0.025888
0.014946
0.000000
0.000000
0.029893
0.000000
0.000000
0.000000
0.006517
0.00000
0.00000
0.00000
Sasson, Y.
Navon-Perry, L.
Hirsch, J.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
38.628
38.628
153.456
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C10 H17 N6 O13 P3
522.196
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
P
N
138
N
O
N
139
N
O
N
140
N
O
N
141
N
N
N
142
R
P
N
143
N
O
N
144
N
O
N
145
N
O
N
146
S
P
N
147
N
O
N
148
N
O
N
149
N
O
N
150
N
C
N
151
R
C
N
152
N
O
N
153
S
C
N
154
N
O
N
155
R
C
N
156
N
O
N
157
R
C
Y
158
N
N
Y
159
N
C
Y
160
N
N
Y
161
N
C
Y
162
N
C
N
163
N
O
Y
164
N
N
Y
165
N
C
N
166
N
N
Y
167
N
N
Y
168
N
C
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
N
N
187
S
C
N
188
N
C
N
189
N
O
N
190
N
C
Y
191
N
C
Y
192
N
N
Y
193
N
C
Y
194
N
C
Y
195
N
N
N
196
N
O
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
O
N
208
N
H
N
209
N
H
N
210
N
N
N
211
S
C
N
212
N
C
N
213
N
O
N
214
S
C
N
215
N
C
N
216
N
C
N
217
N
C
N
218
N
O
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
N
N
233
S
C
N
234
N
C
N
235
N
O
N
236
N
C
N
237
N
C
N
238
N
C
N
239
N
C
N
240
N
O
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
N
N
255
S
C
N
256
N
C
N
257
N
O
N
258
N
C
N
259
N
C
N
260
N
C
N
261
N
C
N
262
N
N
N
263
N
O
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
N
N
280
S
C
N
281
N
C
N
282
N
O
N
283
N
C
N
284
N
C
N
285
N
S
N
286
N
C
N
287
N
O
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
MG
N
300
N
N
N
301
S
C
N
302
N
C
N
303
N
O
N
304
N
C
Y
305
N
C
Y
306
N
C
Y
307
N
C
Y
308
N
C
Y
309
N
C
Y
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
N
N
324
S
C
N
325
N
C
N
326
N
O
N
327
N
C
N
328
N
C
N
329
N
C
N
330
N
O
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
N
N
341
S
C
N
342
N
C
N
343
N
O
N
344
N
C
N
345
N
O
N
346
N
O
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
N
N
355
S
C
N
356
N
C
N
357
N
O
N
358
R
C
N
359
N
O
N
360
N
C
N
361
N
O
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
N
N
372
S
C
N
373
N
C
N
374
N
O
N
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
C
Y
379
N
N
Y
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
C
N
385
N
O
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
N
N
399
S
C
N
400
N
C
N
401
N
O
N
402
N
C
Y
403
N
C
Y
404
N
C
Y
405
N
C
Y
406
N
C
Y
407
N
C
Y
408
N
C
N
409
N
O
N
410
N
O
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
N
N
423
S
C
N
424
N
C
N
425
N
O
N
426
N
C
N
427
N
C
N
428
N
C
N
429
N
O
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
doub
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
Y
164
N
sing
Y
165
N
sing
Y
166
N
doub
N
167
N
sing
Y
168
N
sing
Y
169
N
sing
Y
170
N
doub
N
171
N
doub
Y
172
N
sing
Y
173
N
sing
N
174
N
sing
N
175
N
sing
Y
176
N
doub
N
177
N
sing
N
178
N
sing
Y
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
Y
191
N
sing
Y
192
N
doub
Y
193
N
doub
N
194
N
sing
Y
195
N
sing
N
196
N
sing
Y
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
doub
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
Y
299
N
doub
Y
300
N
sing
Y
301
N
sing
N
302
N
sing
Y
303
N
doub
N
304
N
sing
Y
305
N
doub
N
306
N
sing
Y
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
doub
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
doub
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
doub
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
doub
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
Y
368
N
doub
Y
369
N
sing
Y
370
N
sing
N
371
N
sing
Y
372
N
doub
Y
373
N
sing
Y
374
N
sing
N
375
N
sing
Y
376
N
sing
Y
377
N
doub
N
378
N
sing
Y
379
N
doub
N
380
N
sing
Y
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
doub
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
Y
396
N
doub
Y
397
N
sing
Y
398
N
sing
N
399
N
sing
Y
400
N
doub
N
401
N
sing
Y
402
N
doub
N
403
N
sing
Y
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
doub
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
413
372
389
10.1016/j.jmb.2011.08.017
21903096
RGK Family G-Domain:GTP Analog Complex Structures and Nucleotide-Binding Properties.
2011
10.2210/pdb3q7p/pdb
pdb_00003q7p
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
110
1
CCD
2008-11-20
ADSC QUANTUM 4
SINGLE WAVELENGTH
M
x-ray
1
0.934
1.0
ID14-2
ESRF
0.934
SYNCHROTRON
ESRF BEAMLINE ID14-2
18231.715
GTP-binding protein RAD
G-domain, residues 90-255
2
man
polymer
522.196
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
2
syn
non-polymer
24.305
MAGNESIUM ION
2
syn
non-polymer
18.015
water
31
nat
water
RAD1, Ras associated with diabetes
no
no
SVYKVLLLGAPGVGKSALARIFGGVEDGPEAEAAGHTYDRSIVVDGEEASLMVYDIWEQDGGRWLPGHCMAMGDAYVIVY
SVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLVRSREVSVDEGRACAVVFDCKFIETSAALHHNVQALFEGVVR
QIRLRR
SVYKVLLLGAPGVGKSALARIFGGVEDGPEAEAAGHTYDRSIVVDGEEASLMVYDIWEQDGGRWLPGHCMAMGDAYVIVY
SVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLVRSREVSVDEGRACAVVFDCKFIETSAALHHNVQALFEGVVR
QIRLRR
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
RRAD, RAD
9606
Homo sapiens
562
Escherichia coli
Plasmid
pET21d
2
1.81
32.15
VAPOR DIFFUSION, SITTING DROP
5.7
25% PEG 400, 5% ethylene glycol 0.1M MES, 0.2M calcium acetate,, pH 5.7, VAPOR DIFFUSION, SITTING DROP, temperature 292K
292
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Database references
Data collection
Database references
Derived calculations
Refinement description
1
0
2011-09-21
1
1
2011-10-26
1
2
2023-09-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2011-01-05
REL
REL
GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
MG
MAGNESIUM ION
HOH
water
2DPX
PDB:2DPX
PDB
experimental model
GNP
179
2
GNP
GNP
256
A
MG
180
3
MG
MG
257
A
GNP
179
2
GNP
GNP
256
B
MG
180
3
MG
MG
257
B
HOH
1
4
HOH
HOH
1
A
HOH
3
4
HOH
HOH
3
A
HOH
6
4
HOH
HOH
6
A
HOH
7
4
HOH
HOH
7
A
HOH
10
4
HOH
HOH
10
A
HOH
11
4
HOH
HOH
11
A
HOH
12
4
HOH
HOH
12
A
HOH
16
4
HOH
HOH
16
A
HOH
17
4
HOH
HOH
17
A
HOH
19
4
HOH
HOH
19
A
HOH
21
4
HOH
HOH
21
A
HOH
23
4
HOH
HOH
23
A
HOH
24
4
HOH
HOH
24
A
HOH
26
4
HOH
HOH
26
A
HOH
28
4
HOH
HOH
28
A
HOH
29
4
HOH
HOH
29
A
HOH
2
4
HOH
HOH
2
B
HOH
4
4
HOH
HOH
4
B
HOH
5
4
HOH
HOH
5
B
HOH
8
4
HOH
HOH
8
B
HOH
9
4
HOH
HOH
9
B
HOH
13
4
HOH
HOH
13
B
HOH
15
4
HOH
HOH
15
B
HOH
18
4
HOH
HOH
18
B
HOH
20
4
HOH
HOH
20
B
HOH
22
4
HOH
HOH
22
B
HOH
25
4
HOH
HOH
25
B
HOH
27
4
HOH
HOH
27
B
HOH
30
4
HOH
HOH
30
B
HOH
31
4
HOH
HOH
31
B
HOH
32
4
HOH
HOH
32
B
SER
90
n
1
SER
90
A
VAL
91
n
2
VAL
91
A
TYR
92
n
3
TYR
92
A
LYS
93
n
4
LYS
93
A
VAL
94
n
5
VAL
94
A
LEU
95
n
6
LEU
95
A
LEU
96
n
7
LEU
96
A
LEU
97
n
8
LEU
97
A
GLY
98
n
9
GLY
98
A
ALA
99
n
10
ALA
99
A
PRO
100
n
11
PRO
100
A
GLY
101
n
12
GLY
101
A
VAL
102
n
13
VAL
102
A
GLY
103
n
14
GLY
103
A
LYS
104
n
15
LYS
104
A
SER
105
n
16
SER
105
A
ALA
106
n
17
ALA
106
A
LEU
107
n
18
LEU
107
A
ALA
108
n
19
ALA
108
A
ARG
109
n
20
ARG
109
A
ILE
110
n
21
ILE
110
A
PHE
111
n
22
PHE
111
A
GLY
112
n
23
GLY
112
A
GLY
113
n
24
GLY
113
A
n
25
114
A
n
26
115
A
n
27
116
A
n
28
117
A
n
29
118
A
n
30
119
A
n
31
120
A
n
32
121
A
n
33
122
A
n
34
123
A
n
35
124
A
HIS
125
n
36
HIS
125
A
THR
126
n
37
THR
126
A
TYR
127
n
38
TYR
127
A
ASP
128
n
39
ASP
128
A
ARG
129
n
40
ARG
129
A
SER
130
n
41
SER
130
A
ILE
131
n
42
ILE
131
A
VAL
132
n
43
VAL
132
A
VAL
133
n
44
VAL
133
A
ASP
134
n
45
ASP
134
A
GLY
135
n
46
GLY
135
A
GLU
136
n
47
GLU
136
A
GLU
137
n
48
GLU
137
A
ALA
138
n
49
ALA
138
A
SER
139
n
50
SER
139
A
LEU
140
n
51
LEU
140
A
MET
141
n
52
MET
141
A
VAL
142
n
53
VAL
142
A
TYR
143
n
54
TYR
143
A
ASP
144
n
55
ASP
144
A
ILE
145
n
56
ILE
145
A
TRP
146
n
57
TRP
146
A
GLU
147
n
58
GLU
147
A
n
59
148
A
n
60
149
A
n
61
150
A
n
62
151
A
n
63
152
A
n
64
153
A
n
65
154
A
n
66
155
A
n
67
156
A
n
68
157
A
CYS
158
n
69
CYS
158
A
MET
159
n
70
MET
159
A
ALA
160
n
71
ALA
160
A
MET
161
n
72
MET
161
A
GLY
162
n
73
GLY
162
A
ASP
163
n
74
ASP
163
A
ALA
164
n
75
ALA
164
A
TYR
165
n
76
TYR
165
A
VAL
166
n
77
VAL
166
A
ILE
167
n
78
ILE
167
A
VAL
168
n
79
VAL
168
A
TYR
169
n
80
TYR
169
A
SER
170
n
81
SER
170
A
VAL
171
n
82
VAL
171
A
THR
172
n
83
THR
172
A
ASP
173
n
84
ASP
173
A
LYS
174
n
85
LYS
174
A
GLY
175
n
86
GLY
175
A
SER
176
n
87
SER
176
A
PHE
177
n
88
PHE
177
A
GLU
178
n
89
GLU
178
A
LYS
179
n
90
LYS
179
A
ALA
180
n
91
ALA
180
A
SER
181
n
92
SER
181
A
GLU
182
n
93
GLU
182
A
LEU
183
n
94
LEU
183
A
ARG
184
n
95
ARG
184
A
VAL
185
n
96
VAL
185
A
GLN
186
n
97
GLN
186
A
LEU
187
n
98
LEU
187
A
ARG
188
n
99
ARG
188
A
ARG
189
n
100
ARG
189
A
ALA
190
n
101
ALA
190
A
ARG
191
n
102
ARG
191
A
n
103
192
A
n
104
193
A
n
105
194
A
ASP
195
n
106
ASP
195
A
VAL
196
n
107
VAL
196
A
PRO
197
n
108
PRO
197
A
ILE
198
n
109
ILE
198
A
ILE
199
n
110
ILE
199
A
LEU
200
n
111
LEU
200
A
VAL
201
n
112
VAL
201
A
GLY
202
n
113
GLY
202
A
ASN
203
n
114
ASN
203
A
LYS
204
n
115
LYS
204
A
SER
205
n
116
SER
205
A
ASP
206
n
117
ASP
206
A
LEU
207
n
118
LEU
207
A
VAL
208
n
119
VAL
208
A
ARG
209
n
120
ARG
209
A
SER
210
n
121
SER
210
A
ARG
211
n
122
ARG
211
A
GLU
212
n
123
GLU
212
A
VAL
213
n
124
VAL
213
A
SER
214
n
125
SER
214
A
VAL
215
n
126
VAL
215
A
ASP
216
n
127
ASP
216
A
GLU
217
n
128
GLU
217
A
GLY
218
n
129
GLY
218
A
ARG
219
n
130
ARG
219
A
ALA
220
n
131
ALA
220
A
CYS
221
n
132
CYS
221
A
ALA
222
n
133
ALA
222
A
VAL
223
n
134
VAL
223
A
VAL
224
n
135
VAL
224
A
PHE
225
n
136
PHE
225
A
ASP
226
n
137
ASP
226
A
CYS
227
n
138
CYS
227
A
LYS
228
n
139
LYS
228
A
PHE
229
n
140
PHE
229
A
ILE
230
n
141
ILE
230
A
GLU
231
n
142
GLU
231
A
THR
232
n
143
THR
232
A
SER
233
n
144
SER
233
A
ALA
234
n
145
ALA
234
A
ALA
235
n
146
ALA
235
A
LEU
236
n
147
LEU
236
A
HIS
237
n
148
HIS
237
A
HIS
238
n
149
HIS
238
A
ASN
239
n
150
ASN
239
A
VAL
240
n
151
VAL
240
A
GLN
241
n
152
GLN
241
A
ALA
242
n
153
ALA
242
A
LEU
243
n
154
LEU
243
A
PHE
244
n
155
PHE
244
A
GLU
245
n
156
GLU
245
A
GLY
246
n
157
GLY
246
A
VAL
247
n
158
VAL
247
A
VAL
248
n
159
VAL
248
A
ARG
249
n
160
ARG
249
A
GLN
250
n
161
GLN
250
A
ILE
251
n
162
ILE
251
A
ARG
252
n
163
ARG
252
A
LEU
253
n
164
LEU
253
A
ARG
254
n
165
ARG
254
A
ARG
255
n
166
ARG
255
A
SER
90
n
1
SER
90
B
VAL
91
n
2
VAL
91
B
TYR
92
n
3
TYR
92
B
LYS
93
n
4
LYS
93
B
VAL
94
n
5
VAL
94
B
LEU
95
n
6
LEU
95
B
LEU
96
n
7
LEU
96
B
LEU
97
n
8
LEU
97
B
GLY
98
n
9
GLY
98
B
ALA
99
n
10
ALA
99
B
PRO
100
n
11
PRO
100
B
GLY
101
n
12
GLY
101
B
VAL
102
n
13
VAL
102
B
GLY
103
n
14
GLY
103
B
LYS
104
n
15
LYS
104
B
SER
105
n
16
SER
105
B
ALA
106
n
17
ALA
106
B
LEU
107
n
18
LEU
107
B
ALA
108
n
19
ALA
108
B
ARG
109
n
20
ARG
109
B
ILE
110
n
21
ILE
110
B
PHE
111
n
22
PHE
111
B
GLY
112
n
23
GLY
112
B
GLY
113
n
24
GLY
113
B
VAL
114
n
25
VAL
114
B
GLU
115
n
26
GLU
115
B
n
27
116
B
n
28
117
B
n
29
118
B
n
30
119
B
n
31
120
B
n
32
121
B
n
33
122
B
n
34
123
B
n
35
124
B
HIS
125
n
36
HIS
125
B
THR
126
n
37
THR
126
B
TYR
127
n
38
TYR
127
B
ASP
128
n
39
ASP
128
B
ARG
129
n
40
ARG
129
B
SER
130
n
41
SER
130
B
ILE
131
n
42
ILE
131
B
VAL
132
n
43
VAL
132
B
VAL
133
n
44
VAL
133
B
ASP
134
n
45
ASP
134
B
GLY
135
n
46
GLY
135
B
GLU
136
n
47
GLU
136
B
GLU
137
n
48
GLU
137
B
ALA
138
n
49
ALA
138
B
SER
139
n
50
SER
139
B
LEU
140
n
51
LEU
140
B
MET
141
n
52
MET
141
B
VAL
142
n
53
VAL
142
B
TYR
143
n
54
TYR
143
B
ASP
144
n
55
ASP
144
B
ILE
145
n
56
ILE
145
B
TRP
146
n
57
TRP
146
B
GLU
147
n
58
GLU
147
B
n
59
148
B
n
60
149
B
n
61
150
B
n
62
151
B
n
63
152
B
n
64
153
B
n
65
154
B
n
66
155
B
n
67
156
B
n
68
157
B
n
69
158
B
n
70
159
B
ALA
160
n
71
ALA
160
B
MET
161
n
72
MET
161
B
GLY
162
n
73
GLY
162
B
ASP
163
n
74
ASP
163
B
ALA
164
n
75
ALA
164
B
TYR
165
n
76
TYR
165
B
VAL
166
n
77
VAL
166
B
ILE
167
n
78
ILE
167
B
VAL
168
n
79
VAL
168
B
TYR
169
n
80
TYR
169
B
SER
170
n
81
SER
170
B
VAL
171
n
82
VAL
171
B
THR
172
n
83
THR
172
B
ASP
173
n
84
ASP
173
B
LYS
174
n
85
LYS
174
B
GLY
175
n
86
GLY
175
B
SER
176
n
87
SER
176
B
PHE
177
n
88
PHE
177
B
GLU
178
n
89
GLU
178
B
LYS
179
n
90
LYS
179
B
ALA
180
n
91
ALA
180
B
SER
181
n
92
SER
181
B
GLU
182
n
93
GLU
182
B
LEU
183
n
94
LEU
183
B
ARG
184
n
95
ARG
184
B
VAL
185
n
96
VAL
185
B
GLN
186
n
97
GLN
186
B
LEU
187
n
98
LEU
187
B
ARG
188
n
99
ARG
188
B
ARG
189
n
100
ARG
189
B
ALA
190
n
101
ALA
190
B
ARG
191
n
102
ARG
191
B
n
103
192
B
THR
193
n
104
THR
193
B
ASP
194
n
105
ASP
194
B
ASP
195
n
106
ASP
195
B
VAL
196
n
107
VAL
196
B
PRO
197
n
108
PRO
197
B
ILE
198
n
109
ILE
198
B
ILE
199
n
110
ILE
199
B
LEU
200
n
111
LEU
200
B
VAL
201
n
112
VAL
201
B
GLY
202
n
113
GLY
202
B
ASN
203
n
114
ASN
203
B
LYS
204
n
115
LYS
204
B
SER
205
n
116
SER
205
B
ASP
206
n
117
ASP
206
B
LEU
207
n
118
LEU
207
B
VAL
208
n
119
VAL
208
B
ARG
209
n
120
ARG
209
B
SER
210
n
121
SER
210
B
ARG
211
n
122
ARG
211
B
GLU
212
n
123
GLU
212
B
VAL
213
n
124
VAL
213
B
SER
214
n
125
SER
214
B
VAL
215
n
126
VAL
215
B
ASP
216
n
127
ASP
216
B
GLU
217
n
128
GLU
217
B
GLY
218
n
129
GLY
218
B
ARG
219
n
130
ARG
219
B
ALA
220
n
131
ALA
220
B
CYS
221
n
132
CYS
221
B
ALA
222
n
133
ALA
222
B
VAL
223
n
134
VAL
223
B
VAL
224
n
135
VAL
224
B
PHE
225
n
136
PHE
225
B
ASP
226
n
137
ASP
226
B
CYS
227
n
138
CYS
227
B
LYS
228
n
139
LYS
228
B
PHE
229
n
140
PHE
229
B
ILE
230
n
141
ILE
230
B
GLU
231
n
142
GLU
231
B
THR
232
n
143
THR
232
B
SER
233
n
144
SER
233
B
ALA
234
n
145
ALA
234
B
ALA
235
n
146
ALA
235
B
LEU
236
n
147
LEU
236
B
HIS
237
n
148
HIS
237
B
HIS
238
n
149
HIS
238
B
ASN
239
n
150
ASN
239
B
VAL
240
n
151
VAL
240
B
GLN
241
n
152
GLN
241
B
ALA
242
n
153
ALA
242
B
LEU
243
n
154
LEU
243
B
PHE
244
n
155
PHE
244
B
GLU
245
n
156
GLU
245
B
GLY
246
n
157
GLY
246
B
VAL
247
n
158
VAL
247
B
VAL
248
n
159
VAL
248
B
ARG
249
n
160
ARG
249
B
GLN
250
n
161
GLN
250
B
ILE
251
n
162
ILE
251
B
ARG
252
n
163
ARG
252
B
LEU
253
n
164
LEU
253
B
ARG
254
n
165
ARG
254
B
ARG
255
n
166
ARG
255
B
author_and_software_defined_assembly
PISA
1
monomeric
author_and_software_defined_assembly
PISA
1
monomeric
A
HOH
28
G
O
HOH
1_555
A
MG
257
D
MG
MG
1_555
A
HOH
29
G
O
HOH
1_555
163.8
A
HOH
28
G
O
HOH
1_555
A
MG
257
D
MG
MG
1_555
A
GLU
147
A
OE2
GLU
58
1_555
111.3
A
HOH
29
G
O
HOH
1_555
A
MG
257
D
MG
MG
1_555
A
GLU
147
A
OE2
GLU
58
1_555
83.5
A
HOH
28
G
O
HOH
1_555
A
MG
257
D
MG
MG
1_555
A
GNP
256
C
O2B
GNP
1_555
89.5
A
HOH
29
G
O
HOH
1_555
A
MG
257
D
MG
MG
1_555
A
GNP
256
C
O2B
GNP
1_555
75.4
A
GLU
147
A
OE2
GLU
58
1_555
A
MG
257
D
MG
MG
1_555
A
GNP
256
C
O2B
GNP
1_555
158.7
B
HOH
30
H
O
HOH
1_555
B
MG
257
F
MG
MG
1_555
B
HOH
31
H
O
HOH
1_555
163.6
B
HOH
30
H
O
HOH
1_555
B
MG
257
F
MG
MG
1_555
B
SER
105
B
OG
SER
16
1_555
84.9
B
HOH
31
H
O
HOH
1_555
B
MG
257
F
MG
MG
1_555
B
SER
105
B
OG
SER
16
1_555
83.0
B
HOH
30
H
O
HOH
1_555
B
MG
257
F
MG
MG
1_555
B
GNP
256
E
O3G
GNP
1_555
84.4
B
HOH
31
H
O
HOH
1_555
B
MG
257
F
MG
MG
1_555
B
GNP
256
E
O3G
GNP
1_555
102.1
B
SER
105
B
OG
SER
16
1_555
B
MG
257
F
MG
MG
1_555
B
GNP
256
E
O3G
GNP
1_555
154.5
B
HOH
30
H
O
HOH
1_555
B
MG
257
F
MG
MG
1_555
B
GNP
256
E
O2B
GNP
1_555
90.2
B
HOH
31
H
O
HOH
1_555
B
MG
257
F
MG
MG
1_555
B
GNP
256
E
O2B
GNP
1_555
76.9
B
SER
105
B
OG
SER
16
1_555
B
MG
257
F
MG
MG
1_555
B
GNP
256
E
O2B
GNP
1_555
80.7
B
GNP
256
E
O3G
GNP
1_555
B
MG
257
F
MG
MG
1_555
B
GNP
256
E
O2B
GNP
1_555
76.3
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
TYR
127
A
N
TYR
38
A
O
VAL
142
A
O
VAL
53
A
O
TYR
143
A
O
TYR
54
A
N
VAL
94
A
N
VAL
5
A
N
LEU
97
A
N
LEU
8
A
O
VAL
166
A
O
VAL
77
A
N
ILE
167
A
N
ILE
78
A
O
VAL
201
A
O
VAL
112
A
N
LEU
200
A
N
LEU
111
A
O
LYS
228
A
O
LYS
139
B
N
TYR
127
B
N
TYR
38
B
O
VAL
142
B
O
VAL
53
B
O
TYR
143
B
O
TYR
54
B
N
VAL
94
B
N
VAL
5
B
N
LEU
97
B
N
LEU
8
B
O
VAL
168
B
O
VAL
79
B
N
ILE
167
B
N
ILE
78
B
O
ILE
199
B
O
ILE
110
B
N
LEU
200
B
N
LEU
111
B
O
LYS
228
B
O
LYS
139
1
A
CG
GLU
137
A
CG
GLU
48
1
Y
1
A
CD
GLU
137
A
CD
GLU
48
1
Y
1
A
OE1
GLU
137
A
OE1
GLU
48
1
Y
1
A
OE2
GLU
137
A
OE2
GLU
48
1
Y
1
A
VAL
114
A
VAL
25
1
Y
1
A
GLU
115
A
GLU
26
1
Y
1
A
ASP
116
A
ASP
27
1
Y
1
A
GLY
117
A
GLY
28
1
Y
1
A
PRO
118
A
PRO
29
1
Y
1
A
GLU
119
A
GLU
30
1
Y
1
A
ALA
120
A
ALA
31
1
Y
1
A
GLU
121
A
GLU
32
1
Y
1
A
ALA
122
A
ALA
33
1
Y
1
A
ALA
123
A
ALA
34
1
Y
1
A
GLY
124
A
GLY
35
1
Y
1
A
GLN
148
A
GLN
59
1
Y
1
A
ASP
149
A
ASP
60
1
Y
1
A
GLY
150
A
GLY
61
1
Y
1
A
GLY
151
A
GLY
62
1
Y
1
A
ARG
152
A
ARG
63
1
Y
1
A
TRP
153
A
TRP
64
1
Y
1
A
LEU
154
A
LEU
65
1
Y
1
A
PRO
155
A
PRO
66
1
Y
1
A
GLY
156
A
GLY
67
1
Y
1
A
HIS
157
A
HIS
68
1
Y
1
A
GLN
192
A
GLN
103
1
Y
1
A
THR
193
A
THR
104
1
Y
1
A
ASP
194
A
ASP
105
1
Y
1
B
ASP
116
B
ASP
27
1
Y
1
B
GLY
117
B
GLY
28
1
Y
1
B
PRO
118
B
PRO
29
1
Y
1
B
GLU
119
B
GLU
30
1
Y
1
B
ALA
120
B
ALA
31
1
Y
1
B
GLU
121
B
GLU
32
1
Y
1
B
ALA
122
B
ALA
33
1
Y
1
B
ALA
123
B
ALA
34
1
Y
1
B
GLY
124
B
GLY
35
1
Y
1
B
GLN
148
B
GLN
59
1
Y
1
B
ASP
149
B
ASP
60
1
Y
1
B
GLY
150
B
GLY
61
1
Y
1
B
GLY
151
B
GLY
62
1
Y
1
B
ARG
152
B
ARG
63
1
Y
1
B
TRP
153
B
TRP
64
1
Y
1
B
LEU
154
B
LEU
65
1
Y
1
B
PRO
155
B
PRO
66
1
Y
1
B
GLY
156
B
GLY
67
1
Y
1
B
HIS
157
B
HIS
68
1
Y
1
B
CYS
158
B
CYS
69
1
Y
1
B
MET
159
B
MET
70
1
Y
1
B
GLN
192
B
GLN
103
1
Y
1
A
A
OG
MG
SER
MG
105
257
1.62
1
A
A
O3G
MG
GNP
MG
256
257
1.63
1
A
ARG
129
174.04
142.81
1
A
ASP
134
36.66
73.13
1
A
GLU
137
-62.78
-168.25
1
A
ALA
138
167.39
125.49
1
A
MET
159
48.34
-131.23
1
A
ALA
190
-45.86
-78.85
1
A
LYS
204
74.69
34.71
1
A
CYS
221
-170.79
-33.52
1
A
ARG
254
-109.41
71.06
1
B
TRP
146
-74.75
21.25
1
B
ALA
190
-78.88
-85.65
1
B
LYS
204
76.72
40.62
1
B
CYS
221
-175.15
-40.07
1
B
ASP
226
38.08
67.63
1
B
ARG
254
-116.32
66.82
41.401
1.05
0.52
0.00
1.05
0.00
-1.57
0.937
0.896
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.26270
0.21177
0.21422
2.50
50
406
8043
8043
4.8
95.12
13.832
0.305
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.365
0.80
0.80
1.20
PDB:2DPX
MAXIMUM LIKELIHOOD
MASK
2.50
50
31
2320
66
0
2223
0.006
0.022
2317
0.849
1.996
3134
7.359
5.000
278
33.933
22.079
101
22.110
15.000
395
22.446
15.000
26
0.070
0.200
360
0.007
0.020
1684
0.233
0.200
1118
0.313
0.200
1555
0.154
0.200
121
0.171
0.200
6
0.267
0.200
76
0.330
0.200
11
1.142
2.000
1406
1.981
3.000
2251
1.199
2.000
911
1.919
3.000
883
0.315
0.273
2.565
24
502
20
74.82
2.5
50
3Q7P
8487
8487
0
0
0.08
1
17.6
5.0
95.1
0.304
2.50
2.59
4.2
1
76.5
0.259
2.59
2.69
4.8
1
91.0
0.236
2.69
2.82
6.3
1
90.3
0.179
2.82
2.96
7.7
1
97.0
0.136
2.96
3.15
11.1
1
98.9
0.1
3.15
3.39
14.0
1
99.8
0.083
3.39
3.73
18.3
1
99.4
0.069
3.73
4.27
20.4
1
99.6
0.059
4.27
5.38
25.6
1
99.9
0.051
5.38
50
27.3
1
99.1
data collection
HKL-2000
phasing
MOLREP
refinement
REFMAC
5.2.0019
data reduction
HKL-2000
data scaling
HKL-2000
N
Crystal Structure of Rad G-domain-GTP Analog Complex
1
N
N
1
N
N
2
N
N
3
N
N
2
N
N
3
N
N
4
N
N
4
N
N
A
GLY
103
A
GLY
14
HELX_P
A
GLY
112
A
GLY
23
1
1
10
A
ASP
173
A
ASP
84
HELX_P
A
ARG
191
A
ARG
102
1
2
19
A
SER
214
A
SER
125
HELX_P
A
VAL
223
A
VAL
134
1
3
10
A
SER
233
A
SER
144
HELX_P
A
HIS
237
A
HIS
148
5
4
5
A
ASN
239
A
ASN
150
HELX_P
A
ARG
254
A
ARG
165
1
5
16
B
GLY
103
B
GLY
14
HELX_P
B
GLY
112
B
GLY
23
1
6
10
B
ASP
173
B
ASP
84
HELX_P
B
ARG
191
B
ARG
102
1
7
19
B
SER
214
B
SER
125
HELX_P
B
VAL
223
B
VAL
134
1
8
10
B
SER
233
B
SER
144
HELX_P
B
HIS
237
B
HIS
148
5
9
5
B
ASN
239
B
ASN
150
HELX_P
B
ARG
254
B
ARG
165
1
10
16
metalc
1.866
A
HOH
28
G
O
HOH
1_555
A
MG
257
D
MG
MG
1_555
metalc
2.064
A
HOH
29
G
O
HOH
1_555
A
MG
257
D
MG
MG
1_555
metalc
1.993
A
GLU
147
A
OE2
GLU
58
1_555
A
MG
257
D
MG
MG
1_555
metalc
2.283
A
GNP
256
C
O2B
GNP
1_555
A
MG
257
D
MG
MG
1_555
metalc
2.009
B
HOH
30
H
O
HOH
1_555
B
MG
257
F
MG
MG
1_555
metalc
2.284
B
HOH
31
H
O
HOH
1_555
B
MG
257
F
MG
MG
1_555
metalc
1.875
B
SER
105
B
OG
SER
16
1_555
B
MG
257
F
MG
MG
1_555
metalc
1.938
B
GNP
256
E
O3G
GNP
1_555
B
MG
257
F
MG
MG
1_555
metalc
2.266
B
GNP
256
E
O2B
GNP
1_555
B
MG
257
F
MG
MG
1_555
SIGNALING PROTEIN
G-domain, G-protein, Cav2 beta, SIGNALING PROTEIN
RAD_HUMAN
UNP
1
90
P55042
SVYKVLLLGAPGVGKSALARIFGGVEDGPEAEAAGHTYDRSIVVDGEEASLMVYDIWEQDGGRWLPGHCMAMGDAYVIVY
SVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLVRSREVSVDEGRACAVVFDCKFIETSAALHHNVQALFEGVVR
QIRLRR
90
255
3Q7P
90
255
P55042
A
1
1
166
90
255
3Q7P
90
255
P55042
B
1
1
166
6
6
anti-parallel
parallel
parallel
parallel
parallel
anti-parallel
parallel
parallel
parallel
parallel
A
THR
126
A
THR
37
A
SER
130
A
SER
41
A
SER
139
A
SER
50
A
TYR
143
A
TYR
54
A
VAL
91
A
VAL
2
A
LEU
97
A
LEU
8
A
ALA
164
A
ALA
75
A
SER
170
A
SER
81
A
ILE
198
A
ILE
109
A
ASN
203
A
ASN
114
A
LYS
228
A
LYS
139
A
GLU
231
A
GLU
142
B
THR
126
B
THR
37
B
VAL
133
B
VAL
44
B
GLU
136
B
GLU
47
B
ASP
144
B
ASP
55
B
VAL
91
B
VAL
2
B
GLY
98
B
GLY
9
B
ALA
164
B
ALA
75
B
SER
170
B
SER
81
B
ILE
198
B
ILE
109
B
ASN
203
B
ASN
114
B
LYS
228
B
LYS
139
B
GLU
231
B
GLU
142
BINDING SITE FOR RESIDUE GNP B 256
B
GNP
256
Software
19
BINDING SITE FOR RESIDUE MG B 257
B
MG
257
Software
5
BINDING SITE FOR RESIDUE GNP A 256
A
GNP
256
Software
17
BINDING SITE FOR RESIDUE MG A 257
A
MG
257
Software
5
B
HOH
8
H
HOH
19
1_555
B
HOH
20
H
HOH
19
1_555
B
HOH
30
H
HOH
19
1_555
B
HOH
31
H
HOH
19
1_555
B
PRO
100
B
PRO
11
19
1_555
B
GLY
101
B
GLY
12
19
1_555
B
VAL
102
B
VAL
13
19
1_555
B
GLY
103
B
GLY
14
19
1_555
B
LYS
104
B
LYS
15
19
1_555
B
SER
105
B
SER
16
19
1_555
B
ALA
106
B
ALA
17
19
1_555
B
ASN
203
B
ASN
114
19
1_555
B
LYS
204
B
LYS
115
19
1_555
B
ASP
206
B
ASP
117
19
1_555
B
LEU
207
B
LEU
118
19
1_555
B
SER
233
B
SER
144
19
1_555
B
ALA
234
B
ALA
145
19
1_555
B
ALA
235
B
ALA
146
19
1_555
B
MG
257
F
MG
19
1_555
B
HOH
30
H
HOH
5
1_555
B
HOH
31
H
HOH
5
1_555
B
SER
105
B
SER
16
5
1_555
B
GLU
147
B
GLU
58
5
1_555
B
GNP
256
E
GNP
5
1_555
A
HOH
28
G
HOH
17
1_555
A
HOH
29
G
HOH
17
1_555
A
GLY
101
A
GLY
12
17
1_555
A
VAL
102
A
VAL
13
17
1_555
A
GLY
103
A
GLY
14
17
1_555
A
LYS
104
A
LYS
15
17
1_555
A
SER
105
A
SER
16
17
1_555
A
ALA
106
A
ALA
17
17
1_555
A
GLU
147
A
GLU
58
17
1_555
A
ASN
203
A
ASN
114
17
1_555
A
LYS
204
A
LYS
115
17
1_555
A
ASP
206
A
ASP
117
17
1_555
A
LEU
207
A
LEU
118
17
1_555
A
SER
233
A
SER
144
17
1_555
A
ALA
234
A
ALA
145
17
1_555
A
ALA
235
A
ALA
146
17
1_555
A
MG
257
D
MG
17
1_555
A
HOH
28
G
HOH
5
1_555
A
HOH
29
G
HOH
5
1_555
A
SER
105
A
SER
16
5
1_555
A
GLU
147
A
GLU
58
5
1_555
A
GNP
256
C
GNP
5
1_555
144
P 31