
HOH
HOH
521
A
HOH
226
4
HOH
HOH
522
A
HOH
234
4
HOH
HOH
523
A
HOH
235
4
HOH
HOH
524
A
HOH
236
4
HOH
HOH
525
A
HOH
237
4
HOH
HOH
526
A
HOH
244
4
HOH
HOH
527
A
HOH
247
4
HOH
HOH
528
A
HOH
249
4
HOH
HOH
529
A
HOH
252
4
HOH
HOH
530
A
HOH
253
4
HOH
HOH
531
A
HOH
254
4
HOH
HOH
532
A
HOH
256
4
HOH
HOH
533
A
HOH
257
4
HOH
HOH
534
A
HOH
260
4
HOH
HOH
535
A
HOH
261
4
HOH
HOH
536
A
HOH
265
4
HOH
HOH
537
A
HOH
267
4
HOH
HOH
538
A
HOH
273
4
HOH
HOH
539
A
HOH
275
4
HOH
HOH
540
A
HOH
280
4
HOH
HOH
541
A
HOH
286
4
HOH
HOH
542
A
HOH
289
4
HOH
HOH
543
A
HOH
295
4
HOH
HOH
544
A
HOH
298
4
HOH
HOH
545
A
HOH
2
4
HOH
HOH
2
B
HOH
3
4
HOH
HOH
3
B
HOH
12
4
HOH
HOH
25
B
HOH
14
4
HOH
HOH
26
B
HOH
31
4
HOH
HOH
31
B
HOH
32
4
HOH
HOH
32
B
HOH
33
4
HOH
HOH
33
B
HOH
45
4
HOH
HOH
45
B
HOH
52
4
HOH
HOH
52
B
HOH
58
4
HOH
HOH
58
B
HOH
93
4
HOH
HOH
93
B
HOH
101
4
HOH
HOH
101
B
HOH
110
4
HOH
HOH
110
B
HOH
111
4
HOH
HOH
111
B
HOH
112
4
HOH
HOH
112
B
HOH
118
4
HOH
HOH
118
B
HOH
157
4
HOH
HOH
157
B
HOH
163
4
HOH
HOH
163
B
HOH
166
4
HOH
HOH
166
B
HOH
172
4
HOH
HOH
172
B
HOH
184
4
HOH
HOH
184
B
HOH
248
4
HOH
HOH
248
B
HOH
258
4
HOH
HOH
258
B
HOH
89
4
HOH
HOH
546
B
n
1
0
A
n
2
1
A
n
3
2
A
n
4
3
A
n
5
4
A
n
6
5
A
n
7
6
A
n
8
7
A
n
9
8
A
n
10
9
A
n
11
10
A
n
12
11
A
n
13
12
A
n
14
13
A
SER
14
n
15
SER
14
A
VAL
15
n
16
VAL
15
A
ALA
16
n
17
LYS
16
A
ALA
17
n
18
GLU
17
A
PHE
18
n
19
PHE
18
A
LEU
19
n
20
LEU
19
A
ALA
20
n
21
ALA
20
A
ALA
21
n
22
LYS
21
A
ALA
22
n
23
ALA
22
A
LYS
23
n
24
LYS
23
A
ALA
24
n
25
GLU
24
A
ASP
25
n
26
ASP
25
A
PHE
26
n
27
PHE
26
A
LEU
27
n
28
LEU
27
A
LYS
28
n
29
LYS
28
A
LYS
29
n
30
LYS
29
A
TRP
30
n
31
TRP
30
A
GLU
31
n
32
GLU
31
A
SER
32
n
33
SER
32
A
PRO
33
n
34
PRO
33
A
ALA
34
n
35
ALA
34
A
GLN
35
n
36
GLN
35
A
ASN
36
n
37
ASN
36
A
THR
37
n
38
THR
37
A
ALA
38
n
39
ALA
38
A
HIS
39
n
40
HIS
39
A
LEU
40
n
41
LEU
40
A
ASP
41
n
42
ASP
41
A
GLN
42
n
43
GLN
42
A
PHE
43
n
44
PHE
43
A
ALA
44
n
45
GLU
44
A
ARG
45
n
46
ARG
45
A
ILE
46
n
47
ILE
46
A
LYS
47
n
48
LYS
47
A
THR
48
n
49
THR
48
A
LEU
49
n
50
LEU
49
A
GLY
50
n
51
GLY
50
A
THR
51
n
52
THR
51
A
GLY
52
n
53
GLY
52
A
SER
53
n
54
SER
53
A
PHE
54
n
55
PHE
54
A
GLY
55
n
56
GLY
55
A
ARG
56
n
57
ARG
56
A
VAL
57
n
58
VAL
57
A
MET
58
n
59
MET
58
A
LEU
59
n
60
LEU
59
A
VAL
60
n
61
VAL
60
A
LYS
61
n
62
LYS
61
A
HIS
62
n
63
HIS
62
A
LYS
63
n
64
LYS
63
A
ALA
64
n
65
GLU
64
A
THR
65
n
66
THR
65
A
GLY
66
n
67
GLY
66
A
ASN
67
n
68
ASN
67
A
HIS
68
n
69
HIS
68
A
TYR
69
n
70
TYR
69
A
ALA
70
n
71
ALA
70
A
MET
71
n
72
MET
71
A
LYS
72
n
73
LYS
72
A
ILE
73
n
74
ILE
73
A
LEU
74
n
75
LEU
74
A
ASP
75
n
76
ASP
75
A
LYS
76
n
77
LYS
76
A
GLN
77
n
78
GLN
77
A
LYS
78
n
79
LYS
78
A
VAL
79
n
80
VAL
79
A
VAL
80
n
81
VAL
80
A
LYS
81
n
82
LYS
81
A
LEU
82
n
83
LEU
82
A
LYS
83
n
84
LYS
83
A
GLN
84
n
85
GLN
84
A
ILE
85
n
86
ILE
85
A
GLU
86
n
87
GLU
86
A
HIS
87
n
88
HIS
87
A
THR
88
n
89
THR
88
A
LEU
89
n
90
LEU
89
A
ASN
90
n
91
ASN
90
A
GLU
91
n
92
GLU
91
A
LYS
92
n
93
LYS
92
A
ARG
93
n
94
ARG
93
A
ILE
94
n
95
ILE
94
A
LEU
95
n
96
LEU
95
A
GLN
96
n
97
GLN
96
A
ALA
97
n
98
ALA
97
A
VAL
98
n
99
VAL
98
A
ASN
99
n
100
ASN
99
A
PHE
100
n
101
PHE
100
A
PRO
101
n
102
PRO
101
A
PHE
102
n
103
PHE
102
A
LEU
103
n
104
LEU
103
A
VAL
104
n
105
VAL
104
A
ALA
105
n
106
LYS
105
A
LEU
106
n
107
LEU
106
A
GLU
107
n
108
GLU
107
A
PHE
108
n
109
PHE
108
A
SER
109
n
110
SER
109
A
PHE
110
n
111
PHE
110
A
LYS
111
n
112
LYS
111
A
ASP
112
n
113
ASP
112
A
ASN
113
n
114
ASN
113
A
SER
114
n
115
SER
114
A
ASN
115
n
116
ASN
115
A
LEU
116
n
117
LEU
116
A
TYR
117
n
118
TYR
117
A
MET
118
n
119
MET
118
A
VAL
119
n
120
VAL
119
A
MET
120
n
121
MET
120
A
ALA
121
n
122
GLU
121
A
TYR
122
n
123
TYR
122
A
VAL
123
n
124
VAL
123
A
PRO
124
n
125
PRO
124
A
GLY
125
n
126
GLY
125
A
GLY
126
n
127
GLY
126
A
GLU
127
n
128
GLU
127
A
MET
128
n
129
MET
128
A
PHE
129
n
130
PHE
129
A
SER
130
n
131
SER
130
A
HIS
131
n
132
HIS
131
A
LEU
132
n
133
LEU
132
A
ARG
133
n
134
ARG
133
A
ARG
134
n
135
ARG
134
A
ILE
135
n
136
ILE
135
A
GLY
136
n
137
GLY
136
A
ARG
137
n
138
ARG
137
A
PHE
138
n
139
PHE
138
A
SER
139
n
140
SER
139
A
GLU
140
n
141
GLU
140
A
PRO
141
n
142
PRO
141
A
HIS
142
n
143
HIS
142
A
ALA
143
n
144
ALA
143
A
ARG
144
n
145
ARG
144
A
PHE
145
n
146
PHE
145
A
TYR
146
n
147
TYR
146
A
ALA
147
n
148
ALA
147
A
ALA
148
n
149
ALA
148
A
GLN
149
n
150
GLN
149
A
ILE
150
n
151
ILE
150
A
VAL
151
n
152
VAL
151
A
LEU
152
n
153
LEU
152
A
THR
153
n
154
THR
153
A
PHE
154
n
155
PHE
154
A
GLU
155
n
156
GLU
155
A
TYR
156
n
157
TYR
156
A
LEU
157
n
158
LEU
157
A
HIS
158
n
159
HIS
158
A
SER
159
n
160
SER
159
A
LEU
160
n
161
LEU
160
A
ASP
161
n
162
ASP
161
A
LEU
162
n
163
LEU
162
A
ILE
163
n
164
ILE
163
A
TYR
164
n
165
TYR
164
A
ARG
165
n
166
ARG
165
A
ASP
166
n
167
ASP
166
A
LEU
167
n
168
LEU
167
A
LYS
168
n
169
LYS
168
A
PRO
169
n
170
PRO
169
A
GLU
170
n
171
GLU
170
A
ASN
171
n
172
ASN
171
A
LEU
172
n
173
LEU
172
A
LEU
173
n
174
LEU
173
A
ILE
174
n
175
ILE
174
A
ASP
175
n
176
ASP
175
A
GLN
176
n
177
GLN
176
A
GLN
177
n
178
GLN
177
A
GLY
178
n
179
GLY
178
A
TYR
179
n
180
TYR
179
A
ILE
180
n
181
ILE
180
A
GLN
181
n
182
GLN
181
A
VAL
182
n
183
VAL
182
A
THR
183
n
184
THR
183
A
ASP
184
n
185
ASP
184
A
PHE
185
n
186
PHE
185
A
GLY
186
n
187
GLY
186
A
PHE
187
n
188
PHE
187
A
ALA
188
n
189
ALA
188
A
LYS
189
n
190
LYS
189
A
ARG
190
n
191
ARG
190
A
VAL
191
n
192
VAL
191
A
LYS
192
n
193
LYS
192
A
GLY
193
n
194
GLY
193
A
ARG
194
n
195
ARG
194
A
THR
195
n
196
THR
195
A
TRP
196
n
197
TRP
196
A
TPO
197
n
198
TPO
197
A
ALA
198
n
199
LEU
198
A
CYS
199
n
200
CYS
199
A
GLY
200
n
201
GLY
200
A
THR
201
n
202
THR
201
A
PRO
202
n
203
PRO
202
A
GLU
203
n
204
GLU
203
A
TYR
204
n
205
TYR
204
A
LEU
205
n
206
LEU
205
A
ALA
206
n
207
ALA
206
A
PRO
207
n
208
PRO
207
A
GLU
208
n
209
GLU
208
A
ILE
209
n
210
ILE
209
A
ILE
210
n
211
ILE
210
A
LEU
211
n
212
LEU
211
A
SER
212
n
213
SER
212
A
ALA
213
n
214
LYS
213
A
GLY
214
n
215
GLY
214
A
TYR
215
n
216
TYR
215
A
ASN
216
n
217
ASN
216
A
ALA
217
n
218
LYS
217
A
ALA
218
n
219
ALA
218
A
VAL
219
n
220
VAL
219
A
ASP
220
n
221
ASP
220
A
TRP
221
n
222
TRP
221
A
TRP
222
n
223
TRP
222
A
ALA
223
n
224
ALA
223
A
LEU
224
n
225
LEU
224
A
GLY
225
n
226
GLY
225
A
VAL
226
n
227
VAL
226
A
LEU
227
n
228
LEU
227
A
ILE
228
n
229
ILE
228
A
TYR
229
n
230
TYR
229
A
GLU
230
n
231
GLU
230
A
MET
231
n
232
MET
231
A
ALA
232
n
233
ALA
232
A
ALA
233
n
234
ALA
233
A
GLY
234
n
235
GLY
234
A
TYR
235
n
236
TYR
235
A
PRO
236
n
237
PRO
236
A
PRO
237
n
238
PRO
237
A
PHE
238
n
239
PHE
238
A
PHE
239
n
240
PHE
239
A
ALA
240
n
241
ALA
240
A
ASP
241
n
242
ASP
241
A
GLN
242
n
243
GLN
242
A
PRO
243
n
244
PRO
243
A
ILE
244
n
245
ILE
244
A
GLN
245
n
246
GLN
245
A
ILE
246
n
247
ILE
246
A
TYR
247
n
248
TYR
247
A
GLU
248
n
249
GLU
248
A
LYS
249
n
250
LYS
249
A
ILE
250
n
251
ILE
250
A
VAL
251
n
252
VAL
251
A
SER
252
n
253
SER
252
A
GLY
253
n
254
GLY
253
A
LYS
254
n
255
LYS
254
A
VAL
255
n
256
VAL
255
A
ALA
256
n
257
ARG
256
A
PHE
257
n
258
PHE
257
A
PRO
258
n
259
PRO
258
A
SER
259
n
260
SER
259
A
HIS
260
n
261
HIS
260
A
PHE
261
n
262
PHE
261
A
SER
262
n
263
SER
262
A
SER
263
n
264
SER
263
A
ASP
264
n
265
ASP
264
A
LEU
265
n
266
LEU
265
A
LYS
266
n
267
LYS
266
A
ASP
267
n
268
ASP
267
A
LEU
268
n
269
LEU
268
A
LEU
269
n
270
LEU
269
A
ARG
270
n
271
ARG
270
A
ASN
271
n
272
ASN
271
A
LEU
272
n
273
LEU
272
A
LEU
273
n
274
LEU
273
A
GLN
274
n
275
GLN
274
A
VAL
275
n
276
VAL
275
A
ASP
276
n
277
ASP
276
A
LEU
277
n
278
LEU
277
A
THR
278
n
279
THR
278
A
LYS
279
n
280
LYS
279
A
ARG
280
n
281
ARG
280
A
PHE
281
n
282
PHE
281
A
GLY
282
n
283
GLY
282
A
ASN
283
n
284
ASN
283
A
LEU
284
n
285
LEU
284
A
ALA
285
n
286
LYS
285
A
ASN
286
n
287
ASN
286
A
GLY
287
n
288
GLY
287
A
VAL
288
n
289
VAL
288
A
ASN
289
n
290
ASN
289
A
ASP
290
n
291
ASP
290
A
ILE
291
n
292
ILE
291
A
LYS
292
n
293
LYS
292
A
ASN
293
n
294
ASN
293
A
HIS
294
n
295
HIS
294
A
ALA
295
n
296
LYS
295
A
TRP
296
n
297
TRP
296
A
PHE
297
n
298
PHE
297
A
ALA
298
n
299
ALA
298
A
THR
299
n
300
THR
299
A
THR
300
n
301
THR
300
A
ASP
301
n
302
ASP
301
A
TRP
302
n
303
TRP
302
A
ILE
303
n
304
ILE
303
A
ALA
304
n
305
ALA
304
A
ILE
305
n
306
ILE
305
A
TYR
306
n
307
TYR
306
A
GLN
307
n
308
GLN
307
A
ARG
308
n
309
ARG
308
A
ALA
309
n
310
LYS
309
A
VAL
310
n
311
VAL
310
A
GLU
311
n
312
GLU
311
A
ALA
312
n
313
ALA
312
A
PRO
313
n
314
PRO
313
A
PHE
314
n
315
PHE
314
A
ILE
315
n
316
ILE
315
A
PRO
316
n
317
PRO
316
A
ALA
317
n
318
LYS
317
A
ALA
318
n
319
PHE
318
A
ALA
319
n
320
LYS
319
A
GLY
320
n
321
GLY
320
A
PRO
321
n
322
PRO
321
A
GLY
322
n
323
GLY
322
A
ASP
323
n
324
ASP
323
A
THR
324
n
325
THR
324
A
SER
325
n
326
SER
325
A
ASN
326
n
327
ASN
326
A
PHE
327
n
328
PHE
327
A
ASP
328
n
329
ASP
328
A
ASP
329
n
330
ASP
329
A
TYR
330
n
331
TYR
330
A
GLU
331
n
332
GLU
331
A
GLU
332
n
333
GLU
332
A
ALA
333
n
334
GLU
333
A
ALA
334
n
335
GLU
334
A
ILE
335
n
336
ILE
335
A
ARG
336
n
337
ARG
336
A
VAL
337
n
338
VAL
337
A
SEP
338
n
339
SEP
338
A
ILE
339
n
340
ILE
339
A
ASN
340
n
341
ASN
340
A
GLU
341
n
342
GLU
341
A
LYS
342
n
343
LYS
342
A
CYS
343
n
344
CYS
343
A
GLY
344
n
345
GLY
344
A
ALA
345
n
346
LYS
345
A
GLU
346
n
347
GLU
346
A
PHE
347
n
348
PHE
347
A
SER
348
n
349
SER
348
A
GLU
349
n
350
GLU
349
A
PHE
350
n
351
PHE
350
A
THR
5
n
1
THR
5
B
THR
6
n
2
THR
6
B
TYR
7
n
3
TYR
7
B
ALA
8
n
4
ALA
8
B
ASP
9
n
5
ASP
9
B
PHE
10
n
6
PHE
10
B
ILE
11
n
7
ILE
11
B
ALA
12
n
8
ALA
12
B
SER
13
n
9
SER
13
B
GLY
14
n
10
GLY
14
B
ARG
15
n
11
ARG
15
B
THR
16
n
12
THR
16
B
GLY
17
n
13
GLY
17
B
ARG
18
n
14
ARG
18
B
ARG
19
n
15
ARG
19
B
ASN
20
n
16
ASN
20
B
ALA
21
n
17
ALA
21
B
ILE
22
n
18
ILE
22
B
HIS
23
n
19
HIS
23
B
n
20
24
B
0.3605
0.0605
-0.2832
0.4916
0.8605
0.9939
0.0489
0.0122
0.0799
0.0282
0.0442
-0.0560
-0.0451
0.1452
0.0009
0.0798
-0.0265
-0.0244
0.1936
0.0038
0.2061
refined
34.9580
14.3249
5.0180
X-RAY DIFFRACTION
0.1728
0.2040
-0.0190
1.0285
0.5766
0.8513
-0.0376
0.0286
0.0132
0.0444
-0.0253
0.0139
0.1199
0.0404
-0.0001
0.1192
0.0047
0.0117
0.1529
0.0084
0.1351
refined
24.3068
1.5556
2.9663
X-RAY DIFFRACTION
0.7182
0.2656
-0.0940
1.1239
0.3892
1.2880
-0.0625
0.0349
-0.0762
0.0253
0.0524
-0.0241
0.2613
0.0913
0.0005
0.1833
0.0299
-0.0008
0.1495
0.0088
0.1411
refined
27.4360
-3.3389
0.1316
X-RAY DIFFRACTION
0.0110
-0.0825
0.0121
0.2256
-0.1637
0.1202
-0.1085
0.0653
0.0731
0.0234
-0.1460
0.0632
-0.0303
-0.0107
-0.0032
0.1971
-0.0275
-0.0155
0.1729
0.0105
0.1589
refined
13.7491
-1.1645
-9.5729
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
(CHAIN A AND RESID 14:72)
X-RAY DIFFRACTION
2
(CHAIN A AND RESID 73:251)
X-RAY DIFFRACTION
3
(CHAIN A AND RESID 252:350)
X-RAY DIFFRACTION
4
(CHAIN B AND RESID 5:23)
author_and_software_defined_assembly
PISA
2
dimeric
1920
-2
15400
A
TPO
197
PHOSPHOTHREONINE
A
TPO
198
THR
A
SEP
338
PHOSPHOSERINE
A
SEP
339
SER
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LYS
47
A
N
LYS
48
A
O
LEU
59
A
O
LEU
60
A
N
ARG
56
A
N
ARG
57
A
O
ILE
73
A
O
ILE
74
A
N
ALA
70
A
N
ALA
71
A
O
MET
120
A
O
MET
121
A
O
VAL
119
A
O
VAL
120
A
N
GLU
107
A
N
GLU
108
A
N
ILE
163
A
N
ILE
164
A
O
LYS
189
A
O
LYS
190
A
N
LEU
173
A
N
LEU
174
A
O
GLN
181
A
O
GLN
182
1
A
CG
LYS
16
A
CG
LYS
17
1
Y
1
A
CD
LYS
16
A
CD
LYS
17
1
Y
1
A
CE
LYS
16
A
CE
LYS
17
1
Y
1
A
NZ
LYS
16
A
NZ
LYS
17
1
Y
1
A
CG
GLU
17
A
CG
GLU
18
1
Y
1
A
CD
GLU
17
A
CD
GLU
18
1
Y
1
A
OE1
GLU
17
A
OE1
GLU
18
1
Y
1
A
OE2
GLU
17
A
OE2
GLU
18
1
Y
1
A
CG
LYS
21
A
CG
LYS
22
1
Y
1
A
CD
LYS
21
A
CD
LYS
22
1
Y
1
A
CE
LYS
21
A
CE
LYS
22
1
Y
1
A
NZ
LYS
21
A
NZ
LYS
22
1
Y
1
A
CG
GLU
24
A
CG
GLU
25
1
Y
1
A
CD
GLU
24
A
CD
GLU
25
1
Y
1
A
OE1
GLU
24
A
OE1
GLU
25
1
Y
1
A
OE2
GLU
24
A
OE2
GLU
25
1
Y
1
A
CG
GLU
44
A
CG
GLU
45
1
Y
1
A
CD
GLU
44
A
CD
GLU
45
1
Y
1
A
OE1
GLU
44
A
OE1
GLU
45
1
Y
1
A
OE2
GLU
44
A
OE2
GLU
45
1
Y
1
A
CG
GLU
64
A
CG
GLU
65
1
Y
1
A
CD
GLU
64
A
CD
GLU
65
1
Y
1
A
OE1
GLU
64
A
OE1
GLU
65
1
Y
1
A
OE2
GLU
64
A
OE2
GLU
65
1
Y
1
A
CG
LYS
105
A
CG
LYS
106
1
Y
1
A
CD
LYS
105
A
CD
LYS
106
1
Y
1
A
CE
LYS
105
A
CE
LYS
106
1
Y
1
A
NZ
LYS
105
A
NZ
LYS
106
1
Y
1
A
CG
GLU
121
A
CG
GLU
122
1
Y
1
A
CD
GLU
121
A
CD
GLU
122
1
Y
1
A
OE1
GLU
121
A
OE1
GLU
122
1
Y
1
A
OE2
GLU
121
A
OE2
GLU
122
1
Y
1
A
CG
LEU
198
A
CG
LEU
199
1
Y
1
A
CD1
LEU
198
A
CD1
LEU
199
1
Y
1
A
CD2
LEU
198
A
CD2
LEU
199
1
Y
1
A
CG
LYS
213
A
CG
LYS
214
1
Y
1
A
CD
LYS
213
A
CD
LYS
214
1
Y
1
A
CE
LYS
213
A
CE
LYS
214
1
Y
1
A
NZ
LYS
213
A
NZ
LYS
214
1
Y
1
A
CG
LYS
217
A
CG
LYS
218
1
Y
1
A
CD
LYS
217
A
CD
LYS
218
1
Y
1
A
CE
LYS
217
A
CE
LYS
218
1
Y
1
A
NZ
LYS
217
A
NZ
LYS
218
1
Y
1
A
CG
ARG
256
A
CG
ARG
257
1
Y
1
A
CD
ARG
256
A
CD
ARG
257
1
Y
1
A
NE
ARG
256
A
NE
ARG
257
1
Y
1
A
CZ
ARG
256
A
CZ
ARG
257
1
Y
1
A
NH1
ARG
256
A
NH1
ARG
257
1
Y
1
A
NH2
ARG
256
A
NH2
ARG
257
1
Y
1
A
CG
LYS
285
A
CG
LYS
286
1
Y
1
A
CD
LYS
285
A
CD
LYS
286
1
Y
1
A
CE
LYS
285
A
CE
LYS
286
1
Y
1
A
NZ
LYS
285
A
NZ
LYS
286
1
Y
1
A
CG
LYS
295
A
CG
LYS
296
1
Y
1
A
CD
LYS
295
A
CD
LYS
296
1
Y
1
A
CE
LYS
295
A
CE
LYS
296
1
Y
1
A
NZ
LYS
295
A
NZ
LYS
296
1
Y
1
A
CG
LYS
309
A
CG
LYS
310
1
Y
1
A
CD
LYS
309
A
CD
LYS
310
1
Y
1
A
CE
LYS
309
A
CE
LYS
310
1
Y
1
A
NZ
LYS
309
A
NZ
LYS
310
1
Y
1
A
CG
LYS
317
A
CG
LYS
318
1
Y
1
A
CD
LYS
317
A
CD
LYS
318
1
Y
1
A
CE
LYS
317
A
CE
LYS
318
1
Y
1
A
NZ
LYS
317
A
NZ
LYS
318
1
Y
1
A
CG
PHE
318
A
CG
PHE
319
1
Y
1
A
CD1
PHE
318
A
CD1
PHE
319
1
Y
1
A
CD2
PHE
318
A
CD2
PHE
319
1
Y
1
A
CE1
PHE
318
A
CE1
PHE
319
1
Y
1
A
CE2
PHE
318
A
CE2
PHE
319
1
Y
1
A
CZ
PHE
318
A
CZ
PHE
319
1
Y
1
A
CG
LYS
319
A
CG
LYS
320
1
Y
1
A
CD
LYS
319
A
CD
LYS
320
1
Y
1
A
CE
LYS
319
A
CE
LYS
320
1
Y
1
A
NZ
LYS
319
A
NZ
LYS
320
1
Y
1
A
CG
GLU
333
A
CG
GLU
334
1
Y
1
A
CD
GLU
333
A
CD
GLU
334
1
Y
1
A
OE1
GLU
333
A
OE1
GLU
334
1
Y
1
A
OE2
GLU
333
A
OE2
GLU
334
1
Y
1
A
CG
GLU
334
A
CG
GLU
335
1
Y
1
A
CD
GLU
334
A
CD
GLU
335
1
Y
1
A
OE1
GLU
334
A
OE1
GLU
335
1
Y
1
A
OE2
GLU
334
A
OE2
GLU
335
1
Y
1
A
CG
LYS
345
A
CG
LYS
346
1
Y
1
A
CD
LYS
345
A
CD
LYS
346
1
Y
1
A
CE
LYS
345
A
CE
LYS
346
1
Y
1
A
NZ
LYS
345
A
NZ
LYS
346
1
Y
1
A
MET
0
A
MET
1
1
Y
1
A
GLY
1
A
GLY
2
1
Y
1
A
ASN
2
A
ASN
3
1
Y
1
A
ALA
3
A
ALA
4
1
Y
1
A
ALA
4
A
ALA
5
1
Y
1
A
ALA
5
A
ALA
6
1
Y
1
A
ALA
6
A
ALA
7
1
Y
1
A
LYS
7
A
LYS
8
1
Y
1
A
LYS
8
A
LYS
9
1
Y
1
A
GLY
9
A
GLY
10
1
Y
1
A
SER
10
A
SER
11
1
Y
1
A
GLU
11
A
GLU
12
1
Y
1
A
GLN
12
A
GLN
13
1
Y
1
A
GLU
13
A
GLU
14
1
Y
1
B
ASP
24
B
ASP
20
1
Y
1
A
ASN
99
-162.75
101.74
1
A
ASP
166
-147.33
38.09
1
A
ASP
184
59.80
84.94
2.6328
-0.0000
-0.0000
-1.2547
0.0000
-1.3781
0.2047
0.1693
0.1711
2.030
21.468
1321
27241
26939
4.90
93.04
0.19
1
1.00
MOLECULAR REPLACEMENT
19.05
0.83
1.10
ML
FLAT BULK SOLVENT MODEL
39.375
0.332
2.030
21.468
218
3087
23
0
2846
0.007
2973
1.008
4036
12.933
1069
0.067
432
0.005
516
0.2671
0.1992
2.1112
134
2517
84.00
0.2550
0.1883
2.2072
139
2729
91.00
0.2320
0.1758
2.3235
124
2773
91.00
0.1980
0.1733
2.4689
137
2790
92.00
0.2269
0.1788
2.6592
158
2842
94.00
0.2488
0.1834
2.9262
159
2930
96.00
0.2194
0.1787
3.3482
160
2977
97.00
0.1796
0.1582
4.2132
163
3017
98.00
0.1657
0.1522
21.4688
147
3043
94.00
2.03
30
3P0M
28991
28991
0.086
1
13.3
3.6
100
2.03
2.06
2.3
0.470
1
3.6
100
data collection
MAR345dtb
phasing
PHASER
refinement
PHENIX
(phenix.refine: 1.6.4_486)
data reduction
HKL-2000
data scaling
HKL-2000
Human cAMP-dependent protein kinase in complex with an inhibitor
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
A
SER
14
A
SER
15
HELX_P
A
SER
32
A
SER
33
1
1
19
A
HIS
39
A
HIS
40
HELX_P
A
ASP
41
A
ASP
42
5
2
3
A
LYS
76
A
LYS
77
HELX_P
A
LEU
82
A
LEU
83
1
3
7
A
GLN
84
A
GLN
85
HELX_P
A
GLN
96
A
GLN
97
1
4
13
A
GLU
127
A
GLU
128
HELX_P
A
GLY
136
A
GLY
137
1
5
10
A
SER
139
A
SER
140
HELX_P
A
LEU
160
A
LEU
161
1
6
22
A
LYS
168
A
LYS
169
HELX_P
A
GLU
170
A
GLU
171
5
7
3
A
THR
201
A
THR
202
HELX_P
A
LEU
205
A
LEU
206
5
8
5
A
ALA
206
A
ALA
207
HELX_P
A
LEU
211
A
LEU
212
1
9
6
A
LYS
217
A
LYS
218
HELX_P
A
GLY
234
A
GLY
235
1
10
18
A
GLN
242
A
GLN
243
HELX_P
A
GLY
253
A
GLY
254
1
11
12
A
SER
262
A
SER
263
HELX_P
A
LEU
273
A
LEU
274
1
12
12
A
VAL
288
A
VAL
289
HELX_P
A
ASN
293
A
ASN
294
1
13
6
A
HIS
294
A
HIS
295
HELX_P
A
ALA
298
A
ALA
299
5
14
5
A
ASP
301
A
ASP
302
HELX_P
A
GLN
307
A
GLN
308
1
15
7
B
THR
5
B
THR
1
HELX_P
B
ALA
12
B
ALA
8
1
16
8
covale
1.331
both
A
TRP
196
A
C
TRP
197
1_555
A
TPO
197
A
N
TPO
198
1_555
covale
1.323
both
A
TPO
197
A
C
TPO
198
1_555
A
LEU
198
A
N
LEU
199
1_555
covale
1.330
both
A
VAL
337
A
C
VAL
338
1_555
A
SEP
338
A
N
SEP
339
1_555
covale
1.333
both
A
SEP
338
A
C
SEP
339
1_555
A
ILE
339
A
N
ILE
340
1_555
TRANSFERASE
TRANSFERASE, Phosphorylation
KAPCA_HUMAN
UNP
1
1
P17612
MGNAAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV
VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS
LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF
ADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK
GPGDTSNFDDYEEEEIRVSINEKCGKEFSEF
IPKA_HUMAN
UNP
2
6
P61925
TTYADFIASGRTGRRNAIHD
1
351
3P0M
0
350
P17612
A
1
1
351
6
25
3P0M
5
24
P61925
B
2
1
20
5
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
PHE
43
A
PHE
44
A
GLY
52
A
GLY
53
A
GLY
55
A
GLY
56
A
HIS
62
A
HIS
63
A
HIS
68
A
HIS
69
A
ASP
75
A
ASP
76
A
ASN
115
A
ASN
116
A
GLU
121
A
GLU
122
A
LEU
106
A
LEU
107
A
LYS
111
A
LYS
112
A
LEU
162
A
LEU
163
A
ILE
163
A
ILE
164
A
LYS
189
A
LYS
190
A
ARG
190
A
ARG
191
A
LEU
172
A
LEU
173
A
ILE
174
A
ILE
175
A
ILE
180
A
ILE
181
A
VAL
182
A
VAL
183
BINDING SITE FOR RESIDUE 4SB A 351
A
4SB
351
Software
17
A
THR
51
A
THR
52
17
1_555
A
GLY
52
A
GLY
53
17
1_555
A
GLY
55
A
GLY
56
17
1_555
A
VAL
57
A
VAL
58
17
1_555
A
ALA
70
A
ALA
71
17
1_555
A
LYS
72
A
LYS
73
17
1_555
A
LEU
74
A
LEU
75
17
1_555
A
GLU
121
A
GLU
122
17
1_555
A
TYR
122
A
TYR
123
17
1_555
A
VAL
123
A
VAL
124
17
1_555
A
ASN
171
A
ASN
172
17
1_555
A
LEU
173
A
LEU
174
17
1_555
A
ASP
184
A
ASP
185
17
1_555
A
PHE
327
A
PHE
328
17
1_555
A
HOH
382
D
HOH
17
1_555
A
HOH
462
D
HOH
17
1_555
A
HOH
512
D
HOH
17
1_555
19
P 21 21 21