0.004390
0.000000
0.001304
0.000000
0.021596
0.000000
0.000000
0.000000
0.012150
0.000000
0.000000
0.000000
Borbulevych, O.Y.
Baker, B.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.000
106.550
90.000
227.774
46.305
85.859
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
US
J.Immunol.
JOIMA3
0952
0022-1767
187
2453
2463
10.4049/jimmunol.1101268
21795600
TCRs Used in Cancer Gene Therapy Cross-React with MART-1/Melan-A Tumor Antigens via Distinct Mechanisms.
2011
10.2210/pdb3qdj/pdb
pdb_00003qdj
100
1
CCD
2009-10-25
ADSC QUANTUM 210r
SI111
SINGLE WAVELENGTH
M
x-ray
1
0.98
1.0
19-ID
APS
0.98
SYNCHROTRON
APS BEAMLINE 19-ID
31854.203
HLA class I histocompatibility antigen, A-2 alpha chain
1
man
polymer
11879.356
Beta-2-microglobulin
1
man
polymer
813.982
MART-1(27-35) peptide
1
syn
polymer
22007.227
DMF5 alpha chain
1
man
polymer
26927.994
DMF5 beta chain
1
man
polymer
18.015
water
48
nat
water
MHC class I antigen A*2
Beta-2-microglobulin form pI 5.3
no
no
GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGT
LRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYL
EGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGT
FQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE
GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGT
LRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYL
EGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGT
FQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE
A
polypeptide(L)
no
no
MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYA
CRVNHVTLSQPKIVKWDRDM
MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYA
CRVNHVTLSQPKIVKWDRDM
B
polypeptide(L)
no
no
AAGIGILTV
AAGIGILTV
C
polypeptide(L)
no
no
KEVEQNSGPLSVPEGAIASLNCTYSDRGSQSFFWYRQYSGKSPELIMFIYSNGDKEDGRFTAQLNKASQYVSLLIRDSQP
SDSATYLCAVNFGGGKLIFGQGTELSVKPNIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLD
MRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPS
KEVEQNSGPLSVPEGAIASLNCTYSDRGSQSFFWYRQYSGKSPELIMFIYSNGDKEDGRFTAQLNKASQYVSLLIRDSQP
SDSATYLCAVNFGGGKLIFGQGTELSVKPNIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLD
MRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPS
D
polypeptide(L)
no
no
IAGITQAPTSQILAAGRRMTLRCTQDMRHNAMYWYRQDLGLGLRLIHYSNTAGTTGKGEVPDGYSVSRANTDDFPLTLAS
AVPSQTSVYFCASSLSFGTEAFFGQGTRLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVN
GKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQDPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGR
AD
IAGITQAPTSQILAAGRRMTLRCTQDMRHNAMYWYRQDLGLGLRLIHYSNTAGTTGKGEVPDGYSVSRANTDDFPLTLAS
AVPSQTSVYFCASSLSFGTEAFFGQGTRLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVN
GKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQDPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGR
AD
E
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
HLA-A, HLAA
9606
Homo sapiens
562
Escherichia coli
BL21
plasmid
pHN1
human
sample
B2M, CDABP0092, HDCMA22P
9606
Homo sapiens
562
Escherichia coli
BL21
plasmid
pHN1
human
sample
9606
Homo sapiens
562
Escherichia coli
BL21
plasmid
human
sample
9606
Homo sapiens
562
Escherichia coli
BL21
plasmid
1
2.32
47.01
VAPOR DIFFUSION, SITTING DROP
8.5
PEG 24%, TRIS 0.1M, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 297K
297
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
repository
Initial release
Version format compliance
Database references
Database references
Data collection
Database references
Refinement description
1
0
2011-07-06
1
1
2011-07-13
1
2
2011-08-17
1
3
2011-09-07
1
4
2023-09-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
RCSB
Y
RCSB
2011-01-18
REL
REL
HOH
water
2GJ6
PDB entry 2GJ6
PDB
experimental model
HOH
5
6
HOH
HOH
276
A
HOH
6
6
HOH
HOH
277
A
HOH
7
6
HOH
HOH
278
A
HOH
9
6
HOH
HOH
279
A
HOH
10
6
HOH
HOH
280
A
HOH
12
6
HOH
HOH
281
A
HOH
13
6
HOH
HOH
282
A
HOH
14
6
HOH
HOH
283
A
HOH
16
6
HOH
HOH
284
A
HOH
23
6
HOH
HOH
285
A
HOH
27
6
HOH
HOH
286
A
HOH
28
6
HOH
HOH
287
A
HOH
29
6
HOH
HOH
288
A
HOH
30
6
HOH
HOH
289
A
HOH
31
6
HOH
HOH
290
A
HOH
32
6
HOH
HOH
291
A
HOH
34
6
HOH
HOH
292
A
HOH
35
6
HOH
HOH
293
A
HOH
36
6
HOH
HOH
294
A
HOH
37
6
HOH
HOH
295
A
HOH
38
6
HOH
HOH
296
A
HOH
39
6
HOH
HOH
297
A
HOH
41
6
HOH
HOH
298
A
HOH
47
6
HOH
HOH
299
A
HOH
1
6
HOH
HOH
100
B
HOH
2
6
HOH
HOH
101
B
HOH
8
6
HOH
HOH
102
B
HOH
11
6
HOH
HOH
103
B
HOH
15
6
HOH
HOH
104
B
HOH
18
6
HOH
HOH
105
B
HOH
20
6
HOH
HOH
106
B
HOH
21
6
HOH
HOH
107
B
HOH
22
6
HOH
HOH
108
B
HOH
24
6
HOH
HOH
109
B
HOH
26
6
HOH
HOH
110
B
HOH
43
6
HOH
HOH
111
B
HOH
46
6
HOH
HOH
112
B
HOH
25
6
HOH
HOH
25
C
HOH
42
6
HOH
HOH
42
C
HOH
3
6
HOH
HOH
200
D
HOH
4
6
HOH
HOH
201
D
HOH
17
6
HOH
HOH
202
D
HOH
19
6
HOH
HOH
203
D
HOH
45
6
HOH
HOH
204
D
HOH
48
6
HOH
HOH
205
D
HOH
33
6
HOH
HOH
246
E
HOH
40
6
HOH
HOH
247
E
HOH
44
6
HOH
HOH
248
E
GLY
1
n
1
GLY
1
A
SER
2
n
2
SER
2
A
HIS
3
n
3
HIS
3
A
SER
4
n
4
SER
4
A
MET
5
n
5
MET
5
A
ARG
6
n
6
ARG
6
A
TYR
7
n
7
TYR
7
A
PHE
8
n
8
PHE
8
A
PHE
9
n
9
PHE
9
A
THR
10
n
10
THR
10
A
SER
11
n
11
SER
11
A
VAL
12
n
12
VAL
12
A
SER
13
n
13
SER
13
A
ARG
14
n
14
ARG
14
A
PRO
15
n
15
PRO
15
A
GLY
16
n
16
GLY
16
A
ARG
17
n
17
ARG
17
A
GLY
18
n
18
GLY
18
A
GLU
19
n
19
GLU
19
A
PRO
20
n
20
PRO
20
A
ARG
21
n
21
ARG
21
A
PHE
22
n
22
PHE
22
A
ILE
23
n
23
ILE
23
A
ALA
24
n
24
ALA
24
A
VAL
25
n
25
VAL
25
A
GLY
26
n
26
GLY
26
A
TYR
27
n
27
TYR
27
A
VAL
28
n
28
VAL
28
A
ASP
29
n
29
ASP
29
A
ASP
30
n
30
ASP
30
A
THR
31
n
31
THR
31
A
GLN
32
n
32
GLN
32
A
PHE
33
n
33
PHE
33
A
VAL
34
n
34
VAL
34
A
ARG
35
n
35
ARG
35
A
PHE
36
n
36
PHE
36
A
ASP
37
n
37
ASP
37
A
SER
38
n
38
SER
38
A
ASP
39
n
39
ASP
39
A
ALA
40
n
40
ALA
40
A
ALA
41
n
41
ALA
41
A
SER
42
n
42
SER
42
A
GLN
43
n
43
GLN
43
A
ARG
44
n
44
ARG
44
A
MET
45
n
45
MET
45
A
GLU
46
n
46
GLU
46
A
PRO
47
n
47
PRO
47
A
ARG
48
n
48
ARG
48
A
ALA
49
n
49
ALA
49
A
PRO
50
n
50
PRO
50
A
TRP
51
n
51
TRP
51
A
ILE
52
n
52
ILE
52
A
GLU
53
n
53
GLU
53
A
GLN
54
n
54
GLN
54
A
GLU
55
n
55
GLU
55
A
GLY
56
n
56
GLY
56
A
PRO
57
n
57
PRO
57
A
GLU
58
n
58
GLU
58
A
TYR
59
n
59
TYR
59
A
TRP
60
n
60
TRP
60
A
ASP
61
n
61
ASP
61
A
GLY
62
n
62
GLY
62
A
GLU
63
n
63
GLU
63
A
THR
64
n
64
THR
64
A
ARG
65
n
65
ARG
65
A
LYS
66
n
66
LYS
66
A
VAL
67
n
67
VAL
67
A
LYS
68
n
68
LYS
68
A
ALA
69
n
69
ALA
69
A
HIS
70
n
70
HIS
70
A
SER
71
n
71
SER
71
A
GLN
72
n
72
GLN
72
A
THR
73
n
73
THR
73
A
HIS
74
n
74
HIS
74
A
ARG
75
n
75
ARG
75
A
VAL
76
n
76
VAL
76
A
ASP
77
n
77
ASP
77
A
LEU
78
n
78
LEU
78
A
GLY
79
n
79
GLY
79
A
THR
80
n
80
THR
80
A
LEU
81
n
81
LEU
81
A
ARG
82
n
82
ARG
82
A
GLY
83
n
83
GLY
83
A
TYR
84
n
84
TYR
84
A
TYR
85
n
85
TYR
85
A
ASN
86
n
86
ASN
86
A
GLN
87
n
87
GLN
87
A
SER
88
n
88
SER
88
A
GLU
89
n
89
GLU
89
A
ALA
90
n
90
ALA
90
A
GLY
91
n
91
GLY
91
A
SER
92
n
92
SER
92
A
HIS
93
n
93
HIS
93
A
THR
94
n
94
THR
94
A
VAL
95
n
95
VAL
95
A
GLN
96
n
96
GLN
96
A
ARG
97
n
97
ARG
97
A
MET
98
n
98
MET
98
A
TYR
99
n
99
TYR
99
A
GLY
100
n
100
GLY
100
A
CYS
101
n
101
CYS
101
A
ASP
102
n
102
ASP
102
A
VAL
103
n
103
VAL
103
A
GLY
104
n
104
GLY
104
A
SER
105
n
105
SER
105
A
ASP
106
n
106
ASP
106
A
TRP
107
n
107
TRP
107
A
ARG
108
n
108
ARG
108
A
PHE
109
n
109
PHE
109
A
LEU
110
n
110
LEU
110
A
ARG
111
n
111
ARG
111
A
GLY
112
n
112
GLY
112
A
TYR
113
n
113
TYR
113
A
HIS
114
n
114
HIS
114
A
GLN
115
n
115
GLN
115
A
TYR
116
n
116
TYR
116
A
ALA
117
n
117
ALA
117
A
TYR
118
n
118
TYR
118
A
ASP
119
n
119
ASP
119
A
GLY
120
n
120
GLY
120
A
LYS
121
n
121
LYS
121
A
ASP
122
n
122
ASP
122
A
TYR
123
n
123
TYR
123
A
ILE
124
n
124
ILE
124
A
ALA
125
n
125
ALA
125
A
LEU
126
n
126
LEU
126
A
LYS
127
n
127
LYS
127
A
GLU
128
n
128
GLU
128
A
ASP
129
n
129
ASP
129
A
LEU
130
n
130
LEU
130
A
ARG
131
n
131
ARG
131
A
SER
132
n
132
SER
132
A
TRP
133
n
133
TRP
133
A
THR
134
n
134
THR
134
A
ALA
135
n
135
ALA
135
A
ALA
136
n
136
ALA
136
A
ASP
137
n
137
ASP
137
A
MET
138
n
138
MET
138
A
ALA
139
n
139
ALA
139
A
ALA
140
n
140
ALA
140
A
GLN
141
n
141
GLN
141
A
THR
142
n
142
THR
142
A
THR
143
n
143
THR
143
A
LYS
144
n
144
LYS
144
A
HIS
145
n
145
HIS
145
A
LYS
146
n
146
LYS
146
A
TRP
147
n
147
TRP
147
A
GLU
148
n
148
GLU
148
A
ALA
149
n
149
ALA
149
A
ALA
150
n
150
ALA
150
A
HIS
151
n
151
HIS
151
A
VAL
152
n
152
VAL
152
A
ALA
153
n
153
ALA
153
A
GLU
154
n
154
GLU
154
A
GLN
155
n
155
GLN
155
A
LEU
156
n
156
LEU
156
A
ARG
157
n
157
ARG
157
A
ALA
158
n
158
ALA
158
A
TYR
159
n
159
TYR
159
A
LEU
160
n
160
LEU
160
A
GLU
161
n
161
GLU
161
A
GLY
162
n
162
GLY
162
A
THR
163
n
163
THR
163
A
CYS
164
n
164
CYS
164
A
VAL
165
n
165
VAL
165
A
GLU
166
n
166
GLU
166
A
TRP
167
n
167
TRP
167
A
LEU
168
n
168
LEU
168
A
ARG
169
n
169
ARG
169
A
ARG
170
n
170
ARG
170
A
TYR
171
n
171
TYR
171
A
LEU
172
n
172
LEU
172
A
GLU
173
n
173
GLU
173
A
ASN
174
n
174
ASN
174
A
GLY
175
n
175
GLY
175
A
LYS
176
n
176
LYS
176
A
GLU
177
n
177
GLU
177
A
THR
178
n
178
THR
178
A
LEU
179
n
179
LEU
179
A
GLN
180
n
180
GLN
180
A
ARG
181
n
181
ARG
181
A
THR
182
n
182
THR
182
A
ASP
183
n
183
ASP
183
A
ALA
184
n
184
ALA
184
A
PRO
185
n
185
PRO
185
A
LYS
186
n
186
LYS
186
A
THR
187
n
187
THR
187
A
HIS
188
n
188
HIS
188
A
MET
189
n
189
MET
189
A
THR
190
n
190
THR
190
A
HIS
191
n
191
HIS
191
A
HIS
192
n
192
HIS
192
A
ALA
193
n
193
ALA
193
A
VAL
194
n
194
VAL
194
A
SER
195
n
195
SER
195
A
ASP
196
n
196
ASP
196
A
HIS
197
n
197
HIS
197
A
GLU
198
n
198
GLU
198
A
ALA
199
n
199
ALA
199
A
THR
200
n
200
THR
200
A
LEU
201
n
201
LEU
201
A
ARG
202
n
202
ARG
202
A
CYS
203
n
203
CYS
203
A
TRP
204
n
204
TRP
204
A
ALA
205
n
205
ALA
205
A
LEU
206
n
206
LEU
206
A
SER
207
n
207
SER
207
A
PHE
208
n
208
PHE
208
A
TYR
209
n
209
TYR
209
A
PRO
210
n
210
PRO
210
A
ALA
211
n
211
ALA
211
A
GLU
212
n
212
GLU
212
A
ILE
213
n
213
ILE
213
A
THR
214
n
214
THR
214
A
LEU
215
n
215
LEU
215
A
THR
216
n
216
THR
216
A
TRP
217
n
217
TRP
217
A
GLN
218
n
218
GLN
218
A
ARG
219
n
219
ARG
219
A
ASP
220
n
220
ASP
220
A
GLY
221
n
221
GLY
221
A
GLU
222
n
222
GLU
222
A
ASP
223
n
223
ASP
223
A
GLN
224
n
224
GLN
224
A
THR
225
n
225
THR
225
A
GLN
226
n
226
GLN
226
A
ASP
227
n
227
ASP
227
A
THR
228
n
228
THR
228
A
GLU
229
n
229
GLU
229
A
LEU
230
n
230
LEU
230
A
VAL
231
n
231
VAL
231
A
GLU
232
n
232
GLU
232
A
THR
233
n
233
THR
233
A
ARG
234
n
234
ARG
234
A
PRO
235
n
235
PRO
235
A
ALA
236
n
236
ALA
236
A
GLY
237
n
237
GLY
237
A
ASP
238
n
238
ASP
238
A
GLY
239
n
239
GLY
239
A
THR
240
n
240
THR
240
A
PHE
241
n
241
PHE
241
A
GLN
242
n
242
GLN
242
A
LYS
243
n
243
LYS
243
A
TRP
244
n
244
TRP
244
A
ALA
245
n
245
ALA
245
A
ALA
246
n
246
ALA
246
A
VAL
247
n
247
VAL
247
A
VAL
248
n
248
VAL
248
A
VAL
249
n
249
VAL
249
A
PRO
250
n
250
PRO
250
A
SER
251
n
251
SER
251
A
GLY
252
n
252
GLY
252
A
GLN
253
n
253
GLN
253
A
GLU
254
n
254
GLU
254
A
GLN
255
n
255
GLN
255
A
ARG
256
n
256
ARG
256
A
TYR
257
n
257
TYR
257
A
THR
258
n
258
THR
258
A
CYS
259
n
259
CYS
259
A
HIS
260
n
260
HIS
260
A
VAL
261
n
261
VAL
261
A
GLN
262
n
262
GLN
262
A
HIS
263
n
263
HIS
263
A
GLU
264
n
264
GLU
264
A
GLY
265
n
265
GLY
265
A
LEU
266
n
266
LEU
266
A
PRO
267
n
267
PRO
267
A
LYS
268
n
268
LYS
268
A
PRO
269
n
269
PRO
269
A
LEU
270
n
270
LEU
270
A
THR
271
n
271
THR
271
A
LEU
272
n
272
LEU
272
A
ARG
273
n
273
ARG
273
A
TRP
274
n
274
TRP
274
A
GLU
275
n
275
GLU
275
A
MET
0
n
1
MET
0
B
ILE
1
n
2
ILE
1
B
GLN
2
n
3
GLN
2
B
ARG
3
n
4
ARG
3
B
THR
4
n
5
THR
4
B
PRO
5
n
6
PRO
5
B
LYS
6
n
7
LYS
6
B
ILE
7
n
8
ILE
7
B
GLN
8
n
9
GLN
8
B
VAL
9
n
10
VAL
9
B
TYR
10
n
11
TYR
10
B
SER
11
n
12
SER
11
B
ARG
12
n
13
ARG
12
B
HIS
13
n
14
HIS
13
B
PRO
14
n
15
PRO
14
B
ALA
15
n
16
ALA
15
B
GLU
16
n
17
GLU
16
B
ASN
17
n
18
ASN
17
B
GLY
18
n
19
GLY
18
B
LYS
19
n
20
LYS
19
B
SER
20
n
21
SER
20
B
ASN
21
n
22
ASN
21
B
PHE
22
n
23
PHE
22
B
LEU
23
n
24
LEU
23
B
ASN
24
n
25
ASN
24
B
CYS
25
n
26
CYS
25
B
TYR
26
n
27
TYR
26
B
VAL
27
n
28
VAL
27
B
SER
28
n
29
SER
28
B
GLY
29
n
30
GLY
29
B
PHE
30
n
31
PHE
30
B
HIS
31
n
32
HIS
31
B
PRO
32
n
33
PRO
32
B
SER
33
n
34
SER
33
B
ASP
34
n
35
ASP
34
B
ILE
35
n
36
ILE
35
B
GLU
36
n
37
GLU
36
B
VAL
37
n
38
VAL
37
B
ASP
38
n
39
ASP
38
B
LEU
39
n
40
LEU
39
B
LEU
40
n
41
LEU
40
B
LYS
41
n
42
LYS
41
B
ASN
42
n
43
ASN
42
B
GLY
43
n
44
GLY
43
B
GLU
44
n
45
GLU
44
B
ARG
45
n
46
ARG
45
B
ILE
46
n
47
ILE
46
B
GLU
47
n
48
GLU
47
B
LYS
48
n
49
LYS
48
B
VAL
49
n
50
VAL
49
B
GLU
50
n
51
GLU
50
B
HIS
51
n
52
HIS
51
B
SER
52
n
53
SER
52
B
ASP
53
n
54
ASP
53
B
LEU
54
n
55
LEU
54
B
SER
55
n
56
SER
55
B
PHE
56
n
57
PHE
56
B
SER
57
n
58
SER
57
B
LYS
58
n
59
LYS
58
B
ASP
59
n
60
ASP
59
B
TRP
60
n
61
TRP
60
B
SER
61
n
62
SER
61
B
PHE
62
n
63
PHE
62
B
TYR
63
n
64
TYR
63
B
LEU
64
n
65
LEU
64
B
LEU
65
n
66
LEU
65
B
TYR
66
n
67
TYR
66
B
TYR
67
n
68
TYR
67
B
THR
68
n
69
THR
68
B
GLU
69
n
70
GLU
69
B
PHE
70
n
71
PHE
70
B
THR
71
n
72
THR
71
B
PRO
72
n
73
PRO
72
B
THR
73
n
74
THR
73
B
GLU
74
n
75
GLU
74
B
LYS
75
n
76
LYS
75
B
ASP
76
n
77
ASP
76
B
GLU
77
n
78
GLU
77
B
TYR
78
n
79
TYR
78
B
ALA
79
n
80
ALA
79
B
CYS
80
n
81
CYS
80
B
ARG
81
n
82
ARG
81
B
VAL
82
n
83
VAL
82
B
ASN
83
n
84
ASN
83
B
HIS
84
n
85
HIS
84
B
VAL
85
n
86
VAL
85
B
THR
86
n
87
THR
86
B
LEU
87
n
88
LEU
87
B
SER
88
n
89
SER
88
B
GLN
89
n
90
GLN
89
B
PRO
90
n
91
PRO
90
B
LYS
91
n
92
LYS
91
B
ILE
92
n
93
ILE
92
B
VAL
93
n
94
VAL
93
B
LYS
94
n
95
LYS
94
B
TRP
95
n
96
TRP
95
B
ASP
96
n
97
ASP
96
B
ARG
97
n
98
ARG
97
B
ASP
98
n
99
ASP
98
B
MET
99
n
100
MET
99
B
ALA
1
n
1
ALA
1
C
ALA
2
n
2
ALA
2
C
GLY
3
n
3
GLY
3
C
ILE
4
n
4
ILE
4
C
GLY
5
n
5
GLY
5
C
ILE
6
n
6
ILE
6
C
LEU
7
n
7
LEU
7
C
THR
8
n
8
THR
8
C
VAL
9
n
9
VAL
9
C
LYS
1
n
1
LYS
1
D
GLU
2
n
2
GLU
2
D
VAL
3
n
3
VAL
3
D
GLU
4
n
4
GLU
4
D
GLN
5
n
5
GLN
5
D
ASN
6
n
6
ASN
6
D
SER
7
n
7
SER
7
D
GLY
8
n
8
GLY
8
D
PRO
9
n
9
PRO
9
D
LEU
10
n
10
LEU
10
D
SER
11
n
11
SER
11
D
VAL
12
n
12
VAL
12
D
PRO
13
n
13
PRO
13
D
GLU
14
n
14
GLU
14
D
GLY
15
n
15
GLY
15
D
ALA
16
n
16
ALA
16
D
ILE
17
n
17
ILE
17
D
ALA
18
n
18
ALA
18
D
SER
19
n
19
SER
19
D
LEU
20
n
20
LEU
20
D
ASN
21
n
21
ASN
21
D
CYS
22
n
22
CYS
22
D
THR
23
n
23
THR
23
D
TYR
24
n
24
TYR
24
D
SER
25
n
25
SER
25
D
ASP
26
n
26
ASP
26
D
ARG
27
n
27
ARG
27
D
GLY
28
n
28
GLY
28
D
SER
29
n
29
SER
29
D
GLN
30
n
30
GLN
30
D
SER
31
n
31
SER
31
D
PHE
32
n
32
PHE
32
D
PHE
33
n
33
PHE
33
D
TRP
34
n
34
TRP
34
D
TYR
35
n
35
TYR
35
D
ARG
36
n
36
ARG
36
D
GLN
37
n
37
GLN
37
D
TYR
38
n
38
TYR
38
D
SER
39
n
39
SER
39
D
GLY
40
n
40
GLY
40
D
LYS
41
n
41
LYS
41
D
SER
42
n
42
SER
42
D
PRO
43
n
43
PRO
43
D
GLU
44
n
44
GLU
44
D
LEU
45
n
45
LEU
45
D
ILE
46
n
46
ILE
46
D
MET
47
n
47
MET
47
D
PHE
48
n
48
PHE
48
D
ILE
49
n
49
ILE
49
D
TYR
50
n
50
TYR
50
D
SER
51
n
51
SER
51
D
ASN
52
n
52
ASN
52
D
GLY
53
n
53
GLY
53
D
ASP
54
n
54
ASP
54
D
LYS
55
n
55
LYS
55
D
GLU
56
n
56
GLU
56
D
ASP
57
n
57
ASP
57
D
GLY
58
n
58
GLY
58
D
ARG
59
n
59
ARG
59
D
PHE
60
n
60
PHE
60
D
THR
61
n
61
THR
61
D
ALA
62
n
62
ALA
62
D
GLN
63
n
63
GLN
63
D
LEU
64
n
64
LEU
64
D
ASN
65
n
65
ASN
65
D
LYS
66
n
66
LYS
66
D
ALA
67
n
67
ALA
67
D
SER
68
n
68
SER
68
D
GLN
69
n
69
GLN
69
D
TYR
70
n
70
TYR
70
D
VAL
71
n
71
VAL
71
D
SER
72
n
72
SER
72
D
LEU
73
n
73
LEU
73
D
LEU
74
n
74
LEU
74
D
ILE
75
n
75
ILE
75
D
ARG
76
n
76
ARG
76
D
ASP
77
n
77
ASP
77
D
SER
78
n
78
SER
78
D
GLN
79
n
79
GLN
79
D
PRO
80
n
80
PRO
80
D
SER
81
n
81
SER
81
D
ASP
82
n
82
ASP
82
D
SER
83
n
83
SER
83
D
ALA
84
n
84
ALA
84
D
THR
85
n
85
THR
85
D
TYR
86
n
86
TYR
86
D
LEU
87
n
87
LEU
87
D
CYS
88
n
88
CYS
88
D
ALA
89
n
89
ALA
89
D
VAL
90
n
90
VAL
90
D
ASN
91
n
91
ASN
91
D
PHE
92
n
92
PHE
92
D
GLY
93
n
93
GLY
93
D
GLY
94
n
94
GLY
94
D
GLY
95
n
95
GLY
95
D
LYS
96
n
96
LYS
96
D
LEU
97
n
97
LEU
97
D
ILE
98
n
98
ILE
98
D
PHE
99
n
99
PHE
99
D
GLY
100
n
100
GLY
100
D
GLN
101
n
101
GLN
101
D
GLY
102
n
102
GLY
102
D
THR
103
n
103
THR
103
D
GLU
104
n
104
GLU
104
D
LEU
105
n
105
LEU
105
D
SER
106
n
106
SER
106
D
VAL
107
n
107
VAL
107
D
LYS
108
n
108
LYS
108
D
PRO
109
n
109
PRO
109
D
ASN
110
n
110
ASN
110
D
ILE
111
n
111
ILE
111
D
GLN
112
n
112
GLN
112
D
ASN
113
n
113
ASN
113
D
PRO
114
n
114
PRO
114
D
ASP
115
n
115
ASP
115
D
PRO
116
n
116
PRO
116
D
ALA
117
n
117
ALA
117
D
VAL
118
n
118
VAL
118
D
TYR
119
n
119
TYR
119
D
GLN
120
n
120
GLN
120
D
LEU
121
n
121
LEU
121
D
ARG
122
n
122
ARG
122
D
ASP
123
n
123
ASP
123
D
SER
124
n
124
SER
124
D
LYS
125
n
125
LYS
125
D
SER
126
n
126
SER
126
D
SER
127
n
127
SER
127
D
ASP
128
n
128
ASP
128
D
LYS
129
n
129
LYS
129
D
SER
130
n
130
SER
130
D
VAL
131
n
131
VAL
131
D
CYS
132
n
132
CYS
132
D
LEU
133
n
133
LEU
133
D
PHE
134
n
134
PHE
134
D
THR
135
n
135
THR
135
D
ASP
136
n
136
ASP
136
D
PHE
137
n
137
PHE
137
D
ASP
138
n
138
ASP
138
D
SER
139
n
139
SER
139
D
GLN
140
n
140
GLN
140
D
THR
141
n
141
THR
141
D
ASN
142
n
142
ASN
142
D
VAL
143
n
143
VAL
143
D
SER
144
n
144
SER
144
D
GLN
145
n
145
GLN
145
D
SER
146
n
146
SER
146
D
LYS
147
n
147
LYS
147
D
ASP
148
n
148
ASP
148
D
SER
149
n
149
SER
149
D
ASP
150
n
150
ASP
150
D
VAL
151
n
151
VAL
151
D
TYR
152
n
152
TYR
152
D
ILE
153
n
153
ILE
153
D
THR
154
n
154
THR
154
D
ASP
155
n
155
ASP
155
D
LYS
156
n
156
LYS
156
D
CYS
157
n
157
CYS
157
D
VAL
158
n
158
VAL
158
D
LEU
159
n
159
LEU
159
D
ASP
160
n
160
ASP
160
D
MET
161
n
161
MET
161
D
ARG
162
n
162
ARG
162
D
SER
163
n
163
SER
163
D
MET
164
n
164
MET
164
D
ASP
165
n
165
ASP
165
D
PHE
166
n
166
PHE
166
D
LYS
167
n
167
LYS
167
D
SER
168
n
168
SER
168
D
ASN
169
n
169
ASN
169
D
SER
170
n
170
SER
170
D
ALA
171
n
171
ALA
171
D
VAL
172
n
172
VAL
172
D
ALA
173
n
173
ALA
173
D
TRP
174
n
174
TRP
174
D
SER
175
n
175
SER
175
D
ASN
176
n
176
ASN
176
D
LYS
177
n
177
LYS
177
D
SER
178
n
178
SER
178
D
ASP
179
n
179
ASP
179
D
PHE
180
n
180
PHE
180
D
ALA
181
n
181
ALA
181
D
CYS
182
n
182
CYS
182
D
ALA
183
n
183
ALA
183
D
ASN
184
n
184
ASN
184
D
ALA
185
n
185
ALA
185
D
PHE
186
n
186
PHE
186
D
ASN
187
n
187
ASN
187
D
ASN
188
n
188
ASN
188
D
SER
189
n
189
SER
189
D
ILE
190
n
190
ILE
190
D
ILE
191
n
191
ILE
191
D
PRO
192
n
192
PRO
192
D
GLU
193
n
193
GLU
193
D
ASP
194
n
194
ASP
194
D
THR
195
n
195
THR
195
D
PHE
196
n
196
PHE
196
D
PHE
197
n
197
PHE
197
D
PRO
198
n
198
PRO
198
D
SER
199
n
199
SER
199
D
ILE
4
n
1
ILE
4
E
ALA
5
n
2
ALA
5
E
GLY
6
n
3
GLY
6
E
ILE
7
n
4
ILE
7
E
THR
8
n
5
THR
8
E
GLN
9
n
6
GLN
9
E
ALA
10
n
7
ALA
10
E
PRO
11
n
8
PRO
11
E
THR
12
n
9
THR
12
E
SER
13
n
10
SER
13
E
GLN
14
n
11
GLN
14
E
ILE
15
n
12
ILE
15
E
LEU
16
n
13
LEU
16
E
ALA
17
n
14
ALA
17
E
ALA
18
n
15
ALA
18
E
GLY
19
n
16
GLY
19
E
ARG
20
n
17
ARG
20
E
ARG
21
n
18
ARG
21
E
MET
22
n
19
MET
22
E
THR
23
n
20
THR
23
E
LEU
24
n
21
LEU
24
E
ARG
25
n
22
ARG
25
E
CYS
26
n
23
CYS
26
E
THR
27
n
24
THR
27
E
GLN
28
n
25
GLN
28
E
ASP
29
n
26
ASP
29
E
MET
30
n
27
MET
30
E
ARG
31
n
28
ARG
31
E
HIS
32
n
29
HIS
32
E
ASN
33
n
30
ASN
33
E
ALA
34
n
31
ALA
34
E
MET
35
n
32
MET
35
E
TYR
36
n
33
TYR
36
E
TRP
37
n
34
TRP
37
E
TYR
38
n
35
TYR
38
E
ARG
39
n
36
ARG
39
E
GLN
40
n
37
GLN
40
E
ASP
41
n
38
ASP
41
E
LEU
42
n
39
LEU
42
E
GLY
43
n
40
GLY
43
E
LEU
44
n
41
LEU
44
E
GLY
45
n
42
GLY
45
E
LEU
46
n
43
LEU
46
E
ARG
47
n
44
ARG
47
E
LEU
48
n
45
LEU
48
E
ILE
49
n
46
ILE
49
E
HIS
50
n
47
HIS
50
E
TYR
51
n
48
TYR
51
E
SER
52
n
49
SER
52
E
ASN
53
n
50
ASN
53
E
THR
54
n
51
THR
54
E
ALA
55
n
52
ALA
55
E
GLY
56
n
53
GLY
56
E
THR
57
n
54
THR
57
E
THR
58
n
55
THR
58
E
GLY
59
n
56
GLY
59
E
LYS
60
n
57
LYS
60
E
GLY
61
n
58
GLY
61
E
GLU
62
n
59
GLU
62
E
VAL
63
n
60
VAL
63
E
PRO
64
n
61
PRO
64
E
ASP
65
n
62
ASP
65
E
GLY
66
n
63
GLY
66
E
TYR
67
n
64
TYR
67
E
SER
68
n
65
SER
68
E
VAL
69
n
66
VAL
69
E
SER
70
n
67
SER
70
E
ARG
71
n
68
ARG
71
E
ALA
72
n
69
ALA
72
E
ASN
73
n
70
ASN
73
E
THR
74
n
71
THR
74
E
ASP
75
n
72
ASP
75
E
ASP
76
n
73
ASP
76
E
PHE
77
n
74
PHE
77
E
PRO
78
n
75
PRO
78
E
LEU
79
n
76
LEU
79
E
THR
80
n
77
THR
80
E
LEU
81
n
78
LEU
81
E
ALA
82
n
79
ALA
82
E
SER
83
n
80
SER
83
E
ALA
84
n
81
ALA
84
E
VAL
85
n
82
VAL
85
E
PRO
86
n
83
PRO
86
E
SER
87
n
84
SER
87
E
GLN
88
n
85
GLN
88
E
THR
89
n
86
THR
89
E
SER
90
n
87
SER
90
E
VAL
91
n
88
VAL
91
E
TYR
92
n
89
TYR
92
E
PHE
93
n
90
PHE
93
E
CYS
94
n
91
CYS
94
E
ALA
95
n
92
ALA
95
E
SER
96
n
93
SER
96
E
SER
97
n
94
SER
97
E
LEU
98
n
95
LEU
98
E
SER
99
n
96
SER
99
E
PHE
100
n
97
PHE
100
E
GLY
101
n
98
GLY
101
E
THR
102
n
99
THR
102
E
GLU
103
n
100
GLU
103
E
ALA
104
n
101
ALA
104
E
PHE
105
n
102
PHE
105
E
PHE
106
n
103
PHE
106
E
GLY
107
n
104
GLY
107
E
GLN
108
n
105
GLN
108
E
GLY
109
n
106
GLY
109
E
THR
110
n
107
THR
110
E
ARG
111
n
108
ARG
111
E
LEU
112
n
109
LEU
112
E
THR
113
n
110
THR
113
E
VAL
114
n
111
VAL
114
E
VAL
115
n
112
VAL
115
E
GLU
116
n
113
GLU
116
E
ASP
117
n
114
ASP
117
E
LEU
118
n
115
LEU
118
E
ASN
119
n
116
ASN
119
E
LYS
120
n
117
LYS
120
E
VAL
121
n
118
VAL
121
E
PHE
122
n
119
PHE
122
E
PRO
123
n
120
PRO
123
E
PRO
124
n
121
PRO
124
E
GLU
125
n
122
GLU
125
E
VAL
126
n
123
VAL
126
E
ALA
127
n
124
ALA
127
E
VAL
128
n
125
VAL
128
E
PHE
129
n
126
PHE
129
E
GLU
130
n
127
GLU
130
E
PRO
131
n
128
PRO
131
E
SER
132
n
129
SER
132
E
GLU
133
n
130
GLU
133
E
ALA
134
n
131
ALA
134
E
GLU
135
n
132
GLU
135
E
ILE
136
n
133
ILE
136
E
SER
137
n
134
SER
137
E
HIS
138
n
135
HIS
138
E
THR
139
n
136
THR
139
E
GLN
140
n
137
GLN
140
E
LYS
141
n
138
LYS
141
E
ALA
142
n
139
ALA
142
E
THR
143
n
140
THR
143
E
LEU
144
n
141
LEU
144
E
VAL
145
n
142
VAL
145
E
CYS
146
n
143
CYS
146
E
LEU
147
n
144
LEU
147
E
ALA
148
n
145
ALA
148
E
THR
149
n
146
THR
149
E
GLY
150
n
147
GLY
150
E
PHE
151
n
148
PHE
151
E
TYR
152
n
149
TYR
152
E
PRO
153
n
150
PRO
153
E
ASP
154
n
151
ASP
154
E
HIS
155
n
152
HIS
155
E
VAL
156
n
153
VAL
156
E
GLU
157
n
154
GLU
157
E
LEU
158
n
155
LEU
158
E
SER
159
n
156
SER
159
E
TRP
160
n
157
TRP
160
E
TRP
161
n
158
TRP
161
E
VAL
162
n
159
VAL
162
E
ASN
163
n
160
ASN
163
E
GLY
164
n
161
GLY
164
E
LYS
165
n
162
LYS
165
E
GLU
166
n
163
GLU
166
E
VAL
167
n
164
VAL
167
E
HIS
168
n
165
HIS
168
E
SER
169
n
166
SER
169
E
GLY
170
n
167
GLY
170
E
VAL
171
n
168
VAL
171
E
CYS
172
n
169
CYS
172
E
THR
173
n
170
THR
173
E
ASP
174
n
171
ASP
174
E
PRO
175
n
172
PRO
175
E
GLN
176
n
173
GLN
176
E
PRO
177
n
174
PRO
177
E
LEU
178
n
175
LEU
178
E
LYS
179
n
176
LYS
179
E
GLU
180
n
177
GLU
180
E
GLN
181
n
178
GLN
181
E
PRO
182
n
179
PRO
182
E
ALA
183
n
180
ALA
183
E
LEU
184
n
181
LEU
184
E
ASN
185
n
182
ASN
185
E
ASP
186
n
183
ASP
186
E
SER
187
n
184
SER
187
E
ARG
188
n
185
ARG
188
E
TYR
189
n
186
TYR
189
E
ALA
190
n
187
ALA
190
E
LEU
191
n
188
LEU
191
E
SER
192
n
189
SER
192
E
SER
193
n
190
SER
193
E
ARG
194
n
191
ARG
194
E
LEU
195
n
192
LEU
195
E
ARG
196
n
193
ARG
196
E
VAL
197
n
194
VAL
197
E
SER
198
n
195
SER
198
E
ALA
199
n
196
ALA
199
E
THR
200
n
197
THR
200
E
PHE
201
n
198
PHE
201
E
TRP
202
n
199
TRP
202
E
GLN
203
n
200
GLN
203
E
ASP
204
n
201
ASP
204
E
PRO
205
n
202
PRO
205
E
ARG
206
n
203
ARG
206
E
ASN
207
n
204
ASN
207
E
HIS
208
n
205
HIS
208
E
PHE
209
n
206
PHE
209
E
ARG
210
n
207
ARG
210
E
CYS
211
n
208
CYS
211
E
GLN
212
n
209
GLN
212
E
VAL
213
n
210
VAL
213
E
GLN
214
n
211
GLN
214
E
PHE
215
n
212
PHE
215
E
TYR
216
n
213
TYR
216
E
GLY
217
n
214
GLY
217
E
LEU
218
n
215
LEU
218
E
SER
219
n
216
SER
219
E
GLU
220
n
217
GLU
220
E
ASN
221
n
218
ASN
221
E
ASP
222
n
219
ASP
222
E
GLU
223
n
220
GLU
223
E
TRP
224
n
221
TRP
224
E
THR
225
n
222
THR
225
E
GLN
226
n
223
GLN
226
E
ASP
227
n
224
ASP
227
E
ARG
228
n
225
ARG
228
E
ALA
229
n
226
ALA
229
E
LYS
230
n
227
LYS
230
E
PRO
231
n
228
PRO
231
E
VAL
232
n
229
VAL
232
E
THR
233
n
230
THR
233
E
GLN
234
n
231
GLN
234
E
ILE
235
n
232
ILE
235
E
VAL
236
n
233
VAL
236
E
SER
237
n
234
SER
237
E
ALA
238
n
235
ALA
238
E
GLU
239
n
236
GLU
239
E
ALA
240
n
237
ALA
240
E
TRP
241
n
238
TRP
241
E
GLY
242
n
239
GLY
242
E
ARG
243
n
240
ARG
243
E
ALA
244
n
241
ALA
244
E
ASP
245
n
242
ASP
245
E
2.0194
-0.4231
0.4172
1.2214
0.7542
3.7430
0.0796
0.2049
-0.0973
-0.0295
0.0619
-0.0366
-0.1719
0.3480
-0.1415
0.0934
-0.0308
0.0309
0.1134
-0.1069
0.1216
refined
51.8250
6.8260
76.5540
X-RAY DIFFRACTION
4.0238
-1.4236
0.7687
6.8943
-2.9021
3.4224
0.1520
-0.0296
0.9322
-0.1604
0.2551
0.5376
-0.3819
-0.3280
-0.4070
0.3281
-0.0731
0.1305
0.1630
-0.0217
0.3960
refined
36.2440
21.1410
47.7300
X-RAY DIFFRACTION
3.8302
0.8879
1.8557
2.0531
1.6383
7.6340
0.0852
0.1285
-0.1263
-0.0798
0.2080
0.1381
-0.0277
-0.1867
-0.2933
0.0841
-0.0243
0.0523
0.0481
0.0181
0.0921
refined
29.4070
4.5820
61.6550
X-RAY DIFFRACTION
5.6761
0.2966
1.3707
2.1810
-0.4321
3.3551
0.1721
0.4352
-0.2093
0.0753
-0.0847
-0.3399
0.0662
0.7413
-0.0875
0.1291
-0.0453
0.0386
0.4724
-0.1726
0.1997
refined
80.0380
-0.8270
87.7790
X-RAY DIFFRACTION
4.1901
-0.4418
0.1340
4.4904
-1.7476
4.3131
0.1594
-0.1315
-0.8307
-0.5164
-0.2431
-0.7366
0.6764
0.8463
0.0837
0.5214
0.0506
-0.0480
1.1586
-0.1642
0.9270
refined
100.8850
-17.7410
107.5360
X-RAY DIFFRACTION
3.4971
-1.4834
1.5615
6.5414
-1.9221
3.6461
0.1147
-0.4342
-0.8089
0.5161
0.2566
0.1722
0.1824
-0.0713
-0.3714
0.1303
-0.0731
-0.0026
0.3173
-0.1042
0.3616
refined
62.0170
-10.9170
97.9900
X-RAY DIFFRACTION
5.4458
2.1383
0.9074
3.5399
-0.1628
2.9437
-0.0656
-0.1974
-0.2570
0.0444
0.2135
-0.1110
0.1779
0.0611
-0.1478
0.4238
0.0527
-0.1095
0.7135
-0.1259
0.6351
refined
86.1730
-17.3130
116.1300
X-RAY DIFFRACTION
A
1
A
182
X-RAY DIFFRACTION
1
C
1
C
9
X-RAY DIFFRACTION
1
A
183
A
275
X-RAY DIFFRACTION
2
B
0
B
99
X-RAY DIFFRACTION
3
D
1
D
115
X-RAY DIFFRACTION
4
D
116
D
199
X-RAY DIFFRACTION
5
E
4
E
115
X-RAY DIFFRACTION
6
E
116
E
245
X-RAY DIFFRACTION
7
author_and_software_defined_assembly
PISA
5
pentameric
10950
-56
37700
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
GLU
46
A
O
GLU
46
A
N
ARG
35
A
N
ARG
35
A
O
PHE
33
A
O
PHE
33
A
N
GLY
26
A
N
GLY
26
A
O
TYR
27
A
O
TYR
27
A
N
ARG
6
A
N
ARG
6
A
N
TYR
7
A
N
TYR
7
A
O
TYR
99
A
O
TYR
99
A
N
ASP
102
A
N
ASP
102
A
O
ARG
111
A
O
ARG
111
A
N
HIS
114
A
N
HIS
114
A
O
LEU
126
A
O
LEU
126
A
N
ALA
125
A
N
ALA
125
A
O
THR
134
A
O
THR
134
A
N
HIS
188
A
N
HIS
188
A
O
TRP
204
A
O
TRP
204
A
N
ALA
199
A
N
ALA
199
A
O
VAL
249
A
O
VAL
249
A
O
ALA
246
A
O
ALA
246
A
N
GLU
229
A
N
GLU
229
A
N
HIS
188
A
N
HIS
188
A
O
TRP
204
A
O
TRP
204
A
N
ALA
199
A
N
ALA
199
A
O
VAL
249
A
O
VAL
249
A
O
GLN
242
A
O
GLN
242
A
N
ARG
234
A
N
ARG
234
A
O
GLU
222
A
O
GLU
222
A
N
ARG
219
A
N
ARG
219
A
N
GLN
218
A
N
GLN
218
A
O
THR
258
A
O
THR
258
A
N
CYS
259
A
N
CYS
259
A
O
LEU
272
A
O
LEU
272
B
N
LYS
6
B
N
LYS
7
B
O
SER
28
B
O
SER
29
B
N
PHE
30
B
N
PHE
31
B
O
PHE
62
B
O
PHE
63
B
O
TYR
67
B
O
TYR
68
B
N
GLU
50
B
N
GLU
51
B
N
LYS
6
B
N
LYS
7
B
O
SER
28
B
O
SER
29
B
N
PHE
30
B
N
PHE
31
B
O
PHE
62
B
O
PHE
63
B
O
TYR
63
B
O
TYR
64
B
N
SER
55
B
N
SER
56
B
O
GLU
44
B
O
GLU
45
B
N
LYS
41
B
N
LYS
42
B
N
GLU
36
B
N
GLU
37
B
O
ASN
83
B
O
ASN
84
B
N
VAL
82
B
N
VAL
83
B
O
LYS
91
B
O
LYS
92
D
N
GLU
4
D
N
GLU
4
D
O
THR
23
D
O
THR
23
D
N
ALA
18
D
N
ALA
18
D
O
ILE
75
D
O
ILE
75
D
O
TYR
70
D
O
TYR
70
D
N
ASN
65
D
N
ASN
65
D
O
ALA
62
D
O
ALA
62
D
N
LYS
55
D
N
LYS
55
D
N
LEU
10
D
N
LEU
10
D
O
GLU
104
D
O
GLU
104
D
O
THR
103
D
O
THR
103
D
N
TYR
86
D
N
TYR
86
D
O
LEU
87
D
O
LEU
87
D
N
TYR
35
D
N
TYR
35
D
N
TRP
34
D
N
TRP
34
D
O
ILE
46
D
O
ILE
46
D
N
LEU
10
D
N
LEU
10
D
O
GLU
104
D
O
GLU
104
D
O
THR
103
D
O
THR
103
D
N
TYR
86
D
N
TYR
86
D
N
VAL
90
D
N
VAL
90
D
O
ILE
98
D
O
ILE
98
D
N
TYR
152
D
N
TYR
152
D
O
TRP
174
D
O
TRP
174
D
O
ALA
173
D
O
ALA
173
D
N
CYS
132
D
N
CYS
132
D
O
LEU
133
D
O
LEU
133
D
N
TYR
119
D
N
TYR
119
D
N
ARG
122
D
N
ARG
122
E
O
GLU
130
E
O
GLU
127
E
N
GLU
125
E
N
GLU
122
E
O
THR
149
E
O
THR
146
E
N
PHE
151
E
N
PHE
148
E
O
TYR
189
E
O
TYR
186
E
O
ARG
194
E
O
ARG
191
E
N
CYS
172
E
N
CYS
169
D
N
LEU
159
D
N
LEU
159
D
O
SER
168
D
O
SER
168
D
O
ALA
173
D
O
ALA
173
D
N
CYS
132
D
N
CYS
132
D
O
LEU
133
D
O
LEU
133
D
N
TYR
119
D
N
TYR
119
D
N
ARG
122
D
N
ARG
122
E
O
GLU
130
E
O
GLU
127
E
N
GLU
125
E
N
GLU
122
E
O
THR
149
E
O
THR
146
E
N
PHE
151
E
N
PHE
148
E
O
TYR
189
E
O
TYR
186
E
O
ALA
190
E
O
ALA
187
E
N
LEU
178
E
N
LEU
175
E
N
ALA
10
E
N
ALA
7
E
O
ARG
25
E
O
ARG
22
E
N
LEU
24
E
N
LEU
21
E
O
LEU
79
E
O
LEU
76
E
O
THR
80
E
O
THR
77
E
N
SER
68
E
N
SER
65
E
N
LEU
16
E
N
LEU
13
E
O
VAL
115
E
O
VAL
112
E
O
THR
110
E
O
THR
107
E
N
TYR
92
E
N
TYR
89
E
O
VAL
91
E
O
VAL
88
E
N
GLN
40
E
N
GLN
37
E
N
TRP
37
E
N
TRP
34
E
O
ILE
49
E
O
ILE
46
E
N
TYR
51
E
N
TYR
48
E
O
GLY
59
E
O
GLY
56
E
N
LEU
16
E
N
LEU
13
E
O
VAL
115
E
O
VAL
112
E
O
THR
110
E
O
THR
107
E
N
TYR
92
E
N
TYR
89
E
N
SER
96
E
N
SER
93
E
O
PHE
105
E
O
PHE
102
E
O
LYS
165
E
O
LYS
162
E
N
VAL
162
E
N
VAL
159
E
N
SER
159
E
N
SER
156
E
O
GLN
212
E
O
GLN
209
E
N
PHE
209
E
N
PHE
206
E
O
ALA
240
E
O
ALA
237
1
C
C
GLY
ILE
3
4
145.73
1
-10.40
1.50
119.30
108.90
A
A
A
C
N
CA
ARG
PRO
PRO
14
15
15
Y
1
5.49
0.90
118.30
123.79
A
A
A
CB
CG
OD1
ASP
ASP
ASP
129
129
129
N
1
5.88
0.90
118.30
124.18
B
B
B
CB
CG
OD1
ASP
ASP
ASP
59
59
59
N
1
A
ARG
17
-59.85
109.31
1
A
ASP
29
51.21
-115.16
1
A
SER
88
-69.23
-179.33
1
A
TYR
123
-112.57
-70.26
1
A
GLN
226
-68.42
-92.25
1
B
ILE
35
-171.14
142.03
1
B
TRP
60
91.12
-8.75
1
D
SER
83
-59.77
95.12
1
D
SER
126
71.88
-179.93
1
D
LYS
147
-104.32
-71.71
1
D
ASN
176
-65.47
-73.22
1
D
LYS
177
-171.94
127.59
1
D
SER
178
-148.76
-137.34
1
D
ASP
179
-101.90
41.69
1
D
ALA
185
-142.53
-49.58
1
D
PHE
186
-98.31
53.90
1
D
PRO
192
-64.61
-171.47
1
D
PHE
197
-110.20
78.76
1
E
ALA
82
-74.35
-85.28
1
E
SER
90
-170.52
-177.53
1
E
ASP
154
-91.64
37.40
1
E
PRO
182
-69.54
74.18
1
E
ALA
183
-150.02
-143.69
1
E
ASN
185
60.51
178.12
1
E
GLN
226
-94.03
-151.90
68.750
84.271
2.100
-5.9400
0.0000
1.4700
5.2900
0.0000
1.4900
0.9400
0.9000
U VALUES RESIDUAL ONLY
0.2991
0.2404
0.2435
0.2435
2.3000
20.0000
1887
38804
37477
5.0000
96.5800
0.2987
0.2439
1.000
0.500
0.7284
27.6090
0.2910
0.4884
0.3056
RANDOM, 5%
1
THROUGHOUT
0.000
MOLECULAR REPLACEMENT
0.3060
0.8000
0.8000
1.4000
PDB entry 2GJ6
Engh & Huber
BABINET MODEL WITH MASK
2.3000
20.0000
48
6632
0
0
6584
0.012
0.021
6777
1.562
1.932
9208
7.780
5.000
823
36.205
23.721
344
20.663
15.000
1088
18.703
15.000
50
0.110
0.200
967
0.007
0.021
5307
0.473
1.500
4118
0.871
2.000
6640
1.473
3.000
2659
2.355
4.500
2566
0.3900
0.3380
2.3560
110
2086
2196
20
79.5100
2.300
20.000
3QDJ
38660
37500
1
1
0.071
1.133
1
19.1
3.600
97.000
0.410
2.300
2.340
1538
0.935
1
2.800
81.500
0.437
2.340
2.380
1713
0.942
1
3.200
88.700
0.421
2.380
2.430
1755
1.033
1
3.300
90.700
0.395
2.430
2.480
1773
1.088
1
3.400
94.600
0.377
2.480
2.530
1877
1.064
1
3.500
97.100
0.324
2.530
2.590
1908
1.059
1
3.600
99.700
0.280
2.590
2.650
1892
1.106
1
3.700
100.000
0.244
2.650
2.730
1952
1.072
1
3.700
100.000
0.191
2.730
2.810
1900
1.138
1
3.800
99.900
0.166
2.810
2.900
1936
1.083
1
3.800
100.000
0.129
2.900
3.000
1906
1.066
1
3.800
100.000
0.109
3.000
3.120
1949
1.210
1
3.800
100.000
0.086
3.120
3.260
1930
1.167
1
3.700
100.000
0.074
3.260
3.430
1934
1.265
1
3.700
99.900
0.058
3.430
3.650
1924
1.268
1
3.700
99.700
0.052
3.650
3.930
1943
1.232
1
3.700
99.400
0.052
3.930
4.320
1917
1.208
1
3.600
98.500
0.053
4.320
4.930
1894
1.296
1
3.400
97.000
0.048
4.930
6.180
1922
1.080
1
3.500
97.400
0.048
6.180
20.000
1937
1.176
1
3.300
94.600
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
program
phasing
Alexei Vaguine
alexei@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/molrep.html
MOLREP
program
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
data extraction
PDB
deposit@deposit.rcsb.org
June 10, 2010
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.10
data collection
SBC-Collect
data reduction
HKL-2000
data scaling
HKL-2000
The complex between TCR DMF5 and human Class I MHC HLA-A2 with the bound MART-1(27-35) nonameric peptide
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
6
N
N
6
N
N
6
N
N
6
N
N
A
ALA
49
A
ALA
49
HELX_P
A
GLU
53
A
GLU
53
5
1
5
A
GLY
56
A
GLY
56
HELX_P
A
TYR
85
A
TYR
85
1
2
30
A
ASP
137
A
ASP
137
HELX_P
A
ALA
150
A
ALA
150
1
3
14
A
HIS
151
A
HIS
151
HELX_P
A
GLY
162
A
GLY
162
1
4
12
A
GLY
162
A
GLY
162
HELX_P
A
GLY
175
A
GLY
175
1
5
14
A
GLY
175
A
GLY
175
HELX_P
A
GLN
180
A
GLN
180
1
6
6
A
GLN
253
A
GLN
253
HELX_P
A
GLN
255
A
GLN
255
5
7
3
D
GLN
79
D
GLN
79
HELX_P
D
SER
83
D
SER
83
5
8
5
E
VAL
85
E
VAL
82
HELX_P
E
THR
89
E
THR
86
5
9
5
E
ASP
117
E
ASP
114
HELX_P
E
VAL
121
E
VAL
118
5
10
5
E
SER
132
E
SER
129
HELX_P
E
GLN
140
E
GLN
137
1
11
9
E
ALA
199
E
ALA
196
HELX_P
E
ASP
204
E
ASP
201
1
12
6
disulf
2.069
A
CYS
101
A
SG
CYS
101
1_555
A
CYS
164
A
SG
CYS
164
1_555
disulf
2.035
A
CYS
203
A
SG
CYS
203
1_555
A
CYS
259
A
SG
CYS
259
1_555
disulf
1.980
B
CYS
25
B
SG
CYS
26
1_555
B
CYS
80
B
SG
CYS
81
1_555
disulf
2.039
D
CYS
22
D
SG
CYS
22
1_555
D
CYS
88
D
SG
CYS
88
1_555
disulf
2.045
D
CYS
132
D
SG
CYS
132
1_555
D
CYS
182
D
SG
CYS
182
1_555
disulf
2.046
D
CYS
157
D
SG
CYS
157
1_555
E
CYS
172
E
SG
CYS
169
1_555
disulf
2.021
E
CYS
26
E
SG
CYS
23
1_555
E
CYS
94
E
SG
CYS
91
1_555
disulf
2.025
E
CYS
146
E
SG
CYS
143
1_555
E
CYS
211
E
SG
CYS
208
1_555
IMMUNE SYSTEM
MART-1 peptide, nonapeptide, MHC class I, HLA-A2, TCR DMF5, TCR DMF4, cross-reactivity, cancer, melanoma, IMMUNE SYSTEM
A
TYR
209
A
TYR
209
1
A
PRO
210
A
PRO
210
4.09
B
HIS
31
B
HIS
32
1
B
PRO
32
B
PRO
33
-0.55
D
GLY
8
D
GLY
8
1
D
PRO
9
D
PRO
9
11.20
E
ALA
10
E
ALA
7
1
E
PRO
11
E
PRO
8
-6.16
E
TYR
152
E
TYR
149
1
E
PRO
153
E
PRO
150
-1.27
1A02_HUMAN
UNP
1
25
P01892
GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGT
LRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYL
EGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGT
FQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE
B2MG_HUMAN
UNP
2
21
P61769
IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYAC
RVNHVTLSQPKIVKWDRDM
3QDJ
PDB
3
3QDJ
3QDJ
PDB
4
3QDJ
3QDJ
PDB
5
3QDJ
25
299
3QDJ
1
275
P01892
A
1
1
275
21
119
3QDJ
1
99
P61769
B
2
2
100
1
9
3QDJ
1
9
3QDJ
C
3
1
9
1
199
3QDJ
1
199
3QDJ
D
4
1
199
4
245
3QDJ
4
245
3QDJ
E
5
1
242
2
initiating methionine
MET
0
3QDJ
B
P61769
UNP
1
8
4
4
4
4
4
4
5
5
4
8
8
4
6
4
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
46
A
GLU
46
A
PRO
47
A
PRO
47
A
THR
31
A
THR
31
A
ASP
37
A
ASP
37
A
ARG
21
A
ARG
21
A
VAL
28
A
VAL
28
A
HIS
3
A
HIS
3
A
VAL
12
A
VAL
12
A
THR
94
A
THR
94
A
VAL
103
A
VAL
103
A
PHE
109
A
PHE
109
A
TYR
118
A
TYR
118
A
LYS
121
A
LYS
121
A
LEU
126
A
LEU
126
A
TRP
133
A
TRP
133
A
ALA
135
A
ALA
135
A
LYS
186
A
LYS
186
A
ALA
193
A
ALA
193
A
GLU
198
A
GLU
198
A
PHE
208
A
PHE
208
A
PHE
241
A
PHE
241
A
PRO
250
A
PRO
250
A
GLU
229
A
GLU
229
A
LEU
230
A
LEU
230
A
LYS
186
A
LYS
186
A
ALA
193
A
ALA
193
A
GLU
198
A
GLU
198
A
PHE
208
A
PHE
208
A
PHE
241
A
PHE
241
A
PRO
250
A
PRO
250
A
ARG
234
A
ARG
234
A
PRO
235
A
PRO
235
A
GLU
222
A
GLU
222
A
ASP
223
A
ASP
223
A
THR
214
A
THR
214
A
ARG
219
A
ARG
219
A
TYR
257
A
TYR
257
A
GLN
262
A
GLN
262
A
LEU
270
A
LEU
270
A
LEU
272
A
LEU
272
B
LYS
6
B
LYS
7
B
SER
11
B
SER
12
B
ASN
21
B
ASN
22
B
PHE
30
B
PHE
31
B
PHE
62
B
PHE
63
B
PHE
70
B
PHE
71
B
GLU
50
B
GLU
51
B
HIS
51
B
HIS
52
B
LYS
6
B
LYS
7
B
SER
11
B
SER
12
B
ASN
21
B
ASN
22
B
PHE
30
B
PHE
31
B
PHE
62
B
PHE
63
B
PHE
70
B
PHE
71
B
SER
55
B
SER
56
B
PHE
56
B
PHE
57
B
GLU
44
B
GLU
45
B
ARG
45
B
ARG
46
B
GLU
36
B
GLU
37
B
LYS
41
B
LYS
42
B
TYR
78
B
TYR
79
B
ASN
83
B
ASN
84
B
LYS
91
B
LYS
92
B
LYS
94
B
LYS
95
D
VAL
3
D
VAL
3
D
GLN
5
D
GLN
5
D
ALA
18
D
ALA
18
D
TYR
24
D
TYR
24
D
TYR
70
D
TYR
70
D
ILE
75
D
ILE
75
D
PHE
60
D
PHE
60
D
ASN
65
D
ASN
65
D
GLY
53
D
GLY
53
D
ASP
57
D
ASP
57
D
LEU
10
D
LEU
10
D
PRO
13
D
PRO
13
D
THR
103
D
THR
103
D
LYS
108
D
LYS
108
D
THR
85
D
THR
85
D
ASN
91
D
ASN
91
D
PHE
32
D
PHE
32
D
GLN
37
D
GLN
37
D
GLU
44
D
GLU
44
D
ILE
49
D
ILE
49
D
LEU
10
D
LEU
10
D
PRO
13
D
PRO
13
D
THR
103
D
THR
103
D
LYS
108
D
LYS
108
D
THR
85
D
THR
85
D
ASN
91
D
ASN
91
D
LEU
97
D
LEU
97
D
PHE
99
D
PHE
99
D
TYR
152
D
TYR
152
D
ILE
153
D
ILE
153
D
PHE
166
D
PHE
166
D
TRP
174
D
TRP
174
D
SER
130
D
SER
130
D
THR
135
D
THR
135
D
ALA
117
D
ALA
117
D
ASP
123
D
ASP
123
E
GLU
125
E
GLU
122
E
GLU
130
E
GLU
127
E
LYS
141
E
LYS
138
E
PHE
151
E
PHE
148
E
TYR
189
E
TYR
186
E
SER
198
E
SER
195
E
VAL
171
E
VAL
168
E
THR
173
E
THR
170
D
CYS
157
D
CYS
157
D
MET
161
D
MET
161
D
PHE
166
D
PHE
166
D
TRP
174
D
TRP
174
D
SER
130
D
SER
130
D
THR
135
D
THR
135
D
ALA
117
D
ALA
117
D
ASP
123
D
ASP
123
E
GLU
125
E
GLU
122
E
GLU
130
E
GLU
127
E
LYS
141
E
LYS
138
E
PHE
151
E
PHE
148
E
TYR
189
E
TYR
186
E
SER
198
E
SER
195
E
LEU
178
E
LEU
175
E
LYS
179
E
LYS
176
E
ILE
7
E
ILE
4
E
ALA
10
E
ALA
7
E
MET
22
E
MET
19
E
GLN
28
E
GLN
25
E
LEU
79
E
LEU
76
E
LEU
81
E
LEU
78
E
TYR
67
E
TYR
64
E
VAL
69
E
VAL
66
E
SER
13
E
SER
10
E
ALA
17
E
ALA
14
E
THR
110
E
THR
107
E
VAL
115
E
VAL
112
E
SER
90
E
SER
87
E
SER
97
E
SER
94
E
ALA
34
E
ALA
31
E
ASP
41
E
ASP
38
E
GLY
45
E
GLY
42
E
SER
52
E
SER
49
E
GLY
59
E
GLY
56
E
LYS
60
E
LYS
57
E
SER
13
E
SER
10
E
ALA
17
E
ALA
14
E
THR
110
E
THR
107
E
VAL
115
E
VAL
112
E
SER
90
E
SER
87
E
SER
97
E
SER
94
E
PHE
105
E
PHE
102
E
PHE
106
E
PHE
103
E
LYS
165
E
LYS
162
E
GLU
166
E
GLU
163
E
VAL
156
E
VAL
153
E
VAL
162
E
VAL
159
E
PHE
209
E
PHE
206
E
PHE
215
E
PHE
212
E
GLN
234
E
GLN
231
E
ALA
240
E
ALA
237
5
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