0.009374 0.000000 0.000000 0.000000 0.009374 0.000000 0.000000 0.000000 0.006842 0.00000 0.00000 0.00000 Bachas, S. Eginton, C. Gunio, G. Wade, H. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 106.676 106.676 146.165 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C22 H24 N2 O8 444.435 TETRACYCLINE non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N O N 89 N P N 90 N O N 91 N O N 92 N O N 93 N C N 94 R C N 95 N O N 96 S C N 97 N O N 98 N C N 99 R C Y 100 N N Y 101 N C Y 102 N N Y 103 N C Y 104 N C N 105 N N Y 106 N N Y 107 N C Y 108 N N Y 109 N C N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N O N 125 N P N 126 N O N 127 N O N 128 N O N 129 N C N 130 R C N 131 N O N 132 S C N 133 N O N 134 N C N 135 R C N 136 N N N 137 N C N 138 N O N 139 N N N 140 N C N 141 N N N 142 N C N 143 N C N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N P N 160 N O N 161 N O N 162 N O N 163 N C N 164 R C N 165 N O N 166 S C N 167 N O N 168 N C N 169 R C Y 170 N N Y 171 N C Y 172 N N Y 173 N C N 174 N C N 175 N O N 176 N N N 177 N C N 178 N N N 179 N N Y 180 N C N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N O N 196 N P N 197 N O N 198 N O N 199 N O N 200 N C N 201 R C N 202 N O N 203 S C N 204 N O N 205 N C N 206 R C N 207 N N N 208 N C N 209 N O N 210 N N N 211 N C N 212 N O N 213 N C N 214 N C N 215 N C N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N N N 232 S C N 233 N C N 234 N O N 235 N C N 236 N C N 237 N C N 238 N O N 239 N N N 240 N O N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C N 256 N C N 257 N C N 258 N O N 259 N O N 260 N O N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N N N 271 N C N 272 N C N 273 N O N 274 N O N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N C N 281 N O N 282 N C N 283 N O N 284 N C N 285 N O N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N N N 295 S C N 296 N C N 297 N O N 298 N C Y 299 N C Y 300 N N Y 301 N C Y 302 N C Y 303 N N N 304 N O N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N O N 316 N H N 317 N H N 318 N N N 319 S C N 320 N C N 321 N O N 322 S C N 323 N C N 324 N C N 325 N C N 326 N O N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N N N 341 S C N 342 N C N 343 N O N 344 N C N 345 N C N 346 N C N 347 N C N 348 N O N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N N N 363 S C N 364 N C N 365 N O N 366 N C N 367 N C N 368 N C N 369 N C N 370 N N N 371 N O N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N N N 388 S C N 389 N C N 390 N O N 391 N C N 392 N C N 393 N S N 394 N C N 395 N O N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N N N 408 S C N 409 N C N 410 N O N 411 N C Y 412 N C Y 413 N C Y 414 N C Y 415 N C Y 416 N C Y 417 N C N 418 N O N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N N N 431 S C N 432 N C N 433 N O N 434 N C N 435 N C N 436 N C N 437 N O N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N N N 448 S C N 449 N C N 450 N O N 451 N C N 452 N O N 453 N O N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N C N 462 N O N 463 N C N 464 N C N 465 N O N 466 N N N 467 N C N 468 N O N 469 S C N 470 N N N 471 N C N 472 N C N 473 S C N 474 N C N 475 S C N 476 S C N 477 N C N 478 N O Y 479 N C Y 480 N C Y 481 N C Y 482 N C Y 483 N C N 484 N O Y 485 N C N 486 N C N 487 N O N 488 N C N 489 N C N 490 N O N 491 S C N 492 N O N 493 N H N 494 N H N 495 N H N 496 N H N 497 N H N 498 N H N 499 N H N 500 N H N 501 N H N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 510 N H N 511 N H N 512 N H N 513 N H N 514 N H N 515 N H N 516 N H N 517 N N N 518 S C N 519 N C N 520 N O N 521 R C N 522 N O N 523 N C N 524 N O N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 532 N H N 533 N H N 534 N N N 535 S C N 536 N C N 537 N O N 538 N C Y 539 N C Y 540 N C Y 541 N C Y 542 N C Y 543 N C Y 544 N C N 545 N O N 546 N O N 547 N H N 548 N H N 549 N H N 550 N H N 551 N H N 552 N H N 553 N H N 554 N H N 555 N H N 556 N H N 557 N H N 558 N N N 559 S C N 560 N C N 561 N O N 562 N C N 563 N C N 564 N C N 565 N O N 566 N H N 567 N H N 568 N H N 569 N H N 570 N H N 571 N H N 572 N H N 573 N H N 574 N H N 575 N H N 576 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N sing Y 111 N sing Y 112 N doub N 113 N sing Y 114 N doub N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N sing Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N doub N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N doub N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N doub N 298 N sing N 299 N sing N 300 N sing N 301 N sing Y 302 N sing Y 303 N doub Y 304 N doub N 305 N sing Y 306 N sing N 307 N sing Y 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N doub N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N doub N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N doub N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N doub N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N doub N 406 N sing N 407 N sing N 408 N sing N 409 N sing Y 410 N doub Y 411 N sing Y 412 N sing N 413 N sing Y 414 N doub N 415 N sing Y 416 N doub N 417 N sing Y 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N doub N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N doub N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N doub N 453 N sing N 454 N sing N 455 N sing N 456 N doub N 457 N doub N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N sing N 490 N sing Y 491 N doub Y 492 N sing Y 493 N sing N 494 N sing Y 495 N doub N 496 N sing Y 497 N sing N 498 N sing N 499 N sing Y 500 N doub N 501 N sing N 502 N sing N 503 N doub N 504 N sing N 505 N doub N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N sing N 514 N sing N 515 N sing N 516 N sing N 517 N doub N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing N 524 N sing N 525 N sing N 526 N sing N 527 N sing N 528 N sing N 529 N sing N 530 N sing N 531 N sing N 532 N sing N 533 N doub N 534 N sing N 535 N sing N 536 N sing N 537 N sing Y 538 N doub Y 539 N sing Y 540 N sing N 541 N sing Y 542 N doub N 543 N sing Y 544 N doub N 545 N sing Y 546 N sing N 547 N sing N 548 N sing N 549 N sing N 550 N sing N 551 N sing N 552 N sing N 553 N sing N 554 N sing N 555 N sing N 556 N sing N 557 N doub N 558 N sing N 559 N sing N 560 N sing N 561 N sing N 562 N sing N 563 N sing N 564 N sing N 565 N sing N 566 N sing N 567 N sing N 568 N sing US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 108 11046 11051 10.1073/pnas.1104850108 21690368 Structural contributions to multidrug recognition in the multidrug resistance (MDR) gene regulator, BmrR. 2011 10.2210/pdb3q5p/pdb pdb_00003q5p 100 1 CCD 2009-06-24 MARMOSAIC 325 mm CCD Double Crystal Monochromator SINGLE WAVELENGTH M x-ray 1 0.97946 1.0 BL9-2 SSRL 0.97946 SYNCHROTRON SSRL BEAMLINE BL9-2 32649.332 Multidrug-efflux transporter 1 regulator 1 man polymer 7058.536 23 bp BmrR promoter DNA 1 syn polymer 444.435 TETRACYCLINE 1 syn non-polymer 92.094 GLYCEROL 2 syn non-polymer 18.015 water 15 nat water no no MKESYYSIGEVSKLANVSIKALRYYDKIDLFKPAYVDPDTSYRYYTDSQLIHLDLIKSLKYIGTPLEEMKKAQDLEMEEL FAFYTEQERQIREKLDFLSALEQTISLVKKRMKRQMEYPALGEVFVLDEEEIRIIQTEAEGLGPENVLNASYSKLKKFIE SADGFTNNSYGATFSFQPYTSIDEMTYRHIFTPVLTNKQISSITPDMEITTIPKGRYACIAYNFSPEHYFLNLQKLIKYI ADRQLTVVSDVYELIIPIHYSPKKQEEYRVEMKIRILD MKESYYSIGEVSKLANVSIKALRYYDKIDLFKPAYVDPDTSYRYYTDSQLIHLDLIKSLKYIGTPLEEMKKAQDLEMEEL FAFYTEQERQIREKLDFLSALEQTISLVKKRMKRQMEYPALGEVFVLDEEEIRIIQTEAEGLGPENVLNASYSKLKKFIE SADGFTNNSYGATFSFQPYTSIDEMTYRHIFTPVLTNKQISSITPDMEITTIPKGRYACIAYNFSPEHYFLNLQKLIKYI ADRQLTVVSDVYELIIPIHYSPKKQEEYRVEMKIRILD A polypeptide(L) no no (DG)(DA)(DC)(DC)(DC)(DT)(DC)(DC)(DC)(DC)(DT)(DT)(DA)(DG)(DG)(DG)(DG)(DA)(DG)(DG) (DG)(DT)(DC) GACCCTCCCCTTAGGGGAGGGTC B polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample bmrR, bmr1R, BSU24020 1423 Bacillus subtilis 562 Escherichia coli 1 5.236 76.509 VAPOR DIFFUSION, HANGING DROP 7 1.0 M Sodium Malonate 0.05% jeffamine pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 291K 291 -30.459 B -12 B 12 17.647 B_DG-12:DC12_B 1 -38.395 -0.639 -1.545 0.261 0.970 1 21 B -11 B 11 33.121 B_DA-11:DT11_B 2 -43.038 -2.406 -0.119 -0.112 7.596 1 19 B -10 B 10 0.882 B_DC-10:DG10_B 3 -21.764 0.032 -0.222 -0.033 14.944 1 19 B -9 B 9 2.287 B_DC-9:DG9_B 4 -27.405 0.105 -0.315 0.029 -17.901 1 19 B -8 B 8 -2.796 B_DC-8:DG8_B 5 -11.956 0.224 0.724 -0.211 -7.016 1 20 B -7 B 7 -12.966 B_DT-7:DA7_B 6 -5.300 -0.576 -0.170 -0.259 14.375 1 19 B -6 B 6 -1.054 B_DC-6:DG6_B 7 -11.797 -0.279 -1.104 -0.420 6.280 1 19 B -5 B 5 -1.559 B_DC-5:DG5_B 8 -4.774 0.496 -0.911 -0.277 -5.039 1 19 B -4 B 4 -12.343 B_DC-4:DG4_B 9 -2.258 -0.181 -0.202 -0.070 10.596 1 19 B -3 B 3 -4.314 B_DC-3:DG3_B 10 4.075 -0.368 -0.306 -0.110 21.196 1 20 B -2 B 2 -7.303 B_DT-2:DA2_B 11 -1.592 -0.050 -0.603 -0.318 -30.459 B -12 B 12 17.647 B_DG-12:DC12_B 12 -38.395 -0.639 -1.545 0.261 0.970 1 21 B -11 B 11 33.121 B_DA-11:DT11_B 13 -43.038 -2.406 -0.119 -0.112 7.596 1 19 B -10 B 10 0.882 B_DC-10:DG10_B 14 -21.764 0.032 -0.222 -0.033 14.944 1 19 B -9 B 9 2.287 B_DC-9:DG9_B 15 -27.405 0.105 -0.315 0.029 -17.901 1 19 B -8 B 8 -2.796 B_DC-8:DG8_B 16 -11.956 0.224 0.724 -0.211 -7.016 1 20 B -7 B 7 -12.966 B_DT-7:DA7_B 17 -5.300 -0.576 -0.170 -0.259 14.375 1 19 B -6 B 6 -1.054 B_DC-6:DG6_B 18 -11.797 -0.279 -1.104 -0.420 6.280 1 19 B -5 B 5 -1.559 B_DC-5:DG5_B 19 -4.774 0.496 -0.911 -0.277 -5.039 1 19 B -4 B 4 -12.343 B_DC-4:DG4_B 20 -2.258 -0.181 -0.202 -0.070 10.596 1 19 B -3 B 3 -4.314 B_DC-3:DG3_B 21 4.075 -0.368 -0.306 -0.110 21.196 1 20 B -2 B 2 -7.303 B_DT-2:DA2_B 22 -1.592 -0.050 -0.603 -0.318 2.008 32.128 B B -12 -11 5.915 B B 12 11 2.404 3.110 0.299 1.227 BB_DG-12DA-11:DT11DC12_BB 1 -16.905 32.149 27.246 1.808 -2.763 3.573 53.448 B B -11 -10 -11.543 B B 11 10 3.608 -10.290 -0.444 0.010 BB_DA-11DC-10:DG10DT11_BB 2 -8.146 9.137 51.927 0.736 -0.080 3.068 30.677 B B -10 -9 7.550 B B 10 9 3.145 3.983 0.375 -0.448 BB_DC-10DC-9:DG9DG10_BB 3 0.495 -0.939 30.419 -1.594 -0.615 3.873 39.938 B B -9 -8 8.042 B B 9 8 4.051 5.422 -0.301 -0.718 BB_DC-9DC-8:DG8DG9_BB 4 -10.106 14.991 38.320 -1.824 -1.000 2.342 26.628 B B -8 -7 19.747 B B 8 7 3.117 8.821 -1.095 -0.655 BB_DC-8DT-7:DA7DG8_BB 5 6.929 -15.511 24.189 -3.447 3.968 2.813 36.788 B B -7 -6 -1.530 B B 7 6 2.676 -0.960 0.994 -0.009 BB_DT-7DC-6:DG6DA7_BB 6 7.028 -11.202 36.121 0.097 -0.765 3.228 37.543 B B -6 -5 21.200 B B 6 5 3.548 13.364 -0.358 -0.270 BB_DC-6DC-5:DG5DG6_BB 7 0.879 -1.395 35.154 -2.291 0.679 3.409 28.837 B B -5 -4 15.784 B B 5 4 3.662 7.751 -0.438 -0.563 BB_DC-5DC-4:DG4DG5_BB 8 -3.275 6.670 27.607 -3.042 0.073 2.992 38.688 B B -4 -3 3.691 B B 4 3 2.990 2.443 1.037 -0.496 BB_DC-4DC-3:DG3DG4_BB 9 1.547 -2.337 38.584 -1.023 -1.392 2.977 22.034 B B -3 -2 1.350 B B 3 2 3.326 0.512 -1.124 -0.521 BB_DC-3DT-2:DA2DG3_BB 10 4.990 -13.170 21.462 -1.556 4.812 2.008 32.128 B B -12 -11 5.915 B B 12 11 2.404 3.110 0.299 1.227 BB_DG-12DA-11:DT11DC12_BB 11 -16.905 32.149 27.246 1.808 -2.763 3.573 53.448 B B -11 -10 -11.543 B B 11 10 3.608 -10.290 -0.444 0.010 BB_DA-11DC-10:DG10DT11_BB 12 -8.146 9.137 51.927 0.736 -0.080 3.068 30.677 B B -10 -9 7.550 B B 10 9 3.145 3.983 0.375 -0.448 BB_DC-10DC-9:DG9DG10_BB 13 0.495 -0.939 30.419 -1.594 -0.615 3.873 39.938 B B -9 -8 8.042 B B 9 8 4.051 5.422 -0.301 -0.718 BB_DC-9DC-8:DG8DG9_BB 14 -10.106 14.991 38.320 -1.824 -1.000 2.342 26.628 B B -8 -7 19.747 B B 8 7 3.117 8.821 -1.095 -0.655 BB_DC-8DT-7:DA7DG8_BB 15 6.929 -15.511 24.189 -3.447 3.968 2.813 36.788 B B -7 -6 -1.530 B B 7 6 2.676 -0.960 0.994 -0.009 BB_DT-7DC-6:DG6DA7_BB 16 7.028 -11.201 36.121 0.097 -0.765 3.228 37.543 B B -6 -5 21.200 B B 6 5 3.548 13.364 -0.358 -0.270 BB_DC-6DC-5:DG5DG6_BB 17 0.879 -1.395 35.154 -2.291 0.679 3.409 28.838 B B -5 -4 15.784 B B 5 4 3.662 7.751 -0.438 -0.563 BB_DC-5DC-4:DG4DG5_BB 18 -3.275 6.670 27.607 -3.042 0.073 2.992 38.688 B B -4 -3 3.691 B B 4 3 2.990 2.443 1.037 -0.496 BB_DC-4DC-3:DG3DG4_BB 19 1.547 -2.337 38.584 -1.023 -1.392 2.977 22.034 B B -3 -2 1.350 B B 3 2 3.326 0.512 -1.124 -0.521 BB_DC-3DT-2:DA2DG3_BB 20 4.990 -13.170 21.462 -1.556 4.812 software software chem_comp_atom chem_comp_bond database_2 struct_ref_seq_dif struct_site repository Initial release Version format compliance Database references Refinement description Data collection Refinement description Data collection Database references Derived calculations 1 0 2011-06-15 1 1 2011-07-13 1 2 2011-07-20 1 3 2017-11-08 1 4 2019-07-17 1 5 2024-02-21 _software.classification _software.contact_author _software.contact_author_email _software.location _software.name _software.type _software.version _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2010-12-29 REL REL TAC TETRACYCLINE GOL GLYCEROL HOH water 23 bp promoter of Bmr efflux pump gene synthesized by IDT sample TAC 7101 3 TAC TAC 7101 A GOL 3968 4 GOL GOL 3968 A GOL 3968 4 GOL GOL 3968 B HOH 279 5 HOH HOH 279 A HOH 280 5 HOH HOH 280 A HOH 281 5 HOH HOH 281 A HOH 282 5 HOH HOH 282 A HOH 283 5 HOH HOH 283 A HOH 284 5 HOH HOH 284 A HOH 285 5 HOH HOH 285 A HOH 286 5 HOH HOH 286 A HOH 287 5 HOH HOH 287 A HOH 288 5 HOH HOH 288 A HOH 289 5 HOH HOH 289 A HOH 290 5 HOH HOH 290 A HOH 13 5 HOH HOH 13 B HOH 14 5 HOH HOH 14 B HOH 15 5 HOH HOH 15 B n 1 1 A LYS 2 n 2 LYS 2 A GLU 3 n 3 GLU 3 A SER 4 n 4 SER 4 A TYR 5 n 5 TYR 5 A TYR 6 n 6 TYR 6 A SER 7 n 7 SER 7 A ILE 8 n 8 ILE 8 A GLY 9 n 9 GLY 9 A GLU 10 n 10 GLU 10 A VAL 11 n 11 VAL 11 A SER 12 n 12 SER 12 A LYS 13 n 13 LYS 13 A LEU 14 n 14 LEU 14 A ALA 15 n 15 ALA 15 A ASN 16 n 16 ASN 16 A VAL 17 n 17 VAL 17 A SER 18 n 18 SER 18 A ILE 19 n 19 ILE 19 A LYS 20 n 20 LYS 20 A ALA 21 n 21 ALA 21 A LEU 22 n 22 LEU 22 A ARG 23 n 23 ARG 23 A TYR 24 n 24 TYR 24 A TYR 25 n 25 TYR 25 A ASP 26 n 26 ASP 26 A LYS 27 n 27 LYS 27 A ILE 28 n 28 ILE 28 A ASP 29 n 29 ASP 29 A LEU 30 n 30 LEU 30 A PHE 31 n 31 PHE 31 A LYS 32 n 32 LYS 32 A PRO 33 n 33 PRO 33 A ALA 34 n 34 ALA 34 A TYR 35 n 35 TYR 35 A VAL 36 n 36 VAL 36 A ASP 37 n 37 ASP 37 A PRO 38 n 38 PRO 38 A ASP 39 n 39 ASP 39 A THR 40 n 40 THR 40 A SER 41 n 41 SER 41 A TYR 42 n 42 TYR 42 A ARG 43 n 43 ARG 43 A TYR 44 n 44 TYR 44 A TYR 45 n 45 TYR 45 A THR 46 n 46 THR 46 A ASP 47 n 47 ASP 47 A SER 48 n 48 SER 48 A GLN 49 n 49 GLN 49 A LEU 50 n 50 LEU 50 A ILE 51 n 51 ILE 51 A HIS 52 n 52 HIS 52 A LEU 53 n 53 LEU 53 A ASP 54 n 54 ASP 54 A LEU 55 n 55 LEU 55 A ILE 56 n 56 ILE 56 A LYS 57 n 57 LYS 57 A SER 58 n 58 SER 58 A LEU 59 n 59 LEU 59 A LYS 60 n 60 LYS 60 A TYR 61 n 61 TYR 61 A ILE 62 n 62 ILE 62 A GLY 63 n 63 GLY 63 A THR 64 n 64 THR 64 A PRO 65 n 65 PRO 65 A LEU 66 n 66 LEU 66 A GLU 67 n 67 GLU 67 A GLU 68 n 68 GLU 68 A MET 69 n 69 MET 69 A LYS 70 n 70 LYS 70 A LYS 71 n 71 LYS 71 A ALA 72 n 72 ALA 72 A GLN 73 n 73 GLN 73 A ASP 74 n 74 ASP 74 A LEU 75 n 75 LEU 75 A GLU 76 n 76 GLU 76 A MET 77 n 77 MET 77 A GLU 78 n 78 GLU 78 A GLU 79 n 79 GLU 79 A LEU 80 n 80 LEU 80 A PHE 81 n 81 PHE 81 A ALA 82 n 82 ALA 82 A PHE 83 n 83 PHE 83 A TYR 84 n 84 TYR 84 A THR 85 n 85 THR 85 A GLU 86 n 86 GLU 86 A GLN 87 n 87 GLN 87 A GLU 88 n 88 GLU 88 A ARG 89 n 89 ARG 89 A GLN 90 n 90 GLN 90 A ILE 91 n 91 ILE 91 A ARG 92 n 92 ARG 92 A GLU 93 n 93 GLU 93 A LYS 94 n 94 LYS 94 A LEU 95 n 95 LEU 95 A ASP 96 n 96 ASP 96 A PHE 97 n 97 PHE 97 A LEU 98 n 98 LEU 98 A SER 99 n 99 SER 99 A ALA 100 n 100 ALA 100 A LEU 101 n 101 LEU 101 A GLU 102 n 102 GLU 102 A GLN 103 n 103 GLN 103 A THR 104 n 104 THR 104 A ILE 105 n 105 ILE 105 A SER 106 n 106 SER 106 A LEU 107 n 107 LEU 107 A VAL 108 n 108 VAL 108 A LYS 109 n 109 LYS 109 A LYS 110 n 110 LYS 110 A ARG 111 n 111 ARG 111 A MET 112 n 112 MET 112 A LYS 113 n 113 LYS 113 A ARG 114 n 114 ARG 114 A GLN 115 n 115 GLN 115 A MET 116 n 116 MET 116 A GLU 117 n 117 GLU 117 A TYR 118 n 118 TYR 118 A PRO 119 n 119 PRO 119 A ALA 120 n 120 ALA 120 A LEU 121 n 121 LEU 121 A GLY 122 n 122 GLY 122 A GLU 123 n 123 GLU 123 A VAL 124 n 124 VAL 124 A PHE 125 n 125 PHE 125 A VAL 126 n 126 VAL 126 A LEU 127 n 127 LEU 127 A ASP 128 n 128 ASP 128 A GLU 129 n 129 GLU 129 A GLU 130 n 130 GLU 130 A GLU 131 n 131 GLU 131 A ILE 132 n 132 ILE 132 A ARG 133 n 133 ARG 133 A ILE 134 n 134 ILE 134 A ILE 135 n 135 ILE 135 A GLN 136 n 136 GLN 136 A THR 137 n 137 THR 137 A GLU 138 n 138 GLU 138 A ALA 139 n 139 ALA 139 A GLU 140 n 140 GLU 140 A GLY 141 n 141 GLY 141 A LEU 142 n 142 LEU 142 A GLY 143 n 143 GLY 143 A PRO 144 n 144 PRO 144 A GLU 145 n 145 GLU 145 A ASN 146 n 146 ASN 146 A VAL 147 n 147 VAL 147 A LEU 148 n 148 LEU 148 A ASN 149 n 149 ASN 149 A ALA 150 n 150 ALA 150 A SER 151 n 151 SER 151 A TYR 152 n 152 TYR 152 A SER 153 n 153 SER 153 A LYS 154 n 154 LYS 154 A LEU 155 n 155 LEU 155 A LYS 156 n 156 LYS 156 A LYS 157 n 157 LYS 157 A PHE 158 n 158 PHE 158 A ILE 159 n 159 ILE 159 A GLU 160 n 160 GLU 160 A SER 161 n 161 SER 161 A ALA 162 n 162 ALA 162 A ASP 163 n 163 ASP 163 A GLY 164 n 164 GLY 164 A PHE 165 n 165 PHE 165 A THR 166 n 166 THR 166 A ASN 167 n 167 ASN 167 A ASN 168 n 168 ASN 168 A SER 169 n 169 SER 169 A TYR 170 n 170 TYR 170 A GLY 171 n 171 GLY 171 A ALA 172 n 172 ALA 172 A THR 173 n 173 THR 173 A PHE 174 n 174 PHE 174 A SER 175 n 175 SER 175 A PHE 176 n 176 PHE 176 A GLN 177 n 177 GLN 177 A PRO 178 n 178 PRO 178 A TYR 179 n 179 TYR 179 A THR 180 n 180 THR 180 A SER 181 n 181 SER 181 A ILE 182 n 182 ILE 182 A ASP 183 n 183 ASP 183 A GLU 184 n 184 GLU 184 A MET 185 n 185 MET 185 A THR 186 n 186 THR 186 A TYR 187 n 187 TYR 187 A ARG 188 n 188 ARG 188 A HIS 189 n 189 HIS 189 A ILE 190 n 190 ILE 190 A PHE 191 n 191 PHE 191 A THR 192 n 192 THR 192 A PRO 193 n 193 PRO 193 A VAL 194 n 194 VAL 194 A LEU 195 n 195 LEU 195 A THR 196 n 196 THR 196 A ASN 197 n 197 ASN 197 A LYS 198 n 198 LYS 198 A GLN 199 n 199 GLN 199 A ILE 200 n 200 ILE 200 A SER 201 n 201 SER 201 A SER 202 n 202 SER 202 A ILE 203 n 203 ILE 203 A THR 204 n 204 THR 204 A PRO 205 n 205 PRO 205 A ASP 206 n 206 ASP 206 A MET 207 n 207 MET 207 A GLU 208 n 208 GLU 208 A ILE 209 n 209 ILE 209 A THR 210 n 210 THR 210 A THR 211 n 211 THR 211 A ILE 212 n 212 ILE 212 A PRO 213 n 213 PRO 213 A LYS 214 n 214 LYS 214 A GLY 215 n 215 GLY 215 A ARG 216 n 216 ARG 216 A TYR 217 n 217 TYR 217 A ALA 218 n 218 ALA 218 A CYS 219 n 219 CYS 219 A ILE 220 n 220 ILE 220 A ALA 221 n 221 ALA 221 A TYR 222 n 222 TYR 222 A ASN 223 n 223 ASN 223 A PHE 224 n 224 PHE 224 A SER 225 n 225 SER 225 A PRO 226 n 226 PRO 226 A GLU 227 n 227 GLU 227 A HIS 228 n 228 HIS 228 A TYR 229 n 229 TYR 229 A PHE 230 n 230 PHE 230 A LEU 231 n 231 LEU 231 A ASN 232 n 232 ASN 232 A LEU 233 n 233 LEU 233 A GLN 234 n 234 GLN 234 A LYS 235 n 235 LYS 235 A LEU 236 n 236 LEU 236 A ILE 237 n 237 ILE 237 A LYS 238 n 238 LYS 238 A TYR 239 n 239 TYR 239 A ILE 240 n 240 ILE 240 A ALA 241 n 241 ALA 241 A ASP 242 n 242 ASP 242 A ARG 243 n 243 ARG 243 A GLN 244 n 244 GLN 244 A LEU 245 n 245 LEU 245 A THR 246 n 246 THR 246 A VAL 247 n 247 VAL 247 A VAL 248 n 248 VAL 248 A SER 249 n 249 SER 249 A ASP 250 n 250 ASP 250 A VAL 251 n 251 VAL 251 A TYR 252 n 252 TYR 252 A GLU 253 n 253 GLU 253 A LEU 254 n 254 LEU 254 A ILE 255 n 255 ILE 255 A ILE 256 n 256 ILE 256 A PRO 257 n 257 PRO 257 A ILE 258 n 258 ILE 258 A HIS 259 n 259 HIS 259 A TYR 260 n 260 TYR 260 A SER 261 n 261 SER 261 A PRO 262 n 262 PRO 262 A LYS 263 n 263 LYS 263 A LYS 264 n 264 LYS 264 A GLN 265 n 265 GLN 265 A GLU 266 n 266 GLU 266 A GLU 267 n 267 GLU 267 A TYR 268 n 268 TYR 268 A ARG 269 n 269 ARG 269 A VAL 270 n 270 VAL 270 A GLU 271 n 271 GLU 271 A MET 272 n 272 MET 272 A LYS 273 n 273 LYS 273 A ILE 274 n 274 ILE 274 A ARG 275 n 275 ARG 275 A ILE 276 n 276 ILE 276 A LEU 277 n 277 LEU 277 A n 278 278 A DG -12 n 1 DG -12 B DA -11 n 2 DA -11 B DC -10 n 3 DC -10 B DC -9 n 4 DC -9 B DC -8 n 5 DC -8 B DT -7 n 6 DT -7 B DC -6 n 7 DC -6 B DC -5 n 8 DC -5 B DC -4 n 9 DC -4 B DC -3 n 10 DC -3 B DT -2 n 11 DT -2 B DT 1 n 12 DT 1 B DA 2 n 13 DA 2 B DG 3 n 14 DG 3 B DG 4 n 15 DG 4 B DG 5 n 16 DG 5 B DG 6 n 17 DG 6 B DA 7 n 18 DA 7 B DG 8 n 19 DG 8 B DG 9 n 20 DG 9 B DG 10 n 21 DG 10 B DT 11 n 22 DT 11 B DC 12 n 23 DC 12 B 0.8681 0.1735 -0.5031 0.3420 0.1701 0.7083 -0.0171 0.2031 0.0539 -0.0244 -0.0897 -0.0608 0.1037 -0.2545 0.0000 0.4923 0.0437 -0.0148 0.4824 -0.0509 0.4866 refined 48.5248 -12.9632 19.1546 X-RAY DIFFRACTION 0.1357 -0.0780 0.1303 -0.0065 0.1343 0.0925 -0.3006 -0.1893 -0.0943 -0.1729 -0.3140 0.1459 -1.1817 -0.5104 -0.0029 0.7833 0.0662 -0.0814 0.5160 -0.1048 0.7344 refined 68.4604 5.9940 45.2954 X-RAY DIFFRACTION 0.0011 0.0204 0.0043 0.1764 0.0533 0.0263 -0.2676 0.2144 -0.8796 0.3567 0.1446 0.5618 0.0064 -0.9392 0.0037 0.5201 -0.0866 0.0851 0.4524 -0.1351 0.7378 refined 61.5673 19.4653 49.4384 X-RAY DIFFRACTION 0.5218 0.9007 -0.1252 1.1362 0.2682 0.8252 0.1061 -0.1575 -0.1312 0.0929 -0.2282 -0.0179 0.0628 0.1745 0.0001 0.4999 0.0153 -0.0110 0.5593 -0.0007 0.4567 refined 69.3650 23.9701 65.1139 X-RAY DIFFRACTION 0.2301 0.1823 -0.1469 0.0316 -0.0349 0.1205 0.4540 -0.5160 0.0350 0.5930 -0.8625 0.1623 0.5335 -0.8542 0.0015 0.8039 -0.0838 0.0002 0.7904 -0.2635 0.7901 refined 34.7810 -16.0003 33.0795 X-RAY DIFFRACTION 0.2922 0.0382 0.2273 0.0277 0.0570 0.1003 0.6795 0.3109 1.0704 -0.7936 -0.8931 -0.8204 0.1448 -0.6099 0.0011 0.6692 0.2556 -0.1766 1.0332 -0.2553 0.7253 refined 33.8259 18.3120 40.6257 X-RAY DIFFRACTION X-RAY DIFFRACTION 1 (chain A and resid 2:87) X-RAY DIFFRACTION 2 (chain A and resid 88:116) X-RAY DIFFRACTION 3 (chain A and resid 152:169) X-RAY DIFFRACTION 4 (chain A and resid 170:277) X-RAY DIFFRACTION 5 (chain B and resid -12:1) X-RAY DIFFRACTION 6 (chain B and resid 2:12) author_and_software_defined_assembly PISA 4 tetrameric 13560 -106 32680 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 6_555 x,-y,-z+1/2 crystal symmetry operation 0.0000000000 0.0000000000 73.0825000000 A N TYR 6 A N TYR 6 A O TYR 45 A O TYR 45 A O TYR 44 A O TYR 44 A N TYR 35 A N TYR 35 A N PHE 125 A N PHE 125 A O CYS 219 A O CYS 219 A N TYR 222 A N TYR 222 A O VAL 270 A O VAL 270 A O LYS 273 A O LYS 273 A N TYR 252 A N TYR 252 A O VAL 251 A O VAL 251 A N PHE 174 A N PHE 174 A N THR 173 A N THR 173 A O HIS 189 A O HIS 189 A O ARG 188 A O ARG 188 A N ALA 139 A N ALA 139 A N ILE 132 A N ILE 132 A O ILE 212 A O ILE 212 1 A CG LYS 13 A CG LYS 13 1 Y 1 A CD LYS 13 A CD LYS 13 1 Y 1 A CE LYS 13 A CE LYS 13 1 Y 1 A NZ LYS 13 A NZ LYS 13 1 Y 1 A CG LYS 20 A CG LYS 20 1 Y 1 A CD LYS 20 A CD LYS 20 1 Y 1 A CE LYS 20 A CE LYS 20 1 Y 1 A NZ LYS 20 A NZ LYS 20 1 Y 1 A CG LYS 27 A CG LYS 27 1 Y 1 A CD LYS 27 A CD LYS 27 1 Y 1 A CE LYS 27 A CE LYS 27 1 Y 1 A NZ LYS 27 A NZ LYS 27 1 Y 1 A CG LYS 71 A CG LYS 71 1 Y 1 A CD LYS 71 A CD LYS 71 1 Y 1 A CE LYS 71 A CE LYS 71 1 Y 1 A NZ LYS 71 A NZ LYS 71 1 Y 1 A CG GLU 76 A CG GLU 76 1 Y 1 A CD GLU 76 A CD GLU 76 1 Y 1 A OE1 GLU 76 A OE1 GLU 76 1 Y 1 A OE2 GLU 76 A OE2 GLU 76 1 Y 1 A CG GLU 78 A CG GLU 78 1 Y 1 A CD GLU 78 A CD GLU 78 1 Y 1 A OE1 GLU 78 A OE1 GLU 78 1 Y 1 A OE2 GLU 78 A OE2 GLU 78 1 Y 1 A CG ARG 92 A CG ARG 92 1 Y 1 A CD ARG 92 A CD ARG 92 1 Y 1 A NE ARG 92 A NE ARG 92 1 Y 1 A CZ ARG 92 A CZ ARG 92 1 Y 1 A NH1 ARG 92 A NH1 ARG 92 1 Y 1 A NH2 ARG 92 A NH2 ARG 92 1 Y 1 A CG GLU 93 A CG GLU 93 1 Y 1 A CD GLU 93 A CD GLU 93 1 Y 1 A OE1 GLU 93 A OE1 GLU 93 1 Y 1 A OE2 GLU 93 A OE2 GLU 93 1 Y 1 A OG SER 99 A OG SER 99 1 Y 1 A CG LYS 110 A CG LYS 110 1 Y 1 A CD LYS 110 A CD LYS 110 1 Y 1 A CE LYS 110 A CE LYS 110 1 Y 1 A NZ LYS 110 A NZ LYS 110 1 Y 1 A CG TYR 118 A CG TYR 118 1 Y 1 A CD1 TYR 118 A CD1 TYR 118 1 Y 1 A CD2 TYR 118 A CD2 TYR 118 1 Y 1 A CE1 TYR 118 A CE1 TYR 118 1 Y 1 A CE2 TYR 118 A CE2 TYR 118 1 Y 1 A CZ TYR 118 A CZ TYR 118 1 Y 1 A OH TYR 118 A OH TYR 118 1 Y 1 A CG GLU 123 A CG GLU 123 1 Y 1 A CD GLU 123 A CD GLU 123 1 Y 1 A OE1 GLU 123 A OE1 GLU 123 1 Y 1 A OE2 GLU 123 A OE2 GLU 123 1 Y 1 A CG PHE 125 A CG PHE 125 1 Y 1 A CD1 PHE 125 A CD1 PHE 125 1 Y 1 A CD2 PHE 125 A CD2 PHE 125 1 Y 1 A CE1 PHE 125 A CE1 PHE 125 1 Y 1 A CE2 PHE 125 A CE2 PHE 125 1 Y 1 A CZ PHE 125 A CZ PHE 125 1 Y 1 A CG LYS 154 A CG LYS 154 1 Y 1 A CD LYS 154 A CD LYS 154 1 Y 1 A CE LYS 154 A CE LYS 154 1 Y 1 A NZ LYS 154 A NZ LYS 154 1 Y 1 A CG LYS 198 A CG LYS 198 1 Y 1 A CD LYS 198 A CD LYS 198 1 Y 1 A CE LYS 198 A CE LYS 198 1 Y 1 A NZ LYS 198 A NZ LYS 198 1 Y 1 A CG1 ILE 200 A CG1 ILE 200 1 Y 1 A CG2 ILE 200 A CG2 ILE 200 1 Y 1 A CD1 ILE 200 A CD1 ILE 200 1 Y 1 A CG LYS 263 A CG LYS 263 1 Y 1 A CD LYS 263 A CD LYS 263 1 Y 1 A CE LYS 263 A CE LYS 263 1 Y 1 A NZ LYS 263 A NZ LYS 263 1 Y 1 A CG LYS 264 A CG LYS 264 1 Y 1 A CD LYS 264 A CD LYS 264 1 Y 1 A CE LYS 264 A CE LYS 264 1 Y 1 A NZ LYS 264 A NZ LYS 264 1 Y 1 A CG GLU 266 A CG GLU 266 1 Y 1 A CD GLU 266 A CD GLU 266 1 Y 1 A OE1 GLU 266 A OE1 GLU 266 1 Y 1 A OE2 GLU 266 A OE2 GLU 266 1 Y 1 A CG LEU 277 A CG LEU 277 1 Y 1 A CD1 LEU 277 A CD1 LEU 277 1 Y 1 A CD2 LEU 277 A CD2 LEU 277 1 Y 1 A MET 1 A MET 1 1 Y 1 A ASP 278 A ASP 278 1 Y 1 11.21 1.50 110.50 121.71 A A A N CA CB SER SER SER 202 202 202 N 1 5.44 0.30 108.30 113.74 B B B O4' C1' N1 DC DC DC -10 -10 -10 N 1 5.82 0.30 108.30 114.12 B B B O4' C1' N1 DC DC DC -9 -9 -9 N 1 2.65 0.30 108.30 110.95 B B B O4' C1' N1 DT DT DT -7 -7 -7 N 1 6.81 0.30 108.30 115.11 B B B O4' C1' N1 DC DC DC -3 -3 -3 N 1 -5.74 0.40 104.50 98.76 B B B O4' C4' C3' DT DT DT -2 -2 -2 N 1 3.11 0.30 108.30 111.41 B B B O4' C1' N1 DT DT DT -2 -2 -2 N 1 -3.31 0.40 104.50 101.19 B B B O4' C4' C3' DT DT DT 1 1 1 N 1 -6.27 0.80 102.40 96.13 B B B C3' C2' C1' DA DA DA 2 2 2 N 1 3.32 0.30 108.30 111.62 B B B O4' C1' N9 DG DG DG 3 3 3 N 1 -4.60 0.70 108.00 103.40 B B B O4' C1' N9 DG DG DG 4 4 4 N 1 -4.30 0.70 102.20 97.90 B B B C4' C3' C2' DG DG DG 5 5 5 N 1 3.23 0.30 108.30 111.53 B B B O4' C1' N9 DG DG DG 5 5 5 N 1 5.36 0.30 108.30 113.66 B B B O4' C1' N9 DG DG DG 6 6 6 N 1 2.65 0.30 108.30 110.95 B B B O4' C1' N9 DG DG DG 8 8 8 N 1 2.29 0.30 108.30 110.59 B B B O4' C1' N9 DG DG DG 9 9 9 N 1 A A CD N PRO PRO 33 33 -0.087 0.014 1.474 1.387 N 1 B B O3' C3' DC DC -8 -8 -0.038 0.006 1.419 1.381 N 1 A SER 41 54.82 16.32 1 A ASN 168 -166.41 -160.12 0.1145 0.0000 0.0000 0.1145 -0.0000 -0.2291 0.9050 0.8950 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : RESIDUAL ONLY 0.2623 0.2163 0.2186 2.942 43.084 775 15979 4.85 86.09 1.000 1.000 0.41 0.5950 1 1.00 MOLECULAR REPLACEMENT 29.23 0.83 1.10 ML FLAT BULK SOLVENT MODEL 55.039 0.355 2.942 43.084 15 2727 44 468 2200 0.017 2930 1.391 3926 22.694 1077 0.079 445 0.005 421 0.5431 0.3679 3.1265 72 1637 56.00 0.2914 0.2952 3.3679 139 2347 82.00 0.3297 0.2674 3.7066 131 2563 89.00 0.2410 0.2028 4.2426 120 2714 92.00 0.1874 0.1656 5.3436 127 2908 98.00 0.2615 0.2070 43.0884 186 3035 98.00 2.942 50.000 3Q5P 17789 1 95.800 2.950 3.060 1 68.200 3.060 3.180 1 92.100 3.180 3.320 1 99.500 3.320 3.500 1 100.000 3.500 3.720 1 100.000 3.720 4.000 1 99.800 4.000 4.410 1 99.800 4.410 5.040 1 99.800 5.040 6.350 1 99.500 6.350 50.000 1 98.500 refinement PHENIX 1.6.4_486 data scaling Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ SCALEPACK package refinement Garib N. Murshudov garib@ysbl.york.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/refmac5.html REFMAC program data extraction PDB deposit@deposit.rcsb.org June 10, 2010 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.10 data collection MAR345dtb phasing REFMAC data reduction Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ DENZO package Crystal structure of BmrR bound to Tetracycline 1 N N 2 N N 3 N N 4 N N 4 N N 5 N N 5 N N A ILE 8 A ILE 8 HELX_P A ASN 16 A ASN 16 1 1 9 A SER 18 A SER 18 HELX_P A ILE 28 A ILE 28 1 2 11 A ASP 47 A ASP 47 HELX_P A LEU 50 A LEU 50 5 3 4 A ILE 51 A ILE 51 HELX_P A GLY 63 A GLY 63 1 4 13 A PRO 65 A PRO 65 HELX_P A ASP 74 A ASP 74 1 5 10 A GLU 76 A GLU 76 HELX_P A MET 116 A MET 116 1 6 41 A LEU 148 A LEU 148 HELX_P A SER 151 A SER 151 5 7 4 A TYR 152 A TYR 152 HELX_P A GLY 164 A GLY 164 1 8 13 A SER 181 A SER 181 HELX_P A MET 185 A MET 185 5 9 5 A SER 225 A SER 225 HELX_P A GLN 244 A GLN 244 1 10 20 hydrog DG-DC PAIR B DG -12 B N1 DG 1 1_555 B DC 12 B N3 DC 23 6_555 hydrog DA-DT PAIR B DA -11 B N1 DA 2 1_555 B DT 11 B N3 DT 22 6_555 hydrog WATSON-CRICK B DC -10 B N3 DC 3 1_555 B DG 10 B N1 DG 21 6_555 hydrog WATSON-CRICK B DC -10 B N4 DC 3 1_555 B DG 10 B O6 DG 21 6_555 hydrog WATSON-CRICK B DC -10 B O2 DC 3 1_555 B DG 10 B N2 DG 21 6_555 hydrog WATSON-CRICK B DC -9 B N3 DC 4 1_555 B DG 9 B N1 DG 20 6_555 hydrog WATSON-CRICK B DC -9 B N4 DC 4 1_555 B DG 9 B O6 DG 20 6_555 hydrog WATSON-CRICK B DC -9 B O2 DC 4 1_555 B DG 9 B N2 DG 20 6_555 hydrog WATSON-CRICK B DC -8 B N3 DC 5 1_555 B DG 8 B N1 DG 19 6_555 hydrog WATSON-CRICK B DC -8 B N4 DC 5 1_555 B DG 8 B O6 DG 19 6_555 hydrog WATSON-CRICK B DC -8 B O2 DC 5 1_555 B DG 8 B N2 DG 19 6_555 hydrog WATSON-CRICK B DT -7 B N3 DT 6 1_555 B DA 7 B N1 DA 18 6_555 hydrog WATSON-CRICK B DT -7 B O4 DT 6 1_555 B DA 7 B N6 DA 18 6_555 hydrog WATSON-CRICK B DC -6 B N3 DC 7 1_555 B DG 6 B N1 DG 17 6_555 hydrog WATSON-CRICK B DC -6 B N4 DC 7 1_555 B DG 6 B O6 DG 17 6_555 hydrog WATSON-CRICK B DC -6 B O2 DC 7 1_555 B DG 6 B N2 DG 17 6_555 hydrog WATSON-CRICK B DC -5 B N3 DC 8 1_555 B DG 5 B N1 DG 16 6_555 hydrog WATSON-CRICK B DC -5 B N4 DC 8 1_555 B DG 5 B O6 DG 16 6_555 hydrog WATSON-CRICK B DC -5 B O2 DC 8 1_555 B DG 5 B N2 DG 16 6_555 hydrog WATSON-CRICK B DC -4 B N3 DC 9 1_555 B DG 4 B N1 DG 15 6_555 hydrog WATSON-CRICK B DC -4 B N4 DC 9 1_555 B DG 4 B O6 DG 15 6_555 hydrog WATSON-CRICK B DC -4 B O2 DC 9 1_555 B DG 4 B N2 DG 15 6_555 hydrog WATSON-CRICK B DC -3 B N3 DC 10 1_555 B DG 3 B N1 DG 14 6_555 hydrog WATSON-CRICK B DC -3 B N4 DC 10 1_555 B DG 3 B O6 DG 14 6_555 hydrog WATSON-CRICK B DC -3 B O2 DC 10 1_555 B DG 3 B N2 DG 14 6_555 hydrog WATSON-CRICK B DT -2 B N3 DT 11 1_555 B DA 2 B N1 DA 13 6_555 hydrog WATSON-CRICK B DT -2 B O4 DT 11 1_555 B DA 2 B N6 DA 13 6_555 hydrog DT-DG MISPAIR B DT -2 B O2 DT 11 1_555 B DG 3 B N2 DG 14 6_555 hydrog WATSON-CRICK B DA 2 B N1 DA 13 1_555 B DT -2 B N3 DT 11 6_555 hydrog WATSON-CRICK B DA 2 B N6 DA 13 1_555 B DT -2 B O4 DT 11 6_555 hydrog WATSON-CRICK B DG 3 B N1 DG 14 1_555 B DC -3 B N3 DC 10 6_555 hydrog WATSON-CRICK B DG 3 B N2 DG 14 1_555 B DC -3 B O2 DC 10 6_555 hydrog WATSON-CRICK B DG 3 B O6 DG 14 1_555 B DC -3 B N4 DC 10 6_555 hydrog DG-DT MISPAIR B DG 3 B N2 DG 14 1_555 B DT -2 B O2 DT 11 6_555 hydrog WATSON-CRICK B DG 4 B N1 DG 15 1_555 B DC -4 B N3 DC 9 6_555 hydrog WATSON-CRICK B DG 4 B N2 DG 15 1_555 B DC -4 B O2 DC 9 6_555 hydrog WATSON-CRICK B DG 4 B O6 DG 15 1_555 B DC -4 B N4 DC 9 6_555 hydrog WATSON-CRICK B DG 5 B N1 DG 16 1_555 B DC -5 B N3 DC 8 6_555 hydrog WATSON-CRICK B DG 5 B N2 DG 16 1_555 B DC -5 B O2 DC 8 6_555 hydrog WATSON-CRICK B DG 5 B O6 DG 16 1_555 B DC -5 B N4 DC 8 6_555 hydrog WATSON-CRICK B DG 6 B N1 DG 17 1_555 B DC -6 B N3 DC 7 6_555 hydrog WATSON-CRICK B DG 6 B N2 DG 17 1_555 B DC -6 B O2 DC 7 6_555 hydrog WATSON-CRICK B DG 6 B O6 DG 17 1_555 B DC -6 B N4 DC 7 6_555 hydrog WATSON-CRICK B DA 7 B N1 DA 18 1_555 B DT -7 B N3 DT 6 6_555 hydrog WATSON-CRICK B DA 7 B N6 DA 18 1_555 B DT -7 B O4 DT 6 6_555 hydrog WATSON-CRICK B DG 8 B N1 DG 19 1_555 B DC -8 B N3 DC 5 6_555 hydrog WATSON-CRICK B DG 8 B N2 DG 19 1_555 B DC -8 B O2 DC 5 6_555 hydrog WATSON-CRICK B DG 8 B O6 DG 19 1_555 B DC -8 B N4 DC 5 6_555 hydrog WATSON-CRICK B DG 9 B N1 DG 20 1_555 B DC -9 B N3 DC 4 6_555 hydrog WATSON-CRICK B DG 9 B N2 DG 20 1_555 B DC -9 B O2 DC 4 6_555 hydrog WATSON-CRICK B DG 9 B O6 DG 20 1_555 B DC -9 B N4 DC 4 6_555 hydrog WATSON-CRICK B DG 10 B N1 DG 21 1_555 B DC -10 B N3 DC 3 6_555 hydrog WATSON-CRICK B DG 10 B N2 DG 21 1_555 B DC -10 B O2 DC 3 6_555 hydrog WATSON-CRICK B DG 10 B O6 DG 21 1_555 B DC -10 B N4 DC 3 6_555 hydrog DT-DA PAIR B DT 11 B N3 DT 22 1_555 B DA -11 B N1 DA 2 6_555 hydrog DC-DG PAIR B DC 12 B N4 DC 23 1_555 B DG -12 B O6 DG 1 6_555 TRANSCRIPTION/DNA/ANTIBIOTIC multidrug binding, multidrug resistance, Transcription regulator, TRANSCRIPTION-DNA-ANTIBIOTIC complex BMRR_BACSU UNP 1 1 P39075 MKESYYSIGEVSKLANVSIKALRYYDKIDLFKPAYVDPDTSYRYYTDSQLIHLDLIKSLKYIGTPLEEMKKAQDLEMEEL FAFYTEQERQIREKLDFLSALEQTISLVKKRMKRQMEYPALGEVFVLDEEEIRIIQTEAEGIGPENVLNASYSKLKKFIE SADGFTNNSYGATFSFQPYTSIDEMTYRHIFTPVLTNKQISSITPDMEITTIPKGRYACIAYNFSPEHYFLNLQKLIKYI ADRQLTVVSDVYELIIPIHYSPKKQEEYRVEMKIRIAE 3Q5P PDB 2 1 3Q5P GACCCTCCCCTTAGGGGAGGGTC 1 278 3Q5P 1 278 P39075 A 1 1 278 -12 12 3Q5P -12 12 3Q5P B 2 1 23 1 ILE conflict LEU 142 3Q5P A P39075 UNP 142 142 1 ALA conflict LEU 277 3Q5P A P39075 UNP 277 277 1 GLU conflict ASP 278 3Q5P A P39075 UNP 278 278 3 8 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A TYR 6 A TYR 6 A SER 7 A SER 7 A ARG 43 A ARG 43 A TYR 45 A TYR 45 A TYR 35 A TYR 35 A VAL 36 A VAL 36 A VAL 124 A VAL 124 A GLU 129 A GLU 129 A GLY 215 A GLY 215 A ASN 223 A ASN 223 A TYR 268 A TYR 268 A ILE 276 A ILE 276 A VAL 251 A VAL 251 A PRO 257 A PRO 257 A TYR 170 A TYR 170 A PHE 174 A PHE 174 A TYR 187 A TYR 187 A PRO 193 A PRO 193 A ILE 132 A ILE 132 A LEU 142 A LEU 142 A MET 207 A MET 207 A ILE 212 A ILE 212 BINDING SITE FOR RESIDUE TAC A 7101 A TAC 7101 Software 12 BINDING SITE FOR RESIDUE GOL A 3968 A GOL 3968 Software 6 BINDING SITE FOR RESIDUE GOL B 3968 B GOL 3968 Software 2 A ILE 51 A ILE 51 12 6_555 A PRO 144 A PRO 144 12 1_555 A VAL 147 A VAL 147 12 1_555 A ASN 149 A ASN 149 12 1_555 A TYR 152 A TYR 152 12 1_555 A ILE 182 A ILE 182 12 1_555 A TYR 187 A TYR 187 12 1_555 A PHE 224 A PHE 224 12 1_555 A TYR 229 A TYR 229 12 1_555 A GLU 253 A GLU 253 12 1_555 A ILE 255 A ILE 255 12 1_555 A TYR 268 A TYR 268 12 1_555 A GLU 131 A GLU 131 6 1_555 A ARG 133 A ARG 133 6 1_555 A VAL 194 A VAL 194 6 1_555 A LEU 195 A LEU 195 6 1_555 A THR 196 A THR 196 6 1_555 A ASN 197 A ASN 197 6 1_555 B DG -12 B DG 1 2 1_555 B HOH 13 G HOH 2 1_555 95 P 43 2 2