0.025913
0.000000
0.000000
0.000000
0.016474
0.000000
0.000000
0.000000
0.004875
0.00000
0.00000
0.00000
Joint Center for Structural Genomics (JCSG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.000
90.000
90.000
38.590
60.700
205.110
C2 H3 O2 -1
59.044
ACETATE ION
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cl -1
35.453
CHLORIDE ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C8 H18 O5
194.226
TETRAETHYLENE GLYCOL
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be published
0353
Crystal structure of a putative adhesin (BF0245) from Bacteroides fragilis NCTC 9343 at 2.07 A resolution
10.2210/pdb3pet/pdb
pdb_00003pet
100
1
100
2
CCD
2010-07-22
MARMOSAIC 325 mm CCD
CCD
2010-04-08
MARMOSAIC 325 mm CCD
Double crystal monochromator
MAD
M
x-ray
1
Single crystal Si(111) bent monochromator (horizontal focusing)
MAD
M
x-ray
2
0.97893
1.0
0.97954
1.0
0.91837
1.0
0.97917
1.0
BL9-2
SSRL
0.97893
SYNCHROTRON
SSRL BEAMLINE BL9-2
BL11-1
SSRL
0.97954, 0.91837, 0.97917
SYNCHROTRON
SSRL BEAMLINE BL11-1
23451.369
Putative adhesin
sequence database residues 25-244
2
man
polymer
35.453
CHLORIDE ION
2
syn
non-polymer
59.044
ACETATE ION
2
syn
non-polymer
194.226
TETRAETHYLENE GLYCOL
14
syn
non-polymer
18.015
water
304
nat
water
Putative lipoprotein
no
yes
GGEGIQPSKKLITRDYKVKEFNKIDAGTVGNIYYTQSTDGKTDLQIYGPDNIVALIQVAVKDNTLFLSIDKSKKVRNFKK
(MSE)KITITSPTLNGISFKGVGDVHIENGLTTDNLDIESKGVGNVDIQSLTCQKLNVQS(MSE)GVGDVKLEGTAQIAA
LHSKGVGNIEAGNLRANAVEASSQGVGDITCNATESIDAAVRGVGSIKYKGSPTIKSLSKKGVGTIKNI
GGEGIQPSKKLITRDYKVKEFNKIDAGTVGNIYYTQSTDGKTDLQIYGPDNIVALIQVAVKDNTLFLSIDKSKKVRNFKK
MKITITSPTLNGISFKGVGDVHIENGLTTDNLDIESKGVGNVDIQSLTCQKLNVQSMGVGDVKLEGTAQIAALHSKGVGN
IEAGNLRANAVEASSQGVGDITCNATESIDAAVRGVGSIKYKGSPTIKSLSKKGVGTIKNI
A,B
386554
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
ATCC 25285 / NCTC 9343
sample
BF0202
272559
Bacteroides fragilis NCTC 9343
562
Escherichia Coli
HK100
Plasmid
SpeedET
2
2.56
51.97
DATA WERE SCALED USING XSCALE WITH FRIEDEL PAIRS KEPT AS SEPARATE WHEN COMPUTING R-SYM, COMPLETENESS AND <I/SIGMA(I)>
VAPOR DIFFUSION, SITTING DROP
3.85
0.20M sodium chloride, 31.8% polyethylene glycol 300, 0.1M sodium acetate pH 3.85, NANODROP, temperature 293K, VAPOR DIFFUSION, SITTING DROP
293
VAPOR DIFFUSION, SITTING DROP
4.5
GNF2 E12: 0.20M sodium chloride, 40.0% polyethylene glycol 300, 0.1M sodium acetate pH 4.5, NANODROP, temperature 277K, VAPOR DIFFUSION, SITTING DROP
277
Joint Center for Structural Genomics
JCSG
PSI:Biology
database_2
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Structure summary
Database references
Derived calculations
1
0
2011-02-09
1
1
2011-07-13
1
2
2011-07-20
1
3
2023-02-01
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
RCSB
Y
RCSB
2010-10-27
REL
REL
CL
CHLORIDE ION
ACT
ACETATE ION
PG4
TETRAETHYLENE GLYCOL
HOH
water
THE CONSTRUCT (RESIDUES 25-244) WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE.
CL
246
2
CL
CL
246
A
ACT
247
3
ACT
ACT
247
A
PG4
249
4
PG4
PG4
249
A
PG4
251
4
PG4
PG4
251
A
PG4
254
4
PG4
PG4
254
A
PG4
255
4
PG4
PG4
255
A
PG4
256
4
PG4
PG4
256
A
PG4
260
4
PG4
PG4
260
A
PG4
261
4
PG4
PG4
261
A
PG4
262
4
PG4
PG4
262
A
CL
245
2
CL
CL
245
B
ACT
248
3
ACT
ACT
248
B
PG4
250
4
PG4
PG4
250
B
PG4
252
4
PG4
PG4
252
B
PG4
253
4
PG4
PG4
253
B
PG4
257
4
PG4
PG4
257
B
PG4
258
4
PG4
PG4
258
B
PG4
259
4
PG4
PG4
259
B
HOH
263
5
HOH
HOH
263
A
HOH
264
5
HOH
HOH
264
A
HOH
267
5
HOH
HOH
267
A
HOH
271
5
HOH
HOH
271
A
HOH
272
5
HOH
HOH
272
A
HOH
274
5
HOH
HOH
274
A
HOH
277
5
HOH
HOH
277
A
HOH
280
5
HOH
HOH
280
A
HOH
283
5
HOH
HOH
283
A
HOH
286
5
HOH
HOH
286
A
HOH
288
5
HOH
HOH
288
A
HOH
290
5
HOH
HOH
290
A
HOH
291
5
HOH
HOH
291
A
HOH
293
5
HOH
HOH
293
A
HOH
294
5
HOH
HOH
294
A
HOH
298
5
HOH
HOH
298
A
HOH
299
5
HOH
HOH
299
A
HOH
300
5
HOH
HOH
300
A
HOH
302
5
HOH
HOH
302
A
HOH
306
5
HOH
HOH
306
A
HOH
307
5
HOH
HOH
307
A
HOH
310
5
HOH
HOH
310
A
HOH
311
5
HOH
HOH
311
A
HOH
313
5
HOH
HOH
313
A
HOH
314
5
HOH
HOH
314
A
HOH
318
5
HOH
HOH
318
A
HOH
319
5
HOH
HOH
319
A
HOH
321
5
HOH
HOH
321
A
HOH
322
5
HOH
HOH
322
A
HOH
323
5
HOH
HOH
323
A
HOH
327
5
HOH
HOH
327
A
HOH
331
5
HOH
HOH
331
A
HOH
333
5
HOH
HOH
333
A
HOH
334
5
HOH
HOH
334
A
HOH
335
5
HOH
HOH
335
A
HOH
336
5
HOH
HOH
336
A
HOH
337
5
HOH
HOH
337
A
HOH
338
5
HOH
HOH
338
A
HOH
340
5
HOH
HOH
340
A
HOH
342
5
HOH
HOH
342
A
HOH
344
5
HOH
HOH
344
A
HOH
346
5
HOH
HOH
346
A
HOH
348
5
HOH
HOH
348
A
HOH
349
5
HOH
HOH
349
A
HOH
353
5
HOH
HOH
353
A
HOH
356
5
HOH
HOH
356
A
HOH
357
5
HOH
HOH
357
A
HOH
359
5
HOH
HOH
359
A
HOH
361
5
HOH
HOH
361
A
HOH
363
5
HOH
HOH
363
A
HOH
364
5
HOH
HOH
364
A
HOH
368
5
HOH
HOH
368
A
HOH
369
5
HOH
HOH
369
A
HOH
370
5
HOH
HOH
370
A
HOH
372
5
HOH
HOH
372
A
HOH
374
5
HOH
HOH
374
A
HOH
375
5
HOH
HOH
375
A
HOH
376
5
HOH
HOH
376
A
HOH
378
5
HOH
HOH
378
A
HOH
379
5
HOH
HOH
379
A
HOH
380
5
HOH
HOH
380
A
HOH
381
5
HOH
HOH
381
A
HOH
383
5
HOH
HOH
383
A
HOH
385
5
HOH
HOH
385
A
HOH
386
5
HOH
HOH
386
A
HOH
387
5
HOH
HOH
387
A
HOH
389
5
HOH
HOH
389
A
HOH
390
5
HOH
HOH
390
A
HOH
391
5
HOH
HOH
391
A
HOH
392
5
HOH
HOH
392
A
HOH
394
5
HOH
HOH
394
A
HOH
395
5
HOH
HOH
395
A
HOH
397
5
HOH
HOH
397
A
HOH
399
5
HOH
HOH
399
A
HOH
400
5
HOH
HOH
400
A
HOH
402
5
HOH
HOH
402
A
HOH
404
5
HOH
HOH
404
A
HOH
406
5
HOH
HOH
406
A
HOH
408
5
HOH
HOH
408
A
HOH
411
5
HOH
HOH
411
A
HOH
412
5
HOH
HOH
412
A
HOH
415
5
HOH
HOH
415
A
HOH
417
5
HOH
HOH
417
A
HOH
418
5
HOH
HOH
418
A
HOH
420
5
HOH
HOH
420
A
HOH
421
5
HOH
HOH
421
A
HOH
424
5
HOH
HOH
424
A
HOH
429
5
HOH
HOH
429
A
HOH
432
5
HOH
HOH
432
A
HOH
435
5
HOH
HOH
435
A
HOH
437
5
HOH
HOH
437
A
HOH
438
5
HOH
HOH
438
A
HOH
440
5
HOH
HOH
440
A
HOH
441
5
HOH
HOH
441
A
HOH
443
5
HOH
HOH
443
A
HOH
445
5
HOH
HOH
445
A
HOH
447
5
HOH
HOH
447
A
HOH
448
5
HOH
HOH
448
A
HOH
452
5
HOH
HOH
452
A
HOH
454
5
HOH
HOH
454
A
HOH
456
5
HOH
HOH
456
A
HOH
460
5
HOH
HOH
460
A
HOH
464
5
HOH
HOH
464
A
HOH
466
5
HOH
HOH
466
A
HOH
467
5
HOH
HOH
467
A
HOH
470
5
HOH
HOH
470
A
HOH
471
5
HOH
HOH
471
A
HOH
472
5
HOH
HOH
472
A
HOH
474
5
HOH
HOH
474
A
HOH
475
5
HOH
HOH
475
A
HOH
476
5
HOH
HOH
476
A
HOH
477
5
HOH
HOH
477
A
HOH
479
5
HOH
HOH
479
A
HOH
480
5
HOH
HOH
480
A
HOH
482
5
HOH
HOH
482
A
HOH
486
5
HOH
HOH
486
A
HOH
487
5
HOH
HOH
487
A
HOH
489
5
HOH
HOH
489
A
HOH
492
5
HOH
HOH
492
A
HOH
497
5
HOH
HOH
497
A
HOH
498
5
HOH
HOH
498
A
HOH
499
5
HOH
HOH
499
A
HOH
503
5
HOH
HOH
503
A
HOH
504
5
HOH
HOH
504
A
HOH
505
5
HOH
HOH
505
A
HOH
508
5
HOH
HOH
508
A
HOH
509
5
HOH
HOH
509
A
HOH
510
5
HOH
HOH
510
A
HOH
511
5
HOH
HOH
511
A
HOH
512
5
HOH
HOH
512
A
HOH
515
5
HOH
HOH
515
A
HOH
517
5
HOH
HOH
517
A
HOH
519
5
HOH
HOH
519
A
HOH
521
5
HOH
HOH
521
A
HOH
527
5
HOH
HOH
527
A
HOH
530
5
HOH
HOH
530
A
HOH
531
5
HOH
HOH
531
A
HOH
532
5
HOH
HOH
532
A
HOH
535
5
HOH
HOH
535
A
HOH
537
5
HOH
HOH
537
A
HOH
538
5
HOH
HOH
538
A
HOH
544
5
HOH
HOH
544
A
HOH
547
5
HOH
HOH
547
A
HOH
548
5
HOH
HOH
548
A
HOH
549
5
HOH
HOH
549
A
HOH
550
5
HOH
HOH
550
A
HOH
551
5
HOH
HOH
551
A
HOH
552
5
HOH
HOH
552
A
HOH
553
5
HOH
HOH
553
A
HOH
563
5
HOH
HOH
563
A
HOH
564
5
HOH
HOH
564
A
HOH
565
5
HOH
HOH
565
A
HOH
265
5
HOH
HOH
265
B
HOH
266
5
HOH
HOH
266
B
HOH
268
5
HOH
HOH
268
B
HOH
269
5
HOH
HOH
269
B
HOH
270
5
HOH
HOH
270
B
HOH
273
5
HOH
HOH
273
B
HOH
275
5
HOH
HOH
275
B
HOH
276
5
HOH
HOH
276
B
HOH
278
5
HOH
HOH
278
B
HOH
279
5
HOH
HOH
279
B
HOH
281
5
HOH
HOH
281
B
HOH
282
5
HOH
HOH
282
B
HOH
284
5
HOH
HOH
284
B
HOH
285
5
HOH
HOH
285
B
HOH
287
5
HOH
HOH
287
B
HOH
289
5
HOH
HOH
289
B
HOH
292
5
HOH
HOH
292
B
HOH
295
5
HOH
HOH
295
B
HOH
296
5
HOH
HOH
296
B
HOH
297
5
HOH
HOH
297
B
HOH
301
5
HOH
HOH
301
B
HOH
303
5
HOH
HOH
303
B
HOH
304
5
HOH
HOH
304
B
HOH
305
5
HOH
HOH
305
B
HOH
308
5
HOH
HOH
308
B
HOH
309
5
HOH
HOH
309
B
HOH
312
5
HOH
HOH
312
B
HOH
315
5
HOH
HOH
315
B
HOH
316
5
HOH
HOH
316
B
HOH
317
5
HOH
HOH
317
B
HOH
320
5
HOH
HOH
320
B
HOH
324
5
HOH
HOH
324
B
HOH
325
5
HOH
HOH
325
B
HOH
326
5
HOH
HOH
326
B
HOH
328
5
HOH
HOH
328
B
HOH
329
5
HOH
HOH
329
B
HOH
330
5
HOH
HOH
330
B
HOH
332
5
HOH
HOH
332
B
HOH
339
5
HOH
HOH
339
B
HOH
341
5
HOH
HOH
341
B
HOH
343
5
HOH
HOH
343
B
HOH
345
5
HOH
HOH
345
B
HOH
347
5
HOH
HOH
347
B
HOH
350
5
HOH
HOH
350
B
HOH
351
5
HOH
HOH
351
B
HOH
352
5
HOH
HOH
352
B
HOH
354
5
HOH
HOH
354
B
HOH
355
5
HOH
HOH
355
B
HOH
358
5
HOH
HOH
358
B
HOH
360
5
HOH
HOH
360
B
HOH
362
5
HOH
HOH
362
B
HOH
365
5
HOH
HOH
365
B
HOH
366
5
HOH
HOH
366
B
HOH
367
5
HOH
HOH
367
B
HOH
371
5
HOH
HOH
371
B
HOH
373
5
HOH
HOH
373
B
HOH
377
5
HOH
HOH
377
B
HOH
382
5
HOH
HOH
382
B
HOH
384
5
HOH
HOH
384
B
HOH
388
5
HOH
HOH
388
B
HOH
393
5
HOH
HOH
393
B
HOH
396
5
HOH
HOH
396
B
HOH
398
5
HOH
HOH
398
B
HOH
401
5
HOH
HOH
401
B
HOH
403
5
HOH
HOH
403
B
HOH
405
5
HOH
HOH
405
B
HOH
407
5
HOH
HOH
407
B
HOH
409
5
HOH
HOH
409
B
HOH
410
5
HOH
HOH
410
B
HOH
413
5
HOH
HOH
413
B
HOH
414
5
HOH
HOH
414
B
HOH
416
5
HOH
HOH
416
B
HOH
419
5
HOH
HOH
419
B
HOH
422
5
HOH
HOH
422
B
HOH
423
5
HOH
HOH
423
B
HOH
425
5
HOH
HOH
425
B
HOH
426
5
HOH
HOH
426
B
HOH
427
5
HOH
HOH
427
B
HOH
428
5
HOH
HOH
428
B
HOH
430
5
HOH
HOH
430
B
HOH
431
5
HOH
HOH
431
B
HOH
433
5
HOH
HOH
433
B
HOH
434
5
HOH
HOH
434
B
HOH
436
5
HOH
HOH
436
B
HOH
439
5
HOH
HOH
439
B
HOH
442
5
HOH
HOH
442
B
HOH
444
5
HOH
HOH
444
B
HOH
446
5
HOH
HOH
446
B
HOH
449
5
HOH
HOH
449
B
HOH
450
5
HOH
HOH
450
B
HOH
451
5
HOH
HOH
451
B
HOH
453
5
HOH
HOH
453
B
HOH
455
5
HOH
HOH
455
B
HOH
457
5
HOH
HOH
457
B
HOH
458
5
HOH
HOH
458
B
HOH
459
5
HOH
HOH
459
B
HOH
461
5
HOH
HOH
461
B
HOH
462
5
HOH
HOH
462
B
HOH
463
5
HOH
HOH
463
B
HOH
465
5
HOH
HOH
465
B
HOH
468
5
HOH
HOH
468
B
HOH
469
5
HOH
HOH
469
B
HOH
473
5
HOH
HOH
473
B
HOH
478
5
HOH
HOH
478
B
HOH
481
5
HOH
HOH
481
B
HOH
483
5
HOH
HOH
483
B
HOH
484
5
HOH
HOH
484
B
HOH
485
5
HOH
HOH
485
B
HOH
488
5
HOH
HOH
488
B
HOH
490
5
HOH
HOH
490
B
HOH
491
5
HOH
HOH
491
B
HOH
493
5
HOH
HOH
493
B
HOH
494
5
HOH
HOH
494
B
HOH
495
5
HOH
HOH
495
B
HOH
496
5
HOH
HOH
496
B
HOH
500
5
HOH
HOH
500
B
HOH
501
5
HOH
HOH
501
B
HOH
502
5
HOH
HOH
502
B
HOH
506
5
HOH
HOH
506
B
HOH
507
5
HOH
HOH
507
B
HOH
513
5
HOH
HOH
513
B
HOH
514
5
HOH
HOH
514
B
HOH
516
5
HOH
HOH
516
B
HOH
518
5
HOH
HOH
518
B
HOH
520
5
HOH
HOH
520
B
HOH
522
5
HOH
HOH
522
B
HOH
523
5
HOH
HOH
523
B
HOH
524
5
HOH
HOH
524
B
HOH
525
5
HOH
HOH
525
B
HOH
526
5
HOH
HOH
526
B
HOH
528
5
HOH
HOH
528
B
HOH
529
5
HOH
HOH
529
B
HOH
533
5
HOH
HOH
533
B
HOH
534
5
HOH
HOH
534
B
HOH
536
5
HOH
HOH
536
B
HOH
539
5
HOH
HOH
539
B
HOH
540
5
HOH
HOH
540
B
HOH
541
5
HOH
HOH
541
B
HOH
542
5
HOH
HOH
542
B
HOH
543
5
HOH
HOH
543
B
HOH
545
5
HOH
HOH
545
B
HOH
546
5
HOH
HOH
546
B
HOH
554
5
HOH
HOH
554
B
HOH
555
5
HOH
HOH
555
B
HOH
556
5
HOH
HOH
556
B
HOH
557
5
HOH
HOH
557
B
HOH
558
5
HOH
HOH
558
B
HOH
559
5
HOH
HOH
559
B
HOH
560
5
HOH
HOH
560
B
HOH
561
5
HOH
HOH
561
B
HOH
562
5
HOH
HOH
562
B
HOH
566
5
HOH
HOH
566
B
n
1
0
A
n
2
25
A
n
3
26
A
GLY
27
n
4
GLY
27
A
ILE
28
n
5
ILE
28
A
GLN
29
n
6
GLN
29
A
PRO
30
n
7
PRO
30
A
SER
31
n
8
SER
31
A
LYS
32
n
9
LYS
32
A
LYS
33
n
10
LYS
33
A
LEU
34
n
11
LEU
34
A
ILE
35
n
12
ILE
35
A
THR
36
n
13
THR
36
A
ARG
37
n
14
ARG
37
A
ASP
38
n
15
ASP
38
A
TYR
39
n
16
TYR
39
A
LYS
40
n
17
LYS
40
A
VAL
41
n
18
VAL
41
A
LYS
42
n
19
LYS
42
A
GLU
43
n
20
GLU
43
A
PHE
44
n
21
PHE
44
A
ASN
45
n
22
ASN
45
A
LYS
46
n
23
LYS
46
A
ILE
47
n
24
ILE
47
A
ASP
48
n
25
ASP
48
A
ALA
49
n
26
ALA
49
A
GLY
50
n
27
GLY
50
A
THR
51
n
28
THR
51
A
VAL
52
n
29
VAL
52
A
GLY
53
n
30
GLY
53
A
ASN
54
n
31
ASN
54
A
ILE
55
n
32
ILE
55
A
TYR
56
n
33
TYR
56
A
TYR
57
n
34
TYR
57
A
THR
58
n
35
THR
58
A
GLN
59
n
36
GLN
59
A
SER
60
n
37
SER
60
A
THR
61
n
38
THR
61
A
ASP
62
n
39
ASP
62
A
GLY
63
n
40
GLY
63
A
LYS
64
n
41
LYS
64
A
THR
65
n
42
THR
65
A
ASP
66
n
43
ASP
66
A
LEU
67
n
44
LEU
67
A
GLN
68
n
45
GLN
68
A
ILE
69
n
46
ILE
69
A
TYR
70
n
47
TYR
70
A
GLY
71
n
48
GLY
71
A
PRO
72
n
49
PRO
72
A
ASP
73
n
50
ASP
73
A
ASN
74
n
51
ASN
74
A
ILE
75
n
52
ILE
75
A
VAL
76
n
53
VAL
76
A
ALA
77
n
54
ALA
77
A
LEU
78
n
55
LEU
78
A
ILE
79
n
56
ILE
79
A
GLN
80
n
57
GLN
80
A
VAL
81
n
58
VAL
81
A
ALA
82
n
59
ALA
82
A
VAL
83
n
60
VAL
83
A
LYS
84
n
61
LYS
84
A
ASP
85
n
62
ASP
85
A
ASN
86
n
63
ASN
86
A
THR
87
n
64
THR
87
A
LEU
88
n
65
LEU
88
A
PHE
89
n
66
PHE
89
A
LEU
90
n
67
LEU
90
A
SER
91
n
68
SER
91
A
ILE
92
n
69
ILE
92
A
ASP
93
n
70
ASP
93
A
LYS
94
n
71
LYS
94
A
SER
95
n
72
SER
95
A
LYS
96
n
73
LYS
96
A
LYS
97
n
74
LYS
97
A
VAL
98
n
75
VAL
98
A
ARG
99
n
76
ARG
99
A
ASN
100
n
77
ASN
100
A
PHE
101
n
78
PHE
101
A
LYS
102
n
79
LYS
102
A
LYS
103
n
80
LYS
103
A
MSE
104
n
81
MSE
104
A
LYS
105
n
82
LYS
105
A
ILE
106
n
83
ILE
106
A
THR
107
n
84
THR
107
A
ILE
108
n
85
ILE
108
A
THR
109
n
86
THR
109
A
SER
110
n
87
SER
110
A
PRO
111
n
88
PRO
111
A
THR
112
n
89
THR
112
A
LEU
113
n
90
LEU
113
A
ASN
114
n
91
ASN
114
A
GLY
115
n
92
GLY
115
A
ILE
116
n
93
ILE
116
A
SER
117
n
94
SER
117
A
PHE
118
n
95
PHE
118
A
LYS
119
n
96
LYS
119
A
GLY
120
n
97
GLY
120
A
VAL
121
n
98
VAL
121
A
GLY
122
n
99
GLY
122
A
ASP
123
n
100
ASP
123
A
VAL
124
n
101
VAL
124
A
HIS
125
n
102
HIS
125
A
ILE
126
n
103
ILE
126
A
GLU
127
n
104
GLU
127
A
ASN
128
n
105
ASN
128
A
GLY
129
n
106
GLY
129
A
LEU
130
n
107
LEU
130
A
THR
131
n
108
THR
131
A
THR
132
n
109
THR
132
A
ASP
133
n
110
ASP
133
A
ASN
134
n
111
ASN
134
A
LEU
135
n
112
LEU
135
A
ASP
136
n
113
ASP
136
A
ILE
137
n
114
ILE
137
A
GLU
138
n
115
GLU
138
A
SER
139
n
116
SER
139
A
LYS
140
n
117
LYS
140
A
GLY
141
n
118
GLY
141
A
VAL
142
n
119
VAL
142
A
GLY
143
n
120
GLY
143
A
ASN
144
n
121
ASN
144
A
VAL
145
n
122
VAL
145
A
ASP
146
n
123
ASP
146
A
ILE
147
n
124
ILE
147
A
GLN
148
n
125
GLN
148
A
SER
149
n
126
SER
149
A
LEU
150
n
127
LEU
150
A
THR
151
n
128
THR
151
A
CYS
152
n
129
CYS
152
A
GLN
153
n
130
GLN
153
A
LYS
154
n
131
LYS
154
A
LEU
155
n
132
LEU
155
A
ASN
156
n
133
ASN
156
A
VAL
157
n
134
VAL
157
A
GLN
158
n
135
GLN
158
A
SER
159
n
136
SER
159
A
MSE
160
n
137
MSE
160
A
GLY
161
n
138
GLY
161
A
VAL
162
n
139
VAL
162
A
GLY
163
n
140
GLY
163
A
ASP
164
n
141
ASP
164
A
VAL
165
n
142
VAL
165
A
LYS
166
n
143
LYS
166
A
LEU
167
n
144
LEU
167
A
GLU
168
n
145
GLU
168
A
GLY
169
n
146
GLY
169
A
THR
170
n
147
THR
170
A
ALA
171
n
148
ALA
171
A
GLN
172
n
149
GLN
172
A
ILE
173
n
150
ILE
173
A
ALA
174
n
151
ALA
174
A
ALA
175
n
152
ALA
175
A
LEU
176
n
153
LEU
176
A
HIS
177
n
154
HIS
177
A
SER
178
n
155
SER
178
A
LYS
179
n
156
LYS
179
A
GLY
180
n
157
GLY
180
A
VAL
181
n
158
VAL
181
A
GLY
182
n
159
GLY
182
A
ASN
183
n
160
ASN
183
A
ILE
184
n
161
ILE
184
A
GLU
185
n
162
GLU
185
A
ALA
186
n
163
ALA
186
A
GLY
187
n
164
GLY
187
A
ASN
188
n
165
ASN
188
A
LEU
189
n
166
LEU
189
A
ARG
190
n
167
ARG
190
A
ALA
191
n
168
ALA
191
A
ASN
192
n
169
ASN
192
A
ALA
193
n
170
ALA
193
A
VAL
194
n
171
VAL
194
A
GLU
195
n
172
GLU
195
A
ALA
196
n
173
ALA
196
A
SER
197
n
174
SER
197
A
SER
198
n
175
SER
198
A
GLN
199
n
176
GLN
199
A
GLY
200
n
177
GLY
200
A
VAL
201
n
178
VAL
201
A
GLY
202
n
179
GLY
202
A
ASP
203
n
180
ASP
203
A
ILE
204
n
181
ILE
204
A
THR
205
n
182
THR
205
A
CYS
206
n
183
CYS
206
A
ASN
207
n
184
ASN
207
A
ALA
208
n
185
ALA
208
A
THR
209
n
186
THR
209
A
GLU
210
n
187
GLU
210
A
SER
211
n
188
SER
211
A
ILE
212
n
189
ILE
212
A
ASP
213
n
190
ASP
213
A
ALA
214
n
191
ALA
214
A
ALA
215
n
192
ALA
215
A
VAL
216
n
193
VAL
216
A
ARG
217
n
194
ARG
217
A
GLY
218
n
195
GLY
218
A
VAL
219
n
196
VAL
219
A
GLY
220
n
197
GLY
220
A
SER
221
n
198
SER
221
A
ILE
222
n
199
ILE
222
A
LYS
223
n
200
LYS
223
A
TYR
224
n
201
TYR
224
A
LYS
225
n
202
LYS
225
A
GLY
226
n
203
GLY
226
A
SER
227
n
204
SER
227
A
PRO
228
n
205
PRO
228
A
THR
229
n
206
THR
229
A
ILE
230
n
207
ILE
230
A
LYS
231
n
208
LYS
231
A
SER
232
n
209
SER
232
A
LEU
233
n
210
LEU
233
A
SER
234
n
211
SER
234
A
LYS
235
n
212
LYS
235
A
LYS
236
n
213
LYS
236
A
GLY
237
n
214
GLY
237
A
VAL
238
n
215
VAL
238
A
GLY
239
n
216
GLY
239
A
THR
240
n
217
THR
240
A
ILE
241
n
218
ILE
241
A
LYS
242
n
219
LYS
242
A
ASN
243
n
220
ASN
243
A
ILE
244
n
221
ILE
244
A
n
1
0
B
n
2
25
B
n
3
26
B
GLY
27
n
4
GLY
27
B
ILE
28
n
5
ILE
28
B
GLN
29
n
6
GLN
29
B
PRO
30
n
7
PRO
30
B
SER
31
n
8
SER
31
B
LYS
32
n
9
LYS
32
B
LYS
33
n
10
LYS
33
B
LEU
34
n
11
LEU
34
B
ILE
35
n
12
ILE
35
B
THR
36
n
13
THR
36
B
ARG
37
n
14
ARG
37
B
ASP
38
n
15
ASP
38
B
TYR
39
n
16
TYR
39
B
LYS
40
n
17
LYS
40
B
VAL
41
n
18
VAL
41
B
LYS
42
n
19
LYS
42
B
GLU
43
n
20
GLU
43
B
PHE
44
n
21
PHE
44
B
ASN
45
n
22
ASN
45
B
LYS
46
n
23
LYS
46
B
ILE
47
n
24
ILE
47
B
ASP
48
n
25
ASP
48
B
ALA
49
n
26
ALA
49
B
GLY
50
n
27
GLY
50
B
THR
51
n
28
THR
51
B
VAL
52
n
29
VAL
52
B
GLY
53
n
30
GLY
53
B
ASN
54
n
31
ASN
54
B
ILE
55
n
32
ILE
55
B
TYR
56
n
33
TYR
56
B
TYR
57
n
34
TYR
57
B
THR
58
n
35
THR
58
B
GLN
59
n
36
GLN
59
B
SER
60
n
37
SER
60
B
THR
61
n
38
THR
61
B
ASP
62
n
39
ASP
62
B
GLY
63
n
40
GLY
63
B
LYS
64
n
41
LYS
64
B
THR
65
n
42
THR
65
B
ASP
66
n
43
ASP
66
B
LEU
67
n
44
LEU
67
B
GLN
68
n
45
GLN
68
B
ILE
69
n
46
ILE
69
B
TYR
70
n
47
TYR
70
B
GLY
71
n
48
GLY
71
B
PRO
72
n
49
PRO
72
B
ASP
73
n
50
ASP
73
B
ASN
74
n
51
ASN
74
B
ILE
75
n
52
ILE
75
B
VAL
76
n
53
VAL
76
B
ALA
77
n
54
ALA
77
B
LEU
78
n
55
LEU
78
B
ILE
79
n
56
ILE
79
B
GLN
80
n
57
GLN
80
B
VAL
81
n
58
VAL
81
B
ALA
82
n
59
ALA
82
B
VAL
83
n
60
VAL
83
B
LYS
84
n
61
LYS
84
B
ASP
85
n
62
ASP
85
B
ASN
86
n
63
ASN
86
B
THR
87
n
64
THR
87
B
LEU
88
n
65
LEU
88
B
PHE
89
n
66
PHE
89
B
LEU
90
n
67
LEU
90
B
SER
91
n
68
SER
91
B
ILE
92
n
69
ILE
92
B
ASP
93
n
70
ASP
93
B
LYS
94
n
71
LYS
94
B
SER
95
n
72
SER
95
B
LYS
96
n
73
LYS
96
B
LYS
97
n
74
LYS
97
B
VAL
98
n
75
VAL
98
B
ARG
99
n
76
ARG
99
B
ASN
100
n
77
ASN
100
B
PHE
101
n
78
PHE
101
B
LYS
102
n
79
LYS
102
B
LYS
103
n
80
LYS
103
B
MSE
104
n
81
MSE
104
B
LYS
105
n
82
LYS
105
B
ILE
106
n
83
ILE
106
B
THR
107
n
84
THR
107
B
ILE
108
n
85
ILE
108
B
THR
109
n
86
THR
109
B
SER
110
n
87
SER
110
B
PRO
111
n
88
PRO
111
B
THR
112
n
89
THR
112
B
LEU
113
n
90
LEU
113
B
ASN
114
n
91
ASN
114
B
GLY
115
n
92
GLY
115
B
ILE
116
n
93
ILE
116
B
SER
117
n
94
SER
117
B
PHE
118
n
95
PHE
118
B
LYS
119
n
96
LYS
119
B
GLY
120
n
97
GLY
120
B
VAL
121
n
98
VAL
121
B
GLY
122
n
99
GLY
122
B
ASP
123
n
100
ASP
123
B
VAL
124
n
101
VAL
124
B
HIS
125
n
102
HIS
125
B
ILE
126
n
103
ILE
126
B
GLU
127
n
104
GLU
127
B
ASN
128
n
105
ASN
128
B
GLY
129
n
106
GLY
129
B
LEU
130
n
107
LEU
130
B
THR
131
n
108
THR
131
B
THR
132
n
109
THR
132
B
ASP
133
n
110
ASP
133
B
ASN
134
n
111
ASN
134
B
LEU
135
n
112
LEU
135
B
ASP
136
n
113
ASP
136
B
ILE
137
n
114
ILE
137
B
GLU
138
n
115
GLU
138
B
SER
139
n
116
SER
139
B
LYS
140
n
117
LYS
140
B
GLY
141
n
118
GLY
141
B
VAL
142
n
119
VAL
142
B
GLY
143
n
120
GLY
143
B
ASN
144
n
121
ASN
144
B
VAL
145
n
122
VAL
145
B
ASP
146
n
123
ASP
146
B
ILE
147
n
124
ILE
147
B
GLN
148
n
125
GLN
148
B
SER
149
n
126
SER
149
B
LEU
150
n
127
LEU
150
B
THR
151
n
128
THR
151
B
CYS
152
n
129
CYS
152
B
GLN
153
n
130
GLN
153
B
LYS
154
n
131
LYS
154
B
LEU
155
n
132
LEU
155
B
ASN
156
n
133
ASN
156
B
VAL
157
n
134
VAL
157
B
GLN
158
n
135
GLN
158
B
SER
159
n
136
SER
159
B
MSE
160
n
137
MSE
160
B
GLY
161
n
138
GLY
161
B
VAL
162
n
139
VAL
162
B
GLY
163
n
140
GLY
163
B
ASP
164
n
141
ASP
164
B
VAL
165
n
142
VAL
165
B
LYS
166
n
143
LYS
166
B
LEU
167
n
144
LEU
167
B
GLU
168
n
145
GLU
168
B
GLY
169
n
146
GLY
169
B
THR
170
n
147
THR
170
B
ALA
171
n
148
ALA
171
B
GLN
172
n
149
GLN
172
B
ILE
173
n
150
ILE
173
B
ALA
174
n
151
ALA
174
B
ALA
175
n
152
ALA
175
B
LEU
176
n
153
LEU
176
B
HIS
177
n
154
HIS
177
B
SER
178
n
155
SER
178
B
LYS
179
n
156
LYS
179
B
GLY
180
n
157
GLY
180
B
VAL
181
n
158
VAL
181
B
GLY
182
n
159
GLY
182
B
ASN
183
n
160
ASN
183
B
ILE
184
n
161
ILE
184
B
GLU
185
n
162
GLU
185
B
ALA
186
n
163
ALA
186
B
GLY
187
n
164
GLY
187
B
ASN
188
n
165
ASN
188
B
LEU
189
n
166
LEU
189
B
ARG
190
n
167
ARG
190
B
ALA
191
n
168
ALA
191
B
ASN
192
n
169
ASN
192
B
ALA
193
n
170
ALA
193
B
VAL
194
n
171
VAL
194
B
GLU
195
n
172
GLU
195
B
ALA
196
n
173
ALA
196
B
SER
197
n
174
SER
197
B
SER
198
n
175
SER
198
B
GLN
199
n
176
GLN
199
B
GLY
200
n
177
GLY
200
B
VAL
201
n
178
VAL
201
B
GLY
202
n
179
GLY
202
B
ASP
203
n
180
ASP
203
B
ILE
204
n
181
ILE
204
B
THR
205
n
182
THR
205
B
CYS
206
n
183
CYS
206
B
ASN
207
n
184
ASN
207
B
ALA
208
n
185
ALA
208
B
THR
209
n
186
THR
209
B
GLU
210
n
187
GLU
210
B
SER
211
n
188
SER
211
B
ILE
212
n
189
ILE
212
B
ASP
213
n
190
ASP
213
B
ALA
214
n
191
ALA
214
B
ALA
215
n
192
ALA
215
B
VAL
216
n
193
VAL
216
B
ARG
217
n
194
ARG
217
B
GLY
218
n
195
GLY
218
B
VAL
219
n
196
VAL
219
B
GLY
220
n
197
GLY
220
B
SER
221
n
198
SER
221
B
ILE
222
n
199
ILE
222
B
LYS
223
n
200
LYS
223
B
TYR
224
n
201
TYR
224
B
LYS
225
n
202
LYS
225
B
GLY
226
n
203
GLY
226
B
SER
227
n
204
SER
227
B
PRO
228
n
205
PRO
228
B
THR
229
n
206
THR
229
B
ILE
230
n
207
ILE
230
B
LYS
231
n
208
LYS
231
B
SER
232
n
209
SER
232
B
LEU
233
n
210
LEU
233
B
SER
234
n
211
SER
234
B
LYS
235
n
212
LYS
235
B
LYS
236
n
213
LYS
236
B
GLY
237
n
214
GLY
237
B
VAL
238
n
215
VAL
238
B
GLY
239
n
216
GLY
239
B
THR
240
n
217
THR
240
B
ILE
241
n
218
ILE
241
B
LYS
242
n
219
LYS
242
B
ASN
243
n
220
ASN
243
B
ILE
244
n
221
ILE
244
B
0.2983
-0.0592
-0.0283
0.6088
0.1628
1.4290
0.0107
0.0313
0.0405
0.0072
-0.0184
-0.0073
-0.1140
-0.0422
0.0078
-0.0043
0.0131
-0.0090
-0.0586
0.0162
-0.0530
refined
23.5064
19.1780
67.4819
X-RAY DIFFRACTION
0.4301
-0.0566
0.1328
0.5402
0.2338
2.1809
-0.0277
0.0134
0.0163
-0.0170
-0.0412
-0.0185
-0.0314
0.0285
0.0689
-0.0227
0.0026
-0.0123
-0.0864
0.0084
-0.0515
refined
34.5072
-2.8880
85.7450
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
chain A
X-RAY DIFFRACTION
2
chain B
author_defined_assembly
2
dimeric
software_defined_assembly
PISA
1
monomeric
software_defined_assembly
PISA
1
monomeric
A
MSE
104
SELENOMETHIONINE
A
MSE
81
MET
A
MSE
160
SELENOMETHIONINE
A
MSE
137
MET
B
MSE
104
SELENOMETHIONINE
B
MSE
81
MET
B
MSE
160
SELENOMETHIONINE
B
MSE
137
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ARG
37
A
N
ARG
14
A
O
ILE
69
A
O
ILE
46
A
N
GLN
68
A
N
GLN
45
A
O
THR
107
A
O
THR
84
A
O
ILE
106
A
O
ILE
83
A
N
ASN
54
A
N
ASN
31
A
N
TYR
57
A
N
TYR
34
A
O
HIS
125
A
O
HIS
102
A
N
VAL
124
A
N
VAL
101
A
O
ASP
146
A
O
ASP
123
A
O
THR
151
A
O
THR
128
A
N
LEU
130
A
N
LEU
107
A
N
VAL
145
A
N
VAL
122
A
O
LYS
166
A
O
LYS
143
A
O
ALA
175
A
O
ALA
152
A
N
LEU
155
A
N
LEU
132
A
O
ASN
156
A
O
ASN
133
A
N
ILE
137
A
N
ILE
114
A
O
GLU
138
A
O
GLU
115
A
N
PHE
118
A
N
PHE
95
A
O
SER
117
A
O
SER
94
A
N
ILE
47
A
N
ILE
24
A
N
ASP
48
A
N
ASP
25
A
O
LEU
88
A
O
LEU
65
A
O
PHE
89
A
O
PHE
66
A
N
ALA
82
A
N
ALA
59
A
N
LEU
176
A
N
LEU
153
A
O
GLU
195
A
O
GLU
172
A
N
ALA
196
A
N
ALA
173
A
O
ASP
213
A
O
ASP
190
A
N
ALA
214
A
N
ALA
191
A
O
SER
232
A
O
SER
209
A
O
SER
232
A
O
SER
209
A
N
ALA
214
A
N
ALA
191
A
N
ILE
204
A
N
ILE
181
A
O
LYS
223
A
O
LYS
200
A
N
TYR
224
A
N
TYR
201
A
O
LYS
242
A
O
LYS
219
B
N
TYR
39
B
N
TYR
16
B
O
LEU
67
B
O
LEU
44
B
N
TYR
70
B
N
TYR
47
B
O
LYS
105
B
O
LYS
82
B
O
ILE
108
B
O
ILE
85
B
N
TYR
56
B
N
TYR
33
B
N
TYR
57
B
N
TYR
34
B
O
HIS
125
B
O
HIS
102
B
N
VAL
124
B
N
VAL
101
B
O
ASP
146
B
O
ASP
123
B
O
THR
151
B
O
THR
128
B
N
LEU
130
B
N
LEU
107
B
N
VAL
145
B
N
VAL
122
B
O
LYS
166
B
O
LYS
143
B
O
ALA
175
B
O
ALA
152
B
N
LEU
155
B
N
LEU
132
B
O
ASN
156
B
O
ASN
133
B
N
ILE
137
B
N
ILE
114
B
O
GLU
138
B
O
GLU
115
B
N
ILE
116
B
N
ILE
93
B
O
SER
117
B
O
SER
94
B
N
ILE
47
B
N
ILE
24
B
N
LYS
46
B
N
LYS
23
B
O
LEU
88
B
O
LEU
65
B
O
PHE
89
B
O
PHE
66
B
N
ALA
82
B
N
ALA
59
B
N
LEU
176
B
N
LEU
153
B
O
GLU
195
B
O
GLU
172
B
N
ALA
196
B
N
ALA
173
B
O
ASP
213
B
O
ASP
190
B
N
ALA
214
B
N
ALA
191
B
O
SER
232
B
O
SER
209
B
O
SER
232
B
O
SER
209
B
N
ALA
214
B
N
ALA
191
B
N
ILE
204
B
N
ILE
181
B
O
LYS
223
B
O
LYS
200
B
N
TYR
224
B
N
TYR
201
B
O
LYS
242
B
O
LYS
219
1
A
CE
LYS
33
A
CE
LYS
10
1
Y
1
A
NZ
LYS
33
A
NZ
LYS
10
1
Y
1
A
CG
LYS
40
A
CG
LYS
17
1
Y
1
A
CD
LYS
40
A
CD
LYS
17
1
Y
1
A
CE
LYS
40
A
CE
LYS
17
1
Y
1
A
NZ
LYS
40
A
NZ
LYS
17
1
Y
1
A
CG
ARG
99
A
CG
ARG
76
1
Y
1
A
CD
ARG
99
A
CD
ARG
76
1
Y
1
A
NE
ARG
99
A
NE
ARG
76
1
Y
1
A
CZ
ARG
99
A
CZ
ARG
76
1
Y
1
A
NH1
ARG
99
A
NH1
ARG
76
1
Y
1
A
NH2
ARG
99
A
NH2
ARG
76
1
Y
1
A
CE
LYS
235
A
CE
LYS
212
1
Y
1
A
NZ
LYS
235
A
NZ
LYS
212
1
Y
1
B
CG
LYS
32
B
CG
LYS
9
1
Y
1
B
CD
LYS
32
B
CD
LYS
9
1
Y
1
B
CE
LYS
32
B
CE
LYS
9
1
Y
1
B
NZ
LYS
32
B
NZ
LYS
9
1
Y
1
B
CG
LYS
40
B
CG
LYS
17
1
Y
1
B
CD
LYS
40
B
CD
LYS
17
1
Y
1
B
CE
LYS
40
B
CE
LYS
17
1
Y
1
B
NZ
LYS
40
B
NZ
LYS
17
1
Y
1
B
CG
LYS
96
B
CG
LYS
73
1
Y
1
B
CD
LYS
96
B
CD
LYS
73
1
Y
1
B
CE
LYS
96
B
CE
LYS
73
1
Y
1
B
NZ
LYS
96
B
NZ
LYS
73
1
Y
1
B
CG
LYS
97
B
CG
LYS
74
1
Y
1
B
CD
LYS
97
B
CD
LYS
74
1
Y
1
B
CE
LYS
97
B
CE
LYS
74
1
Y
1
B
NZ
LYS
97
B
NZ
LYS
74
1
Y
1
B
CG
ARG
99
B
CG
ARG
76
1
Y
1
B
CD
ARG
99
B
CD
ARG
76
1
Y
1
B
NE
ARG
99
B
NE
ARG
76
1
Y
1
B
CZ
ARG
99
B
CZ
ARG
76
1
Y
1
B
NH1
ARG
99
B
NH1
ARG
76
1
Y
1
B
NH2
ARG
99
B
NH2
ARG
76
1
Y
1
A
C5
PG4
255
H
C5
PG4
1
1
N
1
A
C6
PG4
255
H
C6
PG4
1
1
N
1
A
O4
PG4
255
H
O4
PG4
1
1
N
1
A
C7
PG4
255
H
C7
PG4
1
1
N
1
A
C8
PG4
255
H
C8
PG4
1
1
N
1
A
O5
PG4
255
H
O5
PG4
1
1
N
1
A
C7
PG4
256
I
C7
PG4
1
1
N
1
A
C8
PG4
256
I
C8
PG4
1
1
N
1
A
O5
PG4
256
I
O5
PG4
1
1
N
1
A
C5
PG4
261
K
C5
PG4
1
1
N
1
A
C6
PG4
261
K
C6
PG4
1
1
N
1
A
O4
PG4
261
K
O4
PG4
1
1
N
1
A
C7
PG4
261
K
C7
PG4
1
1
N
1
A
C8
PG4
261
K
C8
PG4
1
1
N
1
A
O5
PG4
261
K
O5
PG4
1
1
N
1
A
C5
PG4
262
L
C5
PG4
1
1
N
1
A
C6
PG4
262
L
C6
PG4
1
1
N
1
A
O4
PG4
262
L
O4
PG4
1
1
N
1
A
C7
PG4
262
L
C7
PG4
1
1
N
1
A
C8
PG4
262
L
C8
PG4
1
1
N
1
A
O5
PG4
262
L
O5
PG4
1
1
N
1
B
C8
PG4
253
Q
C8
PG4
1
1
N
1
B
O5
PG4
253
Q
O5
PG4
1
1
N
1
B
C7
PG4
257
R
C7
PG4
1
1
N
1
B
C8
PG4
257
R
C8
PG4
1
1
N
1
B
O5
PG4
257
R
O5
PG4
1
1
N
1
B
C5
PG4
258
S
C5
PG4
1
1
N
1
B
C6
PG4
258
S
C6
PG4
1
1
N
1
B
O4
PG4
258
S
O4
PG4
1
1
N
1
B
C7
PG4
258
S
C7
PG4
1
1
N
1
B
C8
PG4
258
S
C8
PG4
1
1
N
1
B
O5
PG4
258
S
O5
PG4
1
1
N
1
B
C3
PG4
259
T
C3
PG4
1
1
N
1
B
C4
PG4
259
T
C4
PG4
1
1
N
1
B
O3
PG4
259
T
O3
PG4
1
1
N
1
B
C5
PG4
259
T
C5
PG4
1
1
N
1
B
C6
PG4
259
T
C6
PG4
1
1
N
1
B
O4
PG4
259
T
O4
PG4
1
1
N
1
B
C7
PG4
259
T
C7
PG4
1
1
N
1
B
C8
PG4
259
T
C8
PG4
1
1
N
1
B
O5
PG4
259
T
O5
PG4
1
1
N
1
A
GLY
0
A
GLY
1
1
Y
1
A
GLY
25
A
GLY
2
1
Y
1
A
GLU
26
A
GLU
3
1
Y
1
B
GLY
0
B
GLY
1
1
Y
1
B
GLY
25
B
GLY
2
1
Y
1
B
GLU
26
B
GLU
3
1
Y
1
A
LYS
103
86.58
-7.59
1
B
LYS
236
-160.54
74.53
106.680
28.8360
11.080
-5.6207
0.0000
0.0000
-0.9225
0.0000
6.5433
0.9491
0.9210
1. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 2. CHLORIDE (CL), ACETATE (ACT), POLYETHYLENE GLYCOL FRAGMENTS (PG4) MODELED ARE PRESENT PROTEIN/CRYSTALLIZATION/CRYO BUFFER. 3. NON-CRYSTALLOGRAPHIC RESTRAINTS WERE APPLIED DURING REFINEMENT (AUTONCS). 4. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 5. REFINEMENT WAS RESTRAINED TO THE MAD PHASES
0.2102
0.1758
0.1775
2.0700
45.392
1530
30217
5.0600
1.000
0.300
RANDOM
1,2
THROUGHOUT
0.000
MAD
2.0700
45.392
304
3659
151
0
3204
1731
SINUSOIDAL
2.000
100
HARMONIC
2.000
496
HARMONIC
5.000
3465
HARMONIC
20.000
2
SEMIHARMONIC
5.000
484
SEMIHARMONIC
5.000
3788
SEMIHARMONIC
4.000
0.010
3465
HARMONIC
2.000
1.220
4641
HARMONIC
2.000
3.830
2.710
0.2175
0.1868
0.1884
2.1400
143
2617
2760
15
5.1800
21.558
2.07
45.392
3PET
30470
-3.000
0.153
1,2
8.850
100.000
0.814
2.070
2.140
2.2
25278
5397
1,2
100.000
0.600
2.140
2.230
2.9
27742
5942
1,2
100.000
0.503
2.230
2.330
3.3
26284
5627
1,2
100.000
0.435
2.330
2.450
3.7
26020
5541
1,2
100.000
0.396
2.450
2.610
4.0
27730
5901
1,2
100.000
0.297
2.610
2.810
5.3
26657
5652
1,2
100.000
0.188
2.810
3.090
8.1
26288
5596
1,2
100.000
0.098
3.090
3.530
14.2
26890
5670
1,2
100.000
0.062
3.530
4.440
21.1
26810
5679
1,2
100.000
0.048
4.440
45.392
23.4
27320
5776
1,2
99.800
data processing
Wolfgang Kabsch
http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html
XSCALE
package
phasing
George M. Sheldrick
gsheldr@shelx.uni-ac.gwdg.de
Fortran_77
http://shelx.uni-ac.gwdg.de/SHELX/
SHELX
package
phasing
Eric de La Fortelle
sharp-develop@globalphasing.com
http://www.globalphasing.com/sharp/
SHARP
package
refinement
Gerard Bricogne
buster-develop@GlobalPhasing.com
http://www.globalphasing.com/buster/
BUSTER-TNT
program
BUSTER 2.8.0
data extraction
PDB
deposit@deposit.rcsb.org
June 10, 2010
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.10
data reduction
XDS
data scaling
XSCALE
phasing
SHELXD
phasing
autoSHARP
refinement
BUSTER
2.8.0
Crystal structure of a putative adhesin (BF0245) from Bacteroides fragilis NCTC 9343 at 2.07 A resolution
1
N
N
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
5
N
N
5
N
N
A
ASP
73
A
ASP
50
HELX_P
A
ALA
77
A
ALA
54
1
1
5
B
ASP
73
B
ASP
50
HELX_P
B
ALA
77
B
ALA
54
1
2
5
covale
1.363
both
A
LYS
103
A
C
LYS
80
1_555
A
MSE
104
A
N
MSE
81
1_555
covale
1.340
both
A
MSE
104
A
C
MSE
81
1_555
A
LYS
105
A
N
LYS
82
1_555
covale
1.331
both
A
SER
159
A
C
SER
136
1_555
A
MSE
160
A
N
MSE
137
1_555
covale
1.326
both
A
MSE
160
A
C
MSE
137
1_555
A
GLY
161
A
N
GLY
138
1_555
covale
1.326
both
B
LYS
103
B
C
LYS
80
1_555
B
MSE
104
B
N
MSE
81
1_555
covale
1.318
both
B
MSE
104
B
C
MSE
81
1_555
B
LYS
105
B
N
LYS
82
1_555
covale
1.343
both
B
SER
159
B
C
SER
136
1_555
B
MSE
160
B
N
MSE
137
1_555
covale
1.316
both
B
MSE
160
B
C
MSE
137
1_555
B
GLY
161
B
N
GLY
138
1_555
CELL ADHESION
RIGHT-HANDED BETA-HELIX, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-BIOLOGY, CELL ADHESION
Q5LIP7_BACFN
UNP
1
25
Q5LIP7
GEGIQPSKKLITRDYKVKEFNKIDAGTVGNIYYTQSTDGKTDLQIYGPDNIVALIQVAVKDNTLFLSIDKSKKVRNFKKM
KITITSPTLNGISFKGVGDVHIENGLTTDNLDIESKGVGNVDIQSLTCQKLNVQSMGVGDVKLEGTAQIAALHSKGVGNI
EAGNLRANAVEASSQGVGDITCNATESIDAAVRGVGSIKYKGSPTIKSLSKKGVGTIKNI
25
244
3PET
25
244
Q5LIP7
A
1
2
221
25
244
3PET
25
244
Q5LIP7
B
1
2
221
1
expression tag
GLY
0
3PET
A
Q5LIP7
UNP
1
2
expression tag
GLY
0
3PET
B
Q5LIP7
UNP
1
7
8
7
7
8
7
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
LEU
34
A
LEU
11
A
TYR
39
A
TYR
16
A
ASP
66
A
ASP
43
A
PRO
72
A
PRO
49
A
LYS
105
A
LYS
82
A
SER
110
A
SER
87
A
ASN
54
A
ASN
31
A
GLN
59
A
GLN
36
A
VAL
124
A
VAL
101
A
ILE
126
A
ILE
103
A
VAL
145
A
VAL
122
A
THR
151
A
THR
128
A
LEU
130
A
LEU
107
A
THR
131
A
THR
108
A
VAL
145
A
VAL
122
A
THR
151
A
THR
128
A
VAL
165
A
VAL
142
A
SER
178
A
SER
155
A
LYS
154
A
LYS
131
A
SER
159
A
SER
136
A
ASN
134
A
ASN
111
A
SER
139
A
SER
116
A
GLY
115
A
GLY
92
A
PHE
118
A
PHE
95
A
LYS
46
A
LYS
23
A
ALA
49
A
ALA
26
A
THR
87
A
THR
64
A
ILE
92
A
ILE
69
A
ILE
79
A
ILE
56
A
LYS
84
A
LYS
61
A
VAL
165
A
VAL
142
A
SER
178
A
SER
155
A
ILE
184
A
ILE
161
A
SER
198
A
SER
175
A
ILE
204
A
ILE
181
A
VAL
216
A
VAL
193
A
ILE
230
A
ILE
207
A
LYS
235
A
LYS
212
A
ILE
204
A
ILE
181
A
VAL
216
A
VAL
193
A
ILE
222
A
ILE
199
A
LYS
225
A
LYS
202
A
ILE
241
A
ILE
218
A
ASN
243
A
ASN
220
B
LEU
34
B
LEU
11
B
TYR
39
B
TYR
16
B
ASP
66
B
ASP
43
B
PRO
72
B
PRO
49
B
LYS
105
B
LYS
82
B
SER
110
B
SER
87
B
ASN
54
B
ASN
31
B
GLN
59
B
GLN
36
B
VAL
124
B
VAL
101
B
ILE
126
B
ILE
103
B
VAL
145
B
VAL
122
B
THR
151
B
THR
128
B
LEU
130
B
LEU
107
B
THR
131
B
THR
108
B
VAL
145
B
VAL
122
B
THR
151
B
THR
128
B
VAL
165
B
VAL
142
B
SER
178
B
SER
155
B
LYS
154
B
LYS
131
B
SER
159
B
SER
136
B
ASN
134
B
ASN
111
B
SER
139
B
SER
116
B
GLY
115
B
GLY
92
B
PHE
118
B
PHE
95
B
LYS
46
B
LYS
23
B
ALA
49
B
ALA
26
B
THR
87
B
THR
64
B
ILE
92
B
ILE
69
B
ILE
79
B
ILE
56
B
LYS
84
B
LYS
61
B
VAL
165
B
VAL
142
B
SER
178
B
SER
155
B
ILE
184
B
ILE
161
B
SER
198
B
SER
175
B
ILE
204
B
ILE
181
B
VAL
216
B
VAL
193
B
ILE
230
B
ILE
207
B
LYS
235
B
LYS
212
B
ILE
204
B
ILE
181
B
VAL
216
B
VAL
193
B
ILE
222
B
ILE
199
B
LYS
225
B
LYS
202
B
ILE
241
B
ILE
218
B
ASN
243
B
ASN
220
BINDING SITE FOR RESIDUE CL A 246
A
CL
246
Software
3
BINDING SITE FOR RESIDUE ACT A 247
A
ACT
247
Software
5
BINDING SITE FOR RESIDUE PG4 A 249
A
PG4
249
Software
4
BINDING SITE FOR RESIDUE PG4 A 251
A
PG4
251
Software
8
BINDING SITE FOR RESIDUE PG4 A 254
A
PG4
254
Software
5
BINDING SITE FOR RESIDUE PG4 A 255
A
PG4
255
Software
7
BINDING SITE FOR RESIDUE PG4 A 256
A
PG4
256
Software
5
BINDING SITE FOR RESIDUE PG4 A 260
A
PG4
260
Software
5
BINDING SITE FOR RESIDUE PG4 A 261
A
PG4
261
Software
2
BINDING SITE FOR RESIDUE PG4 A 262
A
PG4
262
Software
5
BINDING SITE FOR RESIDUE CL B 245
B
CL
245
Software
3
BINDING SITE FOR RESIDUE ACT B 248
B
ACT
248
Software
5
BINDING SITE FOR RESIDUE PG4 B 250
B
PG4
250
Software
3
BINDING SITE FOR RESIDUE PG4 B 252
B
PG4
252
Software
3
BINDING SITE FOR RESIDUE PG4 B 253
B
PG4
253
Software
6
BINDING SITE FOR RESIDUE PG4 B 257
B
PG4
257
Software
8
BINDING SITE FOR RESIDUE PG4 B 258
B
PG4
258
Software
4
BINDING SITE FOR RESIDUE PG4 B 259
B
PG4
259
Software
5
A
GLU
185
A
GLU
162
3
1_555
A
ALA
186
A
ALA
163
3
1_555
A
GLY
187
A
GLY
164
3
1_555
A
VAL
52
A
VAL
29
5
1_555
A
ILE
75
A
ILE
52
5
1_555
A
ILE
92
A
ILE
69
5
1_555
A
PHE
101
A
PHE
78
5
1_555
A
MSE
104
A
MSE
81
5
1_555
A
TYR
56
A
TYR
33
4
1_555
A
TYR
70
A
TYR
47
4
1_555
A
LYS
105
A
LYS
82
4
1_555
A
HOH
397
U
HOH
4
1_555
A
LYS
64
A
LYS
41
8
3_645
A
LYS
94
A
LYS
71
8
1_555
A
LYS
119
A
LYS
96
8
1_555
A
HOH
363
U
HOH
8
1_555
B
ARG
217
B
ARG
194
8
1_555
B
VAL
219
B
VAL
196
8
1_555
B
LYS
236
B
LYS
213
8
1_555
B
VAL
238
B
VAL
215
8
1_555
A
THR
61
A
THR
38
5
3_645
A
ASP
62
A
ASP
39
5
3_645
A
LYS
84
A
LYS
61
5
1_555
A
PHE
89
A
PHE
66
5
1_555
A
HOH
479
U
HOH
5
3_645
A
GLU
43
A
GLU
20
7
3_645
A
ASN
45
A
ASN
22
7
3_645
A
ASN
86
A
ASN
63
7
3_645
A
SER
95
A
SER
72
7
1_555
A
LYS
96
A
LYS
73
7
1_555
A
THR
112
A
THR
89
7
3_645
A
HOH
515
U
HOH
7
3_645
A
LYS
179
A
LYS
156
5
1_555
A
GLN
199
A
GLN
176
5
1_555
B
LYS
140
B
LYS
117
5
1_555
B
VAL
142
B
VAL
119
5
1_555
B
PG4
257
R
PG4
5
1_555
A
ALA
171
A
ALA
148
5
1_555
A
GLN
172
A
GLN
149
5
1_555
A
ARG
190
A
ARG
167
5
1_555
A
ASN
192
A
ASN
169
5
1_555
A
THR
209
A
THR
186
5
1_555
A
ASN
128
A
ASN
105
2
1_555
A
HOH
549
U
HOH
2
1_555
A
ARG
37
A
ARG
14
5
1_555
A
THR
61
A
THR
38
5
3_645
A
ILE
79
A
ILE
56
5
1_555
A
GLN
80
A
GLN
57
5
1_555
A
VAL
81
A
VAL
58
5
1_555
B
GLU
185
B
GLU
162
3
1_555
B
ALA
186
B
ALA
163
3
1_555
B
GLY
187
B
GLY
164
3
1_555
B
THR
51
B
THR
28
5
1_555
B
VAL
52
B
VAL
29
5
1_555
B
ILE
92
B
ILE
69
5
1_555
B
PHE
101
B
PHE
78
5
1_555
B
MSE
104
B
MSE
81
5
1_555
B
TYR
56
B
TYR
33
3
1_555
B
TYR
70
B
TYR
47
3
1_555
B
LYS
105
B
LYS
82
3
1_555
B
THR
65
B
THR
42
3
4_446
B
LYS
84
B
LYS
61
3
1_555
B
PHE
89
B
PHE
66
3
1_555
B
THR
170
B
THR
147
6
1_555
B
ALA
171
B
ALA
148
6
1_555
B
GLN
172
B
GLN
149
6
1_555
B
ARG
190
B
ARG
167
6
1_555
B
ASN
192
B
ASN
169
6
1_555
B
THR
209
B
THR
186
6
1_555
A
MSE
160
A
MSE
137
8
1_555
A
LYS
179
A
LYS
156
8
1_555
A
PG4
256
I
PG4
8
1_555
B
MSE
160
B
MSE
137
8
1_555
B
VAL
162
B
VAL
139
8
1_555
B
LYS
179
B
LYS
156
8
1_555
B
GLY
180
B
GLY
157
8
1_555
B
VAL
181
B
VAL
158
8
1_555
B
GLY
50
B
GLY
27
4
1_555
B
LYS
94
B
LYS
71
4
1_555
B
LYS
119
B
LYS
96
4
1_555
B
PG4
259
T
PG4
4
1_555
A
HOH
306
U
HOH
5
1_555
B
LYS
119
B
LYS
96
5
1_555
B
GLY
120
B
GLY
97
5
1_555
B
VAL
142
B
VAL
119
5
1_555
B
PG4
258
S
PG4
5
1_555
19
P 21 21 21