0.009374
0.000000
0.000000
0.000000
0.009374
0.000000
0.000000
0.000000
0.006842
0.00000
0.00000
0.00000
Bachas, S.
Eginton, C.
Gunio, G.
Wade, H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
106.676
106.676
146.165
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C22 H24 N2 O8
444.435
TETRACYCLINE
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
O
N
89
N
P
N
90
N
O
N
91
N
O
N
92
N
O
N
93
N
C
N
94
R
C
N
95
N
O
N
96
S
C
N
97
N
O
N
98
N
C
N
99
R
C
Y
100
N
N
Y
101
N
C
Y
102
N
N
Y
103
N
C
Y
104
N
C
N
105
N
N
Y
106
N
N
Y
107
N
C
Y
108
N
N
Y
109
N
C
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
O
N
125
N
P
N
126
N
O
N
127
N
O
N
128
N
O
N
129
N
C
N
130
R
C
N
131
N
O
N
132
S
C
N
133
N
O
N
134
N
C
N
135
R
C
N
136
N
N
N
137
N
C
N
138
N
O
N
139
N
N
N
140
N
C
N
141
N
N
N
142
N
C
N
143
N
C
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
P
N
160
N
O
N
161
N
O
N
162
N
O
N
163
N
C
N
164
R
C
N
165
N
O
N
166
S
C
N
167
N
O
N
168
N
C
N
169
R
C
Y
170
N
N
Y
171
N
C
Y
172
N
N
Y
173
N
C
N
174
N
C
N
175
N
O
N
176
N
N
N
177
N
C
N
178
N
N
N
179
N
N
Y
180
N
C
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
O
N
196
N
P
N
197
N
O
N
198
N
O
N
199
N
O
N
200
N
C
N
201
R
C
N
202
N
O
N
203
S
C
N
204
N
O
N
205
N
C
N
206
R
C
N
207
N
N
N
208
N
C
N
209
N
O
N
210
N
N
N
211
N
C
N
212
N
O
N
213
N
C
N
214
N
C
N
215
N
C
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
C
N
238
N
O
N
239
N
N
N
240
N
O
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
O
N
259
N
O
N
260
N
O
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
N
C
N
272
N
C
N
273
N
O
N
274
N
O
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
C
N
281
N
O
N
282
N
C
N
283
N
O
N
284
N
C
N
285
N
O
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
N
N
295
S
C
N
296
N
C
N
297
N
O
N
298
N
C
Y
299
N
C
Y
300
N
N
Y
301
N
C
Y
302
N
C
Y
303
N
N
N
304
N
O
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
O
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
S
C
N
323
N
C
N
324
N
C
N
325
N
C
N
326
N
O
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
N
N
341
S
C
N
342
N
C
N
343
N
O
N
344
N
C
N
345
N
C
N
346
N
C
N
347
N
C
N
348
N
O
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
N
N
363
S
C
N
364
N
C
N
365
N
O
N
366
N
C
N
367
N
C
N
368
N
C
N
369
N
C
N
370
N
N
N
371
N
O
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
N
N
388
S
C
N
389
N
C
N
390
N
O
N
391
N
C
N
392
N
C
N
393
N
S
N
394
N
C
N
395
N
O
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
N
N
408
S
C
N
409
N
C
N
410
N
O
N
411
N
C
Y
412
N
C
Y
413
N
C
Y
414
N
C
Y
415
N
C
Y
416
N
C
Y
417
N
C
N
418
N
O
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
N
N
431
S
C
N
432
N
C
N
433
N
O
N
434
N
C
N
435
N
C
N
436
N
C
N
437
N
O
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
N
N
448
S
C
N
449
N
C
N
450
N
O
N
451
N
C
N
452
N
O
N
453
N
O
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
C
N
462
N
O
N
463
N
C
N
464
N
C
N
465
N
O
N
466
N
N
N
467
N
C
N
468
N
O
N
469
S
C
N
470
N
N
N
471
N
C
N
472
N
C
N
473
S
C
N
474
N
C
N
475
S
C
N
476
S
C
N
477
N
C
N
478
N
O
Y
479
N
C
Y
480
N
C
Y
481
N
C
Y
482
N
C
Y
483
N
C
N
484
N
O
Y
485
N
C
N
486
N
C
N
487
N
O
N
488
N
C
N
489
N
C
N
490
N
O
N
491
S
C
N
492
N
O
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
H
N
501
N
H
N
502
N
H
N
503
N
H
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
H
N
508
N
H
N
509
N
H
N
510
N
H
N
511
N
H
N
512
N
H
N
513
N
H
N
514
N
H
N
515
N
H
N
516
N
H
N
517
N
N
N
518
S
C
N
519
N
C
N
520
N
O
N
521
R
C
N
522
N
O
N
523
N
C
N
524
N
O
N
525
N
H
N
526
N
H
N
527
N
H
N
528
N
H
N
529
N
H
N
530
N
H
N
531
N
H
N
532
N
H
N
533
N
H
N
534
N
N
N
535
S
C
N
536
N
C
N
537
N
O
N
538
N
C
Y
539
N
C
Y
540
N
C
Y
541
N
C
Y
542
N
C
Y
543
N
C
Y
544
N
C
N
545
N
O
N
546
N
O
N
547
N
H
N
548
N
H
N
549
N
H
N
550
N
H
N
551
N
H
N
552
N
H
N
553
N
H
N
554
N
H
N
555
N
H
N
556
N
H
N
557
N
H
N
558
N
N
N
559
S
C
N
560
N
C
N
561
N
O
N
562
N
C
N
563
N
C
N
564
N
C
N
565
N
O
N
566
N
H
N
567
N
H
N
568
N
H
N
569
N
H
N
570
N
H
N
571
N
H
N
572
N
H
N
573
N
H
N
574
N
H
N
575
N
H
N
576
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
Y
106
N
sing
Y
107
N
sing
Y
108
N
doub
N
109
N
sing
Y
110
N
sing
Y
111
N
sing
Y
112
N
doub
N
113
N
sing
Y
114
N
doub
N
115
N
sing
N
116
N
sing
Y
117
N
sing
Y
118
N
doub
N
119
N
sing
Y
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
Y
179
N
sing
Y
180
N
sing
Y
181
N
doub
N
182
N
sing
Y
183
N
sing
N
184
N
sing
Y
185
N
doub
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
doub
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
doub
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
doub
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
doub
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
doub
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
doub
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
Y
302
N
sing
Y
303
N
doub
Y
304
N
doub
N
305
N
sing
Y
306
N
sing
N
307
N
sing
Y
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
doub
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
doub
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
doub
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
doub
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
Y
410
N
doub
Y
411
N
sing
Y
412
N
sing
N
413
N
sing
Y
414
N
doub
N
415
N
sing
Y
416
N
doub
N
417
N
sing
Y
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
doub
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
doub
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
doub
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
doub
N
457
N
doub
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
sing
Y
491
N
doub
Y
492
N
sing
Y
493
N
sing
N
494
N
sing
Y
495
N
doub
N
496
N
sing
Y
497
N
sing
N
498
N
sing
N
499
N
sing
Y
500
N
doub
N
501
N
sing
N
502
N
sing
N
503
N
doub
N
504
N
sing
N
505
N
doub
N
506
N
sing
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
N
512
N
sing
N
513
N
sing
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
doub
N
518
N
sing
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
N
523
N
sing
N
524
N
sing
N
525
N
sing
N
526
N
sing
N
527
N
sing
N
528
N
sing
N
529
N
sing
N
530
N
sing
N
531
N
sing
N
532
N
sing
N
533
N
doub
N
534
N
sing
N
535
N
sing
N
536
N
sing
N
537
N
sing
Y
538
N
doub
Y
539
N
sing
Y
540
N
sing
N
541
N
sing
Y
542
N
doub
N
543
N
sing
Y
544
N
doub
N
545
N
sing
Y
546
N
sing
N
547
N
sing
N
548
N
sing
N
549
N
sing
N
550
N
sing
N
551
N
sing
N
552
N
sing
N
553
N
sing
N
554
N
sing
N
555
N
sing
N
556
N
sing
N
557
N
doub
N
558
N
sing
N
559
N
sing
N
560
N
sing
N
561
N
sing
N
562
N
sing
N
563
N
sing
N
564
N
sing
N
565
N
sing
N
566
N
sing
N
567
N
sing
N
568
N
sing
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
108
11046
11051
10.1073/pnas.1104850108
21690368
Structural contributions to multidrug recognition in the multidrug resistance (MDR) gene regulator, BmrR.
2011
10.2210/pdb3q5p/pdb
pdb_00003q5p
100
1
CCD
2009-06-24
MARMOSAIC 325 mm CCD
Double Crystal Monochromator
SINGLE WAVELENGTH
M
x-ray
1
0.97946
1.0
BL9-2
SSRL
0.97946
SYNCHROTRON
SSRL BEAMLINE BL9-2
32649.332
Multidrug-efflux transporter 1 regulator
1
man
polymer
7058.536
23 bp BmrR promoter DNA
1
syn
polymer
444.435
TETRACYCLINE
1
syn
non-polymer
92.094
GLYCEROL
2
syn
non-polymer
18.015
water
15
nat
water
no
no
MKESYYSIGEVSKLANVSIKALRYYDKIDLFKPAYVDPDTSYRYYTDSQLIHLDLIKSLKYIGTPLEEMKKAQDLEMEEL
FAFYTEQERQIREKLDFLSALEQTISLVKKRMKRQMEYPALGEVFVLDEEEIRIIQTEAEGLGPENVLNASYSKLKKFIE
SADGFTNNSYGATFSFQPYTSIDEMTYRHIFTPVLTNKQISSITPDMEITTIPKGRYACIAYNFSPEHYFLNLQKLIKYI
ADRQLTVVSDVYELIIPIHYSPKKQEEYRVEMKIRILD
MKESYYSIGEVSKLANVSIKALRYYDKIDLFKPAYVDPDTSYRYYTDSQLIHLDLIKSLKYIGTPLEEMKKAQDLEMEEL
FAFYTEQERQIREKLDFLSALEQTISLVKKRMKRQMEYPALGEVFVLDEEEIRIIQTEAEGLGPENVLNASYSKLKKFIE
SADGFTNNSYGATFSFQPYTSIDEMTYRHIFTPVLTNKQISSITPDMEITTIPKGRYACIAYNFSPEHYFLNLQKLIKYI
ADRQLTVVSDVYELIIPIHYSPKKQEEYRVEMKIRILD
A
polypeptide(L)
no
no
(DG)(DA)(DC)(DC)(DC)(DT)(DC)(DC)(DC)(DC)(DT)(DT)(DA)(DG)(DG)(DG)(DG)(DA)(DG)(DG)
(DG)(DT)(DC)
GACCCTCCCCTTAGGGGAGGGTC
B
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
bmrR, bmr1R, BSU24020
1423
Bacillus subtilis
562
Escherichia coli
1
5.236
76.509
VAPOR DIFFUSION, HANGING DROP
7
1.0 M Sodium Malonate 0.05% jeffamine pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 291K
291
-30.459
B
-12
B
12
17.647
B_DG-12:DC12_B
1
-38.395
-0.639
-1.545
0.261
0.970
1
21
B
-11
B
11
33.121
B_DA-11:DT11_B
2
-43.038
-2.406
-0.119
-0.112
7.596
1
19
B
-10
B
10
0.882
B_DC-10:DG10_B
3
-21.764
0.032
-0.222
-0.033
14.944
1
19
B
-9
B
9
2.287
B_DC-9:DG9_B
4
-27.405
0.105
-0.315
0.029
-17.901
1
19
B
-8
B
8
-2.796
B_DC-8:DG8_B
5
-11.956
0.224
0.724
-0.211
-7.016
1
20
B
-7
B
7
-12.966
B_DT-7:DA7_B
6
-5.300
-0.576
-0.170
-0.259
14.375
1
19
B
-6
B
6
-1.054
B_DC-6:DG6_B
7
-11.797
-0.279
-1.104
-0.420
6.280
1
19
B
-5
B
5
-1.559
B_DC-5:DG5_B
8
-4.774
0.496
-0.911
-0.277
-5.039
1
19
B
-4
B
4
-12.343
B_DC-4:DG4_B
9
-2.258
-0.181
-0.202
-0.070
10.596
1
19
B
-3
B
3
-4.314
B_DC-3:DG3_B
10
4.075
-0.368
-0.306
-0.110
21.196
1
20
B
-2
B
2
-7.303
B_DT-2:DA2_B
11
-1.592
-0.050
-0.603
-0.318
-30.459
B
-12
B
12
17.647
B_DG-12:DC12_B
12
-38.395
-0.639
-1.545
0.261
0.970
1
21
B
-11
B
11
33.121
B_DA-11:DT11_B
13
-43.038
-2.406
-0.119
-0.112
7.596
1
19
B
-10
B
10
0.882
B_DC-10:DG10_B
14
-21.764
0.032
-0.222
-0.033
14.944
1
19
B
-9
B
9
2.287
B_DC-9:DG9_B
15
-27.405
0.105
-0.315
0.029
-17.901
1
19
B
-8
B
8
-2.796
B_DC-8:DG8_B
16
-11.956
0.224
0.724
-0.211
-7.016
1
20
B
-7
B
7
-12.966
B_DT-7:DA7_B
17
-5.300
-0.576
-0.170
-0.259
14.375
1
19
B
-6
B
6
-1.054
B_DC-6:DG6_B
18
-11.797
-0.279
-1.104
-0.420
6.280
1
19
B
-5
B
5
-1.559
B_DC-5:DG5_B
19
-4.774
0.496
-0.911
-0.277
-5.039
1
19
B
-4
B
4
-12.343
B_DC-4:DG4_B
20
-2.258
-0.181
-0.202
-0.070
10.596
1
19
B
-3
B
3
-4.314
B_DC-3:DG3_B
21
4.075
-0.368
-0.306
-0.110
21.196
1
20
B
-2
B
2
-7.303
B_DT-2:DA2_B
22
-1.592
-0.050
-0.603
-0.318
2.008
32.128
B
B
-12
-11
5.915
B
B
12
11
2.404
3.110
0.299
1.227
BB_DG-12DA-11:DT11DC12_BB
1
-16.905
32.149
27.246
1.808
-2.763
3.573
53.448
B
B
-11
-10
-11.543
B
B
11
10
3.608
-10.290
-0.444
0.010
BB_DA-11DC-10:DG10DT11_BB
2
-8.146
9.137
51.927
0.736
-0.080
3.068
30.677
B
B
-10
-9
7.550
B
B
10
9
3.145
3.983
0.375
-0.448
BB_DC-10DC-9:DG9DG10_BB
3
0.495
-0.939
30.419
-1.594
-0.615
3.873
39.938
B
B
-9
-8
8.042
B
B
9
8
4.051
5.422
-0.301
-0.718
BB_DC-9DC-8:DG8DG9_BB
4
-10.106
14.991
38.320
-1.824
-1.000
2.342
26.628
B
B
-8
-7
19.747
B
B
8
7
3.117
8.821
-1.095
-0.655
BB_DC-8DT-7:DA7DG8_BB
5
6.929
-15.511
24.189
-3.447
3.968
2.813
36.788
B
B
-7
-6
-1.530
B
B
7
6
2.676
-0.960
0.994
-0.009
BB_DT-7DC-6:DG6DA7_BB
6
7.028
-11.202
36.121
0.097
-0.765
3.228
37.543
B
B
-6
-5
21.200
B
B
6
5
3.548
13.364
-0.358
-0.270
BB_DC-6DC-5:DG5DG6_BB
7
0.879
-1.395
35.154
-2.291
0.679
3.409
28.837
B
B
-5
-4
15.784
B
B
5
4
3.662
7.751
-0.438
-0.563
BB_DC-5DC-4:DG4DG5_BB
8
-3.275
6.670
27.607
-3.042
0.073
2.992
38.688
B
B
-4
-3
3.691
B
B
4
3
2.990
2.443
1.037
-0.496
BB_DC-4DC-3:DG3DG4_BB
9
1.547
-2.337
38.584
-1.023
-1.392
2.977
22.034
B
B
-3
-2
1.350
B
B
3
2
3.326
0.512
-1.124
-0.521
BB_DC-3DT-2:DA2DG3_BB
10
4.990
-13.170
21.462
-1.556
4.812
2.008
32.128
B
B
-12
-11
5.915
B
B
12
11
2.404
3.110
0.299
1.227
BB_DG-12DA-11:DT11DC12_BB
11
-16.905
32.149
27.246
1.808
-2.763
3.573
53.448
B
B
-11
-10
-11.543
B
B
11
10
3.608
-10.290
-0.444
0.010
BB_DA-11DC-10:DG10DT11_BB
12
-8.146
9.137
51.927
0.736
-0.080
3.068
30.677
B
B
-10
-9
7.550
B
B
10
9
3.145
3.983
0.375
-0.448
BB_DC-10DC-9:DG9DG10_BB
13
0.495
-0.939
30.419
-1.594
-0.615
3.873
39.938
B
B
-9
-8
8.042
B
B
9
8
4.051
5.422
-0.301
-0.718
BB_DC-9DC-8:DG8DG9_BB
14
-10.106
14.991
38.320
-1.824
-1.000
2.342
26.628
B
B
-8
-7
19.747
B
B
8
7
3.117
8.821
-1.095
-0.655
BB_DC-8DT-7:DA7DG8_BB
15
6.929
-15.511
24.189
-3.447
3.968
2.813
36.788
B
B
-7
-6
-1.530
B
B
7
6
2.676
-0.960
0.994
-0.009
BB_DT-7DC-6:DG6DA7_BB
16
7.028
-11.201
36.121
0.097
-0.765
3.228
37.543
B
B
-6
-5
21.200
B
B
6
5
3.548
13.364
-0.358
-0.270
BB_DC-6DC-5:DG5DG6_BB
17
0.879
-1.395
35.154
-2.291
0.679
3.409
28.838
B
B
-5
-4
15.784
B
B
5
4
3.662
7.751
-0.438
-0.563
BB_DC-5DC-4:DG4DG5_BB
18
-3.275
6.670
27.607
-3.042
0.073
2.992
38.688
B
B
-4
-3
3.691
B
B
4
3
2.990
2.443
1.037
-0.496
BB_DC-4DC-3:DG3DG4_BB
19
1.547
-2.337
38.584
-1.023
-1.392
2.977
22.034
B
B
-3
-2
1.350
B
B
3
2
3.326
0.512
-1.124
-0.521
BB_DC-3DT-2:DA2DG3_BB
20
4.990
-13.170
21.462
-1.556
4.812
software
software
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Database references
Refinement description
Data collection
Refinement description
Data collection
Database references
Derived calculations
1
0
2011-06-15
1
1
2011-07-13
1
2
2011-07-20
1
3
2017-11-08
1
4
2019-07-17
1
5
2024-02-21
_software.classification
_software.contact_author
_software.contact_author_email
_software.location
_software.name
_software.type
_software.version
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2010-12-29
REL
REL
TAC
TETRACYCLINE
GOL
GLYCEROL
HOH
water
23 bp promoter of Bmr efflux pump gene synthesized by IDT
sample
TAC
7101
3
TAC
TAC
7101
A
GOL
3968
4
GOL
GOL
3968
A
GOL
3968
4
GOL
GOL
3968
B
HOH
279
5
HOH
HOH
279
A
HOH
280
5
HOH
HOH
280
A
HOH
281
5
HOH
HOH
281
A
HOH
282
5
HOH
HOH
282
A
HOH
283
5
HOH
HOH
283
A
HOH
284
5
HOH
HOH
284
A
HOH
285
5
HOH
HOH
285
A
HOH
286
5
HOH
HOH
286
A
HOH
287
5
HOH
HOH
287
A
HOH
288
5
HOH
HOH
288
A
HOH
289
5
HOH
HOH
289
A
HOH
290
5
HOH
HOH
290
A
HOH
13
5
HOH
HOH
13
B
HOH
14
5
HOH
HOH
14
B
HOH
15
5
HOH
HOH
15
B
n
1
1
A
LYS
2
n
2
LYS
2
A
GLU
3
n
3
GLU
3
A
SER
4
n
4
SER
4
A
TYR
5
n
5
TYR
5
A
TYR
6
n
6
TYR
6
A
SER
7
n
7
SER
7
A
ILE
8
n
8
ILE
8
A
GLY
9
n
9
GLY
9
A
GLU
10
n
10
GLU
10
A
VAL
11
n
11
VAL
11
A
SER
12
n
12
SER
12
A
LYS
13
n
13
LYS
13
A
LEU
14
n
14
LEU
14
A
ALA
15
n
15
ALA
15
A
ASN
16
n
16
ASN
16
A
VAL
17
n
17
VAL
17
A
SER
18
n
18
SER
18
A
ILE
19
n
19
ILE
19
A
LYS
20
n
20
LYS
20
A
ALA
21
n
21
ALA
21
A
LEU
22
n
22
LEU
22
A
ARG
23
n
23
ARG
23
A
TYR
24
n
24
TYR
24
A
TYR
25
n
25
TYR
25
A
ASP
26
n
26
ASP
26
A
LYS
27
n
27
LYS
27
A
ILE
28
n
28
ILE
28
A
ASP
29
n
29
ASP
29
A
LEU
30
n
30
LEU
30
A
PHE
31
n
31
PHE
31
A
LYS
32
n
32
LYS
32
A
PRO
33
n
33
PRO
33
A
ALA
34
n
34
ALA
34
A
TYR
35
n
35
TYR
35
A
VAL
36
n
36
VAL
36
A
ASP
37
n
37
ASP
37
A
PRO
38
n
38
PRO
38
A
ASP
39
n
39
ASP
39
A
THR
40
n
40
THR
40
A
SER
41
n
41
SER
41
A
TYR
42
n
42
TYR
42
A
ARG
43
n
43
ARG
43
A
TYR
44
n
44
TYR
44
A
TYR
45
n
45
TYR
45
A
THR
46
n
46
THR
46
A
ASP
47
n
47
ASP
47
A
SER
48
n
48
SER
48
A
GLN
49
n
49
GLN
49
A
LEU
50
n
50
LEU
50
A
ILE
51
n
51
ILE
51
A
HIS
52
n
52
HIS
52
A
LEU
53
n
53
LEU
53
A
ASP
54
n
54
ASP
54
A
LEU
55
n
55
LEU
55
A
ILE
56
n
56
ILE
56
A
LYS
57
n
57
LYS
57
A
SER
58
n
58
SER
58
A
LEU
59
n
59
LEU
59
A
LYS
60
n
60
LYS
60
A
TYR
61
n
61
TYR
61
A
ILE
62
n
62
ILE
62
A
GLY
63
n
63
GLY
63
A
THR
64
n
64
THR
64
A
PRO
65
n
65
PRO
65
A
LEU
66
n
66
LEU
66
A
GLU
67
n
67
GLU
67
A
GLU
68
n
68
GLU
68
A
MET
69
n
69
MET
69
A
LYS
70
n
70
LYS
70
A
LYS
71
n
71
LYS
71
A
ALA
72
n
72
ALA
72
A
GLN
73
n
73
GLN
73
A
ASP
74
n
74
ASP
74
A
LEU
75
n
75
LEU
75
A
GLU
76
n
76
GLU
76
A
MET
77
n
77
MET
77
A
GLU
78
n
78
GLU
78
A
GLU
79
n
79
GLU
79
A
LEU
80
n
80
LEU
80
A
PHE
81
n
81
PHE
81
A
ALA
82
n
82
ALA
82
A
PHE
83
n
83
PHE
83
A
TYR
84
n
84
TYR
84
A
THR
85
n
85
THR
85
A
GLU
86
n
86
GLU
86
A
GLN
87
n
87
GLN
87
A
GLU
88
n
88
GLU
88
A
ARG
89
n
89
ARG
89
A
GLN
90
n
90
GLN
90
A
ILE
91
n
91
ILE
91
A
ARG
92
n
92
ARG
92
A
GLU
93
n
93
GLU
93
A
LYS
94
n
94
LYS
94
A
LEU
95
n
95
LEU
95
A
ASP
96
n
96
ASP
96
A
PHE
97
n
97
PHE
97
A
LEU
98
n
98
LEU
98
A
SER
99
n
99
SER
99
A
ALA
100
n
100
ALA
100
A
LEU
101
n
101
LEU
101
A
GLU
102
n
102
GLU
102
A
GLN
103
n
103
GLN
103
A
THR
104
n
104
THR
104
A
ILE
105
n
105
ILE
105
A
SER
106
n
106
SER
106
A
LEU
107
n
107
LEU
107
A
VAL
108
n
108
VAL
108
A
LYS
109
n
109
LYS
109
A
LYS
110
n
110
LYS
110
A
ARG
111
n
111
ARG
111
A
MET
112
n
112
MET
112
A
LYS
113
n
113
LYS
113
A
ARG
114
n
114
ARG
114
A
GLN
115
n
115
GLN
115
A
MET
116
n
116
MET
116
A
GLU
117
n
117
GLU
117
A
TYR
118
n
118
TYR
118
A
PRO
119
n
119
PRO
119
A
ALA
120
n
120
ALA
120
A
LEU
121
n
121
LEU
121
A
GLY
122
n
122
GLY
122
A
GLU
123
n
123
GLU
123
A
VAL
124
n
124
VAL
124
A
PHE
125
n
125
PHE
125
A
VAL
126
n
126
VAL
126
A
LEU
127
n
127
LEU
127
A
ASP
128
n
128
ASP
128
A
GLU
129
n
129
GLU
129
A
GLU
130
n
130
GLU
130
A
GLU
131
n
131
GLU
131
A
ILE
132
n
132
ILE
132
A
ARG
133
n
133
ARG
133
A
ILE
134
n
134
ILE
134
A
ILE
135
n
135
ILE
135
A
GLN
136
n
136
GLN
136
A
THR
137
n
137
THR
137
A
GLU
138
n
138
GLU
138
A
ALA
139
n
139
ALA
139
A
GLU
140
n
140
GLU
140
A
GLY
141
n
141
GLY
141
A
LEU
142
n
142
LEU
142
A
GLY
143
n
143
GLY
143
A
PRO
144
n
144
PRO
144
A
GLU
145
n
145
GLU
145
A
ASN
146
n
146
ASN
146
A
VAL
147
n
147
VAL
147
A
LEU
148
n
148
LEU
148
A
ASN
149
n
149
ASN
149
A
ALA
150
n
150
ALA
150
A
SER
151
n
151
SER
151
A
TYR
152
n
152
TYR
152
A
SER
153
n
153
SER
153
A
LYS
154
n
154
LYS
154
A
LEU
155
n
155
LEU
155
A
LYS
156
n
156
LYS
156
A
LYS
157
n
157
LYS
157
A
PHE
158
n
158
PHE
158
A
ILE
159
n
159
ILE
159
A
GLU
160
n
160
GLU
160
A
SER
161
n
161
SER
161
A
ALA
162
n
162
ALA
162
A
ASP
163
n
163
ASP
163
A
GLY
164
n
164
GLY
164
A
PHE
165
n
165
PHE
165
A
THR
166
n
166
THR
166
A
ASN
167
n
167
ASN
167
A
ASN
168
n
168
ASN
168
A
SER
169
n
169
SER
169
A
TYR
170
n
170
TYR
170
A
GLY
171
n
171
GLY
171
A
ALA
172
n
172
ALA
172
A
THR
173
n
173
THR
173
A
PHE
174
n
174
PHE
174
A
SER
175
n
175
SER
175
A
PHE
176
n
176
PHE
176
A
GLN
177
n
177
GLN
177
A
PRO
178
n
178
PRO
178
A
TYR
179
n
179
TYR
179
A
THR
180
n
180
THR
180
A
SER
181
n
181
SER
181
A
ILE
182
n
182
ILE
182
A
ASP
183
n
183
ASP
183
A
GLU
184
n
184
GLU
184
A
MET
185
n
185
MET
185
A
THR
186
n
186
THR
186
A
TYR
187
n
187
TYR
187
A
ARG
188
n
188
ARG
188
A
HIS
189
n
189
HIS
189
A
ILE
190
n
190
ILE
190
A
PHE
191
n
191
PHE
191
A
THR
192
n
192
THR
192
A
PRO
193
n
193
PRO
193
A
VAL
194
n
194
VAL
194
A
LEU
195
n
195
LEU
195
A
THR
196
n
196
THR
196
A
ASN
197
n
197
ASN
197
A
LYS
198
n
198
LYS
198
A
GLN
199
n
199
GLN
199
A
ILE
200
n
200
ILE
200
A
SER
201
n
201
SER
201
A
SER
202
n
202
SER
202
A
ILE
203
n
203
ILE
203
A
THR
204
n
204
THR
204
A
PRO
205
n
205
PRO
205
A
ASP
206
n
206
ASP
206
A
MET
207
n
207
MET
207
A
GLU
208
n
208
GLU
208
A
ILE
209
n
209
ILE
209
A
THR
210
n
210
THR
210
A
THR
211
n
211
THR
211
A
ILE
212
n
212
ILE
212
A
PRO
213
n
213
PRO
213
A
LYS
214
n
214
LYS
214
A
GLY
215
n
215
GLY
215
A
ARG
216
n
216
ARG
216
A
TYR
217
n
217
TYR
217
A
ALA
218
n
218
ALA
218
A
CYS
219
n
219
CYS
219
A
ILE
220
n
220
ILE
220
A
ALA
221
n
221
ALA
221
A
TYR
222
n
222
TYR
222
A
ASN
223
n
223
ASN
223
A
PHE
224
n
224
PHE
224
A
SER
225
n
225
SER
225
A
PRO
226
n
226
PRO
226
A
GLU
227
n
227
GLU
227
A
HIS
228
n
228
HIS
228
A
TYR
229
n
229
TYR
229
A
PHE
230
n
230
PHE
230
A
LEU
231
n
231
LEU
231
A
ASN
232
n
232
ASN
232
A
LEU
233
n
233
LEU
233
A
GLN
234
n
234
GLN
234
A
LYS
235
n
235
LYS
235
A
LEU
236
n
236
LEU
236
A
ILE
237
n
237
ILE
237
A
LYS
238
n
238
LYS
238
A
TYR
239
n
239
TYR
239
A
ILE
240
n
240
ILE
240
A
ALA
241
n
241
ALA
241
A
ASP
242
n
242
ASP
242
A
ARG
243
n
243
ARG
243
A
GLN
244
n
244
GLN
244
A
LEU
245
n
245
LEU
245
A
THR
246
n
246
THR
246
A
VAL
247
n
247
VAL
247
A
VAL
248
n
248
VAL
248
A
SER
249
n
249
SER
249
A
ASP
250
n
250
ASP
250
A
VAL
251
n
251
VAL
251
A
TYR
252
n
252
TYR
252
A
GLU
253
n
253
GLU
253
A
LEU
254
n
254
LEU
254
A
ILE
255
n
255
ILE
255
A
ILE
256
n
256
ILE
256
A
PRO
257
n
257
PRO
257
A
ILE
258
n
258
ILE
258
A
HIS
259
n
259
HIS
259
A
TYR
260
n
260
TYR
260
A
SER
261
n
261
SER
261
A
PRO
262
n
262
PRO
262
A
LYS
263
n
263
LYS
263
A
LYS
264
n
264
LYS
264
A
GLN
265
n
265
GLN
265
A
GLU
266
n
266
GLU
266
A
GLU
267
n
267
GLU
267
A
TYR
268
n
268
TYR
268
A
ARG
269
n
269
ARG
269
A
VAL
270
n
270
VAL
270
A
GLU
271
n
271
GLU
271
A
MET
272
n
272
MET
272
A
LYS
273
n
273
LYS
273
A
ILE
274
n
274
ILE
274
A
ARG
275
n
275
ARG
275
A
ILE
276
n
276
ILE
276
A
LEU
277
n
277
LEU
277
A
n
278
278
A
DG
-12
n
1
DG
-12
B
DA
-11
n
2
DA
-11
B
DC
-10
n
3
DC
-10
B
DC
-9
n
4
DC
-9
B
DC
-8
n
5
DC
-8
B
DT
-7
n
6
DT
-7
B
DC
-6
n
7
DC
-6
B
DC
-5
n
8
DC
-5
B
DC
-4
n
9
DC
-4
B
DC
-3
n
10
DC
-3
B
DT
-2
n
11
DT
-2
B
DT
1
n
12
DT
1
B
DA
2
n
13
DA
2
B
DG
3
n
14
DG
3
B
DG
4
n
15
DG
4
B
DG
5
n
16
DG
5
B
DG
6
n
17
DG
6
B
DA
7
n
18
DA
7
B
DG
8
n
19
DG
8
B
DG
9
n
20
DG
9
B
DG
10
n
21
DG
10
B
DT
11
n
22
DT
11
B
DC
12
n
23
DC
12
B
0.8681
0.1735
-0.5031
0.3420
0.1701
0.7083
-0.0171
0.2031
0.0539
-0.0244
-0.0897
-0.0608
0.1037
-0.2545
0.0000
0.4923
0.0437
-0.0148
0.4824
-0.0509
0.4866
refined
48.5248
-12.9632
19.1546
X-RAY DIFFRACTION
0.1357
-0.0780
0.1303
-0.0065
0.1343
0.0925
-0.3006
-0.1893
-0.0943
-0.1729
-0.3140
0.1459
-1.1817
-0.5104
-0.0029
0.7833
0.0662
-0.0814
0.5160
-0.1048
0.7344
refined
68.4604
5.9940
45.2954
X-RAY DIFFRACTION
0.0011
0.0204
0.0043
0.1764
0.0533
0.0263
-0.2676
0.2144
-0.8796
0.3567
0.1446
0.5618
0.0064
-0.9392
0.0037
0.5201
-0.0866
0.0851
0.4524
-0.1351
0.7378
refined
61.5673
19.4653
49.4384
X-RAY DIFFRACTION
0.5218
0.9007
-0.1252
1.1362
0.2682
0.8252
0.1061
-0.1575
-0.1312
0.0929
-0.2282
-0.0179
0.0628
0.1745
0.0001
0.4999
0.0153
-0.0110
0.5593
-0.0007
0.4567
refined
69.3650
23.9701
65.1139
X-RAY DIFFRACTION
0.2301
0.1823
-0.1469
0.0316
-0.0349
0.1205
0.4540
-0.5160
0.0350
0.5930
-0.8625
0.1623
0.5335
-0.8542
0.0015
0.8039
-0.0838
0.0002
0.7904
-0.2635
0.7901
refined
34.7810
-16.0003
33.0795
X-RAY DIFFRACTION
0.2922
0.0382
0.2273
0.0277
0.0570
0.1003
0.6795
0.3109
1.0704
-0.7936
-0.8931
-0.8204
0.1448
-0.6099
0.0011
0.6692
0.2556
-0.1766
1.0332
-0.2553
0.7253
refined
33.8259
18.3120
40.6257
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
(chain A and resid 2:87)
X-RAY DIFFRACTION
2
(chain A and resid 88:116)
X-RAY DIFFRACTION
3
(chain A and resid 152:169)
X-RAY DIFFRACTION
4
(chain A and resid 170:277)
X-RAY DIFFRACTION
5
(chain B and resid -12:1)
X-RAY DIFFRACTION
6
(chain B and resid 2:12)
author_and_software_defined_assembly
PISA
4
tetrameric
13560
-106
32680
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
6_555
x,-y,-z+1/2
crystal symmetry operation
0.0000000000
0.0000000000
73.0825000000
A
N
TYR
6
A
N
TYR
6
A
O
TYR
45
A
O
TYR
45
A
O
TYR
44
A
O
TYR
44
A
N
TYR
35
A
N
TYR
35
A
N
PHE
125
A
N
PHE
125
A
O
CYS
219
A
O
CYS
219
A
N
TYR
222
A
N
TYR
222
A
O
VAL
270
A
O
VAL
270
A
O
LYS
273
A
O
LYS
273
A
N
TYR
252
A
N
TYR
252
A
O
VAL
251
A
O
VAL
251
A
N
PHE
174
A
N
PHE
174
A
N
THR
173
A
N
THR
173
A
O
HIS
189
A
O
HIS
189
A
O
ARG
188
A
O
ARG
188
A
N
ALA
139
A
N
ALA
139
A
N
ILE
132
A
N
ILE
132
A
O
ILE
212
A
O
ILE
212
1
A
CG
LYS
13
A
CG
LYS
13
1
Y
1
A
CD
LYS
13
A
CD
LYS
13
1
Y
1
A
CE
LYS
13
A
CE
LYS
13
1
Y
1
A
NZ
LYS
13
A
NZ
LYS
13
1
Y
1
A
CG
LYS
20
A
CG
LYS
20
1
Y
1
A
CD
LYS
20
A
CD
LYS
20
1
Y
1
A
CE
LYS
20
A
CE
LYS
20
1
Y
1
A
NZ
LYS
20
A
NZ
LYS
20
1
Y
1
A
CG
LYS
27
A
CG
LYS
27
1
Y
1
A
CD
LYS
27
A
CD
LYS
27
1
Y
1
A
CE
LYS
27
A
CE
LYS
27
1
Y
1
A
NZ
LYS
27
A
NZ
LYS
27
1
Y
1
A
CG
LYS
71
A
CG
LYS
71
1
Y
1
A
CD
LYS
71
A
CD
LYS
71
1
Y
1
A
CE
LYS
71
A
CE
LYS
71
1
Y
1
A
NZ
LYS
71
A
NZ
LYS
71
1
Y
1
A
CG
GLU
76
A
CG
GLU
76
1
Y
1
A
CD
GLU
76
A
CD
GLU
76
1
Y
1
A
OE1
GLU
76
A
OE1
GLU
76
1
Y
1
A
OE2
GLU
76
A
OE2
GLU
76
1
Y
1
A
CG
GLU
78
A
CG
GLU
78
1
Y
1
A
CD
GLU
78
A
CD
GLU
78
1
Y
1
A
OE1
GLU
78
A
OE1
GLU
78
1
Y
1
A
OE2
GLU
78
A
OE2
GLU
78
1
Y
1
A
CG
ARG
92
A
CG
ARG
92
1
Y
1
A
CD
ARG
92
A
CD
ARG
92
1
Y
1
A
NE
ARG
92
A
NE
ARG
92
1
Y
1
A
CZ
ARG
92
A
CZ
ARG
92
1
Y
1
A
NH1
ARG
92
A
NH1
ARG
92
1
Y
1
A
NH2
ARG
92
A
NH2
ARG
92
1
Y
1
A
CG
GLU
93
A
CG
GLU
93
1
Y
1
A
CD
GLU
93
A
CD
GLU
93
1
Y
1
A
OE1
GLU
93
A
OE1
GLU
93
1
Y
1
A
OE2
GLU
93
A
OE2
GLU
93
1
Y
1
A
OG
SER
99
A
OG
SER
99
1
Y
1
A
CG
LYS
110
A
CG
LYS
110
1
Y
1
A
CD
LYS
110
A
CD
LYS
110
1
Y
1
A
CE
LYS
110
A
CE
LYS
110
1
Y
1
A
NZ
LYS
110
A
NZ
LYS
110
1
Y
1
A
CG
TYR
118
A
CG
TYR
118
1
Y
1
A
CD1
TYR
118
A
CD1
TYR
118
1
Y
1
A
CD2
TYR
118
A
CD2
TYR
118
1
Y
1
A
CE1
TYR
118
A
CE1
TYR
118
1
Y
1
A
CE2
TYR
118
A
CE2
TYR
118
1
Y
1
A
CZ
TYR
118
A
CZ
TYR
118
1
Y
1
A
OH
TYR
118
A
OH
TYR
118
1
Y
1
A
CG
GLU
123
A
CG
GLU
123
1
Y
1
A
CD
GLU
123
A
CD
GLU
123
1
Y
1
A
OE1
GLU
123
A
OE1
GLU
123
1
Y
1
A
OE2
GLU
123
A
OE2
GLU
123
1
Y
1
A
CG
PHE
125
A
CG
PHE
125
1
Y
1
A
CD1
PHE
125
A
CD1
PHE
125
1
Y
1
A
CD2
PHE
125
A
CD2
PHE
125
1
Y
1
A
CE1
PHE
125
A
CE1
PHE
125
1
Y
1
A
CE2
PHE
125
A
CE2
PHE
125
1
Y
1
A
CZ
PHE
125
A
CZ
PHE
125
1
Y
1
A
CG
LYS
154
A
CG
LYS
154
1
Y
1
A
CD
LYS
154
A
CD
LYS
154
1
Y
1
A
CE
LYS
154
A
CE
LYS
154
1
Y
1
A
NZ
LYS
154
A
NZ
LYS
154
1
Y
1
A
CG
LYS
198
A
CG
LYS
198
1
Y
1
A
CD
LYS
198
A
CD
LYS
198
1
Y
1
A
CE
LYS
198
A
CE
LYS
198
1
Y
1
A
NZ
LYS
198
A
NZ
LYS
198
1
Y
1
A
CG1
ILE
200
A
CG1
ILE
200
1
Y
1
A
CG2
ILE
200
A
CG2
ILE
200
1
Y
1
A
CD1
ILE
200
A
CD1
ILE
200
1
Y
1
A
CG
LYS
263
A
CG
LYS
263
1
Y
1
A
CD
LYS
263
A
CD
LYS
263
1
Y
1
A
CE
LYS
263
A
CE
LYS
263
1
Y
1
A
NZ
LYS
263
A
NZ
LYS
263
1
Y
1
A
CG
LYS
264
A
CG
LYS
264
1
Y
1
A
CD
LYS
264
A
CD
LYS
264
1
Y
1
A
CE
LYS
264
A
CE
LYS
264
1
Y
1
A
NZ
LYS
264
A
NZ
LYS
264
1
Y
1
A
CG
GLU
266
A
CG
GLU
266
1
Y
1
A
CD
GLU
266
A
CD
GLU
266
1
Y
1
A
OE1
GLU
266
A
OE1
GLU
266
1
Y
1
A
OE2
GLU
266
A
OE2
GLU
266
1
Y
1
A
CG
LEU
277
A
CG
LEU
277
1
Y
1
A
CD1
LEU
277
A
CD1
LEU
277
1
Y
1
A
CD2
LEU
277
A
CD2
LEU
277
1
Y
1
A
MET
1
A
MET
1
1
Y
1
A
ASP
278
A
ASP
278
1
Y
1
11.21
1.50
110.50
121.71
A
A
A
N
CA
CB
SER
SER
SER
202
202
202
N
1
5.44
0.30
108.30
113.74
B
B
B
O4'
C1'
N1
DC
DC
DC
-10
-10
-10
N
1
5.82
0.30
108.30
114.12
B
B
B
O4'
C1'
N1
DC
DC
DC
-9
-9
-9
N
1
2.65
0.30
108.30
110.95
B
B
B
O4'
C1'
N1
DT
DT
DT
-7
-7
-7
N
1
6.81
0.30
108.30
115.11
B
B
B
O4'
C1'
N1
DC
DC
DC
-3
-3
-3
N
1
-5.74
0.40
104.50
98.76
B
B
B
O4'
C4'
C3'
DT
DT
DT
-2
-2
-2
N
1
3.11
0.30
108.30
111.41
B
B
B
O4'
C1'
N1
DT
DT
DT
-2
-2
-2
N
1
-3.31
0.40
104.50
101.19
B
B
B
O4'
C4'
C3'
DT
DT
DT
1
1
1
N
1
-6.27
0.80
102.40
96.13
B
B
B
C3'
C2'
C1'
DA
DA
DA
2
2
2
N
1
3.32
0.30
108.30
111.62
B
B
B
O4'
C1'
N9
DG
DG
DG
3
3
3
N
1
-4.60
0.70
108.00
103.40
B
B
B
O4'
C1'
N9
DG
DG
DG
4
4
4
N
1
-4.30
0.70
102.20
97.90
B
B
B
C4'
C3'
C2'
DG
DG
DG
5
5
5
N
1
3.23
0.30
108.30
111.53
B
B
B
O4'
C1'
N9
DG
DG
DG
5
5
5
N
1
5.36
0.30
108.30
113.66
B
B
B
O4'
C1'
N9
DG
DG
DG
6
6
6
N
1
2.65
0.30
108.30
110.95
B
B
B
O4'
C1'
N9
DG
DG
DG
8
8
8
N
1
2.29
0.30
108.30
110.59
B
B
B
O4'
C1'
N9
DG
DG
DG
9
9
9
N
1
A
A
CD
N
PRO
PRO
33
33
-0.087
0.014
1.474
1.387
N
1
B
B
O3'
C3'
DC
DC
-8
-8
-0.038
0.006
1.419
1.381
N
1
A
SER
41
54.82
16.32
1
A
ASN
168
-166.41
-160.12
0.1145
0.0000
0.0000
0.1145
-0.0000
-0.2291
0.9050
0.8950
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : RESIDUAL ONLY
0.2623
0.2163
0.2186
2.942
43.084
775
15979
4.85
86.09
1.000
1.000
0.41
0.5950
1
1.00
MOLECULAR REPLACEMENT
29.23
0.83
1.10
ML
FLAT BULK SOLVENT MODEL
55.039
0.355
2.942
43.084
15
2727
44
468
2200
0.017
2930
1.391
3926
22.694
1077
0.079
445
0.005
421
0.5431
0.3679
3.1265
72
1637
56.00
0.2914
0.2952
3.3679
139
2347
82.00
0.3297
0.2674
3.7066
131
2563
89.00
0.2410
0.2028
4.2426
120
2714
92.00
0.1874
0.1656
5.3436
127
2908
98.00
0.2615
0.2070
43.0884
186
3035
98.00
2.942
50.000
3Q5P
17789
1
95.800
2.950
3.060
1
68.200
3.060
3.180
1
92.100
3.180
3.320
1
99.500
3.320
3.500
1
100.000
3.500
3.720
1
100.000
3.720
4.000
1
99.800
4.000
4.410
1
99.800
4.410
5.040
1
99.800
5.040
6.350
1
99.500
6.350
50.000
1
98.500
refinement
PHENIX
1.6.4_486
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
package
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
data extraction
PDB
deposit@deposit.rcsb.org
June 10, 2010
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.10
data collection
MAR345dtb
phasing
REFMAC
data reduction
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
DENZO
package
Crystal structure of BmrR bound to Tetracycline
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
5
N
N
5
N
N
A
ILE
8
A
ILE
8
HELX_P
A
ASN
16
A
ASN
16
1
1
9
A
SER
18
A
SER
18
HELX_P
A
ILE
28
A
ILE
28
1
2
11
A
ASP
47
A
ASP
47
HELX_P
A
LEU
50
A
LEU
50
5
3
4
A
ILE
51
A
ILE
51
HELX_P
A
GLY
63
A
GLY
63
1
4
13
A
PRO
65
A
PRO
65
HELX_P
A
ASP
74
A
ASP
74
1
5
10
A
GLU
76
A
GLU
76
HELX_P
A
MET
116
A
MET
116
1
6
41
A
LEU
148
A
LEU
148
HELX_P
A
SER
151
A
SER
151
5
7
4
A
TYR
152
A
TYR
152
HELX_P
A
GLY
164
A
GLY
164
1
8
13
A
SER
181
A
SER
181
HELX_P
A
MET
185
A
MET
185
5
9
5
A
SER
225
A
SER
225
HELX_P
A
GLN
244
A
GLN
244
1
10
20
hydrog
DG-DC PAIR
B
DG
-12
B
N1
DG
1
1_555
B
DC
12
B
N3
DC
23
6_555
hydrog
DA-DT PAIR
B
DA
-11
B
N1
DA
2
1_555
B
DT
11
B
N3
DT
22
6_555
hydrog
WATSON-CRICK
B
DC
-10
B
N3
DC
3
1_555
B
DG
10
B
N1
DG
21
6_555
hydrog
WATSON-CRICK
B
DC
-10
B
N4
DC
3
1_555
B
DG
10
B
O6
DG
21
6_555
hydrog
WATSON-CRICK
B
DC
-10
B
O2
DC
3
1_555
B
DG
10
B
N2
DG
21
6_555
hydrog
WATSON-CRICK
B
DC
-9
B
N3
DC
4
1_555
B
DG
9
B
N1
DG
20
6_555
hydrog
WATSON-CRICK
B
DC
-9
B
N4
DC
4
1_555
B
DG
9
B
O6
DG
20
6_555
hydrog
WATSON-CRICK
B
DC
-9
B
O2
DC
4
1_555
B
DG
9
B
N2
DG
20
6_555
hydrog
WATSON-CRICK
B
DC
-8
B
N3
DC
5
1_555
B
DG
8
B
N1
DG
19
6_555
hydrog
WATSON-CRICK
B
DC
-8
B
N4
DC
5
1_555
B
DG
8
B
O6
DG
19
6_555
hydrog
WATSON-CRICK
B
DC
-8
B
O2
DC
5
1_555
B
DG
8
B
N2
DG
19
6_555
hydrog
WATSON-CRICK
B
DT
-7
B
N3
DT
6
1_555
B
DA
7
B
N1
DA
18
6_555
hydrog
WATSON-CRICK
B
DT
-7
B
O4
DT
6
1_555
B
DA
7
B
N6
DA
18
6_555
hydrog
WATSON-CRICK
B
DC
-6
B
N3
DC
7
1_555
B
DG
6
B
N1
DG
17
6_555
hydrog
WATSON-CRICK
B
DC
-6
B
N4
DC
7
1_555
B
DG
6
B
O6
DG
17
6_555
hydrog
WATSON-CRICK
B
DC
-6
B
O2
DC
7
1_555
B
DG
6
B
N2
DG
17
6_555
hydrog
WATSON-CRICK
B
DC
-5
B
N3
DC
8
1_555
B
DG
5
B
N1
DG
16
6_555
hydrog
WATSON-CRICK
B
DC
-5
B
N4
DC
8
1_555
B
DG
5
B
O6
DG
16
6_555
hydrog
WATSON-CRICK
B
DC
-5
B
O2
DC
8
1_555
B
DG
5
B
N2
DG
16
6_555
hydrog
WATSON-CRICK
B
DC
-4
B
N3
DC
9
1_555
B
DG
4
B
N1
DG
15
6_555
hydrog
WATSON-CRICK
B
DC
-4
B
N4
DC
9
1_555
B
DG
4
B
O6
DG
15
6_555
hydrog
WATSON-CRICK
B
DC
-4
B
O2
DC
9
1_555
B
DG
4
B
N2
DG
15
6_555
hydrog
WATSON-CRICK
B
DC
-3
B
N3
DC
10
1_555
B
DG
3
B
N1
DG
14
6_555
hydrog
WATSON-CRICK
B
DC
-3
B
N4
DC
10
1_555
B
DG
3
B
O6
DG
14
6_555
hydrog
WATSON-CRICK
B
DC
-3
B
O2
DC
10
1_555
B
DG
3
B
N2
DG
14
6_555
hydrog
WATSON-CRICK
B
DT
-2
B
N3
DT
11
1_555
B
DA
2
B
N1
DA
13
6_555
hydrog
WATSON-CRICK
B
DT
-2
B
O4
DT
11
1_555
B
DA
2
B
N6
DA
13
6_555
hydrog
DT-DG MISPAIR
B
DT
-2
B
O2
DT
11
1_555
B
DG
3
B
N2
DG
14
6_555
hydrog
WATSON-CRICK
B
DA
2
B
N1
DA
13
1_555
B
DT
-2
B
N3
DT
11
6_555
hydrog
WATSON-CRICK
B
DA
2
B
N6
DA
13
1_555
B
DT
-2
B
O4
DT
11
6_555
hydrog
WATSON-CRICK
B
DG
3
B
N1
DG
14
1_555
B
DC
-3
B
N3
DC
10
6_555
hydrog
WATSON-CRICK
B
DG
3
B
N2
DG
14
1_555
B
DC
-3
B
O2
DC
10
6_555
hydrog
WATSON-CRICK
B
DG
3
B
O6
DG
14
1_555
B
DC
-3
B
N4
DC
10
6_555
hydrog
DG-DT MISPAIR
B
DG
3
B
N2
DG
14
1_555
B
DT
-2
B
O2
DT
11
6_555
hydrog
WATSON-CRICK
B
DG
4
B
N1
DG
15
1_555
B
DC
-4
B
N3
DC
9
6_555
hydrog
WATSON-CRICK
B
DG
4
B
N2
DG
15
1_555
B
DC
-4
B
O2
DC
9
6_555
hydrog
WATSON-CRICK
B
DG
4
B
O6
DG
15
1_555
B
DC
-4
B
N4
DC
9
6_555
hydrog
WATSON-CRICK
B
DG
5
B
N1
DG
16
1_555
B
DC
-5
B
N3
DC
8
6_555
hydrog
WATSON-CRICK
B
DG
5
B
N2
DG
16
1_555
B
DC
-5
B
O2
DC
8
6_555
hydrog
WATSON-CRICK
B
DG
5
B
O6
DG
16
1_555
B
DC
-5
B
N4
DC
8
6_555
hydrog
WATSON-CRICK
B
DG
6
B
N1
DG
17
1_555
B
DC
-6
B
N3
DC
7
6_555
hydrog
WATSON-CRICK
B
DG
6
B
N2
DG
17
1_555
B
DC
-6
B
O2
DC
7
6_555
hydrog
WATSON-CRICK
B
DG
6
B
O6
DG
17
1_555
B
DC
-6
B
N4
DC
7
6_555
hydrog
WATSON-CRICK
B
DA
7
B
N1
DA
18
1_555
B
DT
-7
B
N3
DT
6
6_555
hydrog
WATSON-CRICK
B
DA
7
B
N6
DA
18
1_555
B
DT
-7
B
O4
DT
6
6_555
hydrog
WATSON-CRICK
B
DG
8
B
N1
DG
19
1_555
B
DC
-8
B
N3
DC
5
6_555
hydrog
WATSON-CRICK
B
DG
8
B
N2
DG
19
1_555
B
DC
-8
B
O2
DC
5
6_555
hydrog
WATSON-CRICK
B
DG
8
B
O6
DG
19
1_555
B
DC
-8
B
N4
DC
5
6_555
hydrog
WATSON-CRICK
B
DG
9
B
N1
DG
20
1_555
B
DC
-9
B
N3
DC
4
6_555
hydrog
WATSON-CRICK
B
DG
9
B
N2
DG
20
1_555
B
DC
-9
B
O2
DC
4
6_555
hydrog
WATSON-CRICK
B
DG
9
B
O6
DG
20
1_555
B
DC
-9
B
N4
DC
4
6_555
hydrog
WATSON-CRICK
B
DG
10
B
N1
DG
21
1_555
B
DC
-10
B
N3
DC
3
6_555
hydrog
WATSON-CRICK
B
DG
10
B
N2
DG
21
1_555
B
DC
-10
B
O2
DC
3
6_555
hydrog
WATSON-CRICK
B
DG
10
B
O6
DG
21
1_555
B
DC
-10
B
N4
DC
3
6_555
hydrog
DT-DA PAIR
B
DT
11
B
N3
DT
22
1_555
B
DA
-11
B
N1
DA
2
6_555
hydrog
DC-DG PAIR
B
DC
12
B
N4
DC
23
1_555
B
DG
-12
B
O6
DG
1
6_555
TRANSCRIPTION/DNA/ANTIBIOTIC
multidrug binding, multidrug resistance, Transcription regulator, TRANSCRIPTION-DNA-ANTIBIOTIC complex
BMRR_BACSU
UNP
1
1
P39075
MKESYYSIGEVSKLANVSIKALRYYDKIDLFKPAYVDPDTSYRYYTDSQLIHLDLIKSLKYIGTPLEEMKKAQDLEMEEL
FAFYTEQERQIREKLDFLSALEQTISLVKKRMKRQMEYPALGEVFVLDEEEIRIIQTEAEGIGPENVLNASYSKLKKFIE
SADGFTNNSYGATFSFQPYTSIDEMTYRHIFTPVLTNKQISSITPDMEITTIPKGRYACIAYNFSPEHYFLNLQKLIKYI
ADRQLTVVSDVYELIIPIHYSPKKQEEYRVEMKIRIAE
3Q5P
PDB
2
1
3Q5P
GACCCTCCCCTTAGGGGAGGGTC
1
278
3Q5P
1
278
P39075
A
1
1
278
-12
12
3Q5P
-12
12
3Q5P
B
2
1
23
1
ILE
conflict
LEU
142
3Q5P
A
P39075
UNP
142
142
1
ALA
conflict
LEU
277
3Q5P
A
P39075
UNP
277
277
1
GLU
conflict
ASP
278
3Q5P
A
P39075
UNP
278
278
3
8
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
TYR
6
A
TYR
6
A
SER
7
A
SER
7
A
ARG
43
A
ARG
43
A
TYR
45
A
TYR
45
A
TYR
35
A
TYR
35
A
VAL
36
A
VAL
36
A
VAL
124
A
VAL
124
A
GLU
129
A
GLU
129
A
GLY
215
A
GLY
215
A
ASN
223
A
ASN
223
A
TYR
268
A
TYR
268
A
ILE
276
A
ILE
276
A
VAL
251
A
VAL
251
A
PRO
257
A
PRO
257
A
TYR
170
A
TYR
170
A
PHE
174
A
PHE
174
A
TYR
187
A
TYR
187
A
PRO
193
A
PRO
193
A
ILE
132
A
ILE
132
A
LEU
142
A
LEU
142
A
MET
207
A
MET
207
A
ILE
212
A
ILE
212
BINDING SITE FOR RESIDUE TAC A 7101
A
TAC
7101
Software
12
BINDING SITE FOR RESIDUE GOL A 3968
A
GOL
3968
Software
6
BINDING SITE FOR RESIDUE GOL B 3968
B
GOL
3968
Software
2
A
ILE
51
A
ILE
51
12
6_555
A
PRO
144
A
PRO
144
12
1_555
A
VAL
147
A
VAL
147
12
1_555
A
ASN
149
A
ASN
149
12
1_555
A
TYR
152
A
TYR
152
12
1_555
A
ILE
182
A
ILE
182
12
1_555
A
TYR
187
A
TYR
187
12
1_555
A
PHE
224
A
PHE
224
12
1_555
A
TYR
229
A
TYR
229
12
1_555
A
GLU
253
A
GLU
253
12
1_555
A
ILE
255
A
ILE
255
12
1_555
A
TYR
268
A
TYR
268
12
1_555
A
GLU
131
A
GLU
131
6
1_555
A
ARG
133
A
ARG
133
6
1_555
A
VAL
194
A
VAL
194
6
1_555
A
LEU
195
A
LEU
195
6
1_555
A
THR
196
A
THR
196
6
1_555
A
ASN
197
A
ASN
197
6
1_555
B
DG
-12
B
DG
1
2
1_555
B
HOH
13
G
HOH
2
1_555
95
P 43 2 2