0.021477
0.000000
0.000000
0.000000
0.016663
0.000000
0.000000
0.000000
0.009403
0.00000
0.00000
0.00000
Wolberger, C.
Bheda, P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
46.561
60.013
106.345
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C9 H18 N2 O3
202.251
n
N~6~-propanoyl-L-lysine
N(6)-Propionyllysine
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
C
N
274
N
N
N
275
N
O
N
276
S
C
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
C
N
281
N
N
N
282
N
C
N
283
N
O
N
284
N
C
N
285
N
C
N
286
N
O
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
N
C
N
310
N
C
N
311
N
C
N
312
N
O
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
N
N
323
S
C
N
324
N
C
N
325
N
O
N
326
N
C
N
327
N
O
N
328
N
O
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
N
N
337
S
C
N
338
N
C
N
339
N
O
N
340
R
C
N
341
N
O
N
342
N
C
N
343
N
O
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
N
N
354
S
C
N
355
N
C
N
356
N
O
N
357
N
C
Y
358
N
C
Y
359
N
C
Y
360
N
C
Y
361
N
C
Y
362
N
C
Y
363
N
C
N
364
N
O
N
365
N
O
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
N
N
378
S
C
N
379
N
C
N
380
N
O
N
381
N
C
N
382
N
C
N
383
N
C
N
384
N
O
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
doub
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
doub
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
doub
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
doub
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
doub
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
doub
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
Y
348
N
doub
Y
349
N
sing
Y
350
N
sing
N
351
N
sing
Y
352
N
doub
N
353
N
sing
Y
354
N
doub
N
355
N
sing
Y
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
doub
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
US
Protein Sci.
PRCIEI
0795
0961-8368
20
131
139
10.1002/pro.544
21080423
Structure of Sir2Tm bound to a propionylated peptide.
2011
10.2210/pdb3pdh/pdb
pdb_00003pdh
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
Bent conical Si-mirror (Rh coated)
CCD
2008-04-14
ADSC QUANTUM 315
Bent Ge(111)
SINGLE WAVELENGTH
M
x-ray
1
0.9002
1.0
14-BM-C
APS
0.9002
SYNCHROTRON
APS BEAMLINE 14-BM-C
27569.793
NAD-dependent deacetylase
3.5.1.-
1
man
polymer
2153.547
Cellular tumor antigen p53 18-residue peptide
1
syn
polymer
65.409
ZINC ION
1
syn
non-polymer
18.015
water
247
nat
water
Regulatory protein SIR2 homolog
Antigen NY-CO-13, Phosphoprotein p53, Tumor suppressor p53
no
no
MKMKEFLDLLNESRLTVTLTGAGISTPSGIPDFRGPNGIYKKYSQNVFDIDFFYSHPEEFYRFAKEGIFPMLQAKPNLAH
VLLAKLEEKGLIEAVITQNIDRLHQRAGSKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESSDVPLCDDCNSLIRPNIV
FFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGETPFDDIATLKYNMDVVEFARRVM
EEGGIS
MKMKEFLDLLNESRLTVTLTGAGISTPSGIPDFRGPNGIYKKYSQNVFDIDFFYSHPEEFYRFAKEGIFPMLQAKPNLAH
VLLAKLEEKGLIEAVITQNIDRLHQRAGSKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESSDVPLCDDCNSLIRPNIV
FFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGETPFDDIATLKYNMDVVEFARRVM
EEGGIS
A
polypeptide(L)
no
yes
KKGQSTSRHK(PRK)LMFKTEG
KKGQSTSRHKXLMFKTEG
D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
npdA, Sir2, TM_0490
2336
Thermotoga maritima
562
Escherichia coli
BL21(DE3)
T7 based inducible vector
pET11a
1
2.50
50.79
VAPOR DIFFUSION, HANGING DROP
8.5
Crystals were obtained from 1:1 mix of protein and the well solution (9.5% (w/v) PEG3350, 100 mM CHES buffer), pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2011-01-19
1
1
2011-07-13
1
2
2023-09-06
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Sir2Tm bound to p53 peptide
Sir2Tm bound to acetylated p53 peptide
Ternary complex of Sir2Tm bound to acetylated p53 and NAD+
Sir2Tm bound to deacetylated p53, nicotinamide, and 2'OAADPR from enzymatic turnover in crystal
RCSB
Y
RCSB
2010-10-22
REL
REL
ZN
ZINC ION
HOH
water
Chemically synthesized propionylated p53 peptide
sample
2H4F
PDB
experimental model
ZN
1001
3
ZN
ZN
1001
A
HOH
247
4
HOH
HOH
247
A
HOH
248
4
HOH
HOH
248
A
HOH
249
4
HOH
HOH
249
A
HOH
250
4
HOH
HOH
250
A
HOH
251
4
HOH
HOH
251
A
HOH
252
4
HOH
HOH
252
A
HOH
253
4
HOH
HOH
253
A
HOH
254
4
HOH
HOH
254
A
HOH
255
4
HOH
HOH
255
A
HOH
256
4
HOH
HOH
256
A
HOH
257
4
HOH
HOH
257
A
HOH
258
4
HOH
HOH
258
A
HOH
259
4
HOH
HOH
259
A
HOH
260
4
HOH
HOH
260
A
HOH
261
4
HOH
HOH
261
A
HOH
262
4
HOH
HOH
262
A
HOH
263
4
HOH
HOH
263
A
HOH
264
4
HOH
HOH
264
A
HOH
265
4
HOH
HOH
265
A
HOH
266
4
HOH
HOH
266
A
HOH
267
4
HOH
HOH
267
A
HOH
268
4
HOH
HOH
268
A
HOH
269
4
HOH
HOH
269
A
HOH
270
4
HOH
HOH
270
A
HOH
271
4
HOH
HOH
271
A
HOH
272
4
HOH
HOH
272
A
HOH
273
4
HOH
HOH
273
A
HOH
274
4
HOH
HOH
274
A
HOH
275
4
HOH
HOH
275
A
HOH
276
4
HOH
HOH
276
A
HOH
277
4
HOH
HOH
277
A
HOH
278
4
HOH
HOH
278
A
HOH
279
4
HOH
HOH
279
A
HOH
280
4
HOH
HOH
280
A
HOH
281
4
HOH
HOH
281
A
HOH
282
4
HOH
HOH
282
A
HOH
283
4
HOH
HOH
283
A
HOH
284
4
HOH
HOH
284
A
HOH
285
4
HOH
HOH
285
A
HOH
286
4
HOH
HOH
286
A
HOH
287
4
HOH
HOH
287
A
HOH
288
4
HOH
HOH
288
A
HOH
289
4
HOH
HOH
289
A
HOH
290
4
HOH
HOH
290
A
HOH
291
4
HOH
HOH
291
A
HOH
292
4
HOH
HOH
292
A
HOH
293
4
HOH
HOH
293
A
HOH
294
4
HOH
HOH
294
A
HOH
295
4
HOH
HOH
295
A
HOH
296
4
HOH
HOH
296
A
HOH
297
4
HOH
HOH
297
A
HOH
298
4
HOH
HOH
298
A
HOH
299
4
HOH
HOH
299
A
HOH
300
4
HOH
HOH
300
A
HOH
301
4
HOH
HOH
301
A
HOH
302
4
HOH
HOH
302
A
HOH
303
4
HOH
HOH
303
A
HOH
304
4
HOH
HOH
304
A
HOH
305
4
HOH
HOH
305
A
HOH
306
4
HOH
HOH
306
A
HOH
307
4
HOH
HOH
307
A
HOH
308
4
HOH
HOH
308
A
HOH
309
4
HOH
HOH
309
A
HOH
310
4
HOH
HOH
310
A
HOH
311
4
HOH
HOH
311
A
HOH
312
4
HOH
HOH
312
A
HOH
313
4
HOH
HOH
313
A
HOH
314
4
HOH
HOH
314
A
HOH
315
4
HOH
HOH
315
A
HOH
316
4
HOH
HOH
316
A
HOH
317
4
HOH
HOH
317
A
HOH
318
4
HOH
HOH
318
A
HOH
319
4
HOH
HOH
319
A
HOH
320
4
HOH
HOH
320
A
HOH
321
4
HOH
HOH
321
A
HOH
322
4
HOH
HOH
322
A
HOH
323
4
HOH
HOH
323
A
HOH
324
4
HOH
HOH
324
A
HOH
325
4
HOH
HOH
325
A
HOH
326
4
HOH
HOH
326
A
HOH
327
4
HOH
HOH
327
A
HOH
328
4
HOH
HOH
328
A
HOH
329
4
HOH
HOH
329
A
HOH
330
4
HOH
HOH
330
A
HOH
331
4
HOH
HOH
331
A
HOH
332
4
HOH
HOH
332
A
HOH
333
4
HOH
HOH
333
A
HOH
334
4
HOH
HOH
334
A
HOH
335
4
HOH
HOH
335
A
HOH
336
4
HOH
HOH
336
A
HOH
337
4
HOH
HOH
337
A
HOH
338
4
HOH
HOH
338
A
HOH
339
4
HOH
HOH
339
A
HOH
340
4
HOH
HOH
340
A
HOH
341
4
HOH
HOH
341
A
HOH
342
4
HOH
HOH
342
A
HOH
343
4
HOH
HOH
343
A
HOH
344
4
HOH
HOH
344
A
HOH
345
4
HOH
HOH
345
A
HOH
346
4
HOH
HOH
346
A
HOH
347
4
HOH
HOH
347
A
HOH
348
4
HOH
HOH
348
A
HOH
349
4
HOH
HOH
349
A
HOH
350
4
HOH
HOH
350
A
HOH
351
4
HOH
HOH
351
A
HOH
352
4
HOH
HOH
352
A
HOH
353
4
HOH
HOH
353
A
HOH
354
4
HOH
HOH
354
A
HOH
355
4
HOH
HOH
355
A
HOH
356
4
HOH
HOH
356
A
HOH
357
4
HOH
HOH
357
A
HOH
358
4
HOH
HOH
358
A
HOH
359
4
HOH
HOH
359
A
HOH
360
4
HOH
HOH
360
A
HOH
361
4
HOH
HOH
361
A
HOH
362
4
HOH
HOH
362
A
HOH
363
4
HOH
HOH
363
A
HOH
364
4
HOH
HOH
364
A
HOH
365
4
HOH
HOH
365
A
HOH
366
4
HOH
HOH
366
A
HOH
367
4
HOH
HOH
367
A
HOH
368
4
HOH
HOH
368
A
HOH
369
4
HOH
HOH
369
A
HOH
370
4
HOH
HOH
370
A
HOH
371
4
HOH
HOH
371
A
HOH
372
4
HOH
HOH
372
A
HOH
373
4
HOH
HOH
373
A
HOH
374
4
HOH
HOH
374
A
HOH
375
4
HOH
HOH
375
A
HOH
376
4
HOH
HOH
376
A
HOH
377
4
HOH
HOH
377
A
HOH
378
4
HOH
HOH
378
A
HOH
379
4
HOH
HOH
379
A
HOH
380
4
HOH
HOH
380
A
HOH
381
4
HOH
HOH
381
A
HOH
382
4
HOH
HOH
382
A
HOH
383
4
HOH
HOH
383
A
HOH
384
4
HOH
HOH
384
A
HOH
385
4
HOH
HOH
385
A
HOH
386
4
HOH
HOH
386
A
HOH
387
4
HOH
HOH
387
A
HOH
388
4
HOH
HOH
388
A
HOH
389
4
HOH
HOH
389
A
HOH
390
4
HOH
HOH
390
A
HOH
391
4
HOH
HOH
391
A
HOH
392
4
HOH
HOH
392
A
HOH
393
4
HOH
HOH
393
A
HOH
394
4
HOH
HOH
394
A
HOH
395
4
HOH
HOH
395
A
HOH
396
4
HOH
HOH
396
A
HOH
397
4
HOH
HOH
397
A
HOH
398
4
HOH
HOH
398
A
HOH
399
4
HOH
HOH
399
A
HOH
400
4
HOH
HOH
400
A
HOH
401
4
HOH
HOH
401
A
HOH
402
4
HOH
HOH
402
A
HOH
403
4
HOH
HOH
403
A
HOH
404
4
HOH
HOH
404
A
HOH
405
4
HOH
HOH
405
A
HOH
406
4
HOH
HOH
406
A
HOH
407
4
HOH
HOH
407
A
HOH
408
4
HOH
HOH
408
A
HOH
409
4
HOH
HOH
409
A
HOH
410
4
HOH
HOH
410
A
HOH
411
4
HOH
HOH
411
A
HOH
412
4
HOH
HOH
412
A
HOH
413
4
HOH
HOH
413
A
HOH
414
4
HOH
HOH
414
A
HOH
415
4
HOH
HOH
415
A
HOH
416
4
HOH
HOH
416
A
HOH
417
4
HOH
HOH
417
A
HOH
418
4
HOH
HOH
418
A
HOH
419
4
HOH
HOH
419
A
HOH
420
4
HOH
HOH
420
A
HOH
421
4
HOH
HOH
421
A
HOH
422
4
HOH
HOH
422
A
HOH
423
4
HOH
HOH
423
A
HOH
424
4
HOH
HOH
424
A
HOH
425
4
HOH
HOH
425
A
HOH
426
4
HOH
HOH
426
A
HOH
427
4
HOH
HOH
427
A
HOH
428
4
HOH
HOH
428
A
HOH
429
4
HOH
HOH
429
A
HOH
430
4
HOH
HOH
430
A
HOH
432
4
HOH
HOH
432
A
HOH
433
4
HOH
HOH
433
A
HOH
434
4
HOH
HOH
434
A
HOH
435
4
HOH
HOH
435
A
HOH
436
4
HOH
HOH
436
A
HOH
437
4
HOH
HOH
437
A
HOH
438
4
HOH
HOH
438
A
HOH
439
4
HOH
HOH
439
A
HOH
440
4
HOH
HOH
440
A
HOH
441
4
HOH
HOH
441
A
HOH
442
4
HOH
HOH
442
A
HOH
443
4
HOH
HOH
443
A
HOH
444
4
HOH
HOH
444
A
HOH
445
4
HOH
HOH
445
A
HOH
446
4
HOH
HOH
446
A
HOH
447
4
HOH
HOH
447
A
HOH
448
4
HOH
HOH
448
A
HOH
449
4
HOH
HOH
449
A
HOH
450
4
HOH
HOH
450
A
HOH
451
4
HOH
HOH
451
A
HOH
452
4
HOH
HOH
452
A
HOH
453
4
HOH
HOH
453
A
HOH
454
4
HOH
HOH
454
A
HOH
455
4
HOH
HOH
455
A
HOH
456
4
HOH
HOH
456
A
HOH
457
4
HOH
HOH
457
A
HOH
458
4
HOH
HOH
458
A
HOH
459
4
HOH
HOH
459
A
HOH
460
4
HOH
HOH
460
A
HOH
461
4
HOH
HOH
461
A
HOH
462
4
HOH
HOH
462
A
HOH
463
4
HOH
HOH
463
A
HOH
464
4
HOH
HOH
464
A
HOH
465
4
HOH
HOH
465
A
HOH
466
4
HOH
HOH
466
A
HOH
467
4
HOH
HOH
467
A
HOH
468
4
HOH
HOH
468
A
HOH
469
4
HOH
HOH
469
A
HOH
470
4
HOH
HOH
470
A
HOH
471
4
HOH
HOH
471
A
HOH
472
4
HOH
HOH
472
A
HOH
473
4
HOH
HOH
473
A
HOH
474
4
HOH
HOH
474
A
HOH
475
4
HOH
HOH
475
A
HOH
476
4
HOH
HOH
476
A
HOH
477
4
HOH
HOH
477
A
HOH
478
4
HOH
HOH
478
A
HOH
479
4
HOH
HOH
479
A
HOH
480
4
HOH
HOH
480
A
HOH
481
4
HOH
HOH
481
A
HOH
482
4
HOH
HOH
482
A
HOH
483
4
HOH
HOH
483
A
HOH
484
4
HOH
HOH
484
A
HOH
485
4
HOH
HOH
485
A
HOH
25
4
HOH
HOH
25
D
HOH
45
4
HOH
HOH
45
D
HOH
62
4
HOH
HOH
62
D
HOH
83
4
HOH
HOH
83
D
HOH
86
4
HOH
HOH
86
D
HOH
87
4
HOH
HOH
87
D
HOH
106
4
HOH
HOH
106
D
HOH
221
4
HOH
HOH
221
D
HOH
242
4
HOH
HOH
242
D
MET
1
n
1
MET
1
A
LYS
2
n
2
LYS
2
A
MET
3
n
3
MET
3
A
LYS
4
n
4
LYS
4
A
GLU
5
n
5
GLU
5
A
PHE
6
n
6
PHE
6
A
LEU
7
n
7
LEU
7
A
ASP
8
n
8
ASP
8
A
LEU
9
n
9
LEU
9
A
LEU
10
n
10
LEU
10
A
ASN
11
n
11
ASN
11
A
GLU
12
n
12
GLU
12
A
SER
13
n
13
SER
13
A
ARG
14
n
14
ARG
14
A
LEU
15
n
15
LEU
15
A
THR
16
n
16
THR
16
A
VAL
17
n
17
VAL
17
A
THR
18
n
18
THR
18
A
LEU
19
n
19
LEU
19
A
THR
20
n
20
THR
20
A
GLY
21
n
21
GLY
21
A
ALA
22
n
22
ALA
22
A
GLY
23
n
23
GLY
23
A
ILE
24
n
24
ILE
24
A
SER
25
n
25
SER
25
A
THR
26
n
26
THR
26
A
PRO
27
n
27
PRO
27
A
SER
28
n
28
SER
28
A
GLY
29
n
29
GLY
29
A
ILE
30
n
30
ILE
30
A
PRO
31
n
31
PRO
31
A
ASP
32
n
32
ASP
32
A
PHE
33
n
33
PHE
33
A
n
34
34
A
n
35
35
A
n
36
36
A
n
37
37
A
n
38
38
A
n
39
39
A
n
40
40
A
n
41
41
A
n
42
42
A
TYR
43
n
43
TYR
43
A
SER
44
n
44
SER
44
A
GLN
45
n
45
GLN
45
A
ASN
46
n
46
ASN
46
A
VAL
47
n
47
VAL
47
A
PHE
48
n
48
PHE
48
A
ASP
49
n
49
ASP
49
A
ILE
50
n
50
ILE
50
A
ASP
51
n
51
ASP
51
A
PHE
52
n
52
PHE
52
A
PHE
53
n
53
PHE
53
A
TYR
54
n
54
TYR
54
A
SER
55
n
55
SER
55
A
HIS
56
n
56
HIS
56
A
PRO
57
n
57
PRO
57
A
GLU
58
n
58
GLU
58
A
GLU
59
n
59
GLU
59
A
PHE
60
n
60
PHE
60
A
TYR
61
n
61
TYR
61
A
ARG
62
n
62
ARG
62
A
PHE
63
n
63
PHE
63
A
ALA
64
n
64
ALA
64
A
LYS
65
n
65
LYS
65
A
GLU
66
n
66
GLU
66
A
GLY
67
n
67
GLY
67
A
ILE
68
n
68
ILE
68
A
PHE
69
n
69
PHE
69
A
PRO
70
n
70
PRO
70
A
MET
71
n
71
MET
71
A
LEU
72
n
72
LEU
72
A
GLN
73
n
73
GLN
73
A
ALA
74
n
74
ALA
74
A
LYS
75
n
75
LYS
75
A
PRO
76
n
76
PRO
76
A
ASN
77
n
77
ASN
77
A
LEU
78
n
78
LEU
78
A
ALA
79
n
79
ALA
79
A
HIS
80
n
80
HIS
80
A
VAL
81
n
81
VAL
81
A
LEU
82
n
82
LEU
82
A
LEU
83
n
83
LEU
83
A
ALA
84
n
84
ALA
84
A
LYS
85
n
85
LYS
85
A
LEU
86
n
86
LEU
86
A
GLU
87
n
87
GLU
87
A
GLU
88
n
88
GLU
88
A
LYS
89
n
89
LYS
89
A
GLY
90
n
90
GLY
90
A
LEU
91
n
91
LEU
91
A
ILE
92
n
92
ILE
92
A
GLU
93
n
93
GLU
93
A
ALA
94
n
94
ALA
94
A
VAL
95
n
95
VAL
95
A
ILE
96
n
96
ILE
96
A
THR
97
n
97
THR
97
A
GLN
98
n
98
GLN
98
A
ASN
99
n
99
ASN
99
A
ILE
100
n
100
ILE
100
A
ASP
101
n
101
ASP
101
A
ARG
102
n
102
ARG
102
A
LEU
103
n
103
LEU
103
A
HIS
104
n
104
HIS
104
A
GLN
105
n
105
GLN
105
A
ARG
106
n
106
ARG
106
A
ALA
107
n
107
ALA
107
A
GLY
108
n
108
GLY
108
A
SER
109
n
109
SER
109
A
LYS
110
n
110
LYS
110
A
LYS
111
n
111
LYS
111
A
VAL
112
n
112
VAL
112
A
ILE
113
n
113
ILE
113
A
GLU
114
n
114
GLU
114
A
LEU
115
n
115
LEU
115
A
HIS
116
n
116
HIS
116
A
GLY
117
n
117
GLY
117
A
ASN
118
n
118
ASN
118
A
VAL
119
n
119
VAL
119
A
GLU
120
n
120
GLU
120
A
GLU
121
n
121
GLU
121
A
TYR
122
n
122
TYR
122
A
TYR
123
n
123
TYR
123
A
CYS
124
n
124
CYS
124
A
VAL
125
n
125
VAL
125
A
ARG
126
n
126
ARG
126
A
CYS
127
n
127
CYS
127
A
GLU
128
n
128
GLU
128
A
LYS
129
n
129
LYS
129
A
LYS
130
n
130
LYS
130
A
TYR
131
n
131
TYR
131
A
THR
132
n
132
THR
132
A
VAL
133
n
133
VAL
133
A
GLU
134
n
134
GLU
134
A
ASP
135
n
135
ASP
135
A
VAL
136
n
136
VAL
136
A
ILE
137
n
137
ILE
137
A
LYS
138
n
138
LYS
138
A
LYS
139
n
139
LYS
139
A
LEU
140
n
140
LEU
140
A
GLU
141
n
141
GLU
141
A
SER
142
n
142
SER
142
A
SER
143
n
143
SER
143
A
ASP
144
n
144
ASP
144
A
VAL
145
n
145
VAL
145
A
PRO
146
n
146
PRO
146
A
LEU
147
n
147
LEU
147
A
CYS
148
n
148
CYS
148
A
ASP
149
n
149
ASP
149
A
ASP
150
n
150
ASP
150
A
CYS
151
n
151
CYS
151
A
ASN
152
n
152
ASN
152
A
SER
153
n
153
SER
153
A
LEU
154
n
154
LEU
154
A
ILE
155
n
155
ILE
155
A
ARG
156
n
156
ARG
156
A
PRO
157
n
157
PRO
157
A
ASN
158
n
158
ASN
158
A
ILE
159
n
159
ILE
159
A
VAL
160
n
160
VAL
160
A
PHE
161
n
161
PHE
161
A
PHE
162
n
162
PHE
162
A
GLY
163
n
163
GLY
163
A
GLU
164
n
164
GLU
164
A
ASN
165
n
165
ASN
165
A
LEU
166
n
166
LEU
166
A
PRO
167
n
167
PRO
167
A
GLN
168
n
168
GLN
168
A
ASP
169
n
169
ASP
169
A
ALA
170
n
170
ALA
170
A
LEU
171
n
171
LEU
171
A
ARG
172
n
172
ARG
172
A
GLU
173
n
173
GLU
173
A
ALA
174
n
174
ALA
174
A
ILE
175
n
175
ILE
175
A
GLY
176
n
176
GLY
176
A
LEU
177
n
177
LEU
177
A
SER
178
n
178
SER
178
A
SER
179
n
179
SER
179
A
ARG
180
n
180
ARG
180
A
ALA
181
n
181
ALA
181
A
SER
182
n
182
SER
182
A
LEU
183
n
183
LEU
183
A
MET
184
n
184
MET
184
A
ILE
185
n
185
ILE
185
A
VAL
186
n
186
VAL
186
A
LEU
187
n
187
LEU
187
A
GLY
188
n
188
GLY
188
A
SER
189
n
189
SER
189
A
SER
190
n
190
SER
190
A
LEU
191
n
191
LEU
191
A
VAL
192
n
192
VAL
192
A
VAL
193
n
193
VAL
193
A
TYR
194
n
194
TYR
194
A
PRO
195
n
195
PRO
195
A
ALA
196
n
196
ALA
196
A
ALA
197
n
197
ALA
197
A
GLU
198
n
198
GLU
198
A
LEU
199
n
199
LEU
199
A
PRO
200
n
200
PRO
200
A
LEU
201
n
201
LEU
201
A
ILE
202
n
202
ILE
202
A
THR
203
n
203
THR
203
A
VAL
204
n
204
VAL
204
A
ARG
205
n
205
ARG
205
A
SER
206
n
206
SER
206
A
GLY
207
n
207
GLY
207
A
GLY
208
n
208
GLY
208
A
LYS
209
n
209
LYS
209
A
LEU
210
n
210
LEU
210
A
VAL
211
n
211
VAL
211
A
ILE
212
n
212
ILE
212
A
VAL
213
n
213
VAL
213
A
ASN
214
n
214
ASN
214
A
LEU
215
n
215
LEU
215
A
GLY
216
n
216
GLY
216
A
GLU
217
n
217
GLU
217
A
THR
218
n
218
THR
218
A
PRO
219
n
219
PRO
219
A
PHE
220
n
220
PHE
220
A
ASP
221
n
221
ASP
221
A
ASP
222
n
222
ASP
222
A
ILE
223
n
223
ILE
223
A
ALA
224
n
224
ALA
224
A
THR
225
n
225
THR
225
A
LEU
226
n
226
LEU
226
A
LYS
227
n
227
LYS
227
A
TYR
228
n
228
TYR
228
A
ASN
229
n
229
ASN
229
A
MET
230
n
230
MET
230
A
ASP
231
n
231
ASP
231
A
VAL
232
n
232
VAL
232
A
VAL
233
n
233
VAL
233
A
GLU
234
n
234
GLU
234
A
PHE
235
n
235
PHE
235
A
ALA
236
n
236
ALA
236
A
ARG
237
n
237
ARG
237
A
ARG
238
n
238
ARG
238
A
VAL
239
n
239
VAL
239
A
MET
240
n
240
MET
240
A
GLU
241
n
241
GLU
241
A
GLU
242
n
242
GLU
242
A
GLY
243
n
243
GLY
243
A
GLY
244
n
244
GLY
244
A
ILE
245
n
245
ILE
245
A
SER
246
n
246
SER
246
A
n
1
1
D
LYS
2
n
2
LYS
2
D
GLY
3
n
3
GLY
3
D
GLN
4
n
4
GLN
4
D
SER
5
n
5
SER
5
D
THR
6
n
6
THR
6
D
SER
7
n
7
SER
7
D
ARG
8
n
8
ARG
8
D
HIS
9
n
9
HIS
9
D
LYS
10
n
10
LYS
10
D
PRK
11
n
11
PRK
11
D
LEU
12
n
12
LEU
12
D
MET
13
n
13
MET
13
D
PHE
14
n
14
PHE
14
D
n
15
15
D
n
16
16
D
n
17
17
D
n
18
18
D
1.6918
-0.4190
1.7289
3.3626
1.2053
5.6811
-0.0871
0.0828
0.1569
-0.2668
-0.0020
-0.0493
-0.4401
0.2530
0.0891
0.1278
-0.0109
0.0023
0.0414
-0.0179
0.0637
refined
-4.5950
36.5570
14.3820
X-RAY DIFFRACTION
1.6503
-0.4182
-0.0570
1.6750
-0.2661
2.6340
-0.0281
0.0073
-0.1013
0.0078
-0.0086
-0.0400
0.1435
0.0092
0.0367
0.0192
-0.0093
-0.0002
0.0232
-0.0023
0.0409
refined
2.8360
9.5270
10.2360
X-RAY DIFFRACTION
4.2001
0.2941
-1.5811
9.1463
1.7384
26.8497
-0.3090
-0.8774
-0.2533
1.0673
0.1701
-0.3801
1.1522
1.0653
0.1389
0.3025
0.1222
-0.0316
0.2165
0.0380
0.1460
refined
4.8400
21.3310
29.9140
X-RAY DIFFRACTION
A
43
A
74
X-RAY DIFFRACTION
1
A
119
A
163
X-RAY DIFFRACTION
1
A
1
A
33
X-RAY DIFFRACTION
2
A
76
A
117
X-RAY DIFFRACTION
2
A
165
A
246
X-RAY DIFFRACTION
2
D
2
D
14
X-RAY DIFFRACTION
3
author_and_software_defined_assembly
PISA
2
dimeric
1130
-3
12180
A
CYS
124
A
SG
CYS
124
1_555
A
ZN
1001
C
ZN
ZN
1_555
A
CYS
127
A
SG
CYS
127
1_555
108.0
A
CYS
124
A
SG
CYS
124
1_555
A
ZN
1001
C
ZN
ZN
1_555
A
CYS
148
A
SG
CYS
148
1_555
106.9
A
CYS
127
A
SG
CYS
127
1_555
A
ZN
1001
C
ZN
ZN
1_555
A
CYS
148
A
SG
CYS
148
1_555
105.5
A
CYS
124
A
SG
CYS
124
1_555
A
ZN
1001
C
ZN
ZN
1_555
A
CYS
151
A
SG
CYS
151
1_555
96.5
A
CYS
127
A
SG
CYS
127
1_555
A
ZN
1001
C
ZN
ZN
1_555
A
CYS
151
A
SG
CYS
151
1_555
121.4
A
CYS
148
A
SG
CYS
148
1_555
A
ZN
1001
C
ZN
ZN
1_555
A
CYS
151
A
SG
CYS
151
1_555
117.1
D
PRK
11
N~6~-PROPANOYL-L-LYSINE
B
PRK
11
LYS
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ILE
113
A
O
ILE
113
A
N
VAL
95
A
N
VAL
95
A
O
ILE
96
A
O
ILE
96
A
N
THR
18
A
N
THR
18
A
N
LEU
19
A
N
LEU
19
A
O
LEU
187
A
O
LEU
187
A
N
VAL
186
A
N
VAL
186
A
O
VAL
211
A
O
VAL
211
A
N
ILE
212
A
N
ILE
212
A
O
TYR
228
A
O
TYR
228
A
O
TYR
131
A
O
TYR
131
A
N
TYR
122
A
N
TYR
122
A
N
GLU
121
A
N
GLU
121
A
O
ASN
158
A
O
ASN
158
A
N
TYR
194
A
N
TYR
194
D
O
LEU
12
B
O
LEU
12
1
A
CG
PHE
33
A
CG
PHE
33
1
Y
1
A
CD1
PHE
33
A
CD1
PHE
33
1
Y
1
A
CD2
PHE
33
A
CD2
PHE
33
1
Y
1
A
CE1
PHE
33
A
CE1
PHE
33
1
Y
1
A
CE2
PHE
33
A
CE2
PHE
33
1
Y
1
A
CZ
PHE
33
A
CZ
PHE
33
1
Y
1
A
CG
GLN
45
A
CG
GLN
45
1
Y
1
A
CD
GLN
45
A
CD
GLN
45
1
Y
1
A
OE1
GLN
45
A
OE1
GLN
45
1
Y
1
A
NE2
GLN
45
A
NE2
GLN
45
1
Y
1
A
CZ
ARG
62
A
CZ
ARG
62
1
Y
1
A
NH1
ARG
62
A
NH1
ARG
62
1
Y
1
A
NH2
ARG
62
A
NH2
ARG
62
1
Y
1
A
CG
GLU
66
A
CG
GLU
66
1
Y
1
A
CD
GLU
66
A
CD
GLU
66
1
Y
1
A
OE1
GLU
66
A
OE1
GLU
66
1
Y
1
A
OE2
GLU
66
A
OE2
GLU
66
1
Y
1
A
ARG
34
A
ARG
34
1
Y
1
A
GLY
35
A
GLY
35
1
Y
1
A
PRO
36
A
PRO
36
1
Y
1
A
ASN
37
A
ASN
37
1
Y
1
A
GLY
38
A
GLY
38
1
Y
1
A
ILE
39
A
ILE
39
1
Y
1
A
TYR
40
A
TYR
40
1
Y
1
A
LYS
41
A
LYS
41
1
Y
1
A
LYS
42
A
LYS
42
1
Y
1
D
LYS
1
B
LYS
1
1
Y
1
D
LYS
15
B
LYS
15
1
Y
1
D
THR
16
B
THR
16
1
Y
1
D
GLU
17
B
GLU
17
1
Y
1
D
GLY
18
B
GLY
18
1
Y
1
A
A
MET
LYS
1
2
141.33
1
A
A
OE1
O
GLU
HOH
241
394
1.91
A
1_555
4_555
1
A
GLN
45
82.67
-48.92
1
A
ILE
68
-122.58
-56.97
16.398
0.63
0.00
-0.00
0.21
0.00
-0.84
0.961
0.937
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.21010
0.16493
0.16715
1.80
30.01
1430
28402
26911
5.0
99.82
4.722
0.071
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.109
0.112
0.80
0.80
1.40
2H4F
MAXIMUM LIKELIHOOD
MASK
1.80
30.01
247
2206
1
0
1958
0.020
0.022
2092
0.001
0.020
1470
1.612
1.989
2839
0.951
3.000
3616
6.757
5.000
274
34.892
24.301
93
13.696
15.012
402
20.086
15.000
14
0.115
0.200
325
0.009
0.021
2306
0.001
0.020
408
1.190
1.500
1285
0.443
1.500
517
1.828
2.000
2094
2.869
3.000
807
4.117
4.500
731
0.282
0.235
1.846
104
1931
20
98.74
1.80
30.01
3PDH
28402
28346
2.0
2.0
0.099
1
23.8
7.0
99.82
0.639
1.80
1.85
2.9
6.5
99.3
data collection
ADSC
Quantum
phasing
MOLREP
refinement
REFMAC
5.5.0109
data reduction
HKL-2000
data scaling
HKL-2000
Structure of Sir2Tm bound to a propionylated peptide
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
A
MET
3
A
MET
3
HELX_P
A
SER
13
A
SER
13
1
1
11
A
GLY
21
A
GLY
21
HELX_P
A
THR
26
A
THR
26
1
2
6
A
PRO
27
A
PRO
27
HELX_P
A
GLY
29
A
GLY
29
5
3
3
A
ASP
49
A
ASP
49
HELX_P
A
HIS
56
A
HIS
56
1
4
8
A
HIS
56
A
HIS
56
HELX_P
A
ILE
68
A
ILE
68
1
5
13
A
PHE
69
A
PHE
69
HELX_P
A
ALA
74
A
ALA
74
5
6
6
A
ASN
77
A
ASN
77
HELX_P
A
LYS
89
A
LYS
89
1
7
13
A
ARG
102
A
ARG
102
HELX_P
A
ALA
107
A
ALA
107
1
8
6
A
VAL
133
A
VAL
133
HELX_P
A
GLU
141
A
GLU
141
1
9
9
A
PRO
167
A
PRO
167
HELX_P
A
ALA
181
A
ALA
181
1
10
15
A
PRO
195
A
PRO
195
HELX_P
A
ALA
197
A
ALA
197
5
11
3
A
GLU
198
A
GLU
198
HELX_P
A
GLY
207
A
GLY
207
1
12
10
A
PHE
220
A
PHE
220
HELX_P
A
ALA
224
A
ALA
224
5
13
5
A
ASP
231
A
ASP
231
HELX_P
A
GLY
244
A
GLY
244
1
14
14
D
GLY
3
B
GLY
3
HELX_P
D
LYS
10
B
LYS
10
5
15
8
covale
1.335
both
D
LYS
10
B
C
LYS
10
1_555
D
PRK
11
B
N
PRK
11
1_555
covale
1.327
both
D
PRK
11
B
C
PRK
11
1_555
D
LEU
12
B
N
LEU
12
1_555
metalc
2.395
A
CYS
124
A
SG
CYS
124
1_555
A
ZN
1001
C
ZN
ZN
1_555
metalc
2.171
A
CYS
127
A
SG
CYS
127
1_555
A
ZN
1001
C
ZN
ZN
1_555
metalc
2.308
A
CYS
148
A
SG
CYS
148
1_555
A
ZN
1001
C
ZN
ZN
1_555
metalc
2.326
A
CYS
151
A
SG
CYS
151
1_555
A
ZN
1001
C
ZN
ZN
1_555
HYDROLASE
Rossmann fold, deacetylase, deacylase, depropionylase, N6-propionyl-lysine, HYDROLASE
A
ASP
32
A
ASP
32
1
A
PHE
33
A
PHE
33
29.93
A
TYR
194
A
TYR
194
1
A
PRO
195
A
PRO
195
2.38
NPD_THEMA
UNP
1
1
Q9WYW0
MKMKEFLDLLNESRLTVTLTGAGISTPSGIPDFRGPNGIYKKYSQNVFDIDFFYSHPEEFYRFAKEGIFPMLQAKPNLAH
VLLAKLEEKGLIEAVITQNIDRLHQRAGSKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESSDVPLCDDCNSLIRPNIV
FFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGETPFDDIATLKYNMDVVEFARRVM
EEGGIS
P53_HUMAN
UNP
2
372
P04637
KKGQSTSRHKKLMFKTEG
1
246
3PDH
1
246
Q9WYW0
A
1
1
246
372
389
3PDH
1
18
P04637
D
2
1
18
6
3
2
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
112
A
VAL
112
A
GLU
114
A
GLU
114
A
ALA
94
A
ALA
94
A
THR
97
A
THR
97
A
THR
16
A
THR
16
A
THR
20
A
THR
20
A
LEU
183
A
LEU
183
A
LEU
187
A
LEU
187
A
LYS
209
A
LYS
209
A
VAL
213
A
VAL
213
A
LEU
226
A
LEU
226
A
TYR
228
A
TYR
228
A
LYS
130
A
LYS
130
A
THR
132
A
THR
132
A
GLY
117
A
GLY
117
A
CYS
124
A
CYS
124
A
ILE
155
A
ILE
155
A
ILE
159
A
ILE
159
A
VAL
193
A
VAL
193
A
TYR
194
A
TYR
194
D
LEU
12
B
LEU
12
D
MET
13
B
MET
13
BINDING SITE FOR RESIDUE ZN A 1001
A
ZN
1001
Software
4
A
CYS
124
A
CYS
124
4
1_555
A
CYS
127
A
CYS
127
4
1_555
A
CYS
148
A
CYS
148
4
1_555
A
CYS
151
A
CYS
151
4
1_555
19
P 21 21 21