0.028785
0.000000
0.001821
0.000000
0.014325
0.000000
0.000000
0.000000
0.014382
0.00000
0.00000
0.00000
Bacik, J.P.
James, T.W.
Frias-Staheli, N.
Garcia-Sastre, A.
Mark, B.L.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.00
93.62
90.00
34.740
69.810
69.670
C3 H8 Br N
138.006
1.7.6 3-bromanylpropan-1-amine
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
BR
N
2
N
C
N
3
N
C
N
4
N
C
N
5
N
N
N
6
N
H
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
O
N
20
N
H
N
21
N
H
N
22
N
H
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
N
N
28
S
C
N
29
N
C
N
30
N
O
N
31
N
C
N
32
N
C
N
33
N
C
N
34
N
N
N
35
N
C
N
36
N
N
N
37
N
N
N
38
N
O
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
N
N
55
S
C
N
56
N
C
N
57
N
O
N
58
N
C
N
59
N
C
N
60
N
O
N
61
N
N
N
62
N
O
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
N
N
72
S
C
N
73
N
C
N
74
N
O
N
75
N
C
N
76
N
C
N
77
N
O
N
78
N
O
N
79
N
O
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
N
N
88
R
C
N
89
N
C
N
90
N
O
N
91
N
C
N
92
N
S
N
93
N
O
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
N
N
102
S
C
N
103
N
C
N
104
N
O
N
105
N
C
N
106
N
C
N
107
N
C
N
108
N
O
N
109
N
N
N
110
N
O
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
N
N
122
S
C
N
123
N
C
N
124
N
O
N
125
N
C
N
126
N
C
N
127
N
C
N
128
N
O
N
129
N
O
N
130
N
O
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
N
N
141
N
C
N
142
N
C
N
143
N
O
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
C
N
151
N
O
N
152
N
C
N
153
N
O
N
154
N
C
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
N
N
165
S
C
N
166
N
C
N
167
N
O
N
168
N
C
Y
169
N
C
Y
170
N
N
Y
171
N
C
Y
172
N
C
Y
173
N
N
N
174
N
O
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
O
N
186
N
H
N
187
N
H
N
188
N
N
N
189
S
C
N
190
N
C
N
191
N
O
N
192
S
C
N
193
N
C
N
194
N
C
N
195
N
C
N
196
N
O
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
N
N
211
S
C
N
212
N
C
N
213
N
O
N
214
N
C
N
215
N
C
N
216
N
C
N
217
N
C
N
218
N
O
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
N
N
233
S
C
N
234
N
C
N
235
N
O
N
236
N
C
N
237
N
C
N
238
N
C
N
239
N
C
N
240
N
N
N
241
N
O
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
N
N
258
S
C
N
259
N
C
N
260
N
O
N
261
N
C
N
262
N
C
N
263
N
S
N
264
N
C
N
265
N
O
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
N
N
278
S
C
N
279
N
C
N
280
N
O
N
281
N
C
Y
282
N
C
Y
283
N
C
Y
284
N
C
Y
285
N
C
Y
286
N
C
Y
287
N
C
N
288
N
O
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
N
N
301
S
C
N
302
N
C
N
303
N
O
N
304
N
C
N
305
N
C
N
306
N
C
N
307
N
O
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
N
N
318
S
C
N
319
N
C
N
320
N
O
N
321
N
C
N
322
N
O
N
323
N
O
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
N
N
332
S
C
N
333
N
C
N
334
N
O
N
335
R
C
N
336
N
O
N
337
N
C
N
338
N
O
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
N
Y
357
N
C
Y
358
N
C
Y
359
N
C
Y
360
N
C
Y
361
N
C
N
362
N
O
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
N
N
376
S
C
N
377
N
C
N
378
N
O
N
379
N
C
Y
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
C
Y
385
N
C
N
386
N
O
N
387
N
O
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
N
N
400
S
C
N
401
N
C
N
402
N
O
N
403
N
C
N
404
N
C
N
405
N
C
N
406
N
O
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
doub
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
doub
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
doub
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
doub
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
doub
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
doub
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
doub
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
doub
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
Y
165
N
sing
Y
166
N
doub
Y
167
N
doub
N
168
N
sing
Y
169
N
sing
N
170
N
sing
Y
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
doub
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
doub
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
doub
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
doub
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
Y
273
N
doub
Y
274
N
sing
Y
275
N
sing
N
276
N
sing
Y
277
N
doub
N
278
N
sing
Y
279
N
doub
N
280
N
sing
Y
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
doub
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
doub
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
doub
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
doub
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
Y
342
N
doub
Y
343
N
sing
Y
344
N
sing
N
345
N
sing
Y
346
N
doub
Y
347
N
sing
Y
348
N
sing
N
349
N
sing
Y
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
doub
N
354
N
sing
Y
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
doub
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
Y
370
N
doub
Y
371
N
sing
Y
372
N
sing
N
373
N
sing
Y
374
N
doub
N
375
N
sing
Y
376
N
doub
N
377
N
sing
Y
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
doub
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
108
2222
2227
10.1073/pnas.1013388108
21245344
Structural basis for the removal of ubiquitin and interferon-stimulated gene 15 by a viral ovarian tumor domain-containing protease.
2011
10.2210/pdb3pse/pdb
pdb_00003pse
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2010-02-06
RAYONIX MX-300
SINGLE WAVELENGTH
M
x-ray
1
0.9795
1.0
08ID-1
CLSI
0.9795
SYNCHROTRON
CLSI BEAMLINE 08ID-1
19480.807
RNA polymerase
OTU domain (UNP residues 1-169)
1
man
polymer
17117.611
Ubiquitin-like protein ISG15
C78S
1
man
polymer
138.006
1.7.6 3-bromanylpropan-1-amine
1
syn
non-polymer
92.094
GLYCEROL
1
syn
non-polymer
18.015
water
139
nat
water
Interferon-induced 15 kDa protein, Interferon-induced 17 kDa protein, IP17, Ubiquitin cross-reactive protein, hUCRP
no
no
GPMDFLRSLDWTQVIAGQYVSNPRFNISDYFEIVRQPGDGNCFYHSIAELTMPNKTDHSYHYIKRLTESAARKYYQEEPE
ARLVGLSLEDYLKRMLSDNEWGSTLEASMLAKEMGITIIIWTVAASDEVEAGIKFGDGDVFTAVNLLHSGQTHFDALRIL
PQFETDTREAL
GPMDFLRSLDWTQVIAGQYVSNPRFNISDYFEIVRQPGDGNCFYHSIAELTMPNKTDHSYHYIKRLTESAARKYYQEEPE
ARLVGLSLEDYLKRMLSDNEWGSTLEASMLAKEMGITIIIWTVAASDEVEAGIKFGDGDVFTAVNLLHSGQTHFDALRIL
PQFETDTREAL
A
polypeptide(L)
no
no
MGWDLTVKMLAGNEFQVSLSSSMSVSELKAQITQKIGVHAFQQRLAVHPSGVALQDRVPLASQGLGPGSTVLLVVDKSDE
PLNILVRNNKGRSSTYEVRLTQTVAHLKQQVSGLEGVQDDLFWLTFEGKPLEDQLPLGEYGLKPLSTVFMNLRLRG
MGWDLTVKMLAGNEFQVSLSSSMSVSELKAQITQKIGVHAFQQRLAVHPSGVALQDRVPLASQGLGPGSTVLLVVDKSDE
PLNILVRNNKGRSSTYEVRLTQTVAHLKQQVSGLEGVQDDLFWLTFEGKPLEDQLPLGEYGLKPLSTVFMNLRLRG
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
11593
Crimean-Congo hemorrhagic fever virus
562
Escherichia coli
human
sample
ISG15, G1P2, UCRP
9606
Homo sapiens
562
Escherichia coli
1
2.30
46.61
VAPOR DIFFUSION, HANGING DROP
6.4
100 mM MES, 23% PEG6000, pH 6.4, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
atom_site
chem_comp
database_2
entity
pdbx_distant_solvent_atoms
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
struct_conn
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Advisory
Atomic model
Data collection
Database references
Derived calculations
Non-polymer description
Structure summary
Data collection
Refinement description
1
0
2011-01-19
1
1
2011-07-13
2
0
2023-05-31
2
1
2023-09-20
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.id
_chem_comp.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_entity.formula_weight
_entity.pdbx_description
_pdbx_entity_nonpoly.comp_id
_pdbx_entity_nonpoly.name
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_mon_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_ref_seq_dif.details
_struct_site.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Viral OTU domain protease bound to Ubiquitin
HELIX
DETERMINATION METHOD: AUTHOR DETERMINED
SHEET
DETERMINATION METHOD: AUTHOR DETERMINED
RCSB
Y
RCSB
2010-12-01
REL
REL
1
A
O
HOH
232
6.26
1
A
O
HOH
243
6.47
4LJ
1.7.6 3-bromanylpropan-1-amine
GOL
GLYCEROL
HOH
water
S83N IS A NATURAL VARIANT
1Z2M
PDB ENTRIES 1Z2M AND 3PT2
PDB
experimental model
3PT2
PDB ENTRIES 1Z2M AND 3PT2
PDB
experimental model
3CN
157
3
4LJ
4LJ
157
B
GOL
1344
4
GOL
GOL
1344
B
HOH
170
5
HOH
HOH
170
A
HOH
171
5
HOH
HOH
171
A
HOH
172
5
HOH
HOH
172
A
HOH
173
5
HOH
HOH
173
A
HOH
174
5
HOH
HOH
174
A
HOH
175
5
HOH
HOH
175
A
HOH
176
5
HOH
HOH
176
A
HOH
177
5
HOH
HOH
177
A
HOH
178
5
HOH
HOH
178
A
HOH
179
5
HOH
HOH
179
A
HOH
180
5
HOH
HOH
180
A
HOH
181
5
HOH
HOH
181
A
HOH
182
5
HOH
HOH
182
A
HOH
183
5
HOH
HOH
183
A
HOH
184
5
HOH
HOH
184
A
HOH
185
5
HOH
HOH
185
A
HOH
186
5
HOH
HOH
186
A
HOH
187
5
HOH
HOH
187
A
HOH
188
5
HOH
HOH
188
A
HOH
189
5
HOH
HOH
189
A
HOH
190
5
HOH
HOH
190
A
HOH
191
5
HOH
HOH
191
A
HOH
192
5
HOH
HOH
192
A
HOH
193
5
HOH
HOH
193
A
HOH
194
5
HOH
HOH
194
A
HOH
195
5
HOH
HOH
195
A
HOH
196
5
HOH
HOH
196
A
HOH
197
5
HOH
HOH
197
A
HOH
198
5
HOH
HOH
198
A
HOH
199
5
HOH
HOH
199
A
HOH
200
5
HOH
HOH
200
A
HOH
201
5
HOH
HOH
201
A
HOH
202
5
HOH
HOH
202
A
HOH
203
5
HOH
HOH
203
A
HOH
204
5
HOH
HOH
204
A
HOH
205
5
HOH
HOH
205
A
HOH
206
5
HOH
HOH
206
A
HOH
207
5
HOH
HOH
207
A
HOH
208
5
HOH
HOH
208
A
HOH
209
5
HOH
HOH
209
A
HOH
210
5
HOH
HOH
210
A
HOH
211
5
HOH
HOH
211
A
HOH
212
5
HOH
HOH
212
A
HOH
213
5
HOH
HOH
213
A
HOH
214
5
HOH
HOH
214
A
HOH
215
5
HOH
HOH
215
A
HOH
216
5
HOH
HOH
216
A
HOH
217
5
HOH
HOH
217
A
HOH
218
5
HOH
HOH
218
A
HOH
219
5
HOH
HOH
219
A
HOH
220
5
HOH
HOH
220
A
HOH
221
5
HOH
HOH
221
A
HOH
222
5
HOH
HOH
222
A
HOH
223
5
HOH
HOH
223
A
HOH
224
5
HOH
HOH
224
A
HOH
225
5
HOH
HOH
225
A
HOH
226
5
HOH
HOH
226
A
HOH
227
5
HOH
HOH
227
A
HOH
228
5
HOH
HOH
228
A
HOH
229
5
HOH
HOH
229
A
HOH
230
5
HOH
HOH
230
A
HOH
231
5
HOH
HOH
231
A
HOH
232
5
HOH
HOH
232
A
HOH
233
5
HOH
HOH
233
A
HOH
234
5
HOH
HOH
234
A
HOH
235
5
HOH
HOH
235
A
HOH
236
5
HOH
HOH
236
A
HOH
237
5
HOH
HOH
237
A
HOH
238
5
HOH
HOH
238
A
HOH
239
5
HOH
HOH
239
A
HOH
240
5
HOH
HOH
240
A
HOH
241
5
HOH
HOH
241
A
HOH
242
5
HOH
HOH
242
A
HOH
243
5
HOH
HOH
243
A
HOH
244
5
HOH
HOH
244
A
HOH
245
5
HOH
HOH
245
A
HOH
246
5
HOH
HOH
246
A
HOH
247
5
HOH
HOH
247
A
HOH
158
5
HOH
HOH
158
B
HOH
159
5
HOH
HOH
159
B
HOH
160
5
HOH
HOH
160
B
HOH
161
5
HOH
HOH
161
B
HOH
162
5
HOH
HOH
162
B
HOH
163
5
HOH
HOH
163
B
HOH
164
5
HOH
HOH
164
B
HOH
165
5
HOH
HOH
165
B
HOH
166
5
HOH
HOH
166
B
HOH
167
5
HOH
HOH
167
B
HOH
168
5
HOH
HOH
168
B
HOH
169
5
HOH
HOH
169
B
HOH
170
5
HOH
HOH
170
B
HOH
171
5
HOH
HOH
171
B
HOH
172
5
HOH
HOH
172
B
HOH
173
5
HOH
HOH
173
B
HOH
174
5
HOH
HOH
174
B
HOH
175
5
HOH
HOH
175
B
HOH
176
5
HOH
HOH
176
B
HOH
177
5
HOH
HOH
177
B
HOH
178
5
HOH
HOH
178
B
HOH
179
5
HOH
HOH
179
B
HOH
180
5
HOH
HOH
180
B
HOH
181
5
HOH
HOH
181
B
HOH
182
5
HOH
HOH
182
B
HOH
183
5
HOH
HOH
183
B
HOH
184
5
HOH
HOH
184
B
HOH
185
5
HOH
HOH
185
B
HOH
186
5
HOH
HOH
186
B
HOH
187
5
HOH
HOH
187
B
HOH
188
5
HOH
HOH
188
B
HOH
189
5
HOH
HOH
189
B
HOH
190
5
HOH
HOH
190
B
HOH
191
5
HOH
HOH
191
B
HOH
192
5
HOH
HOH
192
B
HOH
193
5
HOH
HOH
193
B
HOH
194
5
HOH
HOH
194
B
HOH
195
5
HOH
HOH
195
B
HOH
196
5
HOH
HOH
196
B
HOH
197
5
HOH
HOH
197
B
HOH
198
5
HOH
HOH
198
B
HOH
199
5
HOH
HOH
199
B
HOH
200
5
HOH
HOH
200
B
HOH
201
5
HOH
HOH
201
B
HOH
202
5
HOH
HOH
202
B
HOH
203
5
HOH
HOH
203
B
HOH
204
5
HOH
HOH
204
B
HOH
205
5
HOH
HOH
205
B
HOH
206
5
HOH
HOH
206
B
HOH
207
5
HOH
HOH
207
B
HOH
208
5
HOH
HOH
208
B
HOH
209
5
HOH
HOH
209
B
HOH
210
5
HOH
HOH
210
B
HOH
211
5
HOH
HOH
211
B
HOH
212
5
HOH
HOH
212
B
HOH
213
5
HOH
HOH
213
B
HOH
214
5
HOH
HOH
214
B
HOH
215
5
HOH
HOH
215
B
HOH
216
5
HOH
HOH
216
B
HOH
217
5
HOH
HOH
217
B
HOH
248
5
HOH
HOH
248
B
GLY
-1
n
1
GLY
-1
A
PRO
0
n
2
PRO
0
A
MET
1
n
3
MET
1
A
ASP
2
n
4
ASP
2
A
PHE
3
n
5
PHE
3
A
LEU
4
n
6
LEU
4
A
ARG
5
n
7
ARG
5
A
SER
6
n
8
SER
6
A
LEU
7
n
9
LEU
7
A
ASP
8
n
10
ASP
8
A
TRP
9
n
11
TRP
9
A
THR
10
n
12
THR
10
A
GLN
11
n
13
GLN
11
A
VAL
12
n
14
VAL
12
A
ILE
13
n
15
ILE
13
A
ALA
14
n
16
ALA
14
A
GLY
15
n
17
GLY
15
A
GLN
16
n
18
GLN
16
A
TYR
17
n
19
TYR
17
A
VAL
18
n
20
VAL
18
A
SER
19
n
21
SER
19
A
ASN
20
n
22
ASN
20
A
PRO
21
n
23
PRO
21
A
ARG
22
n
24
ARG
22
A
PHE
23
n
25
PHE
23
A
ASN
24
n
26
ASN
24
A
ILE
25
n
27
ILE
25
A
SER
26
n
28
SER
26
A
ASP
27
n
29
ASP
27
A
TYR
28
n
30
TYR
28
A
PHE
29
n
31
PHE
29
A
GLU
30
n
32
GLU
30
A
ILE
31
n
33
ILE
31
A
VAL
32
n
34
VAL
32
A
ARG
33
n
35
ARG
33
A
GLN
34
n
36
GLN
34
A
PRO
35
n
37
PRO
35
A
GLY
36
n
38
GLY
36
A
ASP
37
n
39
ASP
37
A
GLY
38
n
40
GLY
38
A
ASN
39
n
41
ASN
39
A
CYS
40
n
42
CYS
40
A
PHE
41
n
43
PHE
41
A
TYR
42
n
44
TYR
42
A
HIS
43
n
45
HIS
43
A
SER
44
n
46
SER
44
A
ILE
45
n
47
ILE
45
A
ALA
46
n
48
ALA
46
A
GLU
47
n
49
GLU
47
A
LEU
48
n
50
LEU
48
A
THR
49
n
51
THR
49
A
MET
50
n
52
MET
50
A
PRO
51
n
53
PRO
51
A
ASN
52
n
54
ASN
52
A
LYS
53
n
55
LYS
53
A
THR
54
n
56
THR
54
A
ASP
55
n
57
ASP
55
A
HIS
56
n
58
HIS
56
A
SER
57
n
59
SER
57
A
TYR
58
n
60
TYR
58
A
HIS
59
n
61
HIS
59
A
TYR
60
n
62
TYR
60
A
ILE
61
n
63
ILE
61
A
LYS
62
n
64
LYS
62
A
ARG
63
n
65
ARG
63
A
LEU
64
n
66
LEU
64
A
THR
65
n
67
THR
65
A
GLU
66
n
68
GLU
66
A
SER
67
n
69
SER
67
A
ALA
68
n
70
ALA
68
A
ALA
69
n
71
ALA
69
A
ARG
70
n
72
ARG
70
A
LYS
71
n
73
LYS
71
A
TYR
72
n
74
TYR
72
A
TYR
73
n
75
TYR
73
A
GLN
74
n
76
GLN
74
A
GLU
75
n
77
GLU
75
A
GLU
76
n
78
GLU
76
A
PRO
77
n
79
PRO
77
A
GLU
78
n
80
GLU
78
A
ALA
79
n
81
ALA
79
A
ARG
80
n
82
ARG
80
A
LEU
81
n
83
LEU
81
A
VAL
82
n
84
VAL
82
A
GLY
83
n
85
GLY
83
A
LEU
84
n
86
LEU
84
A
SER
85
n
87
SER
85
A
LEU
86
n
88
LEU
86
A
GLU
87
n
89
GLU
87
A
ASP
88
n
90
ASP
88
A
TYR
89
n
91
TYR
89
A
LEU
90
n
92
LEU
90
A
LYS
91
n
93
LYS
91
A
ARG
92
n
94
ARG
92
A
MET
93
n
95
MET
93
A
LEU
94
n
96
LEU
94
A
SER
95
n
97
SER
95
A
ASP
96
n
98
ASP
96
A
ASN
97
n
99
ASN
97
A
GLU
98
n
100
GLU
98
A
TRP
99
n
101
TRP
99
A
GLY
100
n
102
GLY
100
A
SER
101
n
103
SER
101
A
THR
102
n
104
THR
102
A
LEU
103
n
105
LEU
103
A
GLU
104
n
106
GLU
104
A
ALA
105
n
107
ALA
105
A
SER
106
n
108
SER
106
A
MET
107
n
109
MET
107
A
LEU
108
n
110
LEU
108
A
ALA
109
n
111
ALA
109
A
LYS
110
n
112
LYS
110
A
GLU
111
n
113
GLU
111
A
MET
112
n
114
MET
112
A
GLY
113
n
115
GLY
113
A
ILE
114
n
116
ILE
114
A
THR
115
n
117
THR
115
A
ILE
116
n
118
ILE
116
A
ILE
117
n
119
ILE
117
A
ILE
118
n
120
ILE
118
A
TRP
119
n
121
TRP
119
A
THR
120
n
122
THR
120
A
VAL
121
n
123
VAL
121
A
ALA
122
n
124
ALA
122
A
ALA
123
n
125
ALA
123
A
SER
124
n
126
SER
124
A
ASP
125
n
127
ASP
125
A
GLU
126
n
128
GLU
126
A
VAL
127
n
129
VAL
127
A
GLU
128
n
130
GLU
128
A
ALA
129
n
131
ALA
129
A
GLY
130
n
132
GLY
130
A
ILE
131
n
133
ILE
131
A
LYS
132
n
134
LYS
132
A
PHE
133
n
135
PHE
133
A
GLY
134
n
136
GLY
134
A
ASP
135
n
137
ASP
135
A
GLY
136
n
138
GLY
136
A
ASP
137
n
139
ASP
137
A
VAL
138
n
140
VAL
138
A
PHE
139
n
141
PHE
139
A
THR
140
n
142
THR
140
A
ALA
141
n
143
ALA
141
A
VAL
142
n
144
VAL
142
A
ASN
143
n
145
ASN
143
A
LEU
144
n
146
LEU
144
A
LEU
145
n
147
LEU
145
A
HIS
146
n
148
HIS
146
A
SER
147
n
149
SER
147
A
GLY
148
n
150
GLY
148
A
GLN
149
n
151
GLN
149
A
THR
150
n
152
THR
150
A
HIS
151
n
153
HIS
151
A
PHE
152
n
154
PHE
152
A
ASP
153
n
155
ASP
153
A
ALA
154
n
156
ALA
154
A
LEU
155
n
157
LEU
155
A
ARG
156
n
158
ARG
156
A
ILE
157
n
159
ILE
157
A
LEU
158
n
160
LEU
158
A
PRO
159
n
161
PRO
159
A
GLN
160
n
162
GLN
160
A
PHE
161
n
163
PHE
161
A
GLU
162
n
164
GLU
162
A
n
165
163
A
n
166
164
A
n
167
165
A
n
168
166
A
n
169
167
A
n
170
168
A
n
171
169
A
n
1
1
B
n
2
2
B
n
3
3
B
ASP
4
n
4
ASP
4
B
LEU
5
n
5
LEU
5
B
THR
6
n
6
THR
6
B
VAL
7
n
7
VAL
7
B
LYS
8
n
8
LYS
8
B
MET
9
n
9
MET
9
B
LEU
10
n
10
LEU
10
B
ALA
11
n
11
ALA
11
B
GLY
12
n
12
GLY
12
B
ASN
13
n
13
ASN
13
B
GLU
14
n
14
GLU
14
B
PHE
15
n
15
PHE
15
B
GLN
16
n
16
GLN
16
B
VAL
17
n
17
VAL
17
B
SER
18
n
18
SER
18
B
LEU
19
n
19
LEU
19
B
n
20
20
B
n
21
21
B
n
22
22
B
MET
23
n
23
MET
23
B
SER
24
n
24
SER
24
B
VAL
25
n
25
VAL
25
B
SER
26
n
26
SER
26
B
GLU
27
n
27
GLU
27
B
LEU
28
n
28
LEU
28
B
LYS
29
n
29
LYS
29
B
ALA
30
n
30
ALA
30
B
GLN
31
n
31
GLN
31
B
ILE
32
n
32
ILE
32
B
THR
33
n
33
THR
33
B
GLN
34
n
34
GLN
34
B
LYS
35
n
35
LYS
35
B
ILE
36
n
36
ILE
36
B
GLY
37
n
37
GLY
37
B
VAL
38
n
38
VAL
38
B
HIS
39
n
39
HIS
39
B
ALA
40
n
40
ALA
40
B
PHE
41
n
41
PHE
41
B
GLN
42
n
42
GLN
42
B
GLN
43
n
43
GLN
43
B
ARG
44
n
44
ARG
44
B
LEU
45
n
45
LEU
45
B
ALA
46
n
46
ALA
46
B
VAL
47
n
47
VAL
47
B
HIS
48
n
48
HIS
48
B
PRO
49
n
49
PRO
49
B
SER
50
n
50
SER
50
B
GLY
51
n
51
GLY
51
B
VAL
52
n
52
VAL
52
B
ALA
53
n
53
ALA
53
B
LEU
54
n
54
LEU
54
B
GLN
55
n
55
GLN
55
B
ASP
56
n
56
ASP
56
B
ARG
57
n
57
ARG
57
B
VAL
58
n
58
VAL
58
B
PRO
59
n
59
PRO
59
B
LEU
60
n
60
LEU
60
B
ALA
61
n
61
ALA
61
B
SER
62
n
62
SER
62
B
GLN
63
n
63
GLN
63
B
GLY
64
n
64
GLY
64
B
LEU
65
n
65
LEU
65
B
GLY
66
n
66
GLY
66
B
PRO
67
n
67
PRO
67
B
GLY
68
n
68
GLY
68
B
SER
69
n
69
SER
69
B
THR
70
n
70
THR
70
B
VAL
71
n
71
VAL
71
B
LEU
72
n
72
LEU
72
B
LEU
73
n
73
LEU
73
B
VAL
74
n
74
VAL
74
B
VAL
75
n
75
VAL
75
B
ASP
76
n
76
ASP
76
B
LYS
77
n
77
LYS
77
B
SER
78
n
78
SER
78
B
ASP
79
n
79
ASP
79
B
GLU
80
n
80
GLU
80
B
PRO
81
n
81
PRO
81
B
LEU
82
n
82
LEU
82
B
ASN
83
n
83
ASN
83
B
ILE
84
n
84
ILE
84
B
LEU
85
n
85
LEU
85
B
VAL
86
n
86
VAL
86
B
ARG
87
n
87
ARG
87
B
ASN
88
n
88
ASN
88
B
ASN
89
n
89
ASN
89
B
LYS
90
n
90
LYS
90
B
GLY
91
n
91
GLY
91
B
ARG
92
n
92
ARG
92
B
SER
93
n
93
SER
93
B
SER
94
n
94
SER
94
B
THR
95
n
95
THR
95
B
TYR
96
n
96
TYR
96
B
GLU
97
n
97
GLU
97
B
VAL
98
n
98
VAL
98
B
ARG
99
n
99
ARG
99
B
LEU
100
n
100
LEU
100
B
THR
101
n
101
THR
101
B
GLN
102
n
102
GLN
102
B
THR
103
n
103
THR
103
B
VAL
104
n
104
VAL
104
B
ALA
105
n
105
ALA
105
B
HIS
106
n
106
HIS
106
B
LEU
107
n
107
LEU
107
B
LYS
108
n
108
LYS
108
B
GLN
109
n
109
GLN
109
B
GLN
110
n
110
GLN
110
B
VAL
111
n
111
VAL
111
B
SER
112
n
112
SER
112
B
GLY
113
n
113
GLY
113
B
LEU
114
n
114
LEU
114
B
GLU
115
n
115
GLU
115
B
GLY
116
n
116
GLY
116
B
VAL
117
n
117
VAL
117
B
GLN
118
n
118
GLN
118
B
ASP
119
n
119
ASP
119
B
ASP
120
n
120
ASP
120
B
LEU
121
n
121
LEU
121
B
PHE
122
n
122
PHE
122
B
TRP
123
n
123
TRP
123
B
LEU
124
n
124
LEU
124
B
THR
125
n
125
THR
125
B
PHE
126
n
126
PHE
126
B
GLU
127
n
127
GLU
127
B
GLY
128
n
128
GLY
128
B
LYS
129
n
129
LYS
129
B
PRO
130
n
130
PRO
130
B
LEU
131
n
131
LEU
131
B
GLU
132
n
132
GLU
132
B
ASP
133
n
133
ASP
133
B
GLN
134
n
134
GLN
134
B
LEU
135
n
135
LEU
135
B
PRO
136
n
136
PRO
136
B
LEU
137
n
137
LEU
137
B
GLY
138
n
138
GLY
138
B
GLU
139
n
139
GLU
139
B
TYR
140
n
140
TYR
140
B
GLY
141
n
141
GLY
141
B
LEU
142
n
142
LEU
142
B
LYS
143
n
143
LYS
143
B
PRO
144
n
144
PRO
144
B
LEU
145
n
145
LEU
145
B
SER
146
n
146
SER
146
B
THR
147
n
147
THR
147
B
VAL
148
n
148
VAL
148
B
PHE
149
n
149
PHE
149
B
MET
150
n
150
MET
150
B
ASN
151
n
151
ASN
151
B
LEU
152
n
152
LEU
152
B
ARG
153
n
153
ARG
153
B
LEU
154
n
154
LEU
154
B
ARG
155
n
155
ARG
155
B
GLY
156
n
156
GLY
156
B
2.7400
-0.1588
0.8526
2.2424
0.4785
2.3308
0.0072
-0.0455
-0.2492
0.2343
0.1357
-0.1014
0.0786
0.0977
-0.1485
0.0534
0.0177
-0.0248
0.0136
-0.0153
0.1215
refined
7.6836
-17.3964
40.9201
X-RAY DIFFRACTION
0.1305
0.1797
-0.7438
1.2736
-0.2552
9.2209
0.8590
-0.1250
-0.1207
-0.4849
-0.4254
0.5138
0.4184
2.5348
-0.4213
0.9645
-0.3062
-0.0200
1.0031
-0.1402
0.4229
refined
-20.5406
-22.2454
-2.8176
X-RAY DIFFRACTION
0.5005
-0.1080
0.2264
0.4932
-0.0946
0.1809
-0.0183
0.4365
-0.2187
0.2198
-0.2105
-0.0226
0.1234
0.3183
0.1581
0.5997
-0.1364
-0.1059
0.6977
-0.1047
0.2607
refined
-22.2083
-17.3533
5.6786
X-RAY DIFFRACTION
1.4910
0.7251
-0.1203
1.6688
-0.2862
0.8207
-0.2262
0.2687
0.1078
-0.3097
0.2140
0.1567
-0.0426
0.1031
0.0057
0.1335
-0.0363
-0.0338
0.1286
0.0001
0.1362
refined
-1.5852
-5.6679
21.4522
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
(chain A and resid -1:162)
X-RAY DIFFRACTION
2
(chain B and resid 4:19)
X-RAY DIFFRACTION
3
(chain B and resid 23:78)
X-RAY DIFFRACTION
4
(chain B and resid 79:156)
author_and_software_defined_assembly
PISA
2
dimeric
2570
-10
15010
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
THR
10
A
O
THR
12
A
N
VAL
18
A
N
VAL
20
A
O
TYR
17
A
O
TYR
19
A
N
LYS
132
A
N
LYS
134
A
O
GLU
128
A
O
GLU
130
A
N
THR
120
A
N
THR
122
A
O
THR
115
A
O
THR
117
A
N
VAL
142
A
N
VAL
144
A
O
ASN
143
A
O
ASN
145
A
N
LEU
155
A
N
LEU
157
A
O
ALA
154
A
O
ALA
156
A
N
VAL
32
A
N
VAL
34
B
O
LEU
5
B
O
LEU
5
B
N
VAL
17
B
N
VAL
17
B
O
ARG
44
B
O
ARG
44
B
N
VAL
74
B
N
VAL
74
B
O
SER
94
B
O
SER
94
B
N
VAL
86
B
N
VAL
86
B
O
LEU
85
B
O
LEU
85
B
N
VAL
148
B
N
VAL
148
B
O
PHE
149
B
O
PHE
149
B
N
THR
125
B
N
THR
125
1
A
CG
ASP
2
A
CG
ASP
4
1
Y
1
A
OD1
ASP
2
A
OD1
ASP
4
1
Y
1
A
OD2
ASP
2
A
OD2
ASP
4
1
Y
1
A
CG
GLN
149
A
CG
GLN
151
1
Y
1
A
CD
GLN
149
A
CD
GLN
151
1
Y
1
A
OE1
GLN
149
A
OE1
GLN
151
1
Y
1
A
NE2
GLN
149
A
NE2
GLN
151
1
Y
1
B
CG
LYS
8
B
CG
LYS
8
1
Y
1
B
CD
LYS
8
B
CD
LYS
8
1
Y
1
B
CE
LYS
8
B
CE
LYS
8
1
Y
1
B
NZ
LYS
8
B
NZ
LYS
8
1
Y
1
B
CG
MET
9
B
CG
MET
9
1
Y
1
B
SD
MET
9
B
SD
MET
9
1
Y
1
B
CE
MET
9
B
CE
MET
9
1
Y
1
B
CG
GLN
16
B
CG
GLN
16
1
Y
1
B
CD
GLN
16
B
CD
GLN
16
1
Y
1
B
OE1
GLN
16
B
OE1
GLN
16
1
Y
1
B
NE2
GLN
16
B
NE2
GLN
16
1
Y
1
B
CG
MET
23
B
CG
MET
23
1
Y
1
B
SD
MET
23
B
SD
MET
23
1
Y
1
B
CE
MET
23
B
CE
MET
23
1
Y
1
B
CG
GLU
27
B
CG
GLU
27
1
Y
1
B
CD
GLU
27
B
CD
GLU
27
1
Y
1
B
OE1
GLU
27
B
OE1
GLU
27
1
Y
1
B
OE2
GLU
27
B
OE2
GLU
27
1
Y
1
B
CG
GLN
34
B
CG
GLN
34
1
Y
1
B
CD
GLN
34
B
CD
GLN
34
1
Y
1
B
OE1
GLN
34
B
OE1
GLN
34
1
Y
1
B
NE2
GLN
34
B
NE2
GLN
34
1
Y
1
B
CG
LYS
35
B
CG
LYS
35
1
Y
1
B
CD
LYS
35
B
CD
LYS
35
1
Y
1
B
CE
LYS
35
B
CE
LYS
35
1
Y
1
B
NZ
LYS
35
B
NZ
LYS
35
1
Y
1
B
CD
LYS
77
B
CD
LYS
77
1
Y
1
B
CE
LYS
77
B
CE
LYS
77
1
Y
1
B
NZ
LYS
77
B
NZ
LYS
77
1
Y
1
B
CG
ASP
79
B
CG
ASP
79
1
Y
1
B
OD1
ASP
79
B
OD1
ASP
79
1
Y
1
B
OD2
ASP
79
B
OD2
ASP
79
1
Y
1
B
CE
LYS
90
B
CE
LYS
90
1
Y
1
B
NZ
LYS
90
B
NZ
LYS
90
1
Y
1
A
THR
163
A
THR
165
1
Y
1
A
ASP
164
A
ASP
166
1
Y
1
A
THR
165
A
THR
167
1
Y
1
A
ARG
166
A
ARG
168
1
Y
1
A
GLU
167
A
GLU
169
1
Y
1
A
ALA
168
A
ALA
170
1
Y
1
A
LEU
169
A
LEU
171
1
Y
1
B
MET
1
B
MET
1
1
Y
1
B
GLY
2
B
GLY
2
1
Y
1
B
TRP
3
B
TRP
3
1
Y
1
B
SER
20
B
SER
20
1
Y
1
B
SER
21
B
SER
21
1
Y
1
B
SER
22
B
SER
22
1
Y
1
A
ASN
20
-118.84
66.20
1
A
SER
124
52.79
-134.81
1
A
GLN
149
70.01
-22.46
1
A
THR
150
-140.53
11.50
1
B
ASN
13
-148.50
-92.94
1
B
LYS
77
-47.64
-71.73
-5.9040
0.0000
-1.0195
1.3748
-0.0000
4.5292
0.2240
0.1635
0.1666
2.300
34.671
699
14495
13860
5.04
93.27
0.28
RANDOM
1
1.0
MOLECULAR REPLACEMENT
0.83
1.10
PDB ENTRIES 1Z2M AND 3PT2
ML
FLAT BULK SOLVENT MODEL
46.220
0.359
2.300
34.671
139
2582
10
0
2433
0.006
2501
0.944
3395
13.604
906
0.060
385
0.004
439
0.2740
0.1995
2.4775
133
2465
88.00
0.2641
0.1915
2.7268
141
2558
91.00
0.2401
0.1757
3.1211
136
2634
93.00
0.2048
0.1445
3.9314
140
2752
97.00
0.2050
0.1545
34.6746
149
2752
96.00
2.3
34.9
3PSE
14673
14495
1.0
2.5
0.107
0.129
1
7.4
3.1
97.8
0.566
2.30
2.42
2.3
0.680
3.1
98.0
data collection
MxDC
phasing
PHASER
refinement
PHENIX
(phenix.refine: 1.6.4_486)
data reduction
MOSFLM
data scaling
SCALA
Structure of a viral OTU domain protease bound to interferon-stimulated gene 15 (ISG15)
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
5
N
N
A
ASP
2
A
ASP
4
HELX_P
A
ARG
5
A
ARG
7
1
1
4
A
ILE
25
A
ILE
27
HELX_P
A
ASP
27
A
ASP
29
5
2
3
A
CYS
40
A
CYS
42
HELX_P
A
THR
49
A
THR
51
1
3
10
A
SER
57
A
SER
59
HELX_P
A
TYR
72
A
TYR
74
5
4
16
A
PRO
77
A
PRO
79
HELX_P
A
VAL
82
A
VAL
84
5
5
6
A
LEU
86
A
LEU
88
HELX_P
A
LEU
94
A
LEU
96
1
6
9
A
THR
102
A
THR
104
HELX_P
A
MET
112
A
MET
114
1
7
11
A
PRO
159
A
PRO
161
HELX_P
A
PHE
161
A
PHE
163
5
8
3
B
VAL
25
B
VAL
25
HELX_P
B
ILE
36
B
ILE
36
1
9
12
B
HIS
39
B
HIS
39
HELX_P
B
GLN
42
B
GLN
42
5
10
4
B
PRO
59
B
PRO
59
HELX_P
B
SER
62
B
SER
62
5
11
4
B
VAL
104
B
VAL
104
HELX_P
B
GLU
115
B
GLU
115
1
12
12
B
GLN
118
B
GLN
118
HELX_P
B
LEU
121
B
LEU
121
5
13
4
B
LEU
137
B
LEU
137
HELX_P
B
TYR
140
B
TYR
140
5
14
4
covale
1.804
none
A
CYS
40
A
SG
CYS
42
1_555
B
4LJ
157
C
C1
4LJ
1_555
covale
1.397
one
B
GLY
156
B
C
GLY
156
1_555
B
4LJ
157
C
N1
4LJ
1_555
HYDROLASE/PROTEIN BINDING
viral deubiquitinase, 3-aminopropane, intein-mediated ligation, Crimean-Congo Hemorrhagic Fever virus, HYDROLASE-PROTEIN BINDING complex
B
HIS
48
B
HIS
48
1
B
PRO
49
B
PRO
49
5.31
Q6TQF5_9VIRU
UNP
1
1
Q6TQF5
MDFLRSLDWTQVIAGQYVSNPRFNISDYFEIVRQPGDGNCFYHSIAELTMPNKTDHSYHYIKRLTESAARKYYQEEPEAR
LVGLSLEDYLKRMLSDNEWGSTLEASMLAKEMGITIIIWTVAASDEVEAGIKFGDGDVFTAVNLLHSGQTHFDALRILPQ
FETDTREAL
ISG15_HUMAN
UNP
2
1
P05161
MGWDLTVKMLAGNEFQVSLSSSMSVSELKAQITQKIGVHAFQQRLAVHPSGVALQDRVPLASQGLGPGSTVLLVVDKCDE
PLSILVRNNKGRSSTYEVRLTQTVAHLKQQVSGLEGVQDDLFWLTFEGKPLEDQLPLGEYGLKPLSTVFMNLRLRG
1
169
3PSE
1
169
Q6TQF5
A
1
3
171
1
156
3PSE
1
156
P05161
B
2
1
156
1
expression tag
GLY
-1
3PSE
A
Q6TQF5
UNP
1
1
expression tag
PRO
0
3PSE
A
Q6TQF5
UNP
2
2
CYS
engineered mutation
SER
78
3PSE
B
P05161
UNP
78
78
2
SER
SEE REMARK 999
ASN
83
3PSE
B
P05161
UNP
83
83
7
2
2
4
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
A
THR
10
A
THR
12
A
ILE
13
A
ILE
15
A
GLN
16
A
GLN
18
A
SER
19
A
SER
21
A
VAL
127
A
VAL
129
A
PHE
133
A
PHE
135
A
THR
115
A
THR
117
A
VAL
121
A
VAL
123
A
ALA
141
A
ALA
143
A
SER
147
A
SER
149
A
HIS
151
A
HIS
153
A
ILE
157
A
ILE
159
A
PHE
29
A
PHE
31
A
VAL
32
A
VAL
34
B
ASP
4
B
ASP
4
B
MET
9
B
MET
9
B
GLU
14
B
GLU
14
B
SER
18
B
SER
18
B
GLN
43
B
GLN
43
B
VAL
47
B
VAL
47
B
THR
70
B
THR
70
B
VAL
75
B
VAL
75
B
SER
93
B
SER
93
B
VAL
98
B
VAL
98
B
LEU
82
B
LEU
82
B
ARG
87
B
ARG
87
B
THR
147
B
THR
147
B
LEU
152
B
LEU
152
B
PHE
122
B
PHE
122
B
THR
125
B
THR
125
BINDING SITE FOR RESIDUE 4LJ B 157
B
4LJ
157
Software
6
BINDING SITE FOR RESIDUE GOL B 1344
B
GOL
1344
Software
7
A
ASP
37
A
ASP
39
6
1_555
A
CYS
40
A
CYS
42
6
1_555
A
TRP
99
A
TRP
101
6
1_555
A
THR
150
A
THR
152
6
1_555
A
HIS
151
A
HIS
153
6
1_555
B
GLY
156
B
GLY
156
6
1_555
A
ASN
20
A
ASN
22
7
1_555
B
ARG
87
B
ARG
87
7
1_555
B
ASN
88
B
ASN
88
7
1_555
B
ASN
89
B
ASN
89
7
1_555
B
GLY
91
B
GLY
91
7
1_555
B
MET
150
B
MET
150
7
1_555
B
HOH
184
F
HOH
7
1_555
4
P 1 21 1