0.014661 0.000000 0.000000 0.000000 0.009044 0.000000 0.000000 0.000000 0.008270 0.00000 0.00000 0.00000 Russo Krauss, I. Merlino, A. Mazzarella, L. Sica, F. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 68.208 110.574 120.916 C21 H34 Cl N6 O3 1 453.986 D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide PPACK peptide-like C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking K 1 39.098 POTASSIUM ION non-polymer C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Na 1 22.990 SODIUM ION non-polymer C8 H15 N O6 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose D-saccharide, beta linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK Nucleic Acids Res. NARHAD 0389 0305-1048 39 7858 7867 10.1093/nar/gkr522 21715374 Thrombin-aptamer recognition: a revealed ambiguity. 2011 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 mirrors CCD 2009-04-07 RIGAKU SATURN 944+ GRAPHITE SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU MICROMAX-007 HF 29780.219 Thrombin heavy chain 3.4.21.5 1 man polymer 4096.534 Thrombin light chain 3.4.21.5 1 man polymer 4743.051 modified thrombin binding DNA aptamer 1 syn polymer 453.986 D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide 1 syn non-polymer 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose 1 man non-polymer 22.990 SODIUM ION 1 syn non-polymer 39.098 POTASSIUM ION 1 syn non-polymer 18.015 water 251 nat water no no IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE H polypeptide(L) no no TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR L polypeptide(L) no no (DG)(DG)(DT)(DT)(DG)(DG)(DT)(DG)(DT)(DG)(DG)(DT)(DT)(DG)(DG) GGTTGGTGTGGTTGG D polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample F2 9606 Homo sapiens 562 Escherichia coli human sample F2 9606 Homo sapiens 562 Escherichia coli 1 2.95 58.33 VAPOR DIFFUSION, SITTING DROP 5.8 20% w/v PEG 20000, 0.2M ammonium sulfate, 3% n-propanol, 0.1 M sodium acetate pH 5.8, VAPOR DIFFUSION, SITTING DROP, temperature 293K 293 -3.254 3 6 D 1 D 15 88.529 D_DG1:DG15_D 1 11.069 -1.713 0.262 -3.373 21.319 3 6 D 6 D 10 -85.218 D_DG6:DG10_D 2 -7.444 1.939 -0.657 3.301 1.438 3 6 D 14 D 11 -93.283 D_DG14:DG11_D 3 -16.173 1.683 0.001 3.116 -0.112 179.360 D D 1 6 -0.706 D D 15 10 -0.112 -1.412 -1.769 -3.294 DD_DG1DG6:DG10DG15_DD 1 4.948 -2.474 179.359 -1.647 0.885 -0.324 178.267 D D 6 14 -26.196 D D 10 11 0.589 -52.067 -1.463 -2.652 DD_DG6DG14:DG11DG10_DD 2 170.315 -85.691 48.889 -1.301 0.813 chem_comp entity pdbx_chem_comp_identifier pdbx_entity_nonpoly pdbx_struct_conn_angle pdbx_unobs_or_zero_occ_atoms pdbx_validate_polymer_linkage struct_conn struct_site struct_site_gen repository Initial release Carbohydrate remediation repository Remediation Other Advisory Data collection Derived calculations Structure summary 1 0 2011-10-19 1 1 2013-02-27 1 2 2020-07-29 _chem_comp.name _chem_comp.type _entity.pdbx_description _pdbx_entity_nonpoly.name _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_role _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id DGlcpNAcb N-acetyl-b-D-glucopyranosamine b-D-GlcpNAc GlcNAc RCSB Y PDBJ 2011-02-03 REL REL 0G6 D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide NAG 2-acetamido-2-deoxy-beta-D-glucopyranose NA SODIUM ION K POTASSIUM ION HOH water BECAUSE OF THE PRESENCE OF THE POLARITY INVERSION SITE IN MTBA, SOME RESIDUE HAVE UNUSUAL LINKAGES. IN PARTICULAR RESIDUE D DG 2 IS LINKED TO THE P ATOM OF RESIDUE D DG 1 BY ITS O3' ATOM, AND RESIDUE D DT 3 IS LINKED TO RESIDUE D DT 4 BY ITS O5' ATOM. THE PHOSPHATE GROUP OF RESIDUE D DT 3 IS MISSING DUE TO THE 5'-3' INVERSION OF THIS STRAND. Inhibitor D-Phe-Pro-Arg-CH2Cl Peptide-like 0G6 1 4 0G6 0G6 1 H NAG 1 5 NAG NAG 248 H NA 601 6 NA NA 601 H K 602 7 K K 602 D HOH 1018 8 HOH HOH 1018 H HOH 1019 8 HOH HOH 1019 H HOH 1020 8 HOH HOH 1020 H HOH 1021 8 HOH HOH 1021 H HOH 1023 8 HOH HOH 1023 H HOH 1024 8 HOH HOH 1024 H HOH 1025 8 HOH HOH 1025 H HOH 1026 8 HOH HOH 1026 H HOH 1027 8 HOH HOH 1027 H HOH 1028 8 HOH HOH 1028 H HOH 1029 8 HOH HOH 1029 H HOH 1031 8 HOH HOH 1031 H HOH 1032 8 HOH HOH 1032 H HOH 1034 8 HOH HOH 1034 H HOH 1038 8 HOH HOH 1038 H HOH 1039 8 HOH HOH 1039 H HOH 1040 8 HOH HOH 1040 H HOH 1042 8 HOH HOH 1042 H HOH 1043 8 HOH HOH 1043 H HOH 1044 8 HOH HOH 1044 H HOH 1045 8 HOH HOH 1045 H HOH 1046 8 HOH HOH 1046 H HOH 1047 8 HOH HOH 1047 H HOH 1048 8 HOH HOH 1048 H HOH 1049 8 HOH HOH 1049 H HOH 1050 8 HOH HOH 1050 H HOH 1053 8 HOH HOH 1053 H HOH 1054 8 HOH HOH 1054 H HOH 1055 8 HOH HOH 1055 H HOH 1056 8 HOH HOH 1056 H HOH 1057 8 HOH HOH 1057 H HOH 1061 8 HOH HOH 1061 H HOH 1063 8 HOH HOH 1063 H HOH 1064 8 HOH HOH 1064 H HOH 1066 8 HOH HOH 1066 H HOH 1068 8 HOH HOH 1068 H HOH 1069 8 HOH HOH 1069 H HOH 1070 8 HOH HOH 1070 H HOH 1071 8 HOH HOH 1071 H HOH 1073 8 HOH HOH 1073 H HOH 1075 8 HOH HOH 1075 H HOH 1076 8 HOH HOH 1076 H HOH 1077 8 HOH HOH 1077 H HOH 1078 8 HOH HOH 1078 H HOH 1079 8 HOH HOH 1079 H HOH 1080 8 HOH HOH 1080 H HOH 1081 8 HOH HOH 1081 H HOH 1082 8 HOH HOH 1082 H HOH 1083 8 HOH HOH 1083 H HOH 1084 8 HOH HOH 1084 H HOH 1085 8 HOH HOH 1085 H HOH 1086 8 HOH HOH 1086 H HOH 1089 8 HOH HOH 1089 H HOH 1090 8 HOH HOH 1090 H HOH 1092 8 HOH HOH 1092 H HOH 1094 8 HOH HOH 1094 H HOH 1095 8 HOH HOH 1095 H HOH 1096 8 HOH HOH 1096 H HOH 1097 8 HOH HOH 1097 H HOH 1098 8 HOH HOH 1098 H HOH 1099 8 HOH HOH 1099 H HOH 1101 8 HOH HOH 1101 H HOH 1102 8 HOH HOH 1102 H HOH 1103 8 HOH HOH 1103 H HOH 1104 8 HOH HOH 1104 H HOH 1105 8 HOH HOH 1105 H HOH 1106 8 HOH HOH 1106 H HOH 1107 8 HOH HOH 1107 H HOH 1108 8 HOH HOH 1108 H HOH 1109 8 HOH HOH 1109 H HOH 1110 8 HOH HOH 1110 H HOH 1111 8 HOH HOH 1111 H HOH 1112 8 HOH HOH 1112 H HOH 1113 8 HOH HOH 1113 H HOH 1114 8 HOH HOH 1114 H HOH 1115 8 HOH HOH 1115 H HOH 1116 8 HOH HOH 1116 H HOH 1117 8 HOH HOH 1117 H HOH 1118 8 HOH HOH 1118 H HOH 1119 8 HOH HOH 1119 H HOH 1120 8 HOH HOH 1120 H HOH 1121 8 HOH HOH 1121 H HOH 1122 8 HOH HOH 1122 H HOH 1123 8 HOH HOH 1123 H HOH 1124 8 HOH HOH 1124 H HOH 1125 8 HOH HOH 1125 H HOH 1127 8 HOH HOH 1127 H HOH 1128 8 HOH HOH 1128 H HOH 1129 8 HOH HOH 1129 H HOH 1130 8 HOH HOH 1130 H HOH 1131 8 HOH HOH 1131 H HOH 1133 8 HOH HOH 1133 H HOH 1134 8 HOH HOH 1134 H HOH 1137 8 HOH HOH 1137 H HOH 1138 8 HOH HOH 1138 H HOH 1140 8 HOH HOH 1140 H HOH 1141 8 HOH HOH 1141 H HOH 1142 8 HOH HOH 1142 H HOH 1143 8 HOH HOH 1143 H HOH 1146 8 HOH HOH 1146 H HOH 1147 8 HOH HOH 1147 H HOH 1148 8 HOH HOH 1148 H HOH 1149 8 HOH HOH 1149 H HOH 1150 8 HOH HOH 1150 H HOH 1151 8 HOH HOH 1151 H HOH 1152 8 HOH HOH 1152 H HOH 1153 8 HOH HOH 1153 H HOH 1154 8 HOH HOH 1154 H HOH 1156 8 HOH HOH 1156 H HOH 1157 8 HOH HOH 1157 H HOH 1158 8 HOH HOH 1158 H HOH 1161 8 HOH HOH 1161 H HOH 1162 8 HOH HOH 1162 H HOH 1163 8 HOH HOH 1163 H HOH 1164 8 HOH HOH 1164 H HOH 1166 8 HOH HOH 1166 H HOH 1170 8 HOH HOH 1170 H HOH 1171 8 HOH HOH 1171 H HOH 1173 8 HOH HOH 1173 H HOH 1176 8 HOH HOH 1176 H HOH 1178 8 HOH HOH 1178 H HOH 1181 8 HOH HOH 1181 H HOH 1182 8 HOH HOH 1182 H HOH 1183 8 HOH HOH 1183 H HOH 1184 8 HOH HOH 1184 H HOH 1185 8 HOH HOH 1185 H HOH 1187 8 HOH HOH 1187 H HOH 1189 8 HOH HOH 1189 H HOH 1192 8 HOH HOH 1192 H HOH 1193 8 HOH HOH 1193 H HOH 1194 8 HOH HOH 1194 H HOH 1195 8 HOH HOH 1195 H HOH 1196 8 HOH HOH 1196 H HOH 1198 8 HOH HOH 1198 H HOH 1199 8 HOH HOH 1199 H HOH 1201 8 HOH HOH 1201 H HOH 1202 8 HOH HOH 1202 H HOH 1204 8 HOH HOH 1204 H HOH 1205 8 HOH HOH 1205 H HOH 1207 8 HOH HOH 1207 H HOH 1208 8 HOH HOH 1208 H HOH 1209 8 HOH HOH 1209 H HOH 1211 8 HOH HOH 1211 H HOH 1213 8 HOH HOH 1213 H HOH 1214 8 HOH HOH 1214 H HOH 1215 8 HOH HOH 1215 H HOH 1216 8 HOH HOH 1216 H HOH 1218 8 HOH HOH 1218 H HOH 1219 8 HOH HOH 1219 H HOH 1221 8 HOH HOH 1221 H HOH 1222 8 HOH HOH 1222 H HOH 1224 8 HOH HOH 1224 H HOH 1227 8 HOH HOH 1227 H HOH 1228 8 HOH HOH 1228 H HOH 1229 8 HOH HOH 1229 H HOH 1230 8 HOH HOH 1230 H HOH 1232 8 HOH HOH 1232 H HOH 1233 8 HOH HOH 1233 H HOH 1234 8 HOH HOH 1234 H HOH 1235 8 HOH HOH 1235 H HOH 1236 8 HOH HOH 1236 H HOH 1237 8 HOH HOH 1237 H HOH 1238 8 HOH HOH 1238 H HOH 1240 8 HOH HOH 1240 H HOH 1241 8 HOH HOH 1241 H HOH 1242 8 HOH HOH 1242 H HOH 1243 8 HOH HOH 1243 H HOH 1244 8 HOH HOH 1244 H HOH 1245 8 HOH HOH 1245 H HOH 1247 8 HOH HOH 1247 H HOH 1248 8 HOH HOH 1248 H HOH 1249 8 HOH HOH 1249 H HOH 1251 8 HOH HOH 1251 H HOH 1252 8 HOH HOH 1252 H HOH 1253 8 HOH HOH 1253 H HOH 1254 8 HOH HOH 1254 H HOH 1255 8 HOH HOH 1255 H HOH 1256 8 HOH HOH 1256 H HOH 1258 8 HOH HOH 1258 H HOH 1259 8 HOH HOH 1259 H HOH 1033 8 HOH HOH 1033 L HOH 1035 8 HOH HOH 1035 L HOH 1051 8 HOH HOH 1051 L HOH 1060 8 HOH HOH 1060 L HOH 1087 8 HOH HOH 1087 L HOH 1091 8 HOH HOH 1091 L HOH 1144 8 HOH HOH 1144 L HOH 1155 8 HOH HOH 1155 L HOH 1159 8 HOH HOH 1159 L HOH 1160 8 HOH HOH 1160 L HOH 1167 8 HOH HOH 1167 L HOH 1169 8 HOH HOH 1169 L HOH 1172 8 HOH HOH 1172 L HOH 1175 8 HOH HOH 1175 L HOH 1186 8 HOH HOH 1186 L HOH 1190 8 HOH HOH 1190 L HOH 1191 8 HOH HOH 1191 L HOH 1197 8 HOH HOH 1197 L HOH 1200 8 HOH HOH 1200 L HOH 1206 8 HOH HOH 1206 L HOH 1217 8 HOH HOH 1217 L HOH 1225 8 HOH HOH 1225 L HOH 1226 8 HOH HOH 1226 L HOH 1239 8 HOH HOH 1239 L HOH 1260 8 HOH HOH 1260 L HOH 1262 8 HOH HOH 1262 L HOH 1022 8 HOH HOH 1022 D HOH 1030 8 HOH HOH 1030 D HOH 1036 8 HOH HOH 1036 D HOH 1037 8 HOH HOH 1037 D HOH 1041 8 HOH HOH 1041 D HOH 1052 8 HOH HOH 1052 D HOH 1058 8 HOH HOH 1058 D HOH 1059 8 HOH HOH 1059 D HOH 1062 8 HOH HOH 1062 D HOH 1065 8 HOH HOH 1065 D HOH 1067 8 HOH HOH 1067 D HOH 1072 8 HOH HOH 1072 D HOH 1074 8 HOH HOH 1074 D HOH 1088 8 HOH HOH 1088 D HOH 1093 8 HOH HOH 1093 D HOH 1100 8 HOH HOH 1100 D HOH 1126 8 HOH HOH 1126 D HOH 1132 8 HOH HOH 1132 D HOH 1135 8 HOH HOH 1135 D HOH 1136 8 HOH HOH 1136 D HOH 1139 8 HOH HOH 1139 D HOH 1145 8 HOH HOH 1145 D HOH 1165 8 HOH HOH 1165 D HOH 1168 8 HOH HOH 1168 D HOH 1174 8 HOH HOH 1174 D HOH 1177 8 HOH HOH 1177 D HOH 1179 8 HOH HOH 1179 D HOH 1180 8 HOH HOH 1180 D HOH 1188 8 HOH HOH 1188 D HOH 1203 8 HOH HOH 1203 D HOH 1210 8 HOH HOH 1210 D HOH 1212 8 HOH HOH 1212 D HOH 1220 8 HOH HOH 1220 D HOH 1223 8 HOH HOH 1223 D HOH 1231 8 HOH HOH 1231 D HOH 1246 8 HOH HOH 1246 D HOH 1250 8 HOH HOH 1250 D HOH 1257 8 HOH HOH 1257 D HOH 1261 8 HOH HOH 1261 D HOH 1264 8 HOH HOH 1264 D HOH 1265 8 HOH HOH 1265 D HOH 1266 8 HOH HOH 1266 D HOH 1267 8 HOH HOH 1267 D HOH 1268 8 HOH HOH 1268 D HOH 1269 8 HOH HOH 1269 D ILE 16 n 1 ILE 16 H VAL 17 n 2 VAL 17 H GLU 18 n 3 GLU 18 H GLY 19 n 4 GLY 19 H SER 20 n 5 SER 20 H ASP 21 n 6 ASP 21 H ALA 22 n 7 ALA 22 H GLU 23 n 8 GLU 23 H ILE 24 n 9 ILE 24 H GLY 25 n 10 GLY 25 H MET 26 n 11 MET 26 H SER 27 n 12 SER 27 H PRO 28 n 13 PRO 28 H TRP 29 n 14 TRP 29 H GLN 30 n 15 GLN 30 H VAL 31 n 16 VAL 31 H MET 32 n 17 MET 32 H LEU 33 n 18 LEU 33 H PHE 34 n 19 PHE 34 H ARG 35 n 20 ARG 35 H LYS 36 n 21 LYS 36 H SER 36 n 22 A SER 36 H PRO 37 n 23 PRO 37 H GLN 38 n 24 GLN 38 H GLU 39 n 25 GLU 39 H LEU 40 n 26 LEU 40 H LEU 41 n 27 LEU 41 H CYS 42 n 28 CYS 42 H GLY 43 n 29 GLY 43 H ALA 44 n 30 ALA 44 H SER 45 n 31 SER 45 H LEU 46 n 32 LEU 46 H ILE 47 n 33 ILE 47 H SER 48 n 34 SER 48 H ASP 49 n 35 ASP 49 H ARG 50 n 36 ARG 50 H TRP 51 n 37 TRP 51 H VAL 52 n 38 VAL 52 H LEU 53 n 39 LEU 53 H THR 54 n 40 THR 54 H ALA 55 n 41 ALA 55 H ALA 56 n 42 ALA 56 H HIS 57 n 43 HIS 57 H CYS 58 n 44 CYS 58 H LEU 59 n 45 LEU 59 H LEU 60 n 46 LEU 60 H TYR 60 n 47 A TYR 60 H PRO 60 n 48 B PRO 60 H PRO 60 n 49 C PRO 60 H TRP 60 n 50 D TRP 60 H ASP 60 n 51 E ASP 60 H LYS 60 n 52 F LYS 60 H ASN 60 n 53 G ASN 60 H PHE 60 n 54 H PHE 60 H THR 60 n 55 I THR 60 H GLU 61 n 56 GLU 61 H ASN 62 n 57 ASN 62 H ASP 63 n 58 ASP 63 H LEU 64 n 59 LEU 64 H LEU 65 n 60 LEU 65 H VAL 66 n 61 VAL 66 H ARG 67 n 62 ARG 67 H ILE 68 n 63 ILE 68 H GLY 69 n 64 GLY 69 H LYS 70 n 65 LYS 70 H HIS 71 n 66 HIS 71 H SER 72 n 67 SER 72 H ARG 73 n 68 ARG 73 H THR 74 n 69 THR 74 H ARG 75 n 70 ARG 75 H TYR 76 n 71 TYR 76 H GLU 77 n 72 GLU 77 H ARG 77 n 73 A ARG 77 H ASN 78 n 74 ASN 78 H ILE 79 n 75 ILE 79 H GLU 80 n 76 GLU 80 H LYS 81 n 77 LYS 81 H ILE 82 n 78 ILE 82 H SER 83 n 79 SER 83 H MET 84 n 80 MET 84 H LEU 85 n 81 LEU 85 H GLU 86 n 82 GLU 86 H LYS 87 n 83 LYS 87 H ILE 88 n 84 ILE 88 H TYR 89 n 85 TYR 89 H ILE 90 n 86 ILE 90 H HIS 91 n 87 HIS 91 H PRO 92 n 88 PRO 92 H ARG 93 n 89 ARG 93 H TYR 94 n 90 TYR 94 H ASN 95 n 91 ASN 95 H TRP 96 n 92 TRP 96 H ARG 97 n 93 ARG 97 H GLU 97 n 94 A GLU 97 H ASN 98 n 95 ASN 98 H LEU 99 n 96 LEU 99 H ASP 100 n 97 ASP 100 H ARG 101 n 98 ARG 101 H ASP 102 n 99 ASP 102 H ILE 103 n 100 ILE 103 H ALA 104 n 101 ALA 104 H LEU 105 n 102 LEU 105 H MET 106 n 103 MET 106 H LYS 107 n 104 LYS 107 H LEU 108 n 105 LEU 108 H LYS 109 n 106 LYS 109 H LYS 110 n 107 LYS 110 H PRO 111 n 108 PRO 111 H VAL 112 n 109 VAL 112 H ALA 113 n 110 ALA 113 H PHE 114 n 111 PHE 114 H SER 115 n 112 SER 115 H ASP 116 n 113 ASP 116 H TYR 117 n 114 TYR 117 H ILE 118 n 115 ILE 118 H HIS 119 n 116 HIS 119 H PRO 120 n 117 PRO 120 H VAL 121 n 118 VAL 121 H CYS 122 n 119 CYS 122 H LEU 123 n 120 LEU 123 H PRO 124 n 121 PRO 124 H ASP 125 n 122 ASP 125 H ARG 126 n 123 ARG 126 H GLU 127 n 124 GLU 127 H THR 128 n 125 THR 128 H ALA 129 n 126 ALA 129 H ALA 129 n 127 A ALA 129 H SER 129 n 128 B SER 129 H LEU 129 n 129 C LEU 129 H LEU 130 n 130 LEU 130 H GLN 131 n 131 GLN 131 H ALA 132 n 132 ALA 132 H GLY 133 n 133 GLY 133 H TYR 134 n 134 TYR 134 H LYS 135 n 135 LYS 135 H GLY 136 n 136 GLY 136 H ARG 137 n 137 ARG 137 H VAL 138 n 138 VAL 138 H THR 139 n 139 THR 139 H GLY 140 n 140 GLY 140 H TRP 141 n 141 TRP 141 H GLY 142 n 142 GLY 142 H ASN 143 n 143 ASN 143 H LEU 144 n 144 LEU 144 H LYS 145 n 145 LYS 145 H GLU 146 n 146 GLU 146 H THR 147 n 147 THR 147 H TRP 148 n 148 TRP 148 H THR 149 n 149 THR 149 H ALA 149 n 150 A ALA 149 H ASN 149 n 151 B ASN 149 H VAL 149 n 152 C VAL 149 H GLY 149 n 153 D GLY 149 H LYS 149 n 154 E LYS 149 H GLY 150 n 155 GLY 150 H GLN 151 n 156 GLN 151 H PRO 152 n 157 PRO 152 H SER 153 n 158 SER 153 H VAL 154 n 159 VAL 154 H LEU 155 n 160 LEU 155 H GLN 156 n 161 GLN 156 H VAL 157 n 162 VAL 157 H VAL 158 n 163 VAL 158 H ASN 159 n 164 ASN 159 H LEU 160 n 165 LEU 160 H PRO 161 n 166 PRO 161 H ILE 162 n 167 ILE 162 H VAL 163 n 168 VAL 163 H GLU 164 n 169 GLU 164 H ARG 165 n 170 ARG 165 H PRO 166 n 171 PRO 166 H VAL 167 n 172 VAL 167 H CYS 168 n 173 CYS 168 H LYS 169 n 174 LYS 169 H ASP 170 n 175 ASP 170 H SER 171 n 176 SER 171 H THR 172 n 177 THR 172 H ARG 173 n 178 ARG 173 H ILE 174 n 179 ILE 174 H ARG 175 n 180 ARG 175 H ILE 176 n 181 ILE 176 H THR 177 n 182 THR 177 H ASP 178 n 183 ASP 178 H ASN 179 n 184 ASN 179 H MET 180 n 185 MET 180 H PHE 181 n 186 PHE 181 H CYS 182 n 187 CYS 182 H ALA 183 n 188 ALA 183 H GLY 184 n 189 GLY 184 H TYR 184 n 190 A TYR 184 H LYS 185 n 191 LYS 185 H PRO 186 n 192 PRO 186 H ASP 186 n 193 A ASP 186 H GLU 186 n 194 B GLU 186 H GLY 186 n 195 C GLY 186 H LYS 186 n 196 D LYS 186 H ARG 187 n 197 ARG 187 H GLY 188 n 198 GLY 188 H ASP 189 n 199 ASP 189 H ALA 190 n 200 ALA 190 H CYS 191 n 201 CYS 191 H GLU 192 n 202 GLU 192 H GLY 193 n 203 GLY 193 H ASP 194 n 204 ASP 194 H SER 195 n 205 SER 195 H GLY 196 n 206 GLY 196 H GLY 197 n 207 GLY 197 H PRO 198 n 208 PRO 198 H PHE 199 n 209 PHE 199 H VAL 200 n 210 VAL 200 H MET 201 n 211 MET 201 H LYS 202 n 212 LYS 202 H SER 203 n 213 SER 203 H PRO 204 n 214 PRO 204 H PHE 204 n 215 A PHE 204 H ASN 204 n 216 B ASN 204 H ASN 205 n 217 ASN 205 H ARG 206 n 218 ARG 206 H TRP 207 n 219 TRP 207 H TYR 208 n 220 TYR 208 H GLN 209 n 221 GLN 209 H MET 210 n 222 MET 210 H GLY 211 n 223 GLY 211 H ILE 212 n 224 ILE 212 H VAL 213 n 225 VAL 213 H SER 214 n 226 SER 214 H TRP 215 n 227 TRP 215 H GLY 216 n 228 GLY 216 H GLU 217 n 229 GLU 217 H GLY 219 n 230 GLY 219 H CYS 220 n 231 CYS 220 H ASP 221 n 232 A ASP 221 H ARG 221 n 233 ARG 221 H ASP 222 n 234 ASP 222 H GLY 223 n 235 GLY 223 H LYS 224 n 236 LYS 224 H TYR 225 n 237 TYR 225 H GLY 226 n 238 GLY 226 H PHE 227 n 239 PHE 227 H TYR 228 n 240 TYR 228 H THR 229 n 241 THR 229 H HIS 230 n 242 HIS 230 H VAL 231 n 243 VAL 231 H PHE 232 n 244 PHE 232 H ARG 233 n 245 ARG 233 H LEU 234 n 246 LEU 234 H LYS 235 n 247 LYS 235 H LYS 236 n 248 LYS 236 H TRP 237 n 249 TRP 237 H ILE 238 n 250 ILE 238 H GLN 239 n 251 GLN 239 H LYS 240 n 252 LYS 240 H VAL 241 n 253 VAL 241 H ILE 242 n 254 ILE 242 H ASP 243 n 255 ASP 243 H GLN 244 n 256 GLN 244 H PHE 245 n 257 PHE 245 H GLY 246 n 258 GLY 246 H GLU 247 n 259 GLU 247 H THR 1 n 1 H THR 1 L PHE 1 n 2 G PHE 1 L GLY 1 n 3 F GLY 1 L SER 1 n 4 E SER 1 L GLY 1 n 5 D GLY 1 L GLU 1 n 6 C GLU 1 L ALA 1 n 7 B ALA 1 L ASP 1 n 8 A ASP 1 L CYS 1 n 9 CYS 1 L GLY 2 n 10 GLY 2 L LEU 3 n 11 LEU 3 L ARG 4 n 12 ARG 4 L PRO 5 n 13 PRO 5 L LEU 6 n 14 LEU 6 L PHE 7 n 15 PHE 7 L GLU 8 n 16 GLU 8 L LYS 9 n 17 LYS 9 L LYS 10 n 18 LYS 10 L SER 11 n 19 SER 11 L LEU 12 n 20 LEU 12 L GLU 13 n 21 GLU 13 L ASP 14 n 22 ASP 14 L LYS 14 n 23 A LYS 14 L THR 14 n 24 B THR 14 L GLU 14 n 25 C GLU 14 L ARG 14 n 26 D ARG 14 L GLU 14 n 27 E GLU 14 L LEU 14 n 28 F LEU 14 L LEU 14 n 29 G LEU 14 L GLU 14 n 30 H GLU 14 L SER 14 n 31 I SER 14 L TYR 14 n 32 J TYR 14 L ILE 14 n 33 K ILE 14 L ASP 14 n 34 L ASP 14 L n 35 15 L n 36 16 L DG 1 n 1 DG 1 D DG 2 n 2 DG 2 D DT 3 n 3 DT 3 D DT 4 n 4 DT 4 D DG 5 n 5 DG 5 D DG 6 n 6 DG 6 D DT 7 n 7 DT 7 D DG 8 n 8 DG 8 D DT 9 n 9 DT 9 D DG 10 n 10 DG 10 D DG 11 n 11 DG 11 D DT 12 n 12 DT 12 D DT 13 n 13 DT 13 D DG 14 n 14 DG 14 D DG 15 n 15 DG 15 D author_and_software_defined_assembly PISA 3 trimeric 4120 -15 14920 H ARG 221 A O ARG 233 1_555 H NA 601 F NA NA 1_555 H LYS 224 A O LYS 236 1_555 86.7 H ARG 221 A O ARG 233 1_555 H NA 601 F NA NA 1_555 H HOH 1042 H O HOH 1_555 147.1 H LYS 224 A O LYS 236 1_555 H NA 601 F NA NA 1_555 H HOH 1042 H O HOH 1_555 63.1 H ARG 221 A O ARG 233 1_555 H NA 601 F NA NA 1_555 H HOH 1053 H O HOH 1_555 88.6 H LYS 224 A O LYS 236 1_555 H NA 601 F NA NA 1_555 H HOH 1053 H O HOH 1_555 85.1 H HOH 1042 H O HOH 1_555 H NA 601 F NA NA 1_555 H HOH 1053 H O HOH 1_555 76.8 H ARG 221 A O ARG 233 1_555 H NA 601 F NA NA 1_555 H HOH 1085 H O HOH 1_555 121.2 H LYS 224 A O LYS 236 1_555 H NA 601 F NA NA 1_555 H HOH 1085 H O HOH 1_555 149.4 H HOH 1042 H O HOH 1_555 H NA 601 F NA NA 1_555 H HOH 1085 H O HOH 1_555 86.7 H HOH 1053 H O HOH 1_555 H NA 601 F NA NA 1_555 H HOH 1085 H O HOH 1_555 83.3 H ARG 221 A O ARG 233 1_555 H NA 601 F NA NA 1_555 H HOH 1232 H O HOH 1_555 102.0 H LYS 224 A O LYS 236 1_555 H NA 601 F NA NA 1_555 H HOH 1232 H O HOH 1_555 79.9 H HOH 1042 H O HOH 1_555 H NA 601 F NA NA 1_555 H HOH 1232 H O HOH 1_555 86.0 H HOH 1053 H O HOH 1_555 H NA 601 F NA NA 1_555 H HOH 1232 H O HOH 1_555 161.0 H HOH 1085 H O HOH 1_555 H NA 601 F NA NA 1_555 H HOH 1232 H O HOH 1_555 103.9 D DG 1 C O6 DG 1 1_555 D K 602 G K K 1_555 D DG 2 C O6 DG 2 1_555 70.9 D DG 1 C O6 DG 1 1_555 D K 602 G K K 1_555 D DG 5 C O6 DG 5 1_555 120.0 D DG 2 C O6 DG 2 1_555 D K 602 G K K 1_555 D DG 5 C O6 DG 5 1_555 69.2 D DG 1 C O6 DG 1 1_555 D K 602 G K K 1_555 D DG 6 C O6 DG 6 1_555 69.4 D DG 2 C O6 DG 2 1_555 D K 602 G K K 1_555 D DG 6 C O6 DG 6 1_555 91.0 D DG 5 C O6 DG 5 1_555 D K 602 G K K 1_555 D DG 6 C O6 DG 6 1_555 68.6 D DG 1 C O6 DG 1 1_555 D K 602 G K K 1_555 D DG 10 C O6 DG 10 1_555 112.5 D DG 2 C O6 DG 2 1_555 D K 602 G K K 1_555 D DG 10 C O6 DG 10 1_555 165.7 D DG 5 C O6 DG 5 1_555 D K 602 G K K 1_555 D DG 10 C O6 DG 10 1_555 98.1 D DG 6 C O6 DG 6 1_555 D K 602 G K K 1_555 D DG 10 C O6 DG 10 1_555 77.8 D DG 1 C O6 DG 1 1_555 D K 602 G K K 1_555 D DG 11 C O6 DG 11 1_555 166.6 D DG 2 C O6 DG 2 1_555 D K 602 G K K 1_555 D DG 11 C O6 DG 11 1_555 114.2 D DG 5 C O6 DG 5 1_555 D K 602 G K K 1_555 D DG 11 C O6 DG 11 1_555 73.0 D DG 6 C O6 DG 6 1_555 D K 602 G K K 1_555 D DG 11 C O6 DG 11 1_555 121.6 D DG 10 C O6 DG 10 1_555 D K 602 G K K 1_555 D DG 11 C O6 DG 11 1_555 65.9 D DG 1 C O6 DG 1 1_555 D K 602 G K K 1_555 D DG 14 C O6 DG 14 1_555 103.8 D DG 2 C O6 DG 2 1_555 D K 602 G K K 1_555 D DG 14 C O6 DG 14 1_555 69.6 D DG 5 C O6 DG 5 1_555 D K 602 G K K 1_555 D DG 14 C O6 DG 14 1_555 102.0 D DG 6 C O6 DG 6 1_555 D K 602 G K K 1_555 D DG 14 C O6 DG 14 1_555 160.6 D DG 10 C O6 DG 10 1_555 D K 602 G K K 1_555 D DG 14 C O6 DG 14 1_555 121.1 D DG 11 C O6 DG 11 1_555 D K 602 G K K 1_555 D DG 14 C O6 DG 14 1_555 68.3 D DG 1 C O6 DG 1 1_555 D K 602 G K K 1_555 D DG 15 C O6 DG 15 1_555 70.6 D DG 2 C O6 DG 2 1_555 D K 602 G K K 1_555 D DG 15 C O6 DG 15 1_555 118.2 D DG 5 C O6 DG 5 1_555 D K 602 G K K 1_555 D DG 15 C O6 DG 15 1_555 169.3 D DG 6 C O6 DG 6 1_555 D K 602 G K K 1_555 D DG 15 C O6 DG 15 1_555 117.2 D DG 10 C O6 DG 10 1_555 D K 602 G K K 1_555 D DG 15 C O6 DG 15 1_555 75.4 D DG 11 C O6 DG 11 1_555 D K 602 G K K 1_555 D DG 15 C O6 DG 15 1_555 96.5 D DG 14 C O6 DG 14 1_555 D K 602 G K K 1_555 D DG 15 C O6 DG 15 1_555 75.1 G H ASN 60 GLYCOSYLATION SITE A ASN 53 ASN 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 H N SER 20 A N SER 5 H O VAL 157 A O VAL 162 H O LEU 160 A O LEU 165 H N GLY 136 A N GLY 136 H N ARG 137 A N ARG 137 H O VAL 200 A O VAL 210 H N MET 201 A N MET 211 H O TYR 208 A O TYR 220 H N TRP 215 A N TRP 227 H O PHE 227 A O PHE 239 H O TYR 228 A O TYR 240 H N PHE 181 A N PHE 186 H O LYS 81 A O LYS 77 H N ILE 68 A N ILE 63 H O LEU 65 A O LEU 60 H N PHE 34 A N PHE 19 H N ARG 35 A N ARG 20 H O GLU 39 A O GLU 25 H N SER 45 A N SER 31 H O LEU 53 A O LEU 39 H N VAL 52 A N VAL 38 H O MET 106 A O MET 103 H O LYS 107 A O LYS 104 H N GLU 86 A N GLU 82 A H N TYR 60 A N TYR 47 F H O LYS 60 A O LYS 52 1 D N1 DT 7 C N1 DT 7 1 Y 1 D C2 DT 7 C C2 DT 7 1 Y 1 D O2 DT 7 C O2 DT 7 1 Y 1 D N3 DT 7 C N3 DT 7 1 Y 1 D C4 DT 7 C C4 DT 7 1 Y 1 D O4 DT 7 C O4 DT 7 1 Y 1 D C5 DT 7 C C5 DT 7 1 Y 1 D C7 DT 7 C C7 DT 7 1 Y 1 D C6 DT 7 C C6 DT 7 1 Y 1 L GLY 15 B GLY 35 1 Y 1 L ARG 16 B ARG 36 1 Y 1 H H OG O2 SER 0G6 195 1 2.09 1 H H O O GLU HOH 247 1148 2.16 1 H H O O HOH HOH 1156 1173 2.17 1 H H O O GLU HOH 247 1183 2.19 1 D DG 1 0.060 SIDE CHAIN 1 D DT 12 0.061 SIDE CHAIN 1 D DT 13 0.072 SIDE CHAIN 1 1.82 0.30 108.30 110.12 D D D O4' C1' N9 DG DG DG 1 1 1 N 1 7.49 1.20 115.70 123.19 D D D C5' C4' C3' DG DG DG 5 5 5 N 1 H SER 48 -160.50 -167.88 G 1 H ASN 60 -155.89 84.70 1 H HIS 71 -130.52 -57.06 1 H ILE 79 -122.24 -56.34 1 H ASN 98 -158.49 21.55 1 H SER 115 -160.95 -166.45 B 1 H ASN 204 -145.71 16.39 1 H ASN 205 31.95 42.43 1 L PHE 7 -128.59 -91.72 0.237 0.183 0.204 0.186 2.14 25.1 945 25096 23642 RANDOM 1 0 MOLECULAR REPLACEMENT Engh & Huber 2.14 25.1 251 2967 46 306 2364 2.14 25.1 3QLP 25096 23642 0 0 1 93.0 2.14 2.23 1 93.2 data collection CrystalClear phasing AMoRE refinement CNS 1.1 data reduction HKL-2000 data scaling HKL-2000 Thrombin heavy chain (E.C.3.4.21.5), Thrombin light chain (E.C.3.4.21.5), DNA X-ray structure of the complex between human alpha thrombin and a modified thrombin binding aptamer (mTBA) 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N 7 N N 8 N N 8 N N 8 N N H ALA 55 A ALA 41 HELX_P H CYS 58 A CYS 44 5 1 4 H PRO 60 A PRO 48 HELX_P H ASP 60 A ASP 51 5 2 4 B E H THR 60 A THR 55 HELX_P H ASN 62 A ASN 57 5 3 3 I H ASP 125 A ASP 122 HELX_P H LEU 130 A LEU 130 1 4 9 H GLU 164 A GLU 169 HELX_P H SER 171 A SER 176 1 5 8 H LYS 185 A LYS 191 HELX_P H GLY 186 A GLY 195 5 6 5 C H LEU 234 A LEU 246 HELX_P H ASP 243 A ASP 255 1 7 10 L PHE 7 B PHE 15 HELX_P L SER 11 B SER 19 5 8 5 L THR 14 B THR 24 HELX_P L TYR 14 B TYR 32 1 9 9 B J disulf 2.062 H CYS 42 A SG CYS 28 1_555 H CYS 58 A SG CYS 44 1_555 disulf 2.050 H CYS 122 A SG CYS 119 1_555 L CYS 1 B SG CYS 9 1_555 disulf 2.045 H CYS 168 A SG CYS 173 1_555 H CYS 182 A SG CYS 187 1_555 disulf 2.074 H CYS 191 A SG CYS 201 1_555 H CYS 220 A SG CYS 231 1_555 covale 1.473 one H 0G6 1 D C3 0G6 1_555 H HIS 57 A NE2 HIS 43 1_555 covale 1.436 none H 0G6 1 D C2 0G6 1_555 H SER 195 A OG SER 205 1_555 covale 1.449 one G N-Glycosylation H ASN 60 A ND2 ASN 53 1_555 H NAG 248 E C1 NAG 1_555 covale 1.581 both D DG 1 C P DG 1 1_555 D DG 2 C O3' DG 2 1_555 covale 1.604 both D DG 2 C P DG 2 1_555 D DT 3 C O3' DT 3 1_555 covale 1.610 one D DT 3 C O5' DT 3 1_555 D DT 4 C P DT 4 1_555 metalc 2.301 H ARG 221 A O ARG 233 1_555 H NA 601 F NA NA 1_555 metalc 2.658 H LYS 224 A O LYS 236 1_555 H NA 601 F NA NA 1_555 metalc 2.547 H NA 601 F NA NA 1_555 H HOH 1042 H O HOH 1_555 metalc 3.055 H NA 601 F NA NA 1_555 H HOH 1053 H O HOH 1_555 metalc 2.248 H NA 601 F NA NA 1_555 H HOH 1085 H O HOH 1_555 metalc 2.328 H NA 601 F NA NA 1_555 H HOH 1232 H O HOH 1_555 metalc 2.883 D DG 1 C O6 DG 1 1_555 D K 602 G K K 1_555 metalc 2.723 D DG 2 C O6 DG 2 1_555 D K 602 G K K 1_555 metalc 2.877 D DG 5 C O6 DG 5 1_555 D K 602 G K K 1_555 metalc 2.868 D DG 6 C O6 DG 6 1_555 D K 602 G K K 1_555 metalc 2.694 D DG 10 C O6 DG 10 1_555 D K 602 G K K 1_555 metalc 2.906 D DG 11 C O6 DG 11 1_555 D K 602 G K K 1_555 metalc 2.839 D DG 14 C O6 DG 14 1_555 D K 602 G K K 1_555 metalc 2.813 D DG 15 C O6 DG 15 1_555 D K 602 G K K 1_555 hydrog TYPE_6_PAIR D DG 1 C N1 DG 1 1_555 D DG 6 C O6 DG 6 1_555 hydrog TYPE_6_PAIR D DG 1 C N2 DG 1 1_555 D DG 6 C N7 DG 6 1_555 hydrog TYPE_6_PAIR D DG 1 C N7 DG 1 1_555 D DG 15 C N2 DG 15 1_555 hydrog TYPE_6_PAIR D DG 1 C O6 DG 1 1_555 D DG 15 C N1 DG 15 1_555 hydrog TYPE_6_PAIR D DG 2 C N7 DG 2 1_555 D DG 5 C N2 DG 5 1_555 hydrog TYPE_6_PAIR D DG 2 C O6 DG 2 1_555 D DG 5 C N1 DG 5 1_555 hydrog TYPE_6_PAIR D DG 2 C N1 DG 2 1_555 D DG 14 C O6 DG 14 1_555 hydrog TYPE_6_PAIR D DG 2 C N2 DG 2 1_555 D DG 14 C N7 DG 14 1_555 hydrog DT-DG MISPAIR D DT 4 C O2 DT 4 1_555 D DG 5 C N1 DG 5 1_555 hydrog TYPE_6_PAIR D DG 5 C N7 DG 5 1_555 D DG 11 C N2 DG 11 1_555 hydrog TYPE_6_PAIR D DG 5 C O6 DG 5 1_555 D DG 11 C N1 DG 11 1_555 hydrog TYPE_6_PAIR D DG 6 C N1 DG 6 1_555 D DG 10 C O6 DG 10 1_555 hydrog TYPE_6_PAIR D DG 6 C N2 DG 6 1_555 D DG 10 C N7 DG 10 1_555 hydrog DG-DG MISPAIR D DG 8 C N2 DG 8 1_555 D DG 10 C O6 DG 10 1_555 hydrog TYPE_6_PAIR D DG 10 C N1 DG 10 1_555 D DG 15 C O6 DG 15 1_555 hydrog TYPE_6_PAIR D DG 10 C N2 DG 10 1_555 D DG 15 C N7 DG 15 1_555 hydrog TYPE_6_PAIR D DG 11 C N7 DG 11 1_555 D DG 14 C N2 DG 14 1_555 hydrog TYPE_6_PAIR D DG 11 C O6 DG 11 1_555 D DG 14 C N1 DG 14 1_555 HYDROLASE/HYDROLASE INHIBITOR/DNA PROTEIN-DNA COMPLEX, SERINE PROTEASE, BLOOD COAGULATION, aptamer, serine protease fold, HYDROLASE-HYDROLASE INHIBITOR-DNA complex H SER 36 A SER 22 A 1 H PRO 37 A PRO 23 -0.59 THRB_HUMAN UNP 1 364 P00734 IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE THRB_HUMAN UNP 2 328 P00734 TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR 3QLP PDB 3 3QLP 364 622 3QLP 16 247 P00734 H 1 1 259 328 363 3QLP 1 16 P00734 H L 2 1 36 1 15 3QLP 1 15 3QLP D 3 1 15 7 7 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel H SER 20 A SER 5 H ASP 21 A ASP 6 H GLN 156 A GLN 161 H PRO 161 A PRO 166 H LYS 135 A LYS 135 H GLY 140 A GLY 140 H PRO 198 A PRO 208 H LYS 202 A LYS 212 H TRP 207 A TRP 219 H TRP 215 A TRP 227 H GLY 226 A GLY 238 H HIS 230 A HIS 242 H MET 180 A MET 185 H ALA 183 A ALA 188 H LYS 81 A LYS 77 H SER 83 A SER 79 H LEU 64 A LEU 59 H ILE 68 A ILE 63 H GLN 30 A GLN 15 H ARG 35 A ARG 20 H GLU 39 A GLU 25 H LEU 46 A LEU 32 H TRP 51 A TRP 37 H THR 54 A THR 40 H ALA 104 A ALA 101 H LEU 108 A LEU 105 H LEU 85 A LEU 81 H ILE 90 A ILE 86 H LEU 60 A LEU 46 H TYR 60 A TYR 47 A H LYS 60 A LYS 52 H ASN 60 A ASN 53 F G 23 I 2 2 2