0.016788 0.000000 0.000000 0.000000 0.016788 0.000000 0.000000 0.000000 0.003434 0.000000 0.000000 0.000000 Dolan, K.T. Duguid, E.M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 16 90.000 90.000 90.000 59.566 59.566 291.177 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N O N 89 N P N 90 N O N 91 N O N 92 N O N 93 N C N 94 R C N 95 N O N 96 S C N 97 N O N 98 N C N 99 R C Y 100 N N Y 101 N C Y 102 N N Y 103 N C Y 104 N C N 105 N N Y 106 N N Y 107 N C Y 108 N N Y 109 N C N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N O N 125 N P N 126 N O N 127 N O N 128 N O N 129 N C N 130 R C N 131 N O N 132 S C N 133 N O N 134 N C N 135 R C N 136 N N N 137 N C N 138 N O N 139 N N N 140 N C N 141 N N N 142 N C N 143 N C N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N P N 160 N O N 161 N O N 162 N O N 163 N C N 164 R C N 165 N O N 166 S C N 167 N O N 168 N C N 169 R C Y 170 N N Y 171 N C Y 172 N N Y 173 N C N 174 N C N 175 N O N 176 N N N 177 N C N 178 N N N 179 N N Y 180 N C N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N O N 196 N P N 197 N O N 198 N O N 199 N O N 200 N C N 201 R C N 202 N O N 203 S C N 204 N O N 205 N C N 206 R C N 207 N N N 208 N C N 209 N O N 210 N N N 211 N C N 212 N O N 213 N C N 214 N C N 215 N C N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N N N 232 S C N 233 N C N 234 N O N 235 N C N 236 N C N 237 N C N 238 N O N 239 N N N 240 N O N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C N 256 N C N 257 N C N 258 N O N 259 N O N 260 N O N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N N N 271 N C N 272 N C N 273 N O N 274 N O N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N N N 281 S C N 282 N C N 283 N O N 284 N C Y 285 N C Y 286 N N Y 287 N C Y 288 N C Y 289 N N N 290 N O N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N N N 302 S C N 303 N C N 304 N O N 305 S C N 306 N C N 307 N C N 308 N C N 309 N O N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N N N 324 S C N 325 N C N 326 N O N 327 N C N 328 N C N 329 N C N 330 N C N 331 N O N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N N N 346 S C N 347 N C N 348 N O N 349 N C N 350 N C N 351 N C N 352 N C N 353 N N N 354 N O N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N N N 371 S C N 372 N C N 373 N O N 374 N C N 375 N C N 376 N S N 377 N C N 378 N O N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N N N 391 S C N 392 N C N 393 N O N 394 N C N 395 N C N 396 N C N 397 N O N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N N N 408 S C N 409 N C N 410 N O N 411 N C N 412 N O N 413 N O N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N N N 422 S C N 423 N C N 424 N O N 425 R C N 426 N O N 427 N C N 428 N O N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N N N 439 S C N 440 N C N 441 N O N 442 N C Y 443 N C Y 444 N C Y 445 N C Y 446 N N Y 447 N C Y 448 N C Y 449 N C Y 450 N C Y 451 N C N 452 N O N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N N N 466 S C N 467 N C N 468 N O N 469 N C N 470 N C N 471 N C N 472 N O N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N H N 481 N H N 482 N H N 483 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N sing Y 111 N sing Y 112 N doub N 113 N sing Y 114 N doub N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N sing Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N doub N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N doub N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N sing N 287 N sing N 288 N sing Y 289 N sing Y 290 N doub Y 291 N doub N 292 N sing Y 293 N sing N 294 N sing Y 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N doub N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N doub N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N doub N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N doub N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N doub N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N doub N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N doub N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N doub N 437 N sing N 438 N sing N 439 N sing N 440 N sing Y 441 N doub Y 442 N sing Y 443 N sing N 444 N sing Y 445 N doub Y 446 N sing Y 447 N sing N 448 N sing Y 449 N sing Y 450 N doub N 451 N sing Y 452 N doub N 453 N sing Y 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N doub N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing US J.Biol.Chem. JBCHA3 0071 0021-9258 286 22178 22185 10.1074/jbc.M111.245258 21550983 Crystal Structures of SlyA Protein, a Master Virulence Regulator of Salmonella, in Free and DNA-bound States. 2011 10.2210/pdb3q5f/pdb pdb_00003q5f 1 CCD 2010-03-18 MARMOSAIC 300 mm CCD MAD M x-ray 1 1.20610 1.0 1.25494 1.0 1.25525 1.0 35.32 123915 0.111 2.02 4.000 50.000 8323 98.80 14.90 23-ID-B APS 1.20610, 1.25494, 1.25525 SYNCHROTRON APS BEAMLINE 23-ID-B 16761.391 Transcriptional regulator slyA 2 man polymer 7055.625 DNA (5'-D(*AP*AP*TP*AP*AP*CP*TP*TP*AP*GP*CP*AP*AP*GP*CP*TP*AP*AP*TP*TP*AP*TP*A)-3') 1 syn polymer 7059.592 DNA (5'-D(*TP*TP*AP*TP*AP*AP*TP*TP*AP*GP*CP*TP*TP*GP*CP*TP*AP*AP*GP*TP*TP*AP*T)-3') 1 syn polymer Cytolysin slyA, Salmolysin no no SNAMESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEDKGLIS RQTCASDRRAKRIKLTEKAEPLIAEMEEVIHKTRGEILAGISSEEIELLIKLIAKLEHNIMELHSHD SNAMESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEDKGLIS RQTCASDRRAKRIKLTEKAEPLIAEMEEVIHKTRGEILAGISSEEIELLIKLIAKLEHNIMELHSHD A,B polypeptide(L) no no (DA)(DA)(DT)(DA)(DA)(DC)(DT)(DT)(DA)(DG)(DC)(DA)(DA)(DG)(DC)(DT)(DA)(DA)(DT)(DT) (DA)(DT)(DA) AATAACTTAGCAAGCTAATTATA C polydeoxyribonucleotide no no (DT)(DT)(DA)(DT)(DA)(DA)(DT)(DT)(DA)(DG)(DC)(DT)(DT)(DG)(DC)(DT)(DA)(DA)(DG)(DT) (DT)(DA)(DT) TTATAATTAGCTTGCTAAGTTAT D polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n enterica serovar Typhimurium sample slyA, STM1444 90371 Salmonella enterica 562 Escherichia coli BL21(DE3) plasmid pMCSG19 1 2.71 54.63 VAPOR DIFFUSION, HANGING DROP 6.74 20% PEG 4000, 0.1M sodium chloride, 0.05M magnesium chloride, 0.1M cacodylate, 2% benzamidine hydrochloride, pH 6.74, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 PEG 4000 1 sodium chloride 1 magnesium chloride 1 cacodylate 1 benzamidine hydrochloride 1 PEG 4000 2 sodium chloride 2 magnesium chloride 2 cacodylate 2 benzamidine hydrochloride 2 0.013 1 20 C 2 D 23 12.409 C_DA2:DT23_D 1 -11.055 1.153 -0.001 -0.308 5.614 1 20 C 3 D 22 -8.200 C_DT3:DA22_D 2 -4.881 -1.023 0.173 -0.248 4.688 1 20 C 4 D 21 4.676 C_DA4:DT21_D 3 -9.316 0.907 0.023 -0.299 5.599 1 20 C 5 D 20 8.694 C_DA5:DT20_D 4 -6.059 -0.217 0.118 -0.343 9.847 1 19 C 6 D 19 5.320 C_DC6:DG19_D 5 -12.357 -0.266 0.056 -0.140 -3.396 1 20 C 7 D 18 -1.256 C_DT7:DA18_D 6 -16.090 -0.181 0.216 -0.217 -2.399 1 20 C 8 D 17 1.960 C_DT8:DA17_D 7 -11.067 0.254 -0.002 -0.239 1.925 1 20 C 9 D 16 -4.057 C_DA9:DT16_D 8 -1.084 0.499 -0.096 -0.328 6.899 1 19 C 10 D 15 1.660 C_DG10:DC15_D 9 -12.734 -0.508 -0.217 -0.366 1.206 1 19 C 11 D 14 -3.659 C_DC11:DG14_D 10 -17.076 0.448 0.107 -0.405 -16.208 1 20 C 12 D 13 2.369 C_DA12:DT13_D 11 -3.876 0.671 -0.323 -0.208 0.078 1 20 C 13 D 12 -0.652 C_DA13:DT12_D 12 -1.482 0.655 0.048 -0.304 -0.379 1 19 C 14 D 11 4.637 C_DG14:DC11_D 13 -16.309 -0.110 0.348 -0.205 -6.588 1 19 C 15 D 10 -1.219 C_DC15:DG10_D 14 -7.391 0.902 0.038 -0.434 1.461 1 20 C 16 D 9 -6.562 C_DT16:DA9_D 15 -3.512 0.007 0.206 -0.084 3.280 1 20 C 17 D 8 -2.155 C_DA17:DT8_D 16 -8.969 -0.084 0.175 -0.281 6.010 1 20 C 18 D 7 2.065 C_DA18:DT7_D 17 -8.222 0.170 0.573 -0.390 -6.010 1 20 C 19 D 6 -0.148 C_DT19:DA6_D 18 -7.086 0.451 0.252 -0.402 -2.964 1 20 C 20 D 5 8.148 C_DT20:DA5_D 19 -6.354 -0.372 -0.009 -0.099 -6.072 1 20 C 21 D 4 5.811 C_DA21:DT4_D 20 -4.969 0.018 0.058 -0.252 -0.935 1 20 C 22 D 3 -2.674 C_DT22:DA3_D 21 -5.914 -0.174 0.141 -0.269 2.324 1 20 C 23 D 2 4.457 C_DA23:DT2_D 22 -6.513 -0.269 -0.212 -0.379 3.264 25.219 C C 2 3 -7.180 D D 23 22 3.103 -3.111 -0.499 -1.194 CC_DA2DT3:DA22DT23_DD 1 -4.482 10.345 24.632 -1.839 -0.147 3.351 43.568 C C 3 4 4.875 D D 22 21 3.356 3.614 0.595 -0.173 CC_DT3DA4:DT21DA22_DD 2 1.664 -2.244 43.395 -0.590 -0.637 3.187 31.673 C C 4 5 13.267 D D 21 20 3.227 7.180 -0.361 0.149 CC_DA4DA5:DT20DT21_DD 3 -0.742 1.370 30.860 -1.043 0.525 3.215 31.392 C C 5 6 1.829 D D 20 19 3.218 0.989 0.292 -0.330 CC_DA5DC6:DG19DT20_DD 4 1.151 -2.128 31.357 -0.792 -0.327 3.342 38.557 C C 6 7 8.846 D D 19 18 3.494 5.820 0.070 -0.786 CC_DC6DT7:DA18DG19_DD 5 -0.306 0.464 38.131 -1.946 -0.145 3.266 36.780 C C 7 8 -4.934 D D 18 17 3.251 -3.109 0.008 -0.350 CC_DT7DT8:DA17DA18_DD 6 1.658 -2.631 36.616 -0.132 0.212 3.169 35.892 C C 8 9 6.631 D D 17 16 3.203 4.077 -0.101 -0.076 CC_DT8DA9:DT16DA17_DD 7 1.431 -2.328 35.640 -0.694 0.364 2.998 26.562 C C 9 10 20.173 D D 16 15 3.334 9.088 0.833 -0.409 CC_DA9DG10:DC15DT16_DD 8 -0.102 0.227 24.985 -3.280 -1.839 3.281 43.218 C C 10 11 5.728 D D 15 14 3.324 4.202 -0.702 -0.963 CC_DG10DC11:DG14DC15_DD 9 -5.646 7.697 42.668 -1.726 0.392 3.613 42.540 C C 11 12 6.929 D D 14 13 3.671 4.998 0.124 -0.117 CC_DC11DA12:DT13DG14_DD 10 6.539 -9.065 41.772 -0.730 0.573 3.098 25.933 C C 12 13 23.096 D D 13 12 3.048 10.051 -0.292 0.729 CC_DA12DA13:DT12DT13_DD 11 -4.301 9.882 23.552 -1.117 -0.523 3.262 32.873 C C 13 14 -1.225 D D 12 11 3.252 -0.691 -0.252 -0.425 CC_DA13DG14:DC11DT12_DD 12 -4.920 8.726 32.506 -0.633 -0.398 3.353 42.658 C C 14 15 4.911 D D 11 10 3.418 3.565 0.292 -0.826 CC_DG14DC15:DG10DC11_DD 13 3.516 -4.844 42.377 -1.508 -0.034 2.895 27.173 C C 15 16 16.964 D D 10 9 3.212 7.860 -0.864 -0.682 CC_DC15DT16:DA9DG10_DD 14 -0.315 0.680 26.030 -3.338 1.764 3.132 34.449 C C 16 17 5.140 D D 9 8 3.181 3.040 0.073 -0.436 CC_DT16DA17:DT8DA9_DD 15 0.539 -0.912 34.315 -1.193 -0.042 3.144 36.874 C C 17 18 -3.086 D D 8 7 3.179 -1.949 0.489 -0.507 CC_DA17DA18:DT7DT8_DD 16 -3.432 5.435 36.669 -0.546 -1.224 3.547 36.924 C C 18 19 0.253 D D 7 6 3.580 0.160 -0.720 -1.173 CC_DA18DT19:DA6DT7_DD 17 1.344 -2.123 36.900 -1.875 1.334 3.001 26.742 C C 19 20 10.713 D D 6 5 3.170 4.924 0.095 -0.639 CC_DT19DT20:DA5DA6_DD 18 1.922 -4.182 26.224 -2.599 0.270 3.398 42.789 C C 20 21 10.297 D D 5 4 3.369 7.472 0.319 0.623 CC_DT20DA21:DT4DA5_DD 19 -2.874 3.961 42.068 0.074 -0.736 3.266 35.002 C C 21 22 -3.358 D D 4 3 3.220 -2.018 -0.312 -0.713 CC_DA21DT22:DA3DT4_DD 20 -1.589 2.644 34.911 -0.885 0.282 3.244 35.403 C C 22 23 -5.302 D D 3 2 3.259 -3.218 -0.132 -0.130 CC_DT22DA23:DT2DA3_DD 21 2.200 -3.625 35.194 0.259 0.539 software chem_comp_atom chem_comp_bond database_2 struct_ncs_dom_lim struct_ref_seq_dif repository Initial release Version format compliance Refinement description Data collection Database references Refinement description 1 0 2011-05-04 1 1 2011-07-13 1 2 2017-11-08 1 3 2024-02-21 _software.classification _software.contact_author _software.contact_author_email _software.date _software.language _software.location _software.name _software.type _software.version _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ref_seq_dif.details RCSB Y RCSB 2010-12-28 REL REL 0.053 3.232 96.70 14.70 0.070 2.558 99.00 15.50 0.127 2.071 99.30 15.60 0.152 1.925 99.40 15.40 0.178 1.779 99.10 15.50 0.195 1.759 99.00 15.30 0.215 1.717 99.00 15.00 0.231 1.745 98.90 14.30 0.241 1.636 99.20 13.70 0.287 1.653 99.00 13.80 AUTHORS STATE THAT THE SEQUENCING EXPERIMENTS OF THE CLONES CONFIRMED THE CODING SEQUENCE AT THESE POSITIONS IS GAGCCG (CORRESPONDING TO GLU-PRO). 31.972 7.248 8.980 TA 60.00 0.93 3.330 29.043 20.066 TA 60.00 0.52 0.248 38.777 27.480 TA 60.00 0.50 0.700 139 0.670 229 0.680 289 0.730 318 0.680 360 0.690 383 0.610 391 0.520 425 0.820 0.830 0.780 2522 1661 861 0.920 0.970 0.900 126 35 91 0.920 0.930 0.900 378 200 178 0.880 0.910 0.840 442 281 161 0.830 0.860 0.770 431 294 137 0.780 0.810 0.680 710 522 188 0.680 0.710 0.600 435 329 106 n 1 -2 A n 2 -1 A n 3 0 A n 4 1 A GLU 2 n 5 GLU 2 A SER 3 n 6 SER 3 A PRO 4 n 7 PRO 4 A LEU 5 n 8 LEU 5 A GLY 6 n 9 GLY 6 A SER 7 n 10 SER 7 A ASP 8 n 11 ASP 8 A LEU 9 n 12 LEU 9 A ALA 10 n 13 ALA 10 A ARG 11 n 14 ARG 11 A LEU 12 n 15 LEU 12 A VAL 13 n 16 VAL 13 A ARG 14 n 17 ARG 14 A ILE 15 n 18 ILE 15 A TRP 16 n 19 TRP 16 A ARG 17 n 20 ARG 17 A ALA 18 n 21 ALA 18 A LEU 19 n 22 LEU 19 A ILE 20 n 23 ILE 20 A ASP 21 n 24 ASP 21 A HIS 22 n 25 HIS 22 A ARG 23 n 26 ARG 23 A LEU 24 n 27 LEU 24 A LYS 25 n 28 LYS 25 A PRO 26 n 29 PRO 26 A LEU 27 n 30 LEU 27 A GLU 28 n 31 GLU 28 A LEU 29 n 32 LEU 29 A THR 30 n 33 THR 30 A GLN 31 n 34 GLN 31 A THR 32 n 35 THR 32 A HIS 33 n 36 HIS 33 A TRP 34 n 37 TRP 34 A VAL 35 n 38 VAL 35 A THR 36 n 39 THR 36 A LEU 37 n 40 LEU 37 A HIS 38 n 41 HIS 38 A ASN 39 n 42 ASN 39 A ILE 40 n 43 ILE 40 A HIS 41 n 44 HIS 41 A GLN 42 n 45 GLN 42 A LEU 43 n 46 LEU 43 A PRO 44 n 47 PRO 44 A PRO 45 n 48 PRO 45 A ASP 46 n 49 ASP 46 A GLN 47 n 50 GLN 47 A SER 48 n 51 SER 48 A GLN 49 n 52 GLN 49 A ILE 50 n 53 ILE 50 A GLN 51 n 54 GLN 51 A LEU 52 n 55 LEU 52 A ALA 53 n 56 ALA 53 A LYS 54 n 57 LYS 54 A ALA 55 n 58 ALA 55 A ILE 56 n 59 ILE 56 A GLY 57 n 60 GLY 57 A ILE 58 n 61 ILE 58 A GLU 59 n 62 GLU 59 A GLN 60 n 63 GLN 60 A PRO 61 n 64 PRO 61 A SER 62 n 65 SER 62 A LEU 63 n 66 LEU 63 A VAL 64 n 67 VAL 64 A ARG 65 n 68 ARG 65 A THR 66 n 69 THR 66 A LEU 67 n 70 LEU 67 A ASP 68 n 71 ASP 68 A GLN 69 n 72 GLN 69 A LEU 70 n 73 LEU 70 A GLU 71 n 74 GLU 71 A ASP 72 n 75 ASP 72 A LYS 73 n 76 LYS 73 A GLY 74 n 77 GLY 74 A LEU 75 n 78 LEU 75 A ILE 76 n 79 ILE 76 A SER 77 n 80 SER 77 A ARG 78 n 81 ARG 78 A GLN 79 n 82 GLN 79 A THR 80 n 83 THR 80 A CYS 81 n 84 CYS 81 A ALA 82 n 85 ALA 82 A SER 83 n 86 SER 83 A ASP 84 n 87 ASP 84 A ARG 85 n 88 ARG 85 A ARG 86 n 89 ARG 86 A ALA 87 n 90 ALA 87 A LYS 88 n 91 LYS 88 A ARG 89 n 92 ARG 89 A ILE 90 n 93 ILE 90 A LYS 91 n 94 LYS 91 A LEU 92 n 95 LEU 92 A THR 93 n 96 THR 93 A GLU 94 n 97 GLU 94 A LYS 95 n 98 LYS 95 A ALA 96 n 99 ALA 96 A GLU 97 n 100 GLU 97 A PRO 98 n 101 PRO 98 A LEU 99 n 102 LEU 99 A ILE 100 n 103 ILE 100 A ALA 101 n 104 ALA 101 A GLU 102 n 105 GLU 102 A MET 103 n 106 MET 103 A GLU 104 n 107 GLU 104 A GLU 105 n 108 GLU 105 A VAL 106 n 109 VAL 106 A ILE 107 n 110 ILE 107 A HIS 108 n 111 HIS 108 A LYS 109 n 112 LYS 109 A THR 110 n 113 THR 110 A ARG 111 n 114 ARG 111 A GLY 112 n 115 GLY 112 A GLU 113 n 116 GLU 113 A ILE 114 n 117 ILE 114 A LEU 115 n 118 LEU 115 A ALA 116 n 119 ALA 116 A GLY 117 n 120 GLY 117 A ILE 118 n 121 ILE 118 A SER 119 n 122 SER 119 A SER 120 n 123 SER 120 A GLU 121 n 124 GLU 121 A GLU 122 n 125 GLU 122 A ILE 123 n 126 ILE 123 A GLU 124 n 127 GLU 124 A LEU 125 n 128 LEU 125 A LEU 126 n 129 LEU 126 A ILE 127 n 130 ILE 127 A LYS 128 n 131 LYS 128 A LEU 129 n 132 LEU 129 A ILE 130 n 133 ILE 130 A ALA 131 n 134 ALA 131 A LYS 132 n 135 LYS 132 A LEU 133 n 136 LEU 133 A GLU 134 n 137 GLU 134 A HIS 135 n 138 HIS 135 A ASN 136 n 139 ASN 136 A ILE 137 n 140 ILE 137 A MET 138 n 141 MET 138 A GLU 139 n 142 GLU 139 A LEU 140 n 143 LEU 140 A HIS 141 n 144 HIS 141 A SER 142 n 145 SER 142 A n 146 143 A n 147 144 A n 1 -2 B n 2 -1 B n 3 0 B n 4 1 B n 5 2 B SER 3 n 6 SER 3 B PRO 4 n 7 PRO 4 B LEU 5 n 8 LEU 5 B GLY 6 n 9 GLY 6 B SER 7 n 10 SER 7 B ASP 8 n 11 ASP 8 B LEU 9 n 12 LEU 9 B ALA 10 n 13 ALA 10 B ARG 11 n 14 ARG 11 B LEU 12 n 15 LEU 12 B VAL 13 n 16 VAL 13 B ARG 14 n 17 ARG 14 B ILE 15 n 18 ILE 15 B TRP 16 n 19 TRP 16 B ARG 17 n 20 ARG 17 B ALA 18 n 21 ALA 18 B LEU 19 n 22 LEU 19 B ILE 20 n 23 ILE 20 B ASP 21 n 24 ASP 21 B HIS 22 n 25 HIS 22 B ARG 23 n 26 ARG 23 B LEU 24 n 27 LEU 24 B LYS 25 n 28 LYS 25 B PRO 26 n 29 PRO 26 B LEU 27 n 30 LEU 27 B GLU 28 n 31 GLU 28 B LEU 29 n 32 LEU 29 B THR 30 n 33 THR 30 B GLN 31 n 34 GLN 31 B THR 32 n 35 THR 32 B HIS 33 n 36 HIS 33 B TRP 34 n 37 TRP 34 B VAL 35 n 38 VAL 35 B THR 36 n 39 THR 36 B LEU 37 n 40 LEU 37 B HIS 38 n 41 HIS 38 B ASN 39 n 42 ASN 39 B ILE 40 n 43 ILE 40 B HIS 41 n 44 HIS 41 B GLN 42 n 45 GLN 42 B LEU 43 n 46 LEU 43 B PRO 44 n 47 PRO 44 B PRO 45 n 48 PRO 45 B ASP 46 n 49 ASP 46 B GLN 47 n 50 GLN 47 B SER 48 n 51 SER 48 B GLN 49 n 52 GLN 49 B ILE 50 n 53 ILE 50 B GLN 51 n 54 GLN 51 B LEU 52 n 55 LEU 52 B ALA 53 n 56 ALA 53 B LYS 54 n 57 LYS 54 B ALA 55 n 58 ALA 55 B ILE 56 n 59 ILE 56 B GLY 57 n 60 GLY 57 B ILE 58 n 61 ILE 58 B GLU 59 n 62 GLU 59 B GLN 60 n 63 GLN 60 B PRO 61 n 64 PRO 61 B SER 62 n 65 SER 62 B LEU 63 n 66 LEU 63 B VAL 64 n 67 VAL 64 B ARG 65 n 68 ARG 65 B THR 66 n 69 THR 66 B LEU 67 n 70 LEU 67 B ASP 68 n 71 ASP 68 B GLN 69 n 72 GLN 69 B LEU 70 n 73 LEU 70 B GLU 71 n 74 GLU 71 B ASP 72 n 75 ASP 72 B LYS 73 n 76 LYS 73 B GLY 74 n 77 GLY 74 B LEU 75 n 78 LEU 75 B ILE 76 n 79 ILE 76 B SER 77 n 80 SER 77 B ARG 78 n 81 ARG 78 B GLN 79 n 82 GLN 79 B THR 80 n 83 THR 80 B CYS 81 n 84 CYS 81 B ALA 82 n 85 ALA 82 B SER 83 n 86 SER 83 B ASP 84 n 87 ASP 84 B ARG 85 n 88 ARG 85 B ARG 86 n 89 ARG 86 B ALA 87 n 90 ALA 87 B LYS 88 n 91 LYS 88 B ARG 89 n 92 ARG 89 B ILE 90 n 93 ILE 90 B LYS 91 n 94 LYS 91 B LEU 92 n 95 LEU 92 B THR 93 n 96 THR 93 B GLU 94 n 97 GLU 94 B LYS 95 n 98 LYS 95 B ALA 96 n 99 ALA 96 B GLU 97 n 100 GLU 97 B PRO 98 n 101 PRO 98 B LEU 99 n 102 LEU 99 B ILE 100 n 103 ILE 100 B ALA 101 n 104 ALA 101 B GLU 102 n 105 GLU 102 B MET 103 n 106 MET 103 B GLU 104 n 107 GLU 104 B GLU 105 n 108 GLU 105 B VAL 106 n 109 VAL 106 B ILE 107 n 110 ILE 107 B HIS 108 n 111 HIS 108 B LYS 109 n 112 LYS 109 B THR 110 n 113 THR 110 B ARG 111 n 114 ARG 111 B GLY 112 n 115 GLY 112 B GLU 113 n 116 GLU 113 B ILE 114 n 117 ILE 114 B LEU 115 n 118 LEU 115 B ALA 116 n 119 ALA 116 B GLY 117 n 120 GLY 117 B ILE 118 n 121 ILE 118 B SER 119 n 122 SER 119 B SER 120 n 123 SER 120 B GLU 121 n 124 GLU 121 B GLU 122 n 125 GLU 122 B ILE 123 n 126 ILE 123 B GLU 124 n 127 GLU 124 B LEU 125 n 128 LEU 125 B LEU 126 n 129 LEU 126 B ILE 127 n 130 ILE 127 B LYS 128 n 131 LYS 128 B LEU 129 n 132 LEU 129 B ILE 130 n 133 ILE 130 B ALA 131 n 134 ALA 131 B LYS 132 n 135 LYS 132 B LEU 133 n 136 LEU 133 B GLU 134 n 137 GLU 134 B HIS 135 n 138 HIS 135 B ASN 136 n 139 ASN 136 B ILE 137 n 140 ILE 137 B MET 138 n 141 MET 138 B GLU 139 n 142 GLU 139 B LEU 140 n 143 LEU 140 B HIS 141 n 144 HIS 141 B SER 142 n 145 SER 142 B n 146 143 B n 147 144 B DA 1 n 1 DA 1 C DA 2 n 2 DA 2 C DT 3 n 3 DT 3 C DA 4 n 4 DA 4 C DA 5 n 5 DA 5 C DC 6 n 6 DC 6 C DT 7 n 7 DT 7 C DT 8 n 8 DT 8 C DA 9 n 9 DA 9 C DG 10 n 10 DG 10 C DC 11 n 11 DC 11 C DA 12 n 12 DA 12 C DA 13 n 13 DA 13 C DG 14 n 14 DG 14 C DC 15 n 15 DC 15 C DT 16 n 16 DT 16 C DA 17 n 17 DA 17 C DA 18 n 18 DA 18 C DT 19 n 19 DT 19 C DT 20 n 20 DT 20 C DA 21 n 21 DA 21 C DT 22 n 22 DT 22 C DA 23 n 23 DA 23 C DT 1 n 1 DT 1 D DT 2 n 2 DT 2 D DA 3 n 3 DA 3 D DT 4 n 4 DT 4 D DA 5 n 5 DA 5 D DA 6 n 6 DA 6 D DT 7 n 7 DT 7 D DT 8 n 8 DT 8 D DA 9 n 9 DA 9 D DG 10 n 10 DG 10 D DC 11 n 11 DC 11 D DT 12 n 12 DT 12 D DT 13 n 13 DT 13 D DG 14 n 14 DG 14 D DC 15 n 15 DC 15 D DT 16 n 16 DT 16 D DA 17 n 17 DA 17 D DA 18 n 18 DA 18 D DG 19 n 19 DG 19 D DT 20 n 20 DT 20 D DT 21 n 21 DT 21 D DA 22 n 22 DA 22 D DT 23 n 23 DT 23 D author_and_software_defined_assembly PISA 4 tetrameric 10800 -79 19880 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N GLN 79 A N GLN 82 A O ARG 89 A O ARG 92 B N GLN 79 B N GLN 82 B O ARG 89 B O ARG 92 1 A SER -2 A SER 1 1 Y 1 A ASN -1 A ASN 2 1 Y 1 A ALA 0 A ALA 3 1 Y 1 A MET 1 A MET 4 1 Y 1 A HIS 143 A HIS 146 1 Y 1 A ASP 144 A ASP 147 1 Y 1 B SER -2 B SER 1 1 Y 1 B ASN -1 B ASN 2 1 Y 1 B ALA 0 B ALA 3 1 Y 1 B MET 1 B MET 4 1 Y 1 B GLU 2 B GLU 5 1 Y 1 B HIS 143 B HIS 146 1 Y 1 B ASP 144 B ASP 147 1 Y 1 A C NH1 O4' ARG DA 86 23 2.08 1 2.36 0.30 108.30 110.66 C C C O4' C1' N9 DA DA DA 4 4 4 N 1 -2.57 0.40 104.50 101.93 C C C O4' C4' C3' DC DC DC 6 6 6 N 1 -6.90 0.80 102.40 95.50 C C C C3' C2' C1' DG DG DG 10 10 10 N 1 8.05 0.30 108.30 116.35 C C C O4' C1' N9 DG DG DG 10 10 10 N 1 4.25 0.30 108.30 112.55 C C C O4' C1' N1 DC DC DC 11 11 11 N 1 -5.85 0.70 108.00 102.15 C C C O4' C1' N9 DA DA DA 12 12 12 N 1 -5.60 0.80 102.40 96.80 C C C C3' C2' C1' DA DA DA 13 13 13 N 1 -4.86 0.80 105.90 101.04 C C C O4' C1' C2' DA DA DA 13 13 13 N 1 -4.60 0.70 102.20 97.60 C C C C4' C3' C2' DG DG DG 14 14 14 N 1 2.28 0.30 108.30 110.58 C C C O4' C1' N1 DT DT DT 16 16 16 N 1 2.99 0.30 108.30 111.29 C C C O4' C1' N1 DT DT DT 20 20 20 N 1 -4.84 0.60 122.30 117.46 C C C N3 C2 O2 DT DT DT 22 22 22 N 1 -3.94 0.40 104.50 100.56 C C C O4' C4' C3' DA DA DA 23 23 23 N 1 2.33 0.30 108.30 110.63 D D D O4' C1' N1 DT DT DT 4 4 4 N 1 -5.89 0.40 104.50 98.61 D D D O4' C4' C3' DT DT DT 7 7 7 N 1 -7.89 1.00 110.10 102.21 D D D C1' O4' C4' DT DT DT 7 7 7 N 1 -4.38 0.70 108.00 103.62 D D D O4' C1' N1 DT DT DT 7 7 7 N 1 3.72 0.60 119.90 123.62 D D D N3 C4 O4 DT DT DT 7 7 7 N 1 -4.43 0.70 124.90 120.47 D D D C5 C4 O4 DT DT DT 7 7 7 N 1 3.77 0.60 119.90 123.67 D D D N3 C4 O4 DT DT DT 8 8 8 N 1 -4.91 0.80 102.40 97.49 D D D C3' C2' C1' DA DA DA 9 9 9 N 1 3.17 0.30 108.30 111.47 D D D O4' C1' N9 DA DA DA 9 9 9 N 1 4.50 0.30 108.30 112.80 D D D O4' C1' N9 DG DG DG 10 10 10 N 1 -4.68 0.70 102.20 97.52 D D D C4' C3' C2' DG DG DG 14 14 14 N 1 -4.80 0.70 108.00 103.20 D D D O4' C1' N9 DG DG DG 14 14 14 N 1 -5.56 0.70 102.20 96.64 D D D C4' C3' C2' DT DT DT 16 16 16 N 1 -5.74 0.80 102.40 96.66 D D D C3' C2' C1' DT DT DT 16 16 16 N 1 -5.19 0.70 102.20 97.01 D D D C4' C3' C2' DA DA DA 17 17 17 N 1 -6.12 0.80 102.40 96.28 D D D C3' C2' C1' DA DA DA 17 17 17 N 1 -6.21 0.80 102.40 96.19 D D D C3' C2' C1' DA DA DA 18 18 18 N 1 3.64 0.30 108.30 111.94 D D D O4' C1' N9 DA DA DA 18 18 18 N 1 2.04 0.30 108.30 110.34 D D D O4' C1' N9 DG DG DG 19 19 19 N 1 3.58 0.30 108.30 111.88 D D D O4' C1' N1 DT DT DT 20 20 20 N 1 -5.60 0.80 102.40 96.80 D D D C3' C2' C1' DA DA DA 22 22 22 N 1 A HIS 41 -69.18 20.63 1 A PRO 45 -49.88 163.90 1 A ASP 46 61.21 64.84 1 A ARG 85 -54.05 1.79 1 A LEU 115 -87.26 36.92 1 A SER 120 -45.06 -17.74 1 A LEU 140 -57.96 -9.95 1 B HIS 41 -69.36 19.80 1 B ARG 85 -54.94 1.76 1 B LYS 95 -59.68 -6.27 1 B LEU 115 -85.35 37.08 1 B SER 120 -44.52 -17.51 5.00 1000.00 0.650 2534 18.32 -17.20 12.43 -23.08 7.70 -11.69 149.780 67.2251 29.710 13.9864 0.0000 -0.0000 13.9864 -0.0000 -27.9729 0.2662 0.2135 0.2189 2.96 46.0990 1060 10606 9.9900 89.4400 1.000 1.000 0.3800 1 0.120 MAD 0.9000 1.1100 MLHL FLAT BULK SOLVENT MODEL 36.1480 0.3040 2.96 46.0990 0 3186 0 937 2249 0.008 3331 1.354 4697 0.064 551 0.004 436 22.281 1348 1 A 1 1120 X-RAY DIFFRACTION POSITIONAL 0.040 2 B 1 1120 X-RAY DIFFRACTION POSITIONAL 0.040 0.4910 0.3144 3.0896 75 677 752 8 53.0000 0.3512 0.2638 3.2525 116 1014 1130 8 78.0000 0.2895 0.2159 3.4562 128 1194 1322 8 92.0000 0.2986 0.2276 3.7229 144 1257 1401 8 95.0000 0.2688 0.2094 4.0974 139 1268 1407 8 98.0000 0.2320 0.1850 4.6898 149 1322 1471 8 98.0000 0.2571 0.1948 5.9067 149 1340 1489 8 99.0000 0.2216 0.1971 46.1049 160 1474 1634 8 99.0000 2.96 50.000 3Q5F 11205 0.081 1.483 1 10.400 12.500 94.400 0.260 2.96 3.080 705 1.169 1 7.700 63.200 0.147 3.080 3.200 958 1.350 1 8.600 83.100 0.147 3.200 3.340 1127 1.299 1 10.500 96.900 0.137 3.340 3.520 1156 1.460 1 13.200 99.500 0.146 3.520 3.740 1147 1.367 1 14.100 99.600 0.112 3.740 4.030 1169 1.424 1 14.200 99.700 0.091 4.030 4.440 1166 1.774 1 14.100 99.800 0.071 4.440 5.080 1198 1.417 1 13.800 100.000 0.068 5.080 6.390 1227 1.553 1 13.500 100.000 0.036 6.390 50.000 1352 1.676 1 12.200 99.100 data reduction Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ DENZO package data scaling Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ SCALEPACK package phasing Tom Terwilliger terwilliger@LANL.gov http://www.solve.lanl.gov/ SOLVE program phasing Thomas C. Terwilliger terwilliger@lanl.gov 1-Jun-2008 http://www.solve.lanl.gov/ RESOLVE program 2.13 refinement Paul D. Adams PDAdams@lbl.gov C++ http://www.phenix-online.org/ PHENIX package 1.6.1_357 data extraction PDB deposit@deposit.rcsb.org June 10, 2010 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.10 data collection JBluIce-EPICS data reduction HKL-2000 Crystal structure of the Salmonella transcriptional regulator SlyA in complex with DNA 1 N N 1 N N 2 N N 3 N N A PRO 4 A PRO 7 HELX_P A LYS 25 A LYS 28 1 1 22 A PRO 26 A PRO 29 HELX_P A GLU 28 A GLU 31 5 2 3 A THR 30 A THR 33 HELX_P A HIS 41 A HIS 44 1 3 12 A SER 48 A SER 51 HELX_P A GLY 57 A GLY 60 1 4 10 A GLU 59 A GLU 62 HELX_P A ASP 72 A ASP 75 1 5 14 A LYS 95 A LYS 98 HELX_P A LEU 115 A LEU 118 1 6 21 A SER 119 A SER 122 HELX_P A HIS 141 A HIS 144 1 7 23 B PRO 4 B PRO 7 HELX_P B LYS 25 B LYS 28 1 8 22 B PRO 26 B PRO 29 HELX_P B GLU 28 B GLU 31 5 9 3 B THR 30 B THR 33 HELX_P B HIS 41 B HIS 44 1 10 12 B SER 48 B SER 51 HELX_P B GLY 57 B GLY 60 1 11 10 B GLU 59 B GLU 62 HELX_P B ASP 72 B ASP 75 1 12 14 B LYS 95 B LYS 98 HELX_P B LEU 115 B LEU 118 1 13 21 B SER 119 B SER 122 HELX_P B HIS 141 B HIS 144 1 14 23 hydrog WATSON-CRICK C DA 2 C N1 DA 2 1_555 D DT 23 D N3 DT 23 1_555 hydrog WATSON-CRICK C DA 2 C N6 DA 2 1_555 D DT 23 D O4 DT 23 1_555 hydrog WATSON-CRICK C DT 3 C N3 DT 3 1_555 D DA 22 D N1 DA 22 1_555 hydrog WATSON-CRICK C DT 3 C O4 DT 3 1_555 D DA 22 D N6 DA 22 1_555 hydrog WATSON-CRICK C DA 4 C N1 DA 4 1_555 D DT 21 D N3 DT 21 1_555 hydrog WATSON-CRICK C DA 4 C N6 DA 4 1_555 D DT 21 D O4 DT 21 1_555 hydrog WATSON-CRICK C DA 5 C N1 DA 5 1_555 D DT 20 D N3 DT 20 1_555 hydrog WATSON-CRICK C DA 5 C N6 DA 5 1_555 D DT 20 D O4 DT 20 1_555 hydrog WATSON-CRICK C DC 6 C N3 DC 6 1_555 D DG 19 D N1 DG 19 1_555 hydrog WATSON-CRICK C DC 6 C N4 DC 6 1_555 D DG 19 D O6 DG 19 1_555 hydrog WATSON-CRICK C DC 6 C O2 DC 6 1_555 D DG 19 D N2 DG 19 1_555 hydrog WATSON-CRICK C DT 7 C N3 DT 7 1_555 D DA 18 D N1 DA 18 1_555 hydrog WATSON-CRICK C DT 7 C O4 DT 7 1_555 D DA 18 D N6 DA 18 1_555 hydrog WATSON-CRICK C DT 8 C N3 DT 8 1_555 D DA 17 D N1 DA 17 1_555 hydrog WATSON-CRICK C DT 8 C O4 DT 8 1_555 D DA 17 D N6 DA 17 1_555 hydrog WATSON-CRICK C DA 9 C N1 DA 9 1_555 D DT 16 D N3 DT 16 1_555 hydrog WATSON-CRICK C DA 9 C N6 DA 9 1_555 D DT 16 D O4 DT 16 1_555 hydrog WATSON-CRICK C DG 10 C N1 DG 10 1_555 D DC 15 D N3 DC 15 1_555 hydrog WATSON-CRICK C DG 10 C N2 DG 10 1_555 D DC 15 D O2 DC 15 1_555 hydrog WATSON-CRICK C DG 10 C O6 DG 10 1_555 D DC 15 D N4 DC 15 1_555 hydrog WATSON-CRICK C DC 11 C N3 DC 11 1_555 D DG 14 D N1 DG 14 1_555 hydrog WATSON-CRICK C DC 11 C N4 DC 11 1_555 D DG 14 D O6 DG 14 1_555 hydrog WATSON-CRICK C DC 11 C O2 DC 11 1_555 D DG 14 D N2 DG 14 1_555 hydrog WATSON-CRICK C DA 12 C N1 DA 12 1_555 D DT 13 D N3 DT 13 1_555 hydrog WATSON-CRICK C DA 12 C N6 DA 12 1_555 D DT 13 D O4 DT 13 1_555 hydrog WATSON-CRICK C DA 13 C N1 DA 13 1_555 D DT 12 D N3 DT 12 1_555 hydrog WATSON-CRICK C DA 13 C N6 DA 13 1_555 D DT 12 D O4 DT 12 1_555 hydrog WATSON-CRICK C DG 14 C N1 DG 14 1_555 D DC 11 D N3 DC 11 1_555 hydrog WATSON-CRICK C DG 14 C N2 DG 14 1_555 D DC 11 D O2 DC 11 1_555 hydrog WATSON-CRICK C DG 14 C O6 DG 14 1_555 D DC 11 D N4 DC 11 1_555 hydrog WATSON-CRICK C DC 15 C N3 DC 15 1_555 D DG 10 D N1 DG 10 1_555 hydrog WATSON-CRICK C DC 15 C N4 DC 15 1_555 D DG 10 D O6 DG 10 1_555 hydrog WATSON-CRICK C DC 15 C O2 DC 15 1_555 D DG 10 D N2 DG 10 1_555 hydrog WATSON-CRICK C DT 16 C N3 DT 16 1_555 D DA 9 D N1 DA 9 1_555 hydrog WATSON-CRICK C DT 16 C O4 DT 16 1_555 D DA 9 D N6 DA 9 1_555 hydrog WATSON-CRICK C DA 17 C N1 DA 17 1_555 D DT 8 D N3 DT 8 1_555 hydrog WATSON-CRICK C DA 17 C N6 DA 17 1_555 D DT 8 D O4 DT 8 1_555 hydrog WATSON-CRICK C DA 18 C N1 DA 18 1_555 D DT 7 D N3 DT 7 1_555 hydrog WATSON-CRICK C DA 18 C N6 DA 18 1_555 D DT 7 D O4 DT 7 1_555 hydrog WATSON-CRICK C DT 19 C N3 DT 19 1_555 D DA 6 D N1 DA 6 1_555 hydrog WATSON-CRICK C DT 19 C O4 DT 19 1_555 D DA 6 D N6 DA 6 1_555 hydrog WATSON-CRICK C DT 20 C N3 DT 20 1_555 D DA 5 D N1 DA 5 1_555 hydrog WATSON-CRICK C DT 20 C O4 DT 20 1_555 D DA 5 D N6 DA 5 1_555 hydrog WATSON-CRICK C DA 21 C N1 DA 21 1_555 D DT 4 D N3 DT 4 1_555 hydrog WATSON-CRICK C DA 21 C N6 DA 21 1_555 D DT 4 D O4 DT 4 1_555 hydrog WATSON-CRICK C DT 22 C N3 DT 22 1_555 D DA 3 D N1 DA 3 1_555 hydrog WATSON-CRICK C DT 22 C O4 DT 22 1_555 D DA 3 D N6 DA 3 1_555 hydrog WATSON-CRICK C DA 23 C N1 DA 23 1_555 D DT 2 D N3 DT 2 1_555 hydrog WATSON-CRICK C DA 23 C N6 DA 23 1_555 D DT 2 D O4 DT 2 1_555 TRANSCRIPTION/DNA MarR/SlyA protein family, winged helix-turn-helix, transcriptonal regulator, protein-DNA complex, TRANSCRIPTION-DNA complex A B A GLU 2 A GLU 5 A SER 142 A SER 145 CHAIN A OR CHAIN C B SER 3 B SER 6 B SER 142 B SER 145 CHAIN B OR CHAIN D given -0.812060 -0.582972 0.026502 -0.576007 0.793414 -0.196750 0.093672 -0.175038 -0.980096 21.851400 33.825699 258.697998 SLYA_SALTY UNP 1 1 P40676 MESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEDKGLISRQT CASDRRAKRIKLTEKADALIAEMEEVIHKTRGEILAGISSEEIELLIKLIAKLEHNIMELHSHD 3Q5F PDB 2 3Q5F 3Q5F PDB 3 3Q5F 1 144 3Q5F 1 144 P40676 A 1 4 147 1 144 3Q5F 1 144 P40676 B 1 4 147 1 23 3Q5F 1 23 3Q5F C 2 1 23 1 23 3Q5F 1 23 3Q5F D 3 1 23 1 expression tag SER -2 3Q5F A P40676 UNP 1 1 expression tag ASN -1 3Q5F A P40676 UNP 2 1 expression tag ALA 0 3Q5F A P40676 UNP 3 1 ASP SEE REMARK 999 GLU 97 3Q5F A P40676 UNP 97 100 1 ALA SEE REMARK 999 PRO 98 3Q5F A P40676 UNP 98 101 2 expression tag SER -2 3Q5F B P40676 UNP 1 2 expression tag ASN -1 3Q5F B P40676 UNP 2 2 expression tag ALA 0 3Q5F B P40676 UNP 3 2 ASP SEE REMARK 999 GLU 97 3Q5F B P40676 UNP 97 100 2 ALA SEE REMARK 999 PRO 98 3Q5F B P40676 UNP 98 101 2 2 anti-parallel anti-parallel A ILE 76 A ILE 79 A THR 80 A THR 83 A LYS 88 A LYS 91 A LEU 92 A LEU 95 B ILE 76 B ILE 79 B THR 80 B THR 83 B LYS 88 B LYS 91 B LEU 92 B LEU 95 92 P 41 21 2