0.017734
0.000000
0.000000
0.000000
0.016021
0.000000
0.000000
0.000000
0.007149
0.00000
0.00000
0.00000
Bebenek, K.
Pedersen, L.C.
Kunkel, T.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
56.390
62.417
139.881
C11 H18 N5 O12 P3
505.208
2'-deoxy-5'-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]guanosine
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cl -1
35.453
CHLORIDE ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
Mn 2
54.938
MANGANESE (II) ION
non-polymer
Na 1
22.990
SODIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
N
C
N
3
N
N
N
4
N
N
Y
5
N
C
Y
6
N
C
N
7
N
C
N
8
N
O
Y
9
N
N
Y
10
N
C
Y
11
N
N
N
12
N
P
N
13
N
P
N
14
N
P
N
15
R
C
N
16
N
O
N
17
N
O
N
18
N
O
N
19
N
C
N
20
N
O
N
21
N
O
N
22
N
O
N
23
S
C
N
24
N
O
N
25
N
C
N
26
N
O
N
27
N
O
N
28
R
C
N
29
N
O
N
30
N
C
N
31
N
O
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
N
N
51
S
C
N
52
N
C
N
53
N
O
N
54
N
C
N
55
N
O
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
N
N
64
S
C
N
65
N
C
N
66
N
O
N
67
N
C
N
68
N
C
N
69
N
C
N
70
N
N
N
71
N
C
N
72
N
N
N
73
N
N
N
74
N
O
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
N
N
91
S
C
N
92
N
C
N
93
N
O
N
94
N
C
N
95
N
C
N
96
N
O
N
97
N
N
N
98
N
O
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
N
N
108
S
C
N
109
N
C
N
110
N
O
N
111
N
C
N
112
N
C
N
113
N
O
N
114
N
O
N
115
N
O
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
CL
N
124
N
N
N
125
R
C
N
126
N
C
N
127
N
O
N
128
N
C
N
129
N
S
N
130
N
O
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
O
N
139
N
P
N
140
N
O
N
141
N
O
N
142
N
O
N
143
N
C
N
144
R
C
N
145
N
O
N
146
S
C
N
147
N
O
N
148
N
C
N
149
R
C
Y
150
N
N
Y
151
N
C
Y
152
N
N
Y
153
N
C
Y
154
N
C
N
155
N
N
Y
156
N
N
Y
157
N
C
Y
158
N
N
Y
159
N
C
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
O
N
175
N
P
N
176
N
O
N
177
N
O
N
178
N
O
N
179
N
C
N
180
R
C
N
181
N
O
N
182
S
C
N
183
N
O
N
184
N
C
N
185
R
C
N
186
N
N
N
187
N
C
N
188
N
O
N
189
N
N
N
190
N
C
N
191
N
N
N
192
N
C
N
193
N
C
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
O
N
209
N
P
N
210
N
O
N
211
N
O
N
212
N
O
N
213
N
C
N
214
R
C
N
215
N
O
N
216
S
C
N
217
N
O
N
218
N
C
N
219
R
C
Y
220
N
N
Y
221
N
C
Y
222
N
N
Y
223
N
C
N
224
N
C
N
225
N
O
N
226
N
N
N
227
N
C
N
228
N
N
N
229
N
N
Y
230
N
C
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
O
N
246
N
P
N
247
N
O
N
248
N
O
N
249
N
O
N
250
N
C
N
251
R
C
N
252
N
O
N
253
S
C
N
254
N
O
N
255
N
C
N
256
R
C
N
257
N
N
N
258
N
C
N
259
N
O
N
260
N
N
N
261
N
C
N
262
N
O
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
N
N
282
S
C
N
283
N
C
N
284
N
O
N
285
N
C
N
286
N
C
N
287
N
C
N
288
N
O
N
289
N
N
N
290
N
O
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
N
N
302
S
C
N
303
N
C
N
304
N
O
N
305
N
C
N
306
N
C
N
307
N
C
N
308
N
O
N
309
N
O
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
N
N
321
N
C
N
322
N
C
N
323
N
O
N
324
N
O
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
N
N
331
S
C
N
332
N
C
N
333
N
O
N
334
N
C
Y
335
N
C
Y
336
N
N
Y
337
N
C
Y
338
N
C
Y
339
N
N
N
340
N
O
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
O
N
352
N
H
N
353
N
H
N
354
N
N
N
355
S
C
N
356
N
C
N
357
N
O
N
358
S
C
N
359
N
C
N
360
N
C
N
361
N
C
N
362
N
O
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
N
N
377
S
C
N
378
N
C
N
379
N
O
N
380
N
C
N
381
N
C
N
382
N
C
N
383
N
C
N
384
N
O
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
N
N
399
S
C
N
400
N
C
N
401
N
O
N
402
N
C
N
403
N
C
N
404
N
C
N
405
N
C
N
406
N
N
N
407
N
O
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
N
N
424
S
C
N
425
N
C
N
426
N
O
N
427
N
C
N
428
N
C
N
429
N
S
N
430
N
C
N
431
N
O
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
MG
N
444
N
MN
N
445
N
NA
N
446
N
N
N
447
S
C
N
448
N
C
N
449
N
O
N
450
N
C
Y
451
N
C
Y
452
N
C
Y
453
N
C
Y
454
N
C
Y
455
N
C
Y
456
N
C
N
457
N
O
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
N
N
470
S
C
N
471
N
C
N
472
N
O
N
473
N
C
N
474
N
C
N
475
N
C
N
476
N
O
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
N
N
487
S
C
N
488
N
C
N
489
N
O
N
490
N
C
N
491
N
O
N
492
N
O
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
N
N
501
S
C
N
502
N
C
N
503
N
O
N
504
R
C
N
505
N
O
N
506
N
C
N
507
N
O
N
508
N
H
N
509
N
H
N
510
N
H
N
511
N
H
N
512
N
H
N
513
N
H
N
514
N
H
N
515
N
H
N
516
N
H
N
517
N
N
N
518
S
C
N
519
N
C
N
520
N
O
N
521
N
C
Y
522
N
C
Y
523
N
C
Y
524
N
C
Y
525
N
N
Y
526
N
C
Y
527
N
C
Y
528
N
C
Y
529
N
C
Y
530
N
C
N
531
N
O
N
532
N
H
N
533
N
H
N
534
N
H
N
535
N
H
N
536
N
H
N
537
N
H
N
538
N
H
N
539
N
H
N
540
N
H
N
541
N
H
N
542
N
H
N
543
N
H
N
544
N
N
N
545
S
C
N
546
N
C
N
547
N
O
N
548
N
C
Y
549
N
C
Y
550
N
C
Y
551
N
C
Y
552
N
C
Y
553
N
C
Y
554
N
C
N
555
N
O
N
556
N
O
N
557
N
H
N
558
N
H
N
559
N
H
N
560
N
H
N
561
N
H
N
562
N
H
N
563
N
H
N
564
N
H
N
565
N
H
N
566
N
H
N
567
N
H
N
568
N
N
N
569
S
C
N
570
N
C
N
571
N
O
N
572
N
C
N
573
N
C
N
574
N
C
N
575
N
O
N
576
N
H
N
577
N
H
N
578
N
H
N
579
N
H
N
580
N
H
N
581
N
H
N
582
N
H
N
583
N
H
N
584
N
H
N
585
N
H
N
586
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
doub
N
6
N
sing
N
7
N
sing
N
8
N
sing
Y
9
N
sing
Y
10
N
doub
N
11
N
sing
Y
12
N
sing
N
13
N
doub
Y
14
N
doub
Y
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
doub
N
21
N
sing
N
22
N
doub
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
doub
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
doub
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
doub
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
doub
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
doub
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
doub
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
doub
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
doub
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
Y
157
N
sing
Y
158
N
sing
Y
159
N
doub
N
160
N
sing
Y
161
N
sing
Y
162
N
sing
Y
163
N
doub
N
164
N
sing
Y
165
N
doub
N
166
N
sing
N
167
N
sing
Y
168
N
sing
Y
169
N
doub
N
170
N
sing
Y
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
doub
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
doub
N
198
N
sing
N
199
N
doub
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
doub
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
Y
230
N
sing
Y
231
N
sing
Y
232
N
doub
N
233
N
sing
Y
234
N
sing
N
235
N
sing
Y
236
N
doub
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
doub
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
doub
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
doub
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
doub
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
doub
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
doub
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
doub
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
doub
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
doub
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
doub
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
Y
340
N
sing
Y
341
N
doub
Y
342
N
doub
N
343
N
sing
Y
344
N
sing
N
345
N
sing
Y
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
doub
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
doub
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
doub
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
doub
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
doub
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
Y
448
N
doub
Y
449
N
sing
Y
450
N
sing
N
451
N
sing
Y
452
N
doub
N
453
N
sing
Y
454
N
doub
N
455
N
sing
Y
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
doub
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
doub
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
doub
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
sing
N
501
N
sing
N
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
N
512
N
doub
N
513
N
sing
N
514
N
sing
N
515
N
sing
N
516
N
sing
Y
517
N
doub
Y
518
N
sing
Y
519
N
sing
N
520
N
sing
Y
521
N
doub
Y
522
N
sing
Y
523
N
sing
N
524
N
sing
Y
525
N
sing
Y
526
N
doub
N
527
N
sing
Y
528
N
doub
N
529
N
sing
Y
530
N
sing
N
531
N
sing
N
532
N
sing
N
533
N
sing
N
534
N
sing
N
535
N
sing
N
536
N
sing
N
537
N
sing
N
538
N
sing
N
539
N
sing
N
540
N
doub
N
541
N
sing
N
542
N
sing
N
543
N
sing
N
544
N
sing
Y
545
N
doub
Y
546
N
sing
Y
547
N
sing
N
548
N
sing
Y
549
N
doub
N
550
N
sing
Y
551
N
doub
N
552
N
sing
Y
553
N
sing
N
554
N
sing
N
555
N
sing
N
556
N
sing
N
557
N
sing
N
558
N
sing
N
559
N
sing
N
560
N
sing
N
561
N
sing
N
562
N
sing
N
563
N
sing
N
564
N
doub
N
565
N
sing
N
566
N
sing
N
567
N
sing
N
568
N
sing
N
569
N
sing
N
570
N
sing
N
571
N
sing
N
572
N
sing
N
573
N
sing
N
574
N
sing
N
575
N
sing
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
108
1862
1867
10.1073/pnas.1012825108
21233421
Replication infidelity via a mismatch with Watson-Crick geometry.
2011
10.2210/pdb3pmn/pdb
pdb_00003pmn
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
Varimax-HF
CCD
2008-11-20
RIGAKU SATURN 92
NA
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU MICROMAX-007 HF
36736.039
DNA polymerase lambda
2.7.7.7, 4.2.99.-
UNP residues 242-575
1
man
polymer
template DNA
3325.172
5'-D(*CP*GP*GP*CP*CP*TP*TP*AP*CP*TP*G)-3'
1
syn
polymer
primer DNA
1833.242
5'-D(*CP*AP*GP*TP*AP*G)-3'
1
syn
polymer
downstream DNA
1191.818
5'-D(*GP*CP*CP*G)-3'
1
syn
polymer
505.208
2'-deoxy-5'-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]guanosine
1
syn
non-polymer
24.305
MAGNESIUM ION
1
syn
non-polymer
54.938
MANGANESE (II) ION
3
syn
non-polymer
22.990
SODIUM ION
2
syn
non-polymer
35.453
CHLORIDE ION
2
syn
non-polymer
18.015
water
202
nat
water
Pol Lambda, DNA polymerase beta-2, Pol beta2, DNA polymerase kappa
no
no
AQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGH
LRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQK
AAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVKGETKYLGVCRLPGPGRRH
RRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLP
YREPAERDW
AQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGH
LRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQK
AAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVKGETKYLGVCRLPGPGRRH
RRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLP
YREPAERDW
A
polypeptide(L)
no
no
(DC)(DG)(DG)(DC)(DC)(DT)(DT)(DA)(DC)(DT)(DG)
CGGCCTTACTG
B
polydeoxyribonucleotide
no
no
(DC)(DA)(DG)(DT)(DA)(DG)
CAGTAG
C
polydeoxyribonucleotide
no
no
(DG)(DC)(DC)(DG)
GCCG
D
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
POLL
9606
Homo sapiens
469008
Escherichia coli
BL21(DE3)RIL
Plasmid
PET22
1
2.86
56.94
VAPOR DIFFUSION, SITTING DROP
7.5
2M formate, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
277
-11.401
1
19
B
1
D
4
-4.027
B_DC1:DG4_D
1
-1.589
-0.402
0.127
-0.179
7.696
1
19
B
2
D
3
-0.875
B_DG2:DC3_D
2
1.203
0.085
-0.086
-0.328
9.141
1
19
B
3
D
2
-0.802
B_DG3:DC2_D
3
0.098
-0.320
0.007
-0.042
15.607
1
19
B
4
D
1
1.116
B_DC4:DG1_D
4
-11.802
0.363
-0.134
-0.108
-4.211
1
28
B
6
C
6
-0.132
B_DT6:DG6_C
5
-8.628
2.148
0.422
-0.488
5.087
1
20
B
7
C
5
1.232
B_DT7:DA5_C
6
-10.273
-0.257
-0.020
-0.123
3.256
1
20
B
8
C
4
-0.299
B_DA8:DT4_C
7
-1.471
0.100
0.124
-0.152
1.327
1
19
B
9
C
3
-2.597
B_DC9:DG3_C
8
-11.541
0.015
0.470
-0.054
5.223
1
20
B
10
C
2
2.037
B_DT10:DA2_C
9
-10.806
0.008
0.071
-0.065
20.752
1
19
B
11
C
1
-1.295
B_DG11:DC1_C
10
-16.478
-0.044
0.529
-0.254
3.015
33.740
B
B
1
2
5.350
D
D
4
3
2.920
3.097
1.042
0.299
BB_DC1DG2:DC3DG4_DD
1
3.058
-5.282
33.466
0.058
-1.344
3.388
34.660
B
B
2
3
2.049
D
D
3
2
3.355
1.219
-0.646
-0.096
BB_DG2DG3:DC2DC3_DD
2
-2.598
4.365
34.545
-0.355
0.673
2.988
36.028
B
B
3
4
9.352
D
D
2
1
3.201
5.760
0.511
-1.014
BB_DG3DC4:DG1DC2_DD
3
-1.163
1.888
35.561
-2.418
-0.984
2.888
24.680
B
B
6
7
11.479
C
C
6
5
3.063
4.862
0.366
-0.708
BB_DT6DT7:DA5DG6_CC
4
3.106
-7.333
24.006
-3.026
0.019
3.017
31.576
B
B
7
8
13.056
C
C
5
4
3.243
7.038
-0.440
-0.801
BB_DT7DA8:DT4DA5_CC
5
-2.779
5.155
30.678
-2.740
0.307
3.392
32.864
B
B
8
9
3.503
C
C
4
3
3.350
1.976
-0.864
-0.553
BB_DA8DC9:DG3DT4_CC
6
-4.053
7.186
32.561
-1.328
0.810
3.120
33.495
B
B
9
10
3.843
C
C
3
2
3.186
2.210
-0.187
-0.398
BB_DC9DT10:DA2DG3_CC
7
3.395
-5.904
33.257
-1.043
0.866
2.919
35.023
B
B
10
11
22.262
C
C
2
1
2.994
13.073
0.380
0.482
BB_DT10DG11:DC1DA2_CC
8
-3.161
5.383
32.413
-1.051
-1.079
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Data collection
Database references
Derived calculations
1
0
2011-02-02
1
1
2011-07-13
1
2
2024-02-21
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Author states that polymerase lambda loop residues from 463 to 471 (SQEENGQQQ) are replaced by residues "KGET"
RCSB
Y
RCSB
2010-11-17
REL
REL
1GC
2'-deoxy-5'-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]guanosine
MG
MAGNESIUM ION
MN
MANGANESE (II) ION
NA
SODIUM ION
CL
CHLORIDE ION
HOH
water
1GC
1
5
1GC
1GC
1
A
MG
1
6
MG
MG
576
A
MN
2
7
MN
MN
2
A
NA
5
8
NA
NA
5
A
MN
6
7
MN
MN
6
A
MN
7
7
MN
MN
7
A
CL
8
9
CL
CL
8
A
CL
9
9
CL
CL
9
A
NA
10
8
NA
NA
10
A
TIP
3
10
HOH
HOH
3
A
TIP
4
10
HOH
HOH
4
A
TIP
12
10
HOH
HOH
12
A
TIP
13
10
HOH
HOH
13
A
TIP
14
10
HOH
HOH
14
A
TIP
16
10
HOH
HOH
16
A
TIP
17
10
HOH
HOH
17
A
TIP
19
10
HOH
HOH
19
A
TIP
21
10
HOH
HOH
21
A
TIP
22
10
HOH
HOH
22
A
TIP
24
10
HOH
HOH
24
A
TIP
25
10
HOH
HOH
25
A
TIP
26
10
HOH
HOH
26
A
TIP
27
10
HOH
HOH
27
A
TIP
29
10
HOH
HOH
29
A
TIP
30
10
HOH
HOH
30
A
TIP
31
10
HOH
HOH
31
A
TIP
33
10
HOH
HOH
33
A
TIP
34
10
HOH
HOH
34
A
TIP
35
10
HOH
HOH
35
A
TIP
37
10
HOH
HOH
37
A
TIP
38
10
HOH
HOH
38
A
TIP
39
10
HOH
HOH
39
A
TIP
40
10
HOH
HOH
40
A
TIP
41
10
HOH
HOH
41
A
TIP
42
10
HOH
HOH
42
A
TIP
43
10
HOH
HOH
43
A
TIP
44
10
HOH
HOH
44
A
TIP
45
10
HOH
HOH
45
A
TIP
47
10
HOH
HOH
47
A
TIP
49
10
HOH
HOH
49
A
TIP
53
10
HOH
HOH
53
A
TIP
55
10
HOH
HOH
55
A
TIP
56
10
HOH
HOH
56
A
TIP
58
10
HOH
HOH
58
A
TIP
59
10
HOH
HOH
59
A
TIP
60
10
HOH
HOH
60
A
TIP
61
10
HOH
HOH
61
A
TIP
62
10
HOH
HOH
62
A
TIP
63
10
HOH
HOH
63
A
TIP
64
10
HOH
HOH
64
A
TIP
67
10
HOH
HOH
67
A
TIP
68
10
HOH
HOH
68
A
TIP
69
10
HOH
HOH
69
A
TIP
70
10
HOH
HOH
70
A
TIP
71
10
HOH
HOH
71
A
TIP
73
10
HOH
HOH
73
A
TIP
74
10
HOH
HOH
74
A
TIP
76
10
HOH
HOH
76
A
TIP
77
10
HOH
HOH
77
A
TIP
78
10
HOH
HOH
78
A
TIP
79
10
HOH
HOH
79
A
TIP
81
10
HOH
HOH
81
A
TIP
82
10
HOH
HOH
82
A
TIP
83
10
HOH
HOH
83
A
TIP
84
10
HOH
HOH
84
A
TIP
85
10
HOH
HOH
85
A
TIP
86
10
HOH
HOH
86
A
TIP
87
10
HOH
HOH
87
A
TIP
89
10
HOH
HOH
89
A
TIP
91
10
HOH
HOH
91
A
TIP
92
10
HOH
HOH
92
A
TIP
93
10
HOH
HOH
93
A
TIP
94
10
HOH
HOH
94
A
TIP
97
10
HOH
HOH
97
A
TIP
98
10
HOH
HOH
98
A
TIP
100
10
HOH
HOH
100
A
TIP
103
10
HOH
HOH
103
A
TIP
107
10
HOH
HOH
107
A
TIP
109
10
HOH
HOH
109
A
TIP
110
10
HOH
HOH
110
A
TIP
112
10
HOH
HOH
112
A
TIP
113
10
HOH
HOH
113
A
TIP
114
10
HOH
HOH
114
A
TIP
115
10
HOH
HOH
115
A
TIP
116
10
HOH
HOH
116
A
TIP
117
10
HOH
HOH
117
A
TIP
120
10
HOH
HOH
120
A
TIP
121
10
HOH
HOH
121
A
TIP
122
10
HOH
HOH
122
A
TIP
123
10
HOH
HOH
123
A
TIP
124
10
HOH
HOH
124
A
TIP
127
10
HOH
HOH
127
A
TIP
1
10
HOH
HOH
577
A
TIP
2
10
HOH
HOH
578
A
TIP
7
10
HOH
HOH
579
A
TIP
8
10
HOH
HOH
580
A
TIP
300
10
HOH
HOH
581
A
TIP
302
10
HOH
HOH
582
A
TIP
304
10
HOH
HOH
583
A
TIP
305
10
HOH
HOH
584
A
TIP
306
10
HOH
HOH
585
A
TIP
307
10
HOH
HOH
586
A
TIP
308
10
HOH
HOH
587
A
TIP
310
10
HOH
HOH
588
A
TIP
312
10
HOH
HOH
589
A
TIP
313
10
HOH
HOH
590
A
TIP
314
10
HOH
HOH
591
A
TIP
315
10
HOH
HOH
592
A
TIP
316
10
HOH
HOH
593
A
TIP
317
10
HOH
HOH
594
A
TIP
318
10
HOH
HOH
595
A
TIP
319
10
HOH
HOH
596
A
TIP
320
10
HOH
HOH
597
A
TIP
321
10
HOH
HOH
598
A
TIP
322
10
HOH
HOH
599
A
TIP
323
10
HOH
HOH
600
A
TIP
324
10
HOH
HOH
601
A
TIP
326
10
HOH
HOH
602
A
TIP
328
10
HOH
HOH
603
A
TIP
329
10
HOH
HOH
604
A
TIP
330
10
HOH
HOH
605
A
TIP
331
10
HOH
HOH
606
A
TIP
332
10
HOH
HOH
607
A
TIP
350
10
HOH
HOH
608
A
TIP
351
10
HOH
HOH
609
A
TIP
352
10
HOH
HOH
610
A
TIP
353
10
HOH
HOH
611
A
TIP
354
10
HOH
HOH
612
A
TIP
400
10
HOH
HOH
613
A
TIP
401
10
HOH
HOH
614
A
TIP
402
10
HOH
HOH
615
A
TIP
403
10
HOH
HOH
616
A
TIP
404
10
HOH
HOH
617
A
TIP
406
10
HOH
HOH
618
A
TIP
407
10
HOH
HOH
619
A
TIP
408
10
HOH
HOH
620
A
TIP
409
10
HOH
HOH
621
A
TIP
410
10
HOH
HOH
622
A
TIP
411
10
HOH
HOH
623
A
TIP
412
10
HOH
HOH
624
A
TIP
413
10
HOH
HOH
625
A
TIP
414
10
HOH
HOH
626
A
TIP
415
10
HOH
HOH
627
A
TIP
416
10
HOH
HOH
628
A
TIP
419
10
HOH
HOH
629
A
TIP
420
10
HOH
HOH
630
A
TIP
421
10
HOH
HOH
631
A
TIP
426
10
HOH
HOH
632
A
TIP
427
10
HOH
HOH
633
A
TIP
428
10
HOH
HOH
634
A
TIP
429
10
HOH
HOH
635
A
TIP
430
10
HOH
HOH
636
A
TIP
431
10
HOH
HOH
637
A
TIP
432
10
HOH
HOH
638
A
TIP
433
10
HOH
HOH
639
A
TIP
6
10
HOH
HOH
12
B
TIP
18
10
HOH
HOH
18
B
TIP
23
10
HOH
HOH
23
B
TIP
28
10
HOH
HOH
28
B
TIP
32
10
HOH
HOH
32
B
TIP
46
10
HOH
HOH
46
B
TIP
48
10
HOH
HOH
48
B
TIP
52
10
HOH
HOH
52
B
TIP
54
10
HOH
HOH
54
B
TIP
65
10
HOH
HOH
65
B
TIP
75
10
HOH
HOH
75
B
TIP
101
10
HOH
HOH
101
B
TIP
104
10
HOH
HOH
104
B
TIP
105
10
HOH
HOH
105
B
TIP
111
10
HOH
HOH
111
B
TIP
118
10
HOH
HOH
118
B
TIP
125
10
HOH
HOH
125
B
TIP
128
10
HOH
HOH
128
B
TIP
129
10
HOH
HOH
129
B
TIP
327
10
HOH
HOH
327
B
TIP
362
10
HOH
HOH
362
B
TIP
363
10
HOH
HOH
363
B
TIP
364
10
HOH
HOH
364
B
TIP
405
10
HOH
HOH
405
B
TIP
418
10
HOH
HOH
418
B
TIP
424
10
HOH
HOH
424
B
TIP
425
10
HOH
HOH
425
B
TIP
5
10
HOH
HOH
7
C
TIP
9
10
HOH
HOH
9
C
TIP
10
10
HOH
HOH
10
C
TIP
15
10
HOH
HOH
15
C
TIP
20
10
HOH
HOH
20
C
TIP
36
10
HOH
HOH
36
C
TIP
50
10
HOH
HOH
50
C
TIP
51
10
HOH
HOH
51
C
TIP
57
10
HOH
HOH
57
C
TIP
66
10
HOH
HOH
66
C
TIP
72
10
HOH
HOH
72
C
TIP
88
10
HOH
HOH
88
C
TIP
90
10
HOH
HOH
90
C
TIP
95
10
HOH
HOH
95
C
TIP
96
10
HOH
HOH
96
C
TIP
99
10
HOH
HOH
99
C
TIP
303
10
HOH
HOH
303
C
TIP
360
10
HOH
HOH
360
C
TIP
361
10
HOH
HOH
361
C
TIP
422
10
HOH
HOH
422
C
TIP
423
10
HOH
HOH
423
C
TIP
80
10
HOH
HOH
80
D
TIP
102
10
HOH
HOH
102
D
TIP
106
10
HOH
HOH
106
D
TIP
108
10
HOH
HOH
108
D
TIP
365
10
HOH
HOH
365
D
TIP
366
10
HOH
HOH
366
D
TIP
367
10
HOH
HOH
367
D
TIP
368
10
HOH
HOH
368
D
n
1
242
A
n
2
243
A
n
3
244
A
n
4
245
A
n
5
246
A
n
6
247
A
n
7
248
A
ALA
249
n
8
ALA
249
A
THR
250
n
9
THR
250
A
ASN
251
n
10
ASN
251
A
HIS
252
n
11
HIS
252
A
ASN
253
n
12
ASN
253
A
LEU
254
n
13
LEU
254
A
HIS
255
n
14
HIS
255
A
ILE
256
n
15
ILE
256
A
THR
257
n
16
THR
257
A
GLU
258
n
17
GLU
258
A
LYS
259
n
18
LYS
259
A
LEU
260
n
19
LEU
260
A
GLU
261
n
20
GLU
261
A
VAL
262
n
21
VAL
262
A
LEU
263
n
22
LEU
263
A
ALA
264
n
23
ALA
264
A
LYS
265
n
24
LYS
265
A
ALA
266
n
25
ALA
266
A
TYR
267
n
26
TYR
267
A
SER
268
n
27
SER
268
A
VAL
269
n
28
VAL
269
A
GLN
270
n
29
GLN
270
A
GLY
271
n
30
GLY
271
A
ASP
272
n
31
ASP
272
A
LYS
273
n
32
LYS
273
A
TRP
274
n
33
TRP
274
A
ARG
275
n
34
ARG
275
A
ALA
276
n
35
ALA
276
A
LEU
277
n
36
LEU
277
A
GLY
278
n
37
GLY
278
A
TYR
279
n
38
TYR
279
A
ALA
280
n
39
ALA
280
A
LYS
281
n
40
LYS
281
A
ALA
282
n
41
ALA
282
A
ILE
283
n
42
ILE
283
A
ASN
284
n
43
ASN
284
A
ALA
285
n
44
ALA
285
A
LEU
286
n
45
LEU
286
A
LYS
287
n
46
LYS
287
A
SER
288
n
47
SER
288
A
PHE
289
n
48
PHE
289
A
HIS
290
n
49
HIS
290
A
LYS
291
n
50
LYS
291
A
PRO
292
n
51
PRO
292
A
VAL
293
n
52
VAL
293
A
THR
294
n
53
THR
294
A
SER
295
n
54
SER
295
A
TYR
296
n
55
TYR
296
A
GLN
297
n
56
GLN
297
A
GLU
298
n
57
GLU
298
A
ALA
299
n
58
ALA
299
A
CYS
300
n
59
CYS
300
A
SER
301
n
60
SER
301
A
ILE
302
n
61
ILE
302
A
PRO
303
n
62
PRO
303
A
GLY
304
n
63
GLY
304
A
ILE
305
n
64
ILE
305
A
GLY
306
n
65
GLY
306
A
LYS
307
n
66
LYS
307
A
ARG
308
n
67
ARG
308
A
MET
309
n
68
MET
309
A
ALA
310
n
69
ALA
310
A
GLU
311
n
70
GLU
311
A
LYS
312
n
71
LYS
312
A
ILE
313
n
72
ILE
313
A
ILE
314
n
73
ILE
314
A
GLU
315
n
74
GLU
315
A
ILE
316
n
75
ILE
316
A
LEU
317
n
76
LEU
317
A
GLU
318
n
77
GLU
318
A
SER
319
n
78
SER
319
A
GLY
320
n
79
GLY
320
A
HIS
321
n
80
HIS
321
A
LEU
322
n
81
LEU
322
A
ARG
323
n
82
ARG
323
A
LYS
324
n
83
LYS
324
A
LEU
325
n
84
LEU
325
A
ASP
326
n
85
ASP
326
A
HIS
327
n
86
HIS
327
A
ILE
328
n
87
ILE
328
A
SER
329
n
88
SER
329
A
GLU
330
n
89
GLU
330
A
SER
331
n
90
SER
331
A
VAL
332
n
91
VAL
332
A
PRO
333
n
92
PRO
333
A
VAL
334
n
93
VAL
334
A
LEU
335
n
94
LEU
335
A
GLU
336
n
95
GLU
336
A
LEU
337
n
96
LEU
337
A
PHE
338
n
97
PHE
338
A
SER
339
n
98
SER
339
A
ASN
340
n
99
ASN
340
A
ILE
341
n
100
ILE
341
A
TRP
342
n
101
TRP
342
A
GLY
343
n
102
GLY
343
A
ALA
344
n
103
ALA
344
A
GLY
345
n
104
GLY
345
A
THR
346
n
105
THR
346
A
LYS
347
n
106
LYS
347
A
THR
348
n
107
THR
348
A
ALA
349
n
108
ALA
349
A
GLN
350
n
109
GLN
350
A
MET
351
n
110
MET
351
A
TRP
352
n
111
TRP
352
A
TYR
353
n
112
TYR
353
A
GLN
354
n
113
GLN
354
A
GLN
355
n
114
GLN
355
A
GLY
356
n
115
GLY
356
A
PHE
357
n
116
PHE
357
A
ARG
358
n
117
ARG
358
A
SER
359
n
118
SER
359
A
LEU
360
n
119
LEU
360
A
GLU
361
n
120
GLU
361
A
ASP
362
n
121
ASP
362
A
ILE
363
n
122
ILE
363
A
ARG
364
n
123
ARG
364
A
SER
365
n
124
SER
365
A
GLN
366
n
125
GLN
366
A
ALA
367
n
126
ALA
367
A
SER
368
n
127
SER
368
A
LEU
369
n
128
LEU
369
A
THR
370
n
129
THR
370
A
THR
371
n
130
THR
371
A
GLN
372
n
131
GLN
372
A
GLN
373
n
132
GLN
373
A
ALA
374
n
133
ALA
374
A
ILE
375
n
134
ILE
375
A
GLY
376
n
135
GLY
376
A
LEU
377
n
136
LEU
377
A
LYS
378
n
137
LYS
378
A
HIS
379
n
138
HIS
379
A
TYR
380
n
139
TYR
380
A
SER
381
n
140
SER
381
A
ASP
382
n
141
ASP
382
A
PHE
383
n
142
PHE
383
A
LEU
384
n
143
LEU
384
A
GLU
385
n
144
GLU
385
A
ARG
386
n
145
ARG
386
A
MET
387
n
146
MET
387
A
PRO
388
n
147
PRO
388
A
ARG
389
n
148
ARG
389
A
GLU
390
n
149
GLU
390
A
GLU
391
n
150
GLU
391
A
ALA
392
n
151
ALA
392
A
THR
393
n
152
THR
393
A
GLU
394
n
153
GLU
394
A
ILE
395
n
154
ILE
395
A
GLU
396
n
155
GLU
396
A
GLN
397
n
156
GLN
397
A
THR
398
n
157
THR
398
A
VAL
399
n
158
VAL
399
A
GLN
400
n
159
GLN
400
A
LYS
401
n
160
LYS
401
A
ALA
402
n
161
ALA
402
A
ALA
403
n
162
ALA
403
A
GLN
404
n
163
GLN
404
A
ALA
405
n
164
ALA
405
A
PHE
406
n
165
PHE
406
A
ASN
407
n
166
ASN
407
A
SER
408
n
167
SER
408
A
GLY
409
n
168
GLY
409
A
LEU
410
n
169
LEU
410
A
LEU
411
n
170
LEU
411
A
CYS
412
n
171
CYS
412
A
VAL
413
n
172
VAL
413
A
ALA
414
n
173
ALA
414
A
CYS
415
n
174
CYS
415
A
GLY
416
n
175
GLY
416
A
SER
417
n
176
SER
417
A
TYR
418
n
177
TYR
418
A
ARG
419
n
178
ARG
419
A
ARG
420
n
179
ARG
420
A
GLY
421
n
180
GLY
421
A
LYS
422
n
181
LYS
422
A
ALA
423
n
182
ALA
423
A
THR
424
n
183
THR
424
A
CYS
425
n
184
CYS
425
A
GLY
426
n
185
GLY
426
A
ASP
427
n
186
ASP
427
A
VAL
428
n
187
VAL
428
A
ASP
429
n
188
ASP
429
A
VAL
430
n
189
VAL
430
A
LEU
431
n
190
LEU
431
A
ILE
432
n
191
ILE
432
A
THR
433
n
192
THR
433
A
HIS
434
n
193
HIS
434
A
PRO
435
n
194
PRO
435
A
ASP
436
n
195
ASP
436
A
GLY
437
n
196
GLY
437
A
ARG
438
n
197
ARG
438
A
SER
439
n
198
SER
439
A
HIS
440
n
199
HIS
440
A
ARG
441
n
200
ARG
441
A
GLY
442
n
201
GLY
442
A
ILE
443
n
202
ILE
443
A
PHE
444
n
203
PHE
444
A
SER
445
n
204
SER
445
A
ARG
446
n
205
ARG
446
A
LEU
447
n
206
LEU
447
A
LEU
448
n
207
LEU
448
A
ASP
449
n
208
ASP
449
A
SER
450
n
209
SER
450
A
LEU
451
n
210
LEU
451
A
ARG
452
n
211
ARG
452
A
GLN
453
n
212
GLN
453
A
GLU
454
n
213
GLU
454
A
GLY
455
n
214
GLY
455
A
PHE
456
n
215
PHE
456
A
LEU
457
n
216
LEU
457
A
THR
458
n
217
THR
458
A
ASP
459
n
218
ASP
459
A
ASP
460
n
219
ASP
460
A
LEU
461
n
220
LEU
461
A
VAL
462
n
221
VAL
462
A
LYS
463
n
222
LYS
463
A
GLY
464
n
223
GLY
464
A
GLU
470
n
224
GLU
470
A
THR
471
n
225
THR
471
A
LYS
472
n
226
LYS
472
A
TYR
473
n
227
TYR
473
A
LEU
474
n
228
LEU
474
A
GLY
475
n
229
GLY
475
A
VAL
476
n
230
VAL
476
A
CYS
477
n
231
CYS
477
A
ARG
478
n
232
ARG
478
A
LEU
479
n
233
LEU
479
A
PRO
480
n
234
PRO
480
A
GLY
481
n
235
GLY
481
A
PRO
482
n
236
PRO
482
A
GLY
483
n
237
GLY
483
A
ARG
484
n
238
ARG
484
A
ARG
485
n
239
ARG
485
A
HIS
486
n
240
HIS
486
A
ARG
487
n
241
ARG
487
A
ARG
488
n
242
ARG
488
A
LEU
489
n
243
LEU
489
A
ASP
490
n
244
ASP
490
A
ILE
491
n
245
ILE
491
A
ILE
492
n
246
ILE
492
A
VAL
493
n
247
VAL
493
A
VAL
494
n
248
VAL
494
A
PRO
495
n
249
PRO
495
A
TYR
496
n
250
TYR
496
A
SER
497
n
251
SER
497
A
GLU
498
n
252
GLU
498
A
PHE
499
n
253
PHE
499
A
ALA
500
n
254
ALA
500
A
CYS
501
n
255
CYS
501
A
ALA
502
n
256
ALA
502
A
LEU
503
n
257
LEU
503
A
LEU
504
n
258
LEU
504
A
TYR
505
n
259
TYR
505
A
PHE
506
n
260
PHE
506
A
THR
507
n
261
THR
507
A
GLY
508
n
262
GLY
508
A
SER
509
n
263
SER
509
A
ALA
510
n
264
ALA
510
A
HIS
511
n
265
HIS
511
A
PHE
512
n
266
PHE
512
A
ASN
513
n
267
ASN
513
A
ARG
514
n
268
ARG
514
A
SER
515
n
269
SER
515
A
MET
516
n
270
MET
516
A
ARG
517
n
271
ARG
517
A
ALA
518
n
272
ALA
518
A
LEU
519
n
273
LEU
519
A
ALA
520
n
274
ALA
520
A
LYS
521
n
275
LYS
521
A
THR
522
n
276
THR
522
A
LYS
523
n
277
LYS
523
A
GLY
524
n
278
GLY
524
A
MET
525
n
279
MET
525
A
SER
526
n
280
SER
526
A
LEU
527
n
281
LEU
527
A
SER
528
n
282
SER
528
A
GLU
529
n
283
GLU
529
A
HIS
530
n
284
HIS
530
A
ALA
531
n
285
ALA
531
A
LEU
532
n
286
LEU
532
A
SER
533
n
287
SER
533
A
THR
534
n
288
THR
534
A
ALA
535
n
289
ALA
535
A
VAL
536
n
290
VAL
536
A
n
291
537
A
n
292
538
A
n
293
539
A
n
294
540
A
n
295
541
A
n
296
542
A
n
297
543
A
n
298
544
A
n
299
545
A
n
300
546
A
PRO
547
n
301
PRO
547
A
GLY
548
n
302
GLY
548
A
ARG
549
n
303
ARG
549
A
VAL
550
n
304
VAL
550
A
LEU
551
n
305
LEU
551
A
PRO
552
n
306
PRO
552
A
THR
553
n
307
THR
553
A
PRO
554
n
308
PRO
554
A
THR
555
n
309
THR
555
A
GLU
556
n
310
GLU
556
A
LYS
557
n
311
LYS
557
A
ASP
558
n
312
ASP
558
A
VAL
559
n
313
VAL
559
A
PHE
560
n
314
PHE
560
A
ARG
561
n
315
ARG
561
A
LEU
562
n
316
LEU
562
A
LEU
563
n
317
LEU
563
A
GLY
564
n
318
GLY
564
A
LEU
565
n
319
LEU
565
A
PRO
566
n
320
PRO
566
A
TYR
567
n
321
TYR
567
A
ARG
568
n
322
ARG
568
A
GLU
569
n
323
GLU
569
A
PRO
570
n
324
PRO
570
A
ALA
571
n
325
ALA
571
A
GLU
572
n
326
GLU
572
A
ARG
573
n
327
ARG
573
A
ASP
574
n
328
ASP
574
A
TRP
575
n
329
TRP
575
A
DC
1
n
1
DC
1
B
DG
2
n
2
DG
2
B
DG
3
n
3
DG
3
B
DC
4
n
4
DC
4
B
DC
5
n
5
DC
5
B
DT
6
n
6
DT
6
B
DT
7
n
7
DT
7
B
DA
8
n
8
DA
8
B
DC
9
n
9
DC
9
B
DT
10
n
10
DT
10
B
DG
11
n
11
DG
11
B
DC
1
n
1
DC
1
C
DA
2
n
2
DA
2
C
DG
3
n
3
DG
3
C
DT
4
n
4
DT
4
C
DA
5
n
5
DA
5
C
DG
6
n
6
DG
6
C
DG
1
n
1
DG
1
D
DC
2
n
2
DC
2
D
DC
3
n
3
DC
3
D
DG
4
n
4
DG
4
D
author_and_software_defined_assembly
PISA
4
tetrameric
5230
-92
17010
A
1GC
1
E
O2A
1GC
1_555
A
MN
2
G
MN
MN
1_555
A
ASP
427
A
OD1
ASP
186
1_555
90.6
A
1GC
1
E
O2A
1GC
1_555
A
MN
2
G
MN
MN
1_555
A
ASP
429
A
OD2
ASP
188
1_555
86.1
A
ASP
427
A
OD1
ASP
186
1_555
A
MN
2
G
MN
MN
1_555
A
ASP
429
A
OD2
ASP
188
1_555
100.4
A
1GC
1
E
O2A
1GC
1_555
A
MN
2
G
MN
MN
1_555
A
ASP
490
A
OD2
ASP
244
1_555
172.6
A
ASP
427
A
OD1
ASP
186
1_555
A
MN
2
G
MN
MN
1_555
A
ASP
490
A
OD2
ASP
244
1_555
95.4
A
ASP
429
A
OD2
ASP
188
1_555
A
MN
2
G
MN
MN
1_555
A
ASP
490
A
OD2
ASP
244
1_555
97.0
A
1GC
1
E
O2A
1GC
1_555
A
MN
2
G
MN
MN
1_555
A
HOH
577
N
O
HOH
1_555
83.7
A
ASP
427
A
OD1
ASP
186
1_555
A
MN
2
G
MN
MN
1_555
A
HOH
577
N
O
HOH
1_555
84.3
A
ASP
429
A
OD2
ASP
188
1_555
A
MN
2
G
MN
MN
1_555
A
HOH
577
N
O
HOH
1_555
168.8
A
ASP
490
A
OD2
ASP
244
1_555
A
MN
2
G
MN
MN
1_555
A
HOH
577
N
O
HOH
1_555
92.6
A
1GC
1
E
O2A
1GC
1_555
A
MN
2
G
MN
MN
1_555
C
DG
6
C
O3'
DG
6
1_555
95.7
A
ASP
427
A
OD1
ASP
186
1_555
A
MN
2
G
MN
MN
1_555
C
DG
6
C
O3'
DG
6
1_555
170.3
A
ASP
429
A
OD2
ASP
188
1_555
A
MN
2
G
MN
MN
1_555
C
DG
6
C
O3'
DG
6
1_555
87.4
A
ASP
490
A
OD2
ASP
244
1_555
A
MN
2
G
MN
MN
1_555
C
DG
6
C
O3'
DG
6
1_555
77.8
A
HOH
577
N
O
HOH
1_555
A
MN
2
G
MN
MN
1_555
C
DG
6
C
O3'
DG
6
1_555
89.1
A
1GC
1
E
O2A
1GC
1_555
A
MG
576
F
MG
MG
1_555
A
1GC
1
E
O1G
1GC
1_555
102.1
A
1GC
1
E
O2A
1GC
1_555
A
MG
576
F
MG
MG
1_555
A
1GC
1
E
O2B
1GC
1_555
87.7
A
1GC
1
E
O1G
1GC
1_555
A
MG
576
F
MG
MG
1_555
A
1GC
1
E
O2B
1GC
1_555
86.2
A
1GC
1
E
O2A
1GC
1_555
A
MG
576
F
MG
MG
1_555
A
ASP
427
A
OD2
ASP
186
1_555
107.6
A
1GC
1
E
O1G
1GC
1_555
A
MG
576
F
MG
MG
1_555
A
ASP
427
A
OD2
ASP
186
1_555
92.2
A
1GC
1
E
O2B
1GC
1_555
A
MG
576
F
MG
MG
1_555
A
ASP
427
A
OD2
ASP
186
1_555
164.6
A
1GC
1
E
O2A
1GC
1_555
A
MG
576
F
MG
MG
1_555
A
ASP
429
A
OD1
ASP
188
1_555
88.6
A
1GC
1
E
O1G
1GC
1_555
A
MG
576
F
MG
MG
1_555
A
ASP
429
A
OD1
ASP
188
1_555
166.9
A
1GC
1
E
O2B
1GC
1_555
A
MG
576
F
MG
MG
1_555
A
ASP
429
A
OD1
ASP
188
1_555
86.6
A
ASP
427
A
OD2
ASP
186
1_555
A
MG
576
F
MG
MG
1_555
A
ASP
429
A
OD1
ASP
188
1_555
91.8
A
1GC
1
E
O2A
1GC
1_555
A
MG
576
F
MG
MG
1_555
A
HOH
578
N
O
HOH
1_555
166.6
A
1GC
1
E
O1G
1GC
1_555
A
MG
576
F
MG
MG
1_555
A
HOH
578
N
O
HOH
1_555
85.9
A
1GC
1
E
O2B
1GC
1_555
A
MG
576
F
MG
MG
1_555
A
HOH
578
N
O
HOH
1_555
82.1
A
ASP
427
A
OD2
ASP
186
1_555
A
MG
576
F
MG
MG
1_555
A
HOH
578
N
O
HOH
1_555
82.5
A
ASP
429
A
OD1
ASP
188
1_555
A
MG
576
F
MG
MG
1_555
A
HOH
578
N
O
HOH
1_555
82.2
A
SER
339
A
O
SER
98
1_555
A
NA
5
H
NA
NA
1_555
A
ILE
341
A
O
ILE
100
1_555
94.6
A
SER
339
A
O
SER
98
1_555
A
NA
5
H
NA
NA
1_555
A
ALA
344
A
O
ALA
103
1_555
91.4
A
ILE
341
A
O
ILE
100
1_555
A
NA
5
H
NA
NA
1_555
A
ALA
344
A
O
ALA
103
1_555
86.6
A
SER
339
A
O
SER
98
1_555
A
NA
5
H
NA
NA
1_555
A
HOH
580
N
O
HOH
1_555
87.1
A
ILE
341
A
O
ILE
100
1_555
A
NA
5
H
NA
NA
1_555
A
HOH
580
N
O
HOH
1_555
98.4
A
ALA
344
A
O
ALA
103
1_555
A
NA
5
H
NA
NA
1_555
A
HOH
580
N
O
HOH
1_555
174.9
A
SER
339
A
O
SER
98
1_555
A
NA
5
H
NA
NA
1_555
C
DA
5
C
OP1
DA
5
1_555
166.8
A
ILE
341
A
O
ILE
100
1_555
A
NA
5
H
NA
NA
1_555
C
DA
5
C
OP1
DA
5
1_555
98.3
A
ALA
344
A
O
ALA
103
1_555
A
NA
5
H
NA
NA
1_555
C
DA
5
C
OP1
DA
5
1_555
92.1
A
HOH
580
N
O
HOH
1_555
A
NA
5
H
NA
NA
1_555
C
DA
5
C
OP1
DA
5
1_555
88.3
A
SER
339
A
O
SER
98
1_555
A
NA
5
H
NA
NA
1_555
C
HOH
10
P
O
HOH
1_555
79.4
A
ILE
341
A
O
ILE
100
1_555
A
NA
5
H
NA
NA
1_555
C
HOH
10
P
O
HOH
1_555
171.9
A
ALA
344
A
O
ALA
103
1_555
A
NA
5
H
NA
NA
1_555
C
HOH
10
P
O
HOH
1_555
88.1
A
HOH
580
N
O
HOH
1_555
A
NA
5
H
NA
NA
1_555
C
HOH
10
P
O
HOH
1_555
86.8
C
DA
5
C
OP1
DA
5
1_555
A
NA
5
H
NA
NA
1_555
C
HOH
10
P
O
HOH
1_555
88.0
A
ASP
382
A
OD1
ASP
141
1_555
A
MN
6
I
MN
MN
1_555
A
HIS
486
A
ND1
HIS
240
1_555
96.3
A
ASP
382
A
OD1
ASP
141
1_555
A
MN
6
I
MN
MN
1_555
A
HOH
588
N
O
HOH
1_555
71.1
A
HIS
486
A
ND1
HIS
240
1_555
A
MN
6
I
MN
MN
1_555
A
HOH
588
N
O
HOH
1_555
91.2
A
ASP
382
A
OD1
ASP
141
1_555
A
MN
6
I
MN
MN
1_555
A
HOH
589
N
O
HOH
1_555
85.1
A
HIS
486
A
ND1
HIS
240
1_555
A
MN
6
I
MN
MN
1_555
A
HOH
589
N
O
HOH
1_555
175.9
A
HOH
588
N
O
HOH
1_555
A
MN
6
I
MN
MN
1_555
A
HOH
589
N
O
HOH
1_555
92.9
A
ASP
382
A
OD1
ASP
141
1_555
A
MN
6
I
MN
MN
1_555
A
HOH
590
N
O
HOH
1_555
126.3
A
HIS
486
A
ND1
HIS
240
1_555
A
MN
6
I
MN
MN
1_555
A
HOH
590
N
O
HOH
1_555
88.8
A
HOH
588
N
O
HOH
1_555
A
MN
6
I
MN
MN
1_555
A
HOH
590
N
O
HOH
1_555
162.5
A
HOH
589
N
O
HOH
1_555
A
MN
6
I
MN
MN
1_555
A
HOH
590
N
O
HOH
1_555
87.3
A
HOH
30
N
O
HOH
1_555
A
MN
7
J
MN
MN
1_555
A
HIS
530
A
NE2
HIS
284
1_555
86.4
A
HOH
30
N
O
HOH
1_555
A
MN
7
J
MN
MN
1_555
A
HOH
602
N
O
HOH
1_555
98.0
A
HIS
530
A
NE2
HIS
284
1_555
A
MN
7
J
MN
MN
1_555
A
HOH
602
N
O
HOH
1_555
166.8
A
HOH
30
N
O
HOH
1_555
A
MN
7
J
MN
MN
1_555
B
DA
8
B
OP1
DA
8
1_555
101.7
A
HIS
530
A
NE2
HIS
284
1_555
A
MN
7
J
MN
MN
1_555
B
DA
8
B
OP1
DA
8
1_555
98.2
A
HOH
602
N
O
HOH
1_555
A
MN
7
J
MN
MN
1_555
B
DA
8
B
OP1
DA
8
1_555
93.1
A
CYS
300
A
O
CYS
59
1_555
A
NA
10
M
NA
NA
1_555
A
ILE
305
A
O
ILE
64
1_555
76.0
A
CYS
300
A
O
CYS
59
1_555
A
NA
10
M
NA
NA
1_555
A
HOH
632
N
O
HOH
1_555
86.4
A
ILE
305
A
O
ILE
64
1_555
A
NA
10
M
NA
NA
1_555
A
HOH
632
N
O
HOH
1_555
146.4
A
CYS
300
A
O
CYS
59
1_555
A
NA
10
M
NA
NA
1_555
D
DC
3
D
OP1
DC
3
1_555
139.4
A
ILE
305
A
O
ILE
64
1_555
A
NA
10
M
NA
NA
1_555
D
DC
3
D
OP1
DC
3
1_555
90.2
A
HOH
632
N
O
HOH
1_555
A
NA
10
M
NA
NA
1_555
D
DC
3
D
OP1
DC
3
1_555
84.8
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
MET
387
A
N
MET
146
A
O
CYS
425
A
O
CYS
184
A
N
VAL
413
A
N
VAL
172
A
O
LEU
431
A
O
LEU
190
A
N
VAL
430
A
N
VAL
189
A
O
ASP
490
A
O
ASP
244
A
O
ARG
487
A
O
ARG
241
A
N
CYS
477
A
N
CYS
231
A
O
VAL
476
A
O
VAL
230
A
N
THR
458
A
N
THR
217
A
N
SER
526
A
N
SER
280
A
O
SER
533
A
O
SER
287
A
N
LEU
532
A
N
LEU
286
A
O
LEU
551
A
O
LEU
305
1
A
OG1
THR
250
A
OG1
THR
9
1
Y
1
A
CG2
THR
250
A
CG2
THR
9
1
Y
1
A
CG
GLU
258
A
CG
GLU
17
1
Y
1
A
CD
GLU
258
A
CD
GLU
17
1
Y
1
A
OE1
GLU
258
A
OE1
GLU
17
1
Y
1
A
OE2
GLU
258
A
OE2
GLU
17
1
Y
1
A
CG
LYS
259
A
CG
LYS
18
1
Y
1
A
CD
LYS
259
A
CD
LYS
18
1
Y
1
A
CE
LYS
259
A
CE
LYS
18
1
Y
1
A
NZ
LYS
259
A
NZ
LYS
18
1
Y
1
A
CG
LYS
291
A
CG
LYS
50
1
Y
1
A
CD
LYS
291
A
CD
LYS
50
1
Y
1
A
CE
LYS
291
A
CE
LYS
50
1
Y
1
A
NZ
LYS
291
A
NZ
LYS
50
1
Y
1
A
CG
GLN
297
A
CG
GLN
56
1
Y
1
A
CD
GLN
297
A
CD
GLN
56
1
Y
1
A
OE1
GLN
297
A
OE1
GLN
56
1
Y
1
A
NE2
GLN
297
A
NE2
GLN
56
1
Y
1
A
CG
ARG
323
A
CG
ARG
82
1
Y
1
A
CD
ARG
323
A
CD
ARG
82
1
Y
1
A
NE
ARG
323
A
NE
ARG
82
1
Y
1
A
CZ
ARG
323
A
CZ
ARG
82
1
Y
1
A
NH1
ARG
323
A
NH1
ARG
82
1
Y
1
A
NH2
ARG
323
A
NH2
ARG
82
1
Y
1
A
N
LYS
422
B
A
N
LYS
181
0
Y
1
A
CG
ARG
438
A
CG
ARG
197
1
Y
1
A
CD
ARG
438
A
CD
ARG
197
1
Y
1
A
NE
ARG
438
A
NE
ARG
197
1
Y
1
A
CZ
ARG
438
A
CZ
ARG
197
1
Y
1
A
NH1
ARG
438
A
NH1
ARG
197
1
Y
1
A
NH2
ARG
438
A
NH2
ARG
197
1
Y
1
D
O5'
DG
1
D
O5'
DG
1
0
Y
1
A
ALA
242
A
ALA
1
1
Y
1
A
GLN
243
A
GLN
2
1
Y
1
A
PRO
244
A
PRO
3
1
Y
1
A
SER
245
A
SER
4
1
Y
1
A
SER
246
A
SER
5
1
Y
1
A
GLN
247
A
GLN
6
1
Y
1
A
LYS
248
A
LYS
7
1
Y
1
A
VAL
537
A
VAL
291
1
Y
1
A
ARG
538
A
ARG
292
1
Y
1
A
ASN
539
A
ASN
293
1
Y
1
A
THR
540
A
THR
294
1
Y
1
A
HIS
541
A
HIS
295
1
Y
1
A
GLY
542
A
GLY
296
1
Y
1
A
CYS
543
A
CYS
297
1
Y
1
A
LYS
544
A
LYS
298
1
Y
1
A
VAL
545
A
VAL
299
1
Y
1
A
GLY
546
A
GLY
300
1
Y
1
A
ASN
253
-143.64
39.83
1
A
ILE
256
-94.76
-60.38
1
A
GLU
330
-68.06
0.53
1
A
CYS
415
-102.31
-131.20
1
A
ARG
438
-146.93
-19.64
1
A
ILE
443
-125.18
-54.13
1
A
PHE
444
-18.46
-70.58
1
A
ALA
535
-46.68
159.61
1
A
ARG
573
A
-109.60
55.20
all.par
protein.top
dna-rna.top
water.top
nucleic_compounds.to
ion.top
0.243
0.007
0.213
0.213
0.213
2.20
25.27
1148
25329
22799
5.0
89.0
RANDOM
558756.52
0.000000
1
RESTRAINED
THROUGHOUT
0.0
FOURIER SYNTHESIS
Engh & Huber
FLAT MODEL
42.6426
0.337211
0.33
0.29
5.00
0.33
0.27
2.20
25.27
202
3089
39
421
2427
0.005
1.0
21.3
0.84
0.344
0.026
0.280
2.34
169
2934
6
5.4
73.0
2.2
50
3PMN
25329
25329
98923
98923
.09
1
17.6
3.9
99.2
2.2
2.28
2.4
2462
.431
2.5
98.2
data collection
CrystalClear
refinement
CNS
1.1
data reduction
HKL-2000
data scaling
HKL-2000
phasing
CNS
1.1
ternary crystal structure of polymerase lambda variant with a GT mispair at the primer terminus with Mn2+ in the active site
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
7
N
N
8
N
N
7
N
N
7
N
N
9
N
N
9
N
N
8
N
N
10
N
N
10
N
N
10
N
N
10
N
N
A
ASN
253
A
ASN
12
HELX_P
A
GLN
270
A
GLN
29
1
1
18
A
ASP
272
A
ASP
31
HELX_P
A
SER
288
A
SER
47
1
2
17
A
SER
295
A
SER
54
HELX_P
A
ILE
302
A
ILE
61
1
3
8
A
GLY
306
A
GLY
65
HELX_P
A
GLY
320
A
GLY
79
1
4
15
A
LEU
322
A
LEU
81
HELX_P
A
ILE
328
A
ILE
87
5
5
7
A
SER
331
A
SER
90
HELX_P
A
ASN
340
A
ASN
99
1
6
10
A
GLY
345
A
GLY
104
HELX_P
A
GLN
355
A
GLN
114
1
7
11
A
SER
359
A
SER
118
HELX_P
A
ALA
367
A
ALA
126
1
8
9
A
THR
370
A
THR
129
HELX_P
A
HIS
379
A
HIS
138
1
9
10
A
SER
381
A
SER
140
HELX_P
A
GLU
385
A
GLU
144
5
10
5
A
ARG
389
A
ARG
148
HELX_P
A
ALA
405
A
ALA
164
1
11
17
A
CYS
415
A
CYS
174
HELX_P
A
ARG
420
A
ARG
179
1
12
6
A
ILE
443
A
ILE
202
HELX_P
A
GLU
454
A
GLU
213
1
13
12
A
PRO
495
A
PRO
249
HELX_P
A
SER
497
A
SER
251
5
14
3
A
GLU
498
A
GLU
252
HELX_P
A
GLY
508
A
GLY
262
1
15
11
A
SER
509
A
SER
263
HELX_P
A
LYS
523
A
LYS
277
1
16
15
A
THR
555
A
THR
309
HELX_P
A
LEU
563
A
LEU
317
1
17
9
A
GLU
569
A
GLU
323
HELX_P
A
ARG
573
A
ARG
327
5
18
5
metalc
2.306
A
1GC
1
E
O2A
1GC
1_555
A
MN
2
G
MN
MN
1_555
metalc
2.005
A
1GC
1
E
O2A
1GC
1_555
A
MG
576
F
MG
MG
1_555
metalc
2.009
A
1GC
1
E
O1G
1GC
1_555
A
MG
576
F
MG
MG
1_555
metalc
2.034
A
1GC
1
E
O2B
1GC
1_555
A
MG
576
F
MG
MG
1_555
metalc
2.068
A
MN
2
G
MN
MN
1_555
A
ASP
427
A
OD1
ASP
186
1_555
metalc
2.144
A
MN
2
G
MN
MN
1_555
A
ASP
429
A
OD2
ASP
188
1_555
metalc
2.051
A
MN
2
G
MN
MN
1_555
A
ASP
490
A
OD2
ASP
244
1_555
metalc
2.385
A
MN
2
G
MN
MN
1_555
A
HOH
577
N
O
HOH
1_555
metalc
2.456
A
MN
2
G
MN
MN
1_555
C
DG
6
C
O3'
DG
6
1_555
metalc
2.366
A
NA
5
H
NA
NA
1_555
A
SER
339
A
O
SER
98
1_555
metalc
2.542
A
NA
5
H
NA
NA
1_555
A
ILE
341
A
O
ILE
100
1_555
metalc
2.300
A
NA
5
H
NA
NA
1_555
A
ALA
344
A
O
ALA
103
1_555
metalc
2.267
A
NA
5
H
NA
NA
1_555
A
HOH
580
N
O
HOH
1_555
metalc
2.418
A
NA
5
H
NA
NA
1_555
C
DA
5
C
OP1
DA
5
1_555
metalc
2.422
A
NA
5
H
NA
NA
1_555
C
HOH
10
P
O
HOH
1_555
metalc
2.103
A
MN
6
I
MN
MN
1_555
A
ASP
382
A
OD1
ASP
141
1_555
metalc
2.555
A
MN
6
I
MN
MN
1_555
A
HIS
486
A
ND1
HIS
240
1_555
metalc
2.597
A
MN
6
I
MN
MN
1_555
A
HOH
588
N
O
HOH
1_555
metalc
2.704
A
MN
6
I
MN
MN
1_555
A
HOH
589
N
O
HOH
1_555
metalc
2.533
A
MN
6
I
MN
MN
1_555
A
HOH
590
N
O
HOH
1_555
metalc
2.511
A
MN
7
J
MN
MN
1_555
A
HOH
30
N
O
HOH
1_555
metalc
2.159
A
MN
7
J
MN
MN
1_555
A
HIS
530
A
NE2
HIS
284
1_555
metalc
2.734
A
MN
7
J
MN
MN
1_555
A
HOH
602
N
O
HOH
1_555
metalc
2.440
A
MN
7
J
MN
MN
1_555
B
DA
8
B
OP1
DA
8
1_555
metalc
2.562
A
NA
10
M
NA
NA
1_555
A
CYS
300
A
O
CYS
59
1_555
metalc
2.577
A
NA
10
M
NA
NA
1_555
A
ILE
305
A
O
ILE
64
1_555
metalc
2.347
A
NA
10
M
NA
NA
1_555
A
HOH
632
N
O
HOH
1_555
metalc
3.124
A
NA
10
M
NA
NA
1_555
D
DC
3
D
OP1
DC
3
1_555
metalc
1.930
A
ASP
427
A
OD2
ASP
186
1_555
A
MG
576
F
MG
MG
1_555
metalc
2.180
A
ASP
429
A
OD1
ASP
188
1_555
A
MG
576
F
MG
MG
1_555
metalc
2.133
A
MG
576
F
MG
MG
1_555
A
HOH
578
N
O
HOH
1_555
hydrog
WATSON-CRICK
B
DC
1
B
N3
DC
1
1_555
D
DG
4
D
N1
DG
4
1_555
hydrog
WATSON-CRICK
B
DC
1
B
N4
DC
1
1_555
D
DG
4
D
O6
DG
4
1_555
hydrog
WATSON-CRICK
B
DC
1
B
O2
DC
1
1_555
D
DG
4
D
N2
DG
4
1_555
hydrog
WATSON-CRICK
B
DG
2
B
N1
DG
2
1_555
D
DC
3
D
N3
DC
3
1_555
hydrog
WATSON-CRICK
B
DG
2
B
N2
DG
2
1_555
D
DC
3
D
O2
DC
3
1_555
hydrog
WATSON-CRICK
B
DG
2
B
O6
DG
2
1_555
D
DC
3
D
N4
DC
3
1_555
hydrog
WATSON-CRICK
B
DG
3
B
N1
DG
3
1_555
D
DC
2
D
N3
DC
2
1_555
hydrog
WATSON-CRICK
B
DG
3
B
N2
DG
3
1_555
D
DC
2
D
O2
DC
2
1_555
hydrog
WATSON-CRICK
B
DG
3
B
O6
DG
3
1_555
D
DC
2
D
N4
DC
2
1_555
hydrog
WATSON-CRICK
B
DC
4
B
N3
DC
4
1_555
D
DG
1
D
N1
DG
1
1_555
hydrog
WATSON-CRICK
B
DC
4
B
N4
DC
4
1_555
D
DG
1
D
O6
DG
1
1_555
hydrog
WATSON-CRICK
B
DC
4
B
O2
DC
4
1_555
D
DG
1
D
N2
DG
1
1_555
hydrog
TYPE_28_PAIR
B
DT
6
B
N3
DT
6
1_555
C
DG
6
C
O6
DG
6
1_555
hydrog
TYPE_28_PAIR
B
DT
6
B
O2
DT
6
1_555
C
DG
6
C
N1
DG
6
1_555
hydrog
WATSON-CRICK
B
DT
7
B
N3
DT
7
1_555
C
DA
5
C
N1
DA
5
1_555
hydrog
WATSON-CRICK
B
DT
7
B
O4
DT
7
1_555
C
DA
5
C
N6
DA
5
1_555
hydrog
WATSON-CRICK
B
DA
8
B
N1
DA
8
1_555
C
DT
4
C
N3
DT
4
1_555
hydrog
WATSON-CRICK
B
DA
8
B
N6
DA
8
1_555
C
DT
4
C
O4
DT
4
1_555
hydrog
WATSON-CRICK
B
DC
9
B
N3
DC
9
1_555
C
DG
3
C
N1
DG
3
1_555
hydrog
WATSON-CRICK
B
DC
9
B
N4
DC
9
1_555
C
DG
3
C
O6
DG
3
1_555
hydrog
WATSON-CRICK
B
DC
9
B
O2
DC
9
1_555
C
DG
3
C
N2
DG
3
1_555
hydrog
WATSON-CRICK
B
DT
10
B
N3
DT
10
1_555
C
DA
2
C
N1
DA
2
1_555
hydrog
WATSON-CRICK
B
DT
10
B
O4
DT
10
1_555
C
DA
2
C
N6
DA
2
1_555
hydrog
WATSON-CRICK
B
DG
11
B
N1
DG
11
1_555
C
DC
1
C
N3
DC
1
1_555
hydrog
WATSON-CRICK
B
DG
11
B
N2
DG
11
1_555
C
DC
1
C
O2
DC
1
1_555
hydrog
WATSON-CRICK
B
DG
11
B
O6
DG
11
1_555
C
DC
1
C
N4
DC
1
1_555
LYASE,TRANSFERASE/DNA
PROTEIN-DNA COMPLEX, LYASE, TRANSFERASE, DNA, TRANSFERASE-DNA complex
A
GLY
508
A
GLY
262
1
A
SER
509
A
SER
263
1.69
DPOLL_HUMAN
UNP
1
242
Q9UGP5
AQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGH
LRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQK
AAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPG
PGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFR
LLGLPYREPAERDW
3PMN
PDB
2
3PMN
CGGCCTTACTG
3PMN
PDB
3
3PMN
CAGTAG
3PMN
PDB
4
3PMN
GCCG
242
575
3PMN
242
575
Q9UGP5
A
1
1
329
1
11
3PMN
1
11
3PMN
B
2
1
11
1
6
3PMN
1
6
3PMN
C
3
1
6
1
4
3PMN
1
4
3PMN
D
4
1
4
1
SER
SEE REMARK 999
LYS
463
3PMN
A
Q9UGP5
UNP
463
222
1
GLN
SEE REMARK 999
GLY
464
3PMN
A
Q9UGP5
UNP
464
223
1
GLU
SEE REMARK 999
3PMN
A
Q9UGP5
UNP
465
1
GLU
SEE REMARK 999
3PMN
A
Q9UGP5
UNP
466
1
ASN
SEE REMARK 999
3PMN
A
Q9UGP5
UNP
467
1
GLY
SEE REMARK 999
3PMN
A
Q9UGP5
UNP
468
1
GLN
SEE REMARK 999
3PMN
A
Q9UGP5
UNP
469
1
GLN
SEE REMARK 999
GLU
470
3PMN
A
Q9UGP5
UNP
470
224
1
GLN
SEE REMARK 999
THR
471
3PMN
A
Q9UGP5
UNP
471
225
2
5
3
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
MET
387
A
MET
146
A
PRO
388
A
PRO
147
A
THR
424
A
THR
183
A
CYS
425
A
CYS
184
A
LEU
411
A
LEU
170
A
ALA
414
A
ALA
173
A
VAL
428
A
VAL
187
A
THR
433
A
THR
192
A
ARG
487
A
ARG
241
A
VAL
493
A
VAL
247
A
LYS
472
A
LYS
226
A
CYS
477
A
CYS
231
A
LEU
457
A
LEU
216
A
LYS
463
A
LYS
222
A
MET
525
A
MET
279
A
LEU
527
A
LEU
281
A
LEU
532
A
LEU
286
A
THR
534
A
THR
288
A
VAL
550
A
VAL
304
A
LEU
551
A
LEU
305
BINDING SITE FOR RESIDUE 1GC A 1
A
1GC
1
Software
25
BINDING SITE FOR RESIDUE MG A 576
A
MG
576
Software
5
BINDING SITE FOR RESIDUE MN A 2
A
MN
2
Software
7
BINDING SITE FOR RESIDUE NA A 5
A
NA
5
Software
6
BINDING SITE FOR RESIDUE MN A 6
A
MN
6
Software
6
BINDING SITE FOR RESIDUE MN A 7
A
MN
7
Software
4
BINDING SITE FOR RESIDUE CL A 8
A
CL
8
Software
2
BINDING SITE FOR RESIDUE CL A 9
A
CL
9
Software
1
BINDING SITE FOR RESIDUE NA A 10
A
NA
10
Software
5
A
MN
2
G
MN
25
1_555
A
HOH
3
N
HOH
25
1_555
A
HOH
27
N
HOH
25
1_555
A
HOH
53
N
HOH
25
1_555
A
ARG
386
A
ARG
145
25
1_555
A
GLY
416
A
GLY
175
25
1_555
A
SER
417
A
SER
176
25
1_555
A
ARG
420
A
ARG
179
25
1_555
A
GLY
426
A
GLY
185
25
1_555
A
ASP
427
A
ASP
186
25
1_555
A
ASP
429
A
ASP
188
25
1_555
A
TYR
505
A
TYR
259
25
1_555
A
PHE
506
A
PHE
260
25
1_555
A
THR
507
A
THR
261
25
1_555
A
GLY
508
A
GLY
262
25
1_555
A
ALA
510
A
ALA
264
25
1_555
A
ASN
513
A
ASN
267
25
1_555
A
ARG
517
A
ARG
271
25
1_555
A
MG
576
F
MG
25
1_555
A
HOH
577
N
HOH
25
1_555
A
HOH
578
N
HOH
25
1_555
A
HOH
629
N
HOH
25
1_555
B
DC
5
B
DC
5
25
1_555
C
DG
6
C
DG
6
25
1_555
C
HOH
72
P
HOH
25
1_555
A
1GC
1
E
1GC
5
1_555
A
MN
2
G
MN
5
1_555
A
ASP
427
A
ASP
186
5
1_555
A
ASP
429
A
ASP
188
5
1_555
A
HOH
578
N
HOH
5
1_555
A
1GC
1
E
1GC
7
1_555
A
ASP
427
A
ASP
186
7
1_555
A
ASP
429
A
ASP
188
7
1_555
A
ASP
490
A
ASP
244
7
1_555
A
MG
576
F
MG
7
1_555
A
HOH
577
N
HOH
7
1_555
C
DG
6
C
DG
6
7
1_555
A
SER
339
A
SER
98
6
1_555
A
ILE
341
A
ILE
100
6
1_555
A
ALA
344
A
ALA
103
6
1_555
A
HOH
580
N
HOH
6
1_555
C
DA
5
C
DA
5
6
1_555
C
HOH
10
P
HOH
6
1_555
A
CL
8
K
CL
6
1_555
A
ASP
382
A
ASP
141
6
1_555
A
HIS
486
A
HIS
240
6
1_555
A
HOH
588
N
HOH
6
1_555
A
HOH
589
N
HOH
6
1_555
A
HOH
590
N
HOH
6
1_555
A
HOH
30
N
HOH
4
1_555
A
HIS
530
A
HIS
284
4
1_555
A
HOH
602
N
HOH
4
1_555
B
DA
8
B
DA
8
4
1_555
A
MN
6
I
MN
2
1_555
A
HOH
588
N
HOH
2
1_555
A
ARG
514
A
ARG
268
1
1_555
A
CYS
300
A
CYS
59
5
1_555
A
ILE
302
A
ILE
61
5
1_555
A
ILE
305
A
ILE
64
5
1_555
A
HOH
632
N
HOH
5
1_555
D
DC
3
D
DC
3
5
1_555
19
P 21 21 21