0.021097
0.000000
0.000000
0.000000
0.020080
0.000000
0.000000
0.000000
0.019520
0.00000
0.00000
0.00000
Loevgreen, M.N.
Christensen, H.E.M.
Harris, P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
47.400
49.800
51.230
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Co 2
58.933
COBALT (II) ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
Fe3 S4
295.795
FE3-S4 CLUSTER
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
O
N
21
N
N
N
22
N
O
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
N
N
32
S
C
N
33
N
C
N
34
N
O
N
35
N
C
N
36
N
C
N
37
N
O
N
38
N
O
N
39
N
O
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
CO
N
48
N
N
N
49
R
C
N
50
N
C
N
51
N
O
N
52
N
C
N
53
N
S
N
54
N
O
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
FE
N
63
N
FE
N
64
N
FE
N
65
N
S
N
66
N
S
N
67
N
S
N
68
N
S
N
69
N
N
N
70
S
C
N
71
N
C
N
72
N
O
N
73
N
C
N
74
N
C
N
75
N
C
N
76
N
O
N
77
N
N
N
78
N
O
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
N
N
90
S
C
N
91
N
C
N
92
N
O
N
93
N
C
N
94
N
C
N
95
N
C
N
96
N
O
N
97
N
O
N
98
N
O
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
N
C
N
110
N
C
N
111
N
O
N
112
N
O
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
N
N
119
S
C
N
120
N
C
N
121
N
O
N
122
S
C
N
123
N
C
N
124
N
C
N
125
N
C
N
126
N
O
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
N
N
141
S
C
N
142
N
C
N
143
N
O
N
144
N
C
N
145
N
C
N
146
N
C
N
147
N
C
N
148
N
O
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
N
N
163
S
C
N
164
N
C
N
165
N
O
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
N
N
171
N
O
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
N
N
188
S
C
N
189
N
C
N
190
N
O
N
191
N
C
N
192
N
C
N
193
N
S
N
194
N
C
N
195
N
O
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
N
N
208
S
C
N
209
N
C
N
210
N
O
N
211
N
C
Y
212
N
C
Y
213
N
C
Y
214
N
C
Y
215
N
C
Y
216
N
C
Y
217
N
C
N
218
N
O
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
C
N
237
N
O
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
N
252
N
O
N
253
N
O
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
N
N
262
S
C
N
263
N
C
N
264
N
O
N
265
R
C
N
266
N
O
N
267
N
C
N
268
N
O
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
N
N
279
S
C
N
280
N
C
N
281
N
O
N
282
N
C
Y
283
N
C
Y
284
N
C
Y
285
N
C
Y
286
N
N
Y
287
N
C
Y
288
N
C
Y
289
N
C
Y
290
N
C
Y
291
N
C
N
292
N
O
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
N
C
Y
310
N
C
Y
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
Y
315
N
C
N
316
N
O
N
317
N
O
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
N
N
330
S
C
N
331
N
C
N
332
N
O
N
333
N
C
N
334
N
C
N
335
N
C
N
336
N
O
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
doub
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
doub
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
doub
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
doub
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
doub
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
doub
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
doub
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
doub
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
doub
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
Y
208
N
doub
Y
209
N
sing
Y
210
N
sing
N
211
N
sing
Y
212
N
doub
N
213
N
sing
Y
214
N
doub
N
215
N
sing
Y
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
doub
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
doub
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
doub
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
Y
277
N
doub
Y
278
N
sing
Y
279
N
sing
N
280
N
sing
Y
281
N
doub
Y
282
N
sing
Y
283
N
sing
N
284
N
sing
Y
285
N
sing
Y
286
N
doub
N
287
N
sing
Y
288
N
doub
N
289
N
sing
Y
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
doub
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
Y
305
N
doub
Y
306
N
sing
Y
307
N
sing
N
308
N
sing
Y
309
N
doub
N
310
N
sing
Y
311
N
doub
N
312
N
sing
Y
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
doub
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
GW
J.Biol.Inorg.Chem.
JJBCFA
2154
0949-8257
16
763
775
10.1007/s00775-011-0778-7
21484348
Crystal structures of the all cysteinyl coordinated D14C variant of Pyrococcus furiosus ferredoxin: [4Fe-4S] <-> [3Fe-4S] cluster conversion
2011
10.2210/pdb3pni/pdb
pdb_00003pni
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2010-03-12
ADSC QUANTUM 315r
channel cut ESRF monochromator
SINGLE WAVELENGTH
M
x-ray
1
0.9765
1.0
ID14-4
ESRF
0.9765
SYNCHROTRON
ESRF BEAMLINE ID14-4
7159.056
Ferredoxin
Ferredoxin
D14C
2
man
polymer
295.795
FE3-S4 CLUSTER
2
syn
non-polymer
58.933
COBALT (II) ION
4
syn
non-polymer
no
no
AWKVSVDQDTCIGCAICASLCPDVFEMNDEGKAQPKVEVIEDEELYNCAKEAMEACPVSAITIEEA
AWKVSVDQDTCIGCAICASLCPDVFEMNDEGKAQPKVEVIEDEELYNCAKEAMEACPVSAITIEEA
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
DSM3638
sample
fdxA, PF1909
2261
Pyrococcus furiosus
469008
Escherichia coli
BL21(de3)
Plasmid
pET3a
1
2.11
41.75
VAPOR DIFFUSION, HANGING DROP
8.5
35% PEG1500, 100mM Tris/HCl, 10mM [Co(NH3)6]Cl3, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Database references
Data collection
Database references
Derived calculations
Refinement description
1
0
2011-04-13
1
1
2011-07-13
1
2
2013-06-19
1
3
2023-09-06
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
D14C [4Fe-4S] Pyrococcus furiosus ferredoxin
The 1.5 A Resolution Crystal Structure of [Fe3S4]-Ferredoxin from the hyperthermophilic Archaeon Pyrococcus furiosus
Crystal structure of the [Fe3S4]-ferredoxin from the hyperthermophilic archaeon Pyrococcus furiosus
RCSB
Y
RCSB
2010-11-19
REL
REL
F3S
FE3-S4 CLUSTER
CO
COBALT (II) ION
2Z8Q
PDB ENTRY 2Z8Q
PDB
experimental model
F3S
70
2
F3S
F3S
70
A
CO
75
3
CO
CO
75
A
CO
76
3
CO
CO
76
B
F3S
70
2
F3S
F3S
70
B
CO
75
3
CO
CO
75
B
CO
76
3
CO
CO
67
B
ALA
1
n
1
ALA
1
A
TRP
2
n
2
TRP
2
A
LYS
3
n
3
LYS
3
A
VAL
4
n
4
VAL
4
A
SER
5
n
5
SER
5
A
VAL
6
n
6
VAL
6
A
ASP
7
n
7
ASP
7
A
GLN
8
n
8
GLN
8
A
ASP
9
n
9
ASP
9
A
THR
10
n
10
THR
10
A
CYS
11
n
11
CYS
11
A
ILE
12
n
12
ILE
12
A
GLY
13
n
13
GLY
13
A
CYS
14
n
14
CYS
14
A
ALA
15
n
15
ALA
15
A
ILE
16
n
16
ILE
16
A
CYS
17
n
17
CYS
17
A
ALA
18
n
18
ALA
18
A
SER
19
n
19
SER
19
A
LEU
20
n
20
LEU
20
A
CYS
21
n
21
CYS
21
A
PRO
22
n
22
PRO
22
A
ASP
23
n
23
ASP
23
A
VAL
24
n
24
VAL
24
A
PHE
25
n
25
PHE
25
A
GLU
26
n
26
GLU
26
A
MET
27
n
27
MET
27
A
ASN
28
n
28
ASN
28
A
ASP
29
n
29
ASP
29
A
GLU
30
n
30
GLU
30
A
GLY
31
n
31
GLY
31
A
LYS
32
n
32
LYS
32
A
ALA
33
n
33
ALA
33
A
GLN
34
n
34
GLN
34
A
PRO
35
n
35
PRO
35
A
LYS
36
n
36
LYS
36
A
VAL
37
n
37
VAL
37
A
GLU
38
n
38
GLU
38
A
VAL
39
n
39
VAL
39
A
ILE
40
n
40
ILE
40
A
GLU
41
n
41
GLU
41
A
ASP
42
n
42
ASP
42
A
GLU
43
n
43
GLU
43
A
GLU
44
n
44
GLU
44
A
LEU
45
n
45
LEU
45
A
TYR
46
n
46
TYR
46
A
ASN
47
n
47
ASN
47
A
CYS
48
n
48
CYS
48
A
ALA
49
n
49
ALA
49
A
LYS
50
n
50
LYS
50
A
GLU
51
n
51
GLU
51
A
ALA
52
n
52
ALA
52
A
MET
53
n
53
MET
53
A
GLU
54
n
54
GLU
54
A
ALA
55
n
55
ALA
55
A
CYS
56
n
56
CYS
56
A
PRO
57
n
57
PRO
57
A
VAL
58
n
58
VAL
58
A
SER
59
n
59
SER
59
A
ALA
60
n
60
ALA
60
A
ILE
61
n
61
ILE
61
A
THR
62
n
62
THR
62
A
ILE
63
n
63
ILE
63
A
GLU
64
n
64
GLU
64
A
GLU
65
n
65
GLU
65
A
ALA
66
n
66
ALA
66
A
ALA
1
n
1
ALA
1
B
TRP
2
n
2
TRP
2
B
LYS
3
n
3
LYS
3
B
VAL
4
n
4
VAL
4
B
SER
5
n
5
SER
5
B
VAL
6
n
6
VAL
6
B
ASP
7
n
7
ASP
7
B
GLN
8
n
8
GLN
8
B
ASP
9
n
9
ASP
9
B
THR
10
n
10
THR
10
B
CYS
11
n
11
CYS
11
B
ILE
12
n
12
ILE
12
B
GLY
13
n
13
GLY
13
B
CYS
14
n
14
CYS
14
B
ALA
15
n
15
ALA
15
B
ILE
16
n
16
ILE
16
B
CYS
17
n
17
CYS
17
B
ALA
18
n
18
ALA
18
B
SER
19
n
19
SER
19
B
LEU
20
n
20
LEU
20
B
CYS
21
n
21
CYS
21
B
PRO
22
n
22
PRO
22
B
ASP
23
n
23
ASP
23
B
VAL
24
n
24
VAL
24
B
PHE
25
n
25
PHE
25
B
GLU
26
n
26
GLU
26
B
MET
27
n
27
MET
27
B
ASN
28
n
28
ASN
28
B
ASP
29
n
29
ASP
29
B
GLU
30
n
30
GLU
30
B
GLY
31
n
31
GLY
31
B
LYS
32
n
32
LYS
32
B
ALA
33
n
33
ALA
33
B
GLN
34
n
34
GLN
34
B
PRO
35
n
35
PRO
35
B
LYS
36
n
36
LYS
36
B
VAL
37
n
37
VAL
37
B
GLU
38
n
38
GLU
38
B
VAL
39
n
39
VAL
39
B
ILE
40
n
40
ILE
40
B
GLU
41
n
41
GLU
41
B
ASP
42
n
42
ASP
42
B
GLU
43
n
43
GLU
43
B
GLU
44
n
44
GLU
44
B
LEU
45
n
45
LEU
45
B
TYR
46
n
46
TYR
46
B
ASN
47
n
47
ASN
47
B
CYS
48
n
48
CYS
48
B
ALA
49
n
49
ALA
49
B
LYS
50
n
50
LYS
50
B
GLU
51
n
51
GLU
51
B
ALA
52
n
52
ALA
52
B
MET
53
n
53
MET
53
B
GLU
54
n
54
GLU
54
B
ALA
55
n
55
ALA
55
B
CYS
56
n
56
CYS
56
B
PRO
57
n
57
PRO
57
B
VAL
58
n
58
VAL
58
B
SER
59
n
59
SER
59
B
ALA
60
n
60
ALA
60
B
ILE
61
n
61
ILE
61
B
THR
62
n
62
THR
62
B
ILE
63
n
63
ILE
63
B
GLU
64
n
64
GLU
64
B
GLU
65
n
65
GLU
65
B
ALA
66
n
66
ALA
66
B
author_defined_assembly
1
monomeric
author_defined_assembly
1
monomeric
software_defined_assembly
PISA
2
dimeric
1670
-67
7330
A
CYS
11
A
SG
CYS
11
1_555
A
F3S
70
C
FE1
F3S
1_555
A
F3S
70
C
S1
F3S
1_555
92.9
A
CYS
11
A
SG
CYS
11
1_555
A
F3S
70
C
FE1
F3S
1_555
A
F3S
70
C
S2
F3S
1_555
112.3
A
F3S
70
C
S1
F3S
1_555
A
F3S
70
C
FE1
F3S
1_555
A
F3S
70
C
S2
F3S
1_555
87.8
A
CYS
11
A
SG
CYS
11
1_555
A
F3S
70
C
FE1
F3S
1_555
A
F3S
70
C
S3
F3S
1_555
136.1
A
F3S
70
C
S1
F3S
1_555
A
F3S
70
C
FE1
F3S
1_555
A
F3S
70
C
S3
F3S
1_555
107.3
A
F3S
70
C
S2
F3S
1_555
A
F3S
70
C
FE1
F3S
1_555
A
F3S
70
C
S3
F3S
1_555
107.1
A
CYS
17
A
SG
CYS
17
1_555
A
F3S
70
C
FE3
F3S
1_555
A
F3S
70
C
S1
F3S
1_555
109.8
A
CYS
17
A
SG
CYS
17
1_555
A
F3S
70
C
FE3
F3S
1_555
A
F3S
70
C
S3
F3S
1_555
131.7
A
F3S
70
C
S1
F3S
1_555
A
F3S
70
C
FE3
F3S
1_555
A
F3S
70
C
S3
F3S
1_555
106.4
A
CYS
17
A
SG
CYS
17
1_555
A
F3S
70
C
FE3
F3S
1_555
A
F3S
70
C
S4
F3S
1_555
96.1
A
F3S
70
C
S1
F3S
1_555
A
F3S
70
C
FE3
F3S
1_555
A
F3S
70
C
S4
F3S
1_555
104.9
A
F3S
70
C
S3
F3S
1_555
A
F3S
70
C
FE3
F3S
1_555
A
F3S
70
C
S4
F3S
1_555
104.4
A
CYS
56
A
SG
CYS
56
1_555
A
F3S
70
C
FE4
F3S
1_555
A
F3S
70
C
S2
F3S
1_555
114.5
A
CYS
56
A
SG
CYS
56
1_555
A
F3S
70
C
FE4
F3S
1_555
A
F3S
70
C
S3
F3S
1_555
111.4
A
F3S
70
C
S2
F3S
1_555
A
F3S
70
C
FE4
F3S
1_555
A
F3S
70
C
S3
F3S
1_555
107.7
A
CYS
56
A
SG
CYS
56
1_555
A
F3S
70
C
FE4
F3S
1_555
A
F3S
70
C
S4
F3S
1_555
118.6
A
F3S
70
C
S2
F3S
1_555
A
F3S
70
C
FE4
F3S
1_555
A
F3S
70
C
S4
F3S
1_555
99.3
A
F3S
70
C
S3
F3S
1_555
A
F3S
70
C
FE4
F3S
1_555
A
F3S
70
C
S4
F3S
1_555
104.0
B
CYS
11
B
SG
CYS
11
1_555
B
F3S
70
F
FE1
F3S
1_555
B
F3S
70
F
S1
F3S
1_555
103.3
B
CYS
11
B
SG
CYS
11
1_555
B
F3S
70
F
FE1
F3S
1_555
B
F3S
70
F
S2
F3S
1_555
108.1
B
F3S
70
F
S1
F3S
1_555
B
F3S
70
F
FE1
F3S
1_555
B
F3S
70
F
S2
F3S
1_555
89.2
B
CYS
11
B
SG
CYS
11
1_555
B
F3S
70
F
FE1
F3S
1_555
B
F3S
70
F
S3
F3S
1_555
132.5
B
F3S
70
F
S1
F3S
1_555
B
F3S
70
F
FE1
F3S
1_555
B
F3S
70
F
S3
F3S
1_555
107.6
B
F3S
70
F
S2
F3S
1_555
B
F3S
70
F
FE1
F3S
1_555
B
F3S
70
F
S3
F3S
1_555
107.6
B
CYS
17
B
SG
CYS
17
1_555
B
F3S
70
F
FE3
F3S
1_555
B
F3S
70
F
S1
F3S
1_555
113.5
B
CYS
17
B
SG
CYS
17
1_555
B
F3S
70
F
FE3
F3S
1_555
B
F3S
70
F
S3
F3S
1_555
128.1
B
F3S
70
F
S1
F3S
1_555
B
F3S
70
F
FE3
F3S
1_555
B
F3S
70
F
S3
F3S
1_555
107.6
B
CYS
17
B
SG
CYS
17
1_555
B
F3S
70
F
FE3
F3S
1_555
B
F3S
70
F
S4
F3S
1_555
100.2
B
F3S
70
F
S1
F3S
1_555
B
F3S
70
F
FE3
F3S
1_555
B
F3S
70
F
S4
F3S
1_555
95.4
B
F3S
70
F
S3
F3S
1_555
B
F3S
70
F
FE3
F3S
1_555
B
F3S
70
F
S4
F3S
1_555
106.3
B
CYS
56
B
SG
CYS
56
1_555
B
F3S
70
F
FE4
F3S
1_555
B
F3S
70
F
S2
F3S
1_555
113.9
B
CYS
56
B
SG
CYS
56
1_555
B
F3S
70
F
FE4
F3S
1_555
B
F3S
70
F
S3
F3S
1_555
110.7
B
F3S
70
F
S2
F3S
1_555
B
F3S
70
F
FE4
F3S
1_555
B
F3S
70
F
S3
F3S
1_555
105.7
B
CYS
56
B
SG
CYS
56
1_555
B
F3S
70
F
FE4
F3S
1_555
B
F3S
70
F
S4
F3S
1_555
117.8
B
F3S
70
F
S2
F3S
1_555
B
F3S
70
F
FE4
F3S
1_555
B
F3S
70
F
S4
F3S
1_555
103.1
B
F3S
70
F
S3
F3S
1_555
B
F3S
70
F
FE4
F3S
1_555
B
F3S
70
F
S4
F3S
1_555
104.5
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
3_555
-x,y+1/2,-z+1/2
crystal symmetry operation
0.0000000000
24.9000000000
25.6150000000
A
N
SER
5
A
N
SER
5
A
O
THR
62
A
O
THR
62
A
N
GLU
26
A
N
GLU
26
A
O
GLN
34
A
O
GLN
34
B
N
SER
5
B
N
SER
5
B
O
THR
62
B
O
THR
62
B
N
GLU
26
B
N
GLU
26
B
O
GLN
34
B
O
GLN
34
1
12.16
1.10
114.20
126.36
A
A
A
CA
CB
SG
CYS
CYS
CYS
48
48
48
N
1
13.70
1.10
114.20
127.90
B
B
B
CA
CB
SG
CYS
CYS
CYS
48
48
48
N
1
A
ALA
15
89.50
17.34
1
A
SER
19
-66.93
-175.59
1
A
LEU
20
71.47
-56.18
1
A
SER
59
46.05
79.72
1
B
ALA
15
82.14
22.20
1
B
LEU
20
75.79
-55.95
1
B
SER
59
49.26
82.04
39.344
-5.80
0.00
0.00
10.16
0.00
-4.36
0.903
0.860
0.31849
0.27892
0.28053
2.80
35.7
141
3254
3087
4.4
99.75
22.577
0.426
RANDOM
1
THROUGHOUT
0
MOLECULAR REPLACEMENT
0.520
0.80
0.80
1.40
PDB ENTRY 2Z8Q
MAXIMUM LIKELIHOOD
MASK
2.80
35.7
0
1006
18
0
988
0.015
0.022
1039
2.511
2.026
1454
7.202
5.000
134
44.017
28.636
44
23.723
15.000
178
0.091
0.200
162
0.005
0.021
766
0.427
1.500
671
0.860
2.000
1085
1.393
3.000
368
2.300
4.500
314
0.466
0.380
2.873
6
221
20
100.00
2.8
35.7
3PNI
3254
3087
0
0
1
95
2.8
2.95
456
1
5.5
100.0
data collection
ADSC
Quantum
phasing
MOLREP
refinement
REFMAC
5.5.0102
data reduction
MOSFLM
data scaling
SCALA
Crystal structure of D14C [3Fe-4S] Pyrococcus furiosus ferredoxin
1
N
N
1
N
N
2
N
N
3
N
N
3
N
N
2
N
N
3
N
N
3
N
N
A
ASP
42
A
ASP
42
HELX_P
A
CYS
56
A
CYS
56
1
1
15
B
ASP
42
B
ASP
42
HELX_P
B
CYS
56
B
CYS
56
1
2
15
disulf
2.049
A
CYS
21
A
SG
CYS
21
1_555
A
CYS
48
A
SG
CYS
48
1_555
disulf
2.030
B
CYS
21
B
SG
CYS
21
1_555
B
CYS
48
B
SG
CYS
48
1_555
metalc
2.180
A
CYS
11
A
SG
CYS
11
1_555
A
F3S
70
C
FE1
F3S
1_555
metalc
2.184
A
CYS
17
A
SG
CYS
17
1_555
A
F3S
70
C
FE3
F3S
1_555
metalc
2.211
A
CYS
56
A
SG
CYS
56
1_555
A
F3S
70
C
FE4
F3S
1_555
metalc
2.130
B
CYS
11
B
SG
CYS
11
1_555
B
F3S
70
F
FE1
F3S
1_555
metalc
2.141
B
CYS
17
B
SG
CYS
17
1_555
B
F3S
70
F
FE3
F3S
1_555
metalc
2.346
B
CYS
56
B
SG
CYS
56
1_555
B
F3S
70
F
FE4
F3S
1_555
ELECTRON TRANSPORT
ferredoxin, iron-sulfur cluster, pyrococcus furiosus, two molecules in asymmetric unit, Electron transport, Metal-binding
FER_PYRFU
UNP
1
2
P29603
AWKVSVDQDTCIGDAICASLCPDVFEMNDEGKAQPKVEVIEDEELYNCAKEAMEACPVSAITIEEA
2
67
3PNI
1
66
P29603
A
1
1
66
2
67
3PNI
1
66
P29603
B
1
1
66
1
ASP
engineered mutation
CYS
14
3PNI
A
P29603
UNP
15
14
2
ASP
engineered mutation
CYS
14
3PNI
B
P29603
UNP
15
14
2
2
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
TRP
2
A
TRP
2
A
VAL
6
A
VAL
6
A
ILE
61
A
ILE
61
A
GLU
65
A
GLU
65
A
PHE
25
A
PHE
25
A
MET
27
A
MET
27
A
ALA
33
A
ALA
33
A
PRO
35
A
PRO
35
B
TRP
2
B
TRP
2
B
VAL
6
B
VAL
6
B
ILE
61
B
ILE
61
B
GLU
65
B
GLU
65
B
PHE
25
B
PHE
25
B
MET
27
B
MET
27
B
ALA
33
B
ALA
33
B
PRO
35
B
PRO
35
BINDING SITE FOR RESIDUE F3S A 70
A
F3S
70
Software
8
BINDING SITE FOR RESIDUE CO A 75
A
CO
75
Software
2
BINDING SITE FOR RESIDUE CO B 76
B
CO
76
Software
1
BINDING SITE FOR RESIDUE F3S B 70
B
F3S
70
Software
9
BINDING SITE FOR RESIDUE CO B 75
B
CO
75
Software
1
BINDING SITE FOR RESIDUE CO B 67
B
CO
67
Software
2
A
CYS
11
A
CYS
11
8
1_555
A
ILE
12
A
ILE
12
8
1_555
A
CYS
14
A
CYS
14
8
1_555
A
ALA
15
A
ALA
15
8
1_555
A
ILE
16
A
ILE
16
8
1_555
A
CYS
17
A
CYS
17
8
1_555
A
ALA
33
A
ALA
33
8
1_555
A
CYS
56
A
CYS
56
8
1_555
A
GLU
41
A
GLU
41
2
1_555
B
ILE
12
B
ILE
12
2
2_564
B
SER
59
B
SER
59
1
1_555
B
CYS
11
B
CYS
11
9
1_555
B
ILE
12
B
ILE
12
9
1_555
B
GLY
13
B
GLY
13
9
1_555
B
CYS
14
B
CYS
14
9
1_555
B
ALA
15
B
ALA
15
9
1_555
B
ILE
16
B
ILE
16
9
1_555
B
CYS
17
B
CYS
17
9
1_555
B
ALA
33
B
ALA
33
9
1_555
B
CYS
56
B
CYS
56
9
1_555
B
MET
27
B
MET
27
1
1_555
A
SER
59
A
SER
59
2
2_564
B
GLU
38
B
GLU
38
2
1_555
19
P 21 21 21