0.025549
0.014751
0.000000
0.000000
0.029502
0.000000
0.000000
0.000000
0.008461
0.00000
0.00000
0.00000
Linkner, J.
Witte, G.
Curth, U.
Faix, J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
39.140
39.140
118.190
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C6 H14 O2
118.174
(4S)-2-METHYL-2,4-PENTANEDIOL
non-polymer
C6 H14 O2
118.174
(4R)-2-METHYLPENTANE-2,4-DIOL
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CA
N
75
N
N
N
76
S
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
C
N
81
N
C
N
82
N
O
N
83
N
N
N
84
N
O
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
N
N
96
S
C
N
97
N
C
N
98
N
O
N
99
N
C
N
100
N
C
N
101
N
C
N
102
N
O
N
103
N
O
N
104
N
O
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
N
N
115
N
C
N
116
N
C
N
117
N
O
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
O
N
125
N
H
N
126
N
H
N
127
N
N
N
128
S
C
N
129
N
C
N
130
N
O
N
131
S
C
N
132
N
C
N
133
N
C
N
134
N
C
N
135
N
O
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
N
N
150
S
C
N
151
N
C
N
152
N
O
N
153
N
C
N
154
N
C
N
155
N
C
N
156
N
C
N
157
N
O
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
N
N
172
S
C
N
173
N
C
N
174
N
O
N
175
N
C
N
176
N
C
N
177
N
C
N
178
N
C
N
179
N
N
N
180
N
O
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
N
N
197
S
C
N
198
N
C
N
199
N
O
N
200
N
C
N
201
N
C
N
202
N
S
N
203
N
C
N
204
N
O
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
C
N
217
N
C
N
218
N
O
N
219
N
C
N
220
N
C
N
221
S
C
N
222
N
O
N
223
N
C
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
C
N
239
N
C
N
240
N
O
N
241
N
C
N
242
N
C
N
243
R
C
N
244
N
O
N
245
N
C
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
N
N
261
S
C
N
262
N
C
N
263
N
O
N
264
N
C
Y
265
N
C
Y
266
N
C
Y
267
N
C
Y
268
N
C
Y
269
N
C
Y
270
N
C
N
271
N
O
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
N
N
284
S
C
N
285
N
C
N
286
N
O
N
287
N
C
N
288
N
C
N
289
N
C
N
290
N
O
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
N
N
301
S
C
N
302
N
C
N
303
N
O
N
304
N
C
N
305
N
O
N
306
N
O
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
N
N
315
S
C
N
316
N
C
N
317
N
O
N
318
R
C
N
319
N
O
N
320
N
C
N
321
N
O
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
N
N
332
S
C
N
333
N
C
N
334
N
O
N
335
N
C
Y
336
N
C
Y
337
N
C
Y
338
N
C
Y
339
N
N
Y
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
C
Y
344
N
C
N
345
N
O
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
N
C
Y
363
N
C
Y
364
N
C
Y
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
C
N
369
N
O
N
370
N
O
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
N
N
383
S
C
N
384
N
C
N
385
N
O
N
386
N
C
N
387
N
C
N
388
N
C
N
389
N
O
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
doub
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
doub
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
doub
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
Y
256
N
doub
Y
257
N
sing
Y
258
N
sing
N
259
N
sing
Y
260
N
doub
N
261
N
sing
Y
262
N
doub
N
263
N
sing
Y
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
doub
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
doub
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
doub
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
doub
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
Y
325
N
doub
Y
326
N
sing
Y
327
N
sing
N
328
N
sing
Y
329
N
doub
Y
330
N
sing
Y
331
N
sing
N
332
N
sing
Y
333
N
sing
Y
334
N
doub
N
335
N
sing
Y
336
N
doub
N
337
N
sing
Y
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
doub
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
Y
353
N
doub
Y
354
N
sing
Y
355
N
sing
N
356
N
sing
Y
357
N
doub
N
358
N
sing
Y
359
N
doub
N
360
N
sing
Y
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
doub
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
US
Plos One
1932-6203
6
e21327
e21327
10.1371/journal.pone.0021327
21701600
High-resolution X-ray structure of the trimeric Scar/WAVE-complex precursor Brk1.
2011
10.2210/pdb3pp5/pdb
pdb_00003pp5
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
100
1
CCD
2009-08-15
MARMOSAIC 225 mm CCD
CCD
2009-07-10
MARMOSAIC 225 mm CCD
Bartels Monochromator (Si 111)
SINGLE WAVELENGTH
M
x-ray
1
Silicon 111 crystal
SINGLE WAVELENGTH
M
x-ray
1
1.0722
1.0
0.8726
1.0
X06DA
SLS
1.0722
SYNCHROTRON
SLS BEAMLINE X06DA
ID23-2
ESRF
0.8726
SYNCHROTRON
ESRF BEAMLINE ID23-2
8619.741
Brk1
1
man
polymer
118.174
(4S)-2-METHYL-2,4-PENTANEDIOL
1
syn
non-polymer
118.174
(4R)-2-METHYLPENTANE-2,4-DIOL
1
syn
non-polymer
40.078
CALCIUM ION
2
syn
non-polymer
18.015
water
107
nat
water
Protein BRICK1
no
no
GPLGSMSTKTNIQKDWEQREFIEDMSINIQKIVEFLNKFELSTRNKLSDLNEKLTILDRQVDYLEATFKTVQE
GPLGSMSTKTNIQKDWEQREFIEDMSINIQKIVEFLNKFELSTRNKLSDLNEKLTILDRQVDYLEATFKTVQE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
slime mold
sample
brk1, DDB_G0279175, hspc300
44689
Dictyostelium discoideum
469008
Escherichia coli
BL21(DE3) rosetta
Plasmid
pGEX6p1
2
3.03
59.43
VAPOR DIFFUSION, HANGING DROP
7.3
40% (v/v) MPD, 0.2 M CaCl2, pH 7.3, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
software
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Database references
Refinement description
Data collection
Database references
Derived calculations
1
0
2011-06-08
1
1
2011-07-13
1
2
2012-03-28
1
3
2017-11-08
1
4
2024-02-21
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2010-11-24
REL
REL
MPD
(4S)-2-METHYL-2,4-PENTANEDIOL
MRD
(4R)-2-METHYLPENTANE-2,4-DIOL
CA
CALCIUM ION
HOH
water
MPD
69
2
MPD
MPD
69
A
MRD
70
3
MRD
MRD
70
A
CA
71
4
CA
CA
71
A
CA
72
4
CA
CA
72
A
HOH
73
5
HOH
HOH
73
A
HOH
74
5
HOH
HOH
74
A
HOH
75
5
HOH
HOH
75
A
HOH
76
5
HOH
HOH
76
A
HOH
77
5
HOH
HOH
77
A
HOH
78
5
HOH
HOH
78
A
HOH
79
5
HOH
HOH
79
A
HOH
80
5
HOH
HOH
80
A
HOH
81
5
HOH
HOH
81
A
HOH
82
5
HOH
HOH
82
A
HOH
83
5
HOH
HOH
83
A
HOH
84
5
HOH
HOH
84
A
HOH
85
5
HOH
HOH
85
A
HOH
86
5
HOH
HOH
86
A
HOH
87
5
HOH
HOH
87
A
HOH
88
5
HOH
HOH
88
A
HOH
89
5
HOH
HOH
89
A
HOH
90
5
HOH
HOH
90
A
HOH
91
5
HOH
HOH
91
A
HOH
92
5
HOH
HOH
92
A
HOH
93
5
HOH
HOH
93
A
HOH
94
5
HOH
HOH
94
A
HOH
95
5
HOH
HOH
95
A
HOH
96
5
HOH
HOH
96
A
HOH
97
5
HOH
HOH
97
A
HOH
98
5
HOH
HOH
98
A
HOH
99
5
HOH
HOH
99
A
HOH
100
5
HOH
HOH
100
A
HOH
101
5
HOH
HOH
101
A
HOH
102
5
HOH
HOH
102
A
HOH
103
5
HOH
HOH
103
A
HOH
104
5
HOH
HOH
104
A
HOH
105
5
HOH
HOH
105
A
HOH
106
5
HOH
HOH
106
A
HOH
107
5
HOH
HOH
107
A
HOH
108
5
HOH
HOH
108
A
HOH
109
5
HOH
HOH
109
A
HOH
110
5
HOH
HOH
110
A
HOH
111
5
HOH
HOH
111
A
HOH
112
5
HOH
HOH
112
A
HOH
113
5
HOH
HOH
113
A
HOH
114
5
HOH
HOH
114
A
HOH
115
5
HOH
HOH
115
A
HOH
116
5
HOH
HOH
116
A
HOH
117
5
HOH
HOH
117
A
HOH
118
5
HOH
HOH
118
A
HOH
119
5
HOH
HOH
119
A
HOH
120
5
HOH
HOH
120
A
HOH
121
5
HOH
HOH
121
A
HOH
122
5
HOH
HOH
122
A
HOH
123
5
HOH
HOH
123
A
HOH
124
5
HOH
HOH
124
A
HOH
125
5
HOH
HOH
125
A
HOH
126
5
HOH
HOH
126
A
HOH
127
5
HOH
HOH
127
A
HOH
128
5
HOH
HOH
128
A
HOH
129
5
HOH
HOH
129
A
HOH
130
5
HOH
HOH
130
A
HOH
131
5
HOH
HOH
131
A
HOH
132
5
HOH
HOH
132
A
HOH
133
5
HOH
HOH
133
A
HOH
134
5
HOH
HOH
134
A
HOH
135
5
HOH
HOH
135
A
HOH
136
5
HOH
HOH
136
A
HOH
137
5
HOH
HOH
137
A
HOH
138
5
HOH
HOH
138
A
HOH
139
5
HOH
HOH
139
A
HOH
140
5
HOH
HOH
140
A
HOH
141
5
HOH
HOH
141
A
HOH
142
5
HOH
HOH
142
A
HOH
143
5
HOH
HOH
143
A
HOH
144
5
HOH
HOH
144
A
HOH
145
5
HOH
HOH
145
A
HOH
146
5
HOH
HOH
146
A
HOH
147
5
HOH
HOH
147
A
HOH
148
5
HOH
HOH
148
A
HOH
149
5
HOH
HOH
149
A
HOH
150
5
HOH
HOH
150
A
HOH
151
5
HOH
HOH
151
A
HOH
152
5
HOH
HOH
152
A
HOH
153
5
HOH
HOH
153
A
HOH
154
5
HOH
HOH
154
A
HOH
155
5
HOH
HOH
155
A
HOH
156
5
HOH
HOH
156
A
HOH
157
5
HOH
HOH
157
A
HOH
158
5
HOH
HOH
158
A
HOH
159
5
HOH
HOH
159
A
HOH
160
5
HOH
HOH
160
A
HOH
161
5
HOH
HOH
161
A
HOH
162
5
HOH
HOH
162
A
HOH
163
5
HOH
HOH
163
A
HOH
164
5
HOH
HOH
164
A
HOH
165
5
HOH
HOH
165
A
HOH
166
5
HOH
HOH
166
A
HOH
167
5
HOH
HOH
167
A
HOH
168
5
HOH
HOH
168
A
HOH
169
5
HOH
HOH
169
A
HOH
170
5
HOH
HOH
170
A
HOH
171
5
HOH
HOH
171
A
HOH
172
5
HOH
HOH
172
A
HOH
173
5
HOH
HOH
173
A
HOH
174
5
HOH
HOH
174
A
HOH
175
5
HOH
HOH
175
A
HOH
176
5
HOH
HOH
176
A
HOH
177
5
HOH
HOH
177
A
HOH
178
5
HOH
HOH
178
A
HOH
179
5
HOH
HOH
179
A
n
1
-4
A
n
2
-3
A
n
3
-2
A
n
4
-1
A
n
5
0
A
n
6
1
A
n
7
2
A
THR
3
n
8
THR
3
A
LYS
4
n
9
LYS
4
A
THR
5
n
10
THR
5
A
ASN
6
n
11
ASN
6
A
ILE
7
n
12
ILE
7
A
GLN
8
n
13
GLN
8
A
LYS
9
n
14
LYS
9
A
ASP
10
n
15
ASP
10
A
TRP
11
n
16
TRP
11
A
GLU
12
n
17
GLU
12
A
GLN
13
n
18
GLN
13
A
ARG
14
n
19
ARG
14
A
GLU
15
n
20
GLU
15
A
PHE
16
n
21
PHE
16
A
ILE
17
n
22
ILE
17
A
GLU
18
n
23
GLU
18
A
ASP
19
n
24
ASP
19
A
MET
20
n
25
MET
20
A
SER
21
n
26
SER
21
A
ILE
22
n
27
ILE
22
A
ASN
23
n
28
ASN
23
A
ILE
24
n
29
ILE
24
A
GLN
25
n
30
GLN
25
A
LYS
26
n
31
LYS
26
A
ILE
27
n
32
ILE
27
A
VAL
28
n
33
VAL
28
A
GLU
29
n
34
GLU
29
A
PHE
30
n
35
PHE
30
A
LEU
31
n
36
LEU
31
A
ASN
32
n
37
ASN
32
A
LYS
33
n
38
LYS
33
A
PHE
34
n
39
PHE
34
A
GLU
35
n
40
GLU
35
A
LEU
36
n
41
LEU
36
A
SER
37
n
42
SER
37
A
THR
38
n
43
THR
38
A
ARG
39
n
44
ARG
39
A
ASN
40
n
45
ASN
40
A
LYS
41
n
46
LYS
41
A
LEU
42
n
47
LEU
42
A
SER
43
n
48
SER
43
A
ASP
44
n
49
ASP
44
A
LEU
45
n
50
LEU
45
A
ASN
46
n
51
ASN
46
A
GLU
47
n
52
GLU
47
A
LYS
48
n
53
LYS
48
A
LEU
49
n
54
LEU
49
A
THR
50
n
55
THR
50
A
ILE
51
n
56
ILE
51
A
LEU
52
n
57
LEU
52
A
ASP
53
n
58
ASP
53
A
ARG
54
n
59
ARG
54
A
GLN
55
n
60
GLN
55
A
VAL
56
n
61
VAL
56
A
ASP
57
n
62
ASP
57
A
TYR
58
n
63
TYR
58
A
LEU
59
n
64
LEU
59
A
GLU
60
n
65
GLU
60
A
ALA
61
n
66
ALA
61
A
THR
62
n
67
THR
62
A
PHE
63
n
68
PHE
63
A
LYS
64
n
69
LYS
64
A
THR
65
n
70
THR
65
A
n
71
66
A
n
72
67
A
n
73
68
A
-0.0514
-0.0002
-0.2194
0.2143
0.4286
0.3073
0.0010
0.0128
0.0184
0.0140
0.0410
-0.0281
-0.0625
-0.0246
0.0073
0.0800
-0.0017
-0.0031
0.0661
-0.0035
0.0801
refined
18.0149
-6.0166
17.0839
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
All
author_and_software_defined_assembly
PISA
3
trimeric
8200
-179
13130
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_545
-y,x-y-1,z
crystal symmetry operation
19.5700000000
-33.8962343041
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
3_655
-x+y+1,-x,z
crystal symmetry operation
39.1400000000
0.0000000000
0.0000000000
1
A
GLY
-4
A
GLY
1
1
Y
1
A
PRO
-3
A
PRO
2
1
Y
1
A
LEU
-2
A
LEU
3
1
Y
1
A
GLY
-1
A
GLY
4
1
Y
1
A
SER
0
A
SER
5
1
Y
1
A
MET
1
A
MET
6
1
Y
1
A
SER
2
A
SER
7
1
Y
1
A
VAL
66
A
VAL
71
1
Y
1
A
GLN
67
A
GLN
72
1
Y
1
A
GLU
68
A
GLU
73
1
Y
1
A
A
OD1
O
ASN
HOH
46
110
2.06
B
2.4388
-0.0000
-0.0000
2.4388
-0.0000
-4.8777
0.1817
0.1589
0.1601
1.500
19.389
806
16414
16144
4.99
98.65
0.14
random
1,2
2.04
SAD, MOLECULAR REPLACEMENT
0.90
1.11
Engh & Huber
FLAT BULK SOLVENT MODEL
64.614
0.384
1.500
19.389
107
661
18
0
536
0.013
621
1.245
843
15.787
248
0.074
94
0.005
108
0.1673
0.1567
1.5940
131
2504
98.00
0.1746
0.1510
1.7170
135
2559
99.00
0.1838
0.1618
1.8897
135
2575
99.00
0.1941
0.1424
2.1628
135
2568
99.00
0.1694
0.1461
2.7237
136
2582
99.00
0.1805
0.1663
19.3906
134
2550
97.00
22.7
1.5
20
3PP5
16414
16181
-3
0.05
1,2
30.4
12.5
98.6
1.5
1.54
8.95
0.27
1,2
12.09
97.4
data collection
MAR345dtb
model building
SHELX
(anomalous dataset)
model building
ARP/wARP
refinement
PHENIX
(phenix.refine: 1.6_289)
data reduction
XDS
data scaling
XSCALE
phasing
SHELX
(anomalous dataset)
High-resolution structure of the trimeric Scar/WAVE complex precursor Brk1
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
5
N
N
A
THR
5
A
THR
10
HELX_P
A
THR
65
A
THR
70
1
1
61
STRUCTURAL PROTEIN
triple coiled-coil, precursor of the Scar-WAVE complex, Abi, Scar, STRUCTURAL PROTEIN
BRK1_DICDI
UNP
1
1
Q54X65
MSTKTNIQKDWEQREFIEDMSINIQKIVEFLNKFELSTRNKLSDLNEKLTILDRQVDYLEATFKTVQE
1
68
3PP5
1
68
Q54X65
A
1
6
73
1
expression tag
GLY
-4
3PP5
A
Q54X65
UNP
1
1
expression tag
PRO
-3
3PP5
A
Q54X65
UNP
2
1
expression tag
LEU
-2
3PP5
A
Q54X65
UNP
3
1
expression tag
GLY
-1
3PP5
A
Q54X65
UNP
4
1
expression tag
SER
0
3PP5
A
Q54X65
UNP
5
BINDING SITE FOR RESIDUE MPD A 69
A
MPD
69
Software
5
BINDING SITE FOR RESIDUE MRD A 70
A
MRD
70
Software
3
BINDING SITE FOR RESIDUE CA A 71
A
CA
71
Software
6
BINDING SITE FOR RESIDUE CA A 72
A
CA
72
Software
6
A
TRP
11
A
TRP
16
5
4_654
A
LYS
48
A
LYS
53
5
1_555
A
ASP
53
A
ASP
58
5
3_655
A
HOH
79
F
HOH
5
1_555
A
HOH
126
F
HOH
5
4_654
A
PHE
30
A
PHE
35
3
1_555
A
ASN
32
A
ASN
37
3
3_655
A
HOH
106
F
HOH
3
1_555
A
GLU
15
A
GLU
20
6
1_555
A
GLU
18
A
GLU
23
6
1_555
A
ASP
57
A
ASP
62
6
6_555
A
HOH
87
F
HOH
6
6_555
A
HOH
98
F
HOH
6
6_555
A
HOH
114
F
HOH
6
1_555
A
GLU
15
A
GLU
20
6
1_555
A
GLU
18
A
GLU
23
6
1_555
A
ASP
57
A
ASP
62
6
6_555
A
GLU
60
A
GLU
65
6
6_555
A
HOH
84
F
HOH
6
6_555
A
HOH
86
F
HOH
6
6_555
173
P 63