0.029405
0.000000
0.007304
0.000000
0.019270
0.000000
0.000000
0.000000
0.026664
0.00000
0.00000
0.00000
de Serrano, V.S.
Rodriguez, M.M.
Schreiter, E.R.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.00
103.95
90.00
34.008
51.894
38.644
C2 H4 O
44.053
ACETYL GROUP
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
N3 -1
42.020
AZIDE ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C34 H32 Fe N4 O4
616.487
PROTOPORPHYRIN IX CONTAINING FE
HEME
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
N
2
N
O
N
3
N
C
N
4
N
H
N
5
N
H
N
6
N
H
N
7
N
H
N
8
N
N
N
9
S
C
N
10
N
C
N
11
N
O
N
12
N
C
N
13
N
O
N
14
N
H
N
15
N
H
N
16
N
H
N
17
N
H
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
N
N
22
S
C
N
23
N
C
N
24
N
O
N
25
N
C
N
26
N
C
N
27
N
C
N
28
N
N
N
29
N
C
N
30
N
N
N
31
N
N
N
32
N
O
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
N
N
49
S
C
N
50
N
C
N
51
N
O
N
52
N
C
N
53
N
C
N
54
N
O
N
55
N
N
N
56
N
O
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
N
N
66
S
C
N
67
N
C
N
68
N
O
N
69
N
C
N
70
N
C
N
71
N
O
N
72
N
O
N
73
N
O
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
N
N
82
N
N
N
83
N
N
N
84
N
N
N
85
R
C
N
86
N
C
N
87
N
O
N
88
N
C
N
89
N
S
N
90
N
O
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
C
N
99
N
O
N
100
N
C
N
101
N
O
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
N
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
N
N
129
S
C
N
130
N
C
N
131
N
O
N
132
N
C
N
133
N
C
N
134
N
C
N
135
N
O
N
136
N
O
N
137
N
O
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
N
N
148
N
C
N
149
N
C
N
150
N
O
N
151
N
O
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
C
N
158
N
C
N
159
N
C
N
160
N
C
Y
161
N
C
Y
162
N
C
Y
163
N
C
Y
164
N
C
N
165
N
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
O
N
171
N
C
N
172
N
C
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
C
Y
178
N
C
Y
179
N
C
Y
180
N
C
Y
181
N
C
N
182
N
C
N
183
N
C
N
184
N
C
N
185
N
C
N
186
N
C
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
C
N
193
N
O
N
194
N
O
Y
195
N
N
N
196
N
N
Y
197
N
N
N
198
N
N
N
199
N
FE
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
N
N
233
S
C
N
234
N
C
N
235
N
O
N
236
N
C
Y
237
N
C
Y
238
N
N
Y
239
N
C
Y
240
N
C
Y
241
N
N
N
242
N
O
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
O
N
254
N
H
N
255
N
H
N
256
N
N
N
257
S
C
N
258
N
C
N
259
N
O
N
260
S
C
N
261
N
C
N
262
N
C
N
263
N
C
N
264
N
O
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
N
N
279
S
C
N
280
N
C
N
281
N
O
N
282
N
C
N
283
N
C
N
284
N
C
N
285
N
C
N
286
N
O
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
N
N
301
S
C
N
302
N
C
N
303
N
O
N
304
N
C
N
305
N
C
N
306
N
C
N
307
N
C
N
308
N
N
N
309
N
O
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
N
N
326
S
C
N
327
N
C
N
328
N
O
N
329
N
C
N
330
N
C
N
331
N
S
N
332
N
C
N
333
N
O
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
N
C
Y
350
N
C
Y
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
N
356
N
O
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
N
N
369
S
C
N
370
N
C
N
371
N
O
N
372
N
C
N
373
N
C
N
374
N
C
N
375
N
O
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
N
N
386
S
C
N
387
N
C
N
388
N
O
N
389
N
C
N
390
N
O
N
391
N
O
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
N
N
400
S
C
N
401
N
C
N
402
N
O
N
403
R
C
N
404
N
O
N
405
N
C
N
406
N
O
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
N
N
417
S
C
N
418
N
C
N
419
N
O
N
420
N
C
Y
421
N
C
Y
422
N
C
Y
423
N
C
Y
424
N
N
Y
425
N
C
Y
426
N
C
Y
427
N
C
Y
428
N
C
Y
429
N
C
N
430
N
O
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
N
N
444
S
C
N
445
N
C
N
446
N
O
N
447
N
C
Y
448
N
C
Y
449
N
C
Y
450
N
C
Y
451
N
C
Y
452
N
C
Y
453
N
C
N
454
N
O
N
455
N
O
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
N
N
468
S
C
N
469
N
C
N
470
N
O
N
471
N
C
N
472
N
C
N
473
N
C
N
474
N
O
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
doub
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
doub
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
doub
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
doub
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
doub
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
doub
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
doub
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
doub
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
doub
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
doub
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
doub
N
148
N
sing
N
149
N
sing
N
150
N
doub
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
doub
N
156
N
sing
N
157
N
sing
Y
158
N
doub
Y
159
N
sing
Y
160
N
sing
N
161
N
sing
Y
162
N
doub
N
163
N
sing
Y
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
doub
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
doub
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
doub
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
Y
190
N
sing
Y
191
N
sing
Y
192
N
doub
N
193
N
sing
Y
194
N
sing
N
195
N
sing
Y
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
doub
N
206
N
doub
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
doub
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
Y
239
N
sing
Y
240
N
doub
Y
241
N
doub
N
242
N
sing
Y
243
N
sing
N
244
N
sing
Y
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
doub
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
doub
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
doub
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
doub
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
Y
347
N
doub
Y
348
N
sing
Y
349
N
sing
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
doub
N
354
N
sing
Y
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
doub
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
doub
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
doub
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
doub
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
Y
416
N
doub
Y
417
N
sing
Y
418
N
sing
N
419
N
sing
Y
420
N
doub
Y
421
N
sing
Y
422
N
sing
N
423
N
sing
Y
424
N
sing
Y
425
N
doub
N
426
N
sing
Y
427
N
doub
N
428
N
sing
Y
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
doub
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
Y
444
N
doub
Y
445
N
sing
Y
446
N
sing
N
447
N
sing
Y
448
N
doub
N
449
N
sing
Y
450
N
doub
N
451
N
sing
Y
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
doub
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
To be Published
0353
High Resolution Structures of Blackfin Tuna Myoglobin
10.2210/pdb3qm9/pdb
pdb_00003qm9
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2006-06-06
MAR CCD 165 mm
SINGLE WAVELENGTH
M
x-ray
1
0.92
1.0
31-ID
APS
0.92
SYNCHROTRON
APS BEAMLINE 31-ID
15479.013
Myoglobin
1
nat
polymer
616.487
PROTOPORPHYRIN IX CONTAINING FE
1
syn
non-polymer
42.020
AZIDE ION
1
syn
non-polymer
62.068
1,2-ETHANEDIOL
6
syn
non-polymer
18.015
water
168
nat
water
no
yes
(ACE)ADFDAVLKCWGPVEADYTTIGGLVLTRLFKEHPETQKLFPKFAGIAQADIAGNAAVSAHGATVLKKLGELLKAKG
SHAAILKPLANSHATKHKIPINNFKLISEVLVKVMQEKAGLDAGGQTALRNVMGIIIADLEANYKELGFS
XADFDAVLKCWGPVEADYTTIGGLVLTRLFKEHPETQKLFPKFAGIAQADIAGNAAVSAHGATVLKKLGELLKAKGSHAA
ILKPLANSHATKHKIPINNFKLISEVLVKVMQEKAGLDAGGQTALRNVMGIIIADLEANYKELGFS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
blackfin tuna
sample
48168
Thunnus atlanticus
1
2.14
42.47
VAPOR DIFFUSION, HANGING DROP
5.6
0.2 M potassium/sodium tartrate, 0.1 M sodium citrate, 2.0 M ammonium sulfate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_conn
struct_conn_type
struct_site
repository
Initial release
Data collection
Database references
Derived calculations
Refinement description
1
0
2012-02-08
1
1
2023-09-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.conn_type_id
_struct_conn.id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn_type.id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
BLACKFIN TUNA METAQUO-MYOGLOBIN
S-NITROSYLATED BLACKFIN TUNA MYOGLOBIN
FERROUS NITROSYL BLACKFIN TUNA MYOGLOBIN
RCSB
Y
RCSB
2011-02-03
REL
REL
HEM
PROTOPORPHYRIN IX CONTAINING FE
AZI
AZIDE ION
EDO
1,2-ETHANEDIOL
HOH
water
THE AMINO ACID SEQUENCE OF BLACKFIN TUNA MYOGLOBIN IS NOT AVAILABLE IN UNIPROT SEQUENCE DATABASE. HOWEVER, IT IS ALMOST IDENTICAL TO BLUEFIN (P68189) AND BIGEYE TUNA (Q76G09) MYOGLOBINS, EXCEPT AN H->Q SUBSTITUTION AT RESIDUE 112. THIS SUBSTITUTION ALSO PRESENTS IN OTHER TUNA SPECIES.
2NRL
PDB entry 2NRL
PDB
experimental model
HEM
148
2
HEM
HEM
201
A
AZI
1
3
AZI
AZI
202
A
EDO
2
4
EDO
EDO
203
A
EDO
3
4
EDO
EDO
204
A
EDO
4
4
EDO
EDO
205
A
EDO
5
4
EDO
EDO
206
A
EDO
6
4
EDO
EDO
207
A
EDO
7
4
EDO
EDO
208
A
HOH
155
5
HOH
HOH
301
A
HOH
156
5
HOH
HOH
302
A
HOH
157
5
HOH
HOH
303
A
HOH
158
5
HOH
HOH
304
A
HOH
162
5
HOH
HOH
305
A
HOH
164
5
HOH
HOH
306
A
HOH
165
5
HOH
HOH
307
A
HOH
166
5
HOH
HOH
308
A
HOH
167
5
HOH
HOH
309
A
HOH
168
5
HOH
HOH
310
A
HOH
169
5
HOH
HOH
311
A
HOH
170
5
HOH
HOH
312
A
HOH
171
5
HOH
HOH
313
A
HOH
173
5
HOH
HOH
314
A
HOH
174
5
HOH
HOH
315
A
HOH
175
5
HOH
HOH
316
A
HOH
176
5
HOH
HOH
317
A
HOH
177
5
HOH
HOH
318
A
HOH
181
5
HOH
HOH
319
A
HOH
182
5
HOH
HOH
320
A
HOH
183
5
HOH
HOH
321
A
HOH
184
5
HOH
HOH
322
A
HOH
185
5
HOH
HOH
323
A
HOH
188
5
HOH
HOH
324
A
HOH
189
5
HOH
HOH
325
A
HOH
190
5
HOH
HOH
326
A
HOH
191
5
HOH
HOH
327
A
HOH
192
5
HOH
HOH
328
A
HOH
193
5
HOH
HOH
329
A
HOH
194
5
HOH
HOH
330
A
HOH
196
5
HOH
HOH
331
A
HOH
198
5
HOH
HOH
332
A
HOH
200
5
HOH
HOH
333
A
HOH
201
5
HOH
HOH
334
A
HOH
205
5
HOH
HOH
335
A
HOH
206
5
HOH
HOH
336
A
HOH
207
5
HOH
HOH
337
A
HOH
208
5
HOH
HOH
338
A
HOH
209
5
HOH
HOH
339
A
HOH
210
5
HOH
HOH
340
A
HOH
211
5
HOH
HOH
341
A
HOH
212
5
HOH
HOH
342
A
HOH
213
5
HOH
HOH
343
A
HOH
214
5
HOH
HOH
344
A
HOH
215
5
HOH
HOH
345
A
HOH
2
5
HOH
HOH
346
A
HOH
3
5
HOH
HOH
347
A
HOH
5
5
HOH
HOH
348
A
HOH
6
5
HOH
HOH
349
A
HOH
220
5
HOH
HOH
350
A
HOH
221
5
HOH
HOH
351
A
HOH
222
5
HOH
HOH
352
A
HOH
223
5
HOH
HOH
353
A
HOH
224
5
HOH
HOH
354
A
HOH
225
5
HOH
HOH
355
A
HOH
226
5
HOH
HOH
356
A
HOH
227
5
HOH
HOH
357
A
HOH
228
5
HOH
HOH
358
A
HOH
229
5
HOH
HOH
359
A
HOH
230
5
HOH
HOH
360
A
HOH
231
5
HOH
HOH
361
A
HOH
232
5
HOH
HOH
362
A
HOH
233
5
HOH
HOH
363
A
HOH
234
5
HOH
HOH
364
A
HOH
235
5
HOH
HOH
365
A
HOH
236
5
HOH
HOH
366
A
HOH
237
5
HOH
HOH
367
A
HOH
238
5
HOH
HOH
368
A
HOH
239
5
HOH
HOH
369
A
HOH
240
5
HOH
HOH
370
A
HOH
241
5
HOH
HOH
371
A
HOH
242
5
HOH
HOH
372
A
HOH
243
5
HOH
HOH
373
A
HOH
244
5
HOH
HOH
374
A
HOH
245
5
HOH
HOH
375
A
HOH
7
5
HOH
HOH
376
A
HOH
8
5
HOH
HOH
377
A
HOH
9
5
HOH
HOH
378
A
HOH
10
5
HOH
HOH
379
A
HOH
11
5
HOH
HOH
380
A
HOH
12
5
HOH
HOH
381
A
HOH
13
5
HOH
HOH
382
A
HOH
14
5
HOH
HOH
383
A
HOH
16
5
HOH
HOH
384
A
HOH
17
5
HOH
HOH
385
A
HOH
18
5
HOH
HOH
386
A
HOH
19
5
HOH
HOH
387
A
HOH
20
5
HOH
HOH
388
A
HOH
21
5
HOH
HOH
389
A
HOH
22
5
HOH
HOH
390
A
HOH
23
5
HOH
HOH
391
A
HOH
24
5
HOH
HOH
392
A
HOH
25
5
HOH
HOH
393
A
HOH
26
5
HOH
HOH
394
A
HOH
27
5
HOH
HOH
395
A
HOH
31
5
HOH
HOH
396
A
HOH
32
5
HOH
HOH
397
A
HOH
34
5
HOH
HOH
398
A
HOH
35
5
HOH
HOH
399
A
HOH
36
5
HOH
HOH
400
A
HOH
37
5
HOH
HOH
401
A
HOH
38
5
HOH
HOH
402
A
HOH
39
5
HOH
HOH
403
A
HOH
40
5
HOH
HOH
404
A
HOH
41
5
HOH
HOH
405
A
HOH
43
5
HOH
HOH
406
A
HOH
45
5
HOH
HOH
407
A
HOH
46
5
HOH
HOH
408
A
HOH
47
5
HOH
HOH
409
A
HOH
49
5
HOH
HOH
410
A
HOH
50
5
HOH
HOH
411
A
HOH
52
5
HOH
HOH
412
A
HOH
54
5
HOH
HOH
413
A
HOH
55
5
HOH
HOH
414
A
HOH
56
5
HOH
HOH
415
A
HOH
57
5
HOH
HOH
416
A
HOH
60
5
HOH
HOH
417
A
HOH
61
5
HOH
HOH
418
A
HOH
64
5
HOH
HOH
419
A
HOH
65
5
HOH
HOH
420
A
HOH
67
5
HOH
HOH
421
A
HOH
69
5
HOH
HOH
422
A
HOH
70
5
HOH
HOH
423
A
HOH
71
5
HOH
HOH
424
A
HOH
72
5
HOH
HOH
425
A
HOH
74
5
HOH
HOH
426
A
HOH
77
5
HOH
HOH
427
A
HOH
89
5
HOH
HOH
428
A
HOH
90
5
HOH
HOH
429
A
HOH
93
5
HOH
HOH
430
A
HOH
97
5
HOH
HOH
431
A
HOH
98
5
HOH
HOH
432
A
HOH
105
5
HOH
HOH
433
A
HOH
111
5
HOH
HOH
434
A
HOH
113
5
HOH
HOH
435
A
HOH
114
5
HOH
HOH
436
A
HOH
119
5
HOH
HOH
437
A
HOH
123
5
HOH
HOH
438
A
HOH
124
5
HOH
HOH
439
A
HOH
125
5
HOH
HOH
440
A
HOH
126
5
HOH
HOH
441
A
HOH
127
5
HOH
HOH
442
A
HOH
128
5
HOH
HOH
443
A
HOH
129
5
HOH
HOH
444
A
HOH
130
5
HOH
HOH
445
A
HOH
131
5
HOH
HOH
446
A
HOH
132
5
HOH
HOH
447
A
HOH
133
5
HOH
HOH
448
A
HOH
134
5
HOH
HOH
449
A
HOH
135
5
HOH
HOH
450
A
HOH
136
5
HOH
HOH
451
A
HOH
137
5
HOH
HOH
452
A
HOH
138
5
HOH
HOH
453
A
HOH
140
5
HOH
HOH
454
A
HOH
141
5
HOH
HOH
455
A
HOH
142
5
HOH
HOH
456
A
HOH
143
5
HOH
HOH
457
A
HOH
144
5
HOH
HOH
458
A
HOH
145
5
HOH
HOH
459
A
HOH
146
5
HOH
HOH
460
A
HOH
147
5
HOH
HOH
461
A
HOH
148
5
HOH
HOH
462
A
HOH
149
5
HOH
HOH
463
A
HOH
150
5
HOH
HOH
464
A
HOH
151
5
HOH
HOH
465
A
HOH
152
5
HOH
HOH
466
A
HOH
153
5
HOH
HOH
467
A
HOH
154
5
HOH
HOH
468
A
ACE
1
n
1
ACE
1
A
ALA
2
n
2
ALA
2
A
ASP
3
n
3
ASP
3
A
PHE
4
n
4
PHE
4
A
ASP
5
n
5
ASP
5
A
ALA
6
n
6
ALA
6
A
VAL
7
n
7
VAL
7
A
LEU
8
n
8
LEU
8
A
LYS
9
n
9
LYS
9
A
CYS
10
n
10
CYS
10
A
TRP
11
n
11
TRP
11
A
GLY
12
n
12
GLY
12
A
PRO
13
n
13
PRO
13
A
VAL
14
n
14
VAL
14
A
GLU
15
n
15
GLU
15
A
ALA
16
n
16
ALA
16
A
ASP
17
n
17
ASP
17
A
TYR
18
n
18
TYR
18
A
THR
19
n
19
THR
19
A
THR
20
n
20
THR
20
A
ILE
21
n
21
ILE
21
A
GLY
22
n
22
GLY
22
A
GLY
23
n
23
GLY
23
A
LEU
24
n
24
LEU
24
A
VAL
25
n
25
VAL
25
A
LEU
26
n
26
LEU
26
A
THR
27
n
27
THR
27
A
ARG
28
n
28
ARG
28
A
LEU
29
n
29
LEU
29
A
PHE
30
n
30
PHE
30
A
LYS
31
n
31
LYS
31
A
GLU
32
n
32
GLU
32
A
HIS
33
n
33
HIS
33
A
PRO
34
n
34
PRO
34
A
GLU
35
n
35
GLU
35
A
THR
36
n
36
THR
36
A
GLN
37
n
37
GLN
37
A
LYS
38
n
38
LYS
38
A
LEU
39
n
39
LEU
39
A
PHE
40
n
40
PHE
40
A
PRO
41
n
41
PRO
41
A
LYS
42
n
42
LYS
42
A
PHE
43
n
43
PHE
43
A
ALA
44
n
44
ALA
44
A
GLY
45
n
45
GLY
45
A
ILE
46
n
46
ILE
46
A
ALA
47
n
47
ALA
47
A
GLN
48
n
48
GLN
48
A
ALA
49
n
49
ALA
49
A
ASP
50
n
50
ASP
50
A
ILE
51
n
51
ILE
51
A
ALA
52
n
52
ALA
52
A
GLY
53
n
53
GLY
53
A
ASN
54
n
54
ASN
54
A
ALA
55
n
55
ALA
55
A
ALA
56
n
56
ALA
56
A
VAL
57
n
57
VAL
57
A
SER
58
n
58
SER
58
A
ALA
59
n
59
ALA
59
A
HIS
60
n
60
HIS
60
A
GLY
61
n
61
GLY
61
A
ALA
62
n
62
ALA
62
A
THR
63
n
63
THR
63
A
VAL
64
n
64
VAL
64
A
LEU
65
n
65
LEU
65
A
LYS
66
n
66
LYS
66
A
LYS
67
n
67
LYS
67
A
LEU
68
n
68
LEU
68
A
GLY
69
n
69
GLY
69
A
GLU
70
n
70
GLU
70
A
LEU
71
n
71
LEU
71
A
LEU
72
n
72
LEU
72
A
LYS
73
n
73
LYS
73
A
ALA
74
n
74
ALA
74
A
LYS
75
n
75
LYS
75
A
GLY
76
n
76
GLY
76
A
SER
77
n
77
SER
77
A
HIS
78
n
78
HIS
78
A
ALA
79
n
79
ALA
79
A
ALA
80
n
80
ALA
80
A
ILE
81
n
81
ILE
81
A
LEU
82
n
82
LEU
82
A
LYS
83
n
83
LYS
83
A
PRO
84
n
84
PRO
84
A
LEU
85
n
85
LEU
85
A
ALA
86
n
86
ALA
86
A
ASN
87
n
87
ASN
87
A
SER
88
n
88
SER
88
A
HIS
89
n
89
HIS
89
A
ALA
90
n
90
ALA
90
A
THR
91
n
91
THR
91
A
LYS
92
n
92
LYS
92
A
HIS
93
n
93
HIS
93
A
LYS
94
n
94
LYS
94
A
ILE
95
n
95
ILE
95
A
PRO
96
n
96
PRO
96
A
ILE
97
n
97
ILE
97
A
ASN
98
n
98
ASN
98
A
ASN
99
n
99
ASN
99
A
PHE
100
n
100
PHE
100
A
LYS
101
n
101
LYS
101
A
LEU
102
n
102
LEU
102
A
ILE
103
n
103
ILE
103
A
SER
104
n
104
SER
104
A
GLU
105
n
105
GLU
105
A
VAL
106
n
106
VAL
106
A
LEU
107
n
107
LEU
107
A
VAL
108
n
108
VAL
108
A
LYS
109
n
109
LYS
109
A
VAL
110
n
110
VAL
110
A
MET
111
n
111
MET
111
A
GLN
112
n
112
GLN
112
A
GLU
113
n
113
GLU
113
A
LYS
114
n
114
LYS
114
A
ALA
115
n
115
ALA
115
A
GLY
116
n
116
GLY
116
A
LEU
117
n
117
LEU
117
A
ASP
118
n
118
ASP
118
A
ALA
119
n
119
ALA
119
A
GLY
120
n
120
GLY
120
A
GLY
121
n
121
GLY
121
A
GLN
122
n
122
GLN
122
A
THR
123
n
123
THR
123
A
ALA
124
n
124
ALA
124
A
LEU
125
n
125
LEU
125
A
ARG
126
n
126
ARG
126
A
ASN
127
n
127
ASN
127
A
VAL
128
n
128
VAL
128
A
MET
129
n
129
MET
129
A
GLY
130
n
130
GLY
130
A
ILE
131
n
131
ILE
131
A
ILE
132
n
132
ILE
132
A
ILE
133
n
133
ILE
133
A
ALA
134
n
134
ALA
134
A
ASP
135
n
135
ASP
135
A
LEU
136
n
136
LEU
136
A
GLU
137
n
137
GLU
137
A
ALA
138
n
138
ALA
138
A
ASN
139
n
139
ASN
139
A
TYR
140
n
140
TYR
140
A
LYS
141
n
141
LYS
141
A
GLU
142
n
142
GLU
142
A
LEU
143
n
143
LEU
143
A
GLY
144
n
144
GLY
144
A
PHE
145
n
145
PHE
145
A
SER
146
n
146
SER
146
A
author_and_software_defined_assembly
PISA
1
monomeric
A
HIS
89
A
NE2
HIS
89
1_555
A
HEM
201
A
B
FE
HEM
1_555
A
HEM
201
A
B
NA
HEM
1_555
90.3
A
HIS
89
A
NE2
HIS
89
1_555
A
HEM
201
A
B
FE
HEM
1_555
A
HEM
201
A
B
NB
HEM
1_555
91.7
A
HEM
201
A
B
NA
HEM
1_555
A
HEM
201
A
B
FE
HEM
1_555
A
HEM
201
A
B
NB
HEM
1_555
88.8
A
HIS
89
A
NE2
HIS
89
1_555
A
HEM
201
A
B
FE
HEM
1_555
A
HEM
201
A
B
NC
HEM
1_555
95.3
A
HEM
201
A
B
NA
HEM
1_555
A
HEM
201
A
B
FE
HEM
1_555
A
HEM
201
A
B
NC
HEM
1_555
174.4
A
HEM
201
A
B
NB
HEM
1_555
A
HEM
201
A
B
FE
HEM
1_555
A
HEM
201
A
B
NC
HEM
1_555
90.7
A
HIS
89
A
NE2
HIS
89
1_555
A
HEM
201
A
B
FE
HEM
1_555
A
HEM
201
A
B
ND
HEM
1_555
94.4
A
HEM
201
A
B
NA
HEM
1_555
A
HEM
201
A
B
FE
HEM
1_555
A
HEM
201
A
B
ND
HEM
1_555
91.4
A
HEM
201
A
B
NB
HEM
1_555
A
HEM
201
A
B
FE
HEM
1_555
A
HEM
201
A
B
ND
HEM
1_555
173.9
A
HEM
201
A
B
NC
HEM
1_555
A
HEM
201
A
B
FE
HEM
1_555
A
HEM
201
A
B
ND
HEM
1_555
88.5
A
HIS
89
A
NE2
HIS
89
1_555
A
HEM
201
A
B
FE
HEM
1_555
A
AZI
202
A
C
N1
AZI
1_555
176.5
A
HEM
201
A
B
NA
HEM
1_555
A
HEM
201
A
B
FE
HEM
1_555
A
AZI
202
A
C
N1
AZI
1_555
91.7
A
HEM
201
A
B
NB
HEM
1_555
A
HEM
201
A
B
FE
HEM
1_555
A
AZI
202
A
C
N1
AZI
1_555
91.2
A
HEM
201
A
B
NC
HEM
1_555
A
HEM
201
A
B
FE
HEM
1_555
A
AZI
202
A
C
N1
AZI
1_555
82.7
A
HEM
201
A
B
ND
HEM
1_555
A
HEM
201
A
B
FE
HEM
1_555
A
AZI
202
A
C
N1
AZI
1_555
82.7
A
HIS
89
A
NE2
HIS
89
1_555
A
HEM
201
B
B
FE
HEM
1_555
A
HEM
201
A
B
NA
HEM
1_555
81.5
A
HIS
89
A
NE2
HIS
89
1_555
A
HEM
201
B
B
FE
HEM
1_555
A
HEM
201
A
B
NB
HEM
1_555
84.5
A
HEM
201
A
B
NA
HEM
1_555
A
HEM
201
B
B
FE
HEM
1_555
A
HEM
201
A
B
NB
HEM
1_555
90.9
A
HIS
89
A
NE2
HIS
89
1_555
A
HEM
201
B
B
FE
HEM
1_555
A
HEM
201
A
B
NC
HEM
1_555
85.6
A
HEM
201
A
B
NA
HEM
1_555
A
HEM
201
B
B
FE
HEM
1_555
A
HEM
201
A
B
NC
HEM
1_555
166.4
A
HEM
201
A
B
NB
HEM
1_555
A
HEM
201
B
B
FE
HEM
1_555
A
HEM
201
A
B
NC
HEM
1_555
92.3
A
HIS
89
A
NE2
HIS
89
1_555
A
HEM
201
B
B
FE
HEM
1_555
A
HEM
201
A
B
ND
HEM
1_555
82.9
A
HEM
201
A
B
NA
HEM
1_555
A
HEM
201
B
B
FE
HEM
1_555
A
HEM
201
A
B
ND
HEM
1_555
88.5
A
HEM
201
A
B
NB
HEM
1_555
A
HEM
201
B
B
FE
HEM
1_555
A
HEM
201
A
B
ND
HEM
1_555
167.3
A
HEM
201
A
B
NC
HEM
1_555
A
HEM
201
B
B
FE
HEM
1_555
A
HEM
201
A
B
ND
HEM
1_555
85.5
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
C
GLY
76
B
A
C
GLY
76
0
Y
1
A
A
OE2
O
GLU
HOH
70
340
1.98
A
1
A
A
OD2
O
ASP
HOH
17
428
2.01
A
1
A
A
O1D
O
HEM
HOH
201
437
2.16
B
1
A
A
CD
O
GLU
HOH
70
340
2.19
A
1
6.30
0.90
118.30
124.60
A
A
A
CB
CG
OD1
ASP
ASP
ASP
17
17
17
A
A
A
N
1
-4.01
0.50
120.30
116.29
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
28
28
28
B
B
B
N
1
7.53
1.20
123.30
130.83
A
A
A
OE1
CD
OE2
GLU
GLU
GLU
32
32
32
B
B
B
N
1
-5.58
0.90
118.30
112.72
A
A
A
CB
CG
OD2
ASP
ASP
ASP
50
50
50
A
A
A
N
1
-20.04
2.30
115.30
95.26
A
A
A
CA
CB
CG
LEU
LEU
LEU
82
82
82
B
B
B
N
1
15.80
1.70
111.00
126.80
A
A
A
CB
CG
CD1
LEU
LEU
LEU
82
82
82
B
B
B
N
1
-14.22
1.20
123.30
109.08
A
A
A
OE1
CD
OE2
GLU
GLU
GLU
105
105
105
A
A
A
N
1
-3.30
0.50
120.30
117.00
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
126
126
126
A
A
A
N
1
A
A
CE
NZ
LYS
LYS
38
38
0.206
0.025
1.486
1.692
C
C
N
1
A
A
C
O
GLY
GLY
76
76
-0.114
0.016
1.232
1.118
B
B
N
1
A
A
CB
CG2
ILE
ILE
81
81
-0.202
0.031
1.524
1.322
A
A
N
1
A
A
N
CA
LEU
LEU
82
82
0.122
0.020
1.459
1.581
A
N
1
A
A
CD
OE1
GLU
GLU
105
105
-0.117
0.011
1.252
1.135
A
A
N
1
A
A
CD
OE2
GLU
GLU
105
105
-0.118
0.011
1.252
1.134
A
A
N
1
A
ASP
17
-155.33
72.79
1
A
ASP
17
-147.13
57.12
1
A
PHE
145
A
-119.15
74.25
7.658
4.67
0.00
4.66
-1.96
0.00
-2.70
0.980
0.974
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.13324
0.12002
0.12068
0.91
17.27
4356
88244
82720
5.0
93.74
0.318
0.008
RANDOM
1
Anisotropic
THROUGHOUT
RIGID BODY refinement
0.004
0.004
0.80
0.80
1.40
PDB entry 2NRL
MAXIMUM LIKELIHOOD
MASK
0.91
17.27
168
1329
70
0
1091
0.030
0.022
1544
0.007
0.020
1090
2.430
2.170
2134
1.152
3.000
2714
4.996
5.000
212
32.146
25.690
58
13.671
15.000
301
17.109
15.000
5
0.128
0.200
225
0.013
0.020
1703
0.003
0.020
261
2.278
1.500
875
0.961
1.500
354
3.324
2.000
1435
4.823
3.000
669
6.236
4.500
669
2.250
3.000
2631
0.305
0.293
0.934
309
5631
20
87.34
0.91
17.27
3QM9
88244
82720
2.0
0.056
1
31.21
5.9
93.74
0.301
0.91
0.934
5.9
1
5.5
87.34
data collection
HKL-2000
refinement
REFMAC
5.5.0109
data reduction
DENZO
data scaling
SCALEPACK
Blackfin tuna azido-myoglobin, atomic resolution
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
5
N
N
A
ALA
2
A
ALA
2
HELX_P
A
LYS
9
A
LYS
9
1
1
8
A
TRP
11
A
TRP
11
HELX_P
A
ALA
16
A
ALA
16
1
2
6
A
ASP
17
A
ASP
17
HELX_P
A
HIS
33
A
HIS
33
1
3
17
A
HIS
33
A
HIS
33
HELX_P
A
LYS
38
A
LYS
38
1
4
6
A
ALA
47
A
ALA
47
HELX_P
A
ILE
51
A
ILE
51
5
5
5
A
ASN
54
A
ASN
54
HELX_P
A
ALA
74
A
ALA
74
1
6
21
A
HIS
78
A
HIS
78
HELX_P
A
LYS
92
A
LYS
92
1
7
15
A
ILE
97
A
ILE
97
HELX_P
A
ALA
115
A
ALA
115
1
8
19
A
ASP
118
A
ASP
118
HELX_P
A
LEU
143
A
LEU
143
1
9
26
covale
1.333
both
A
ACE
1
A
C
ACE
1
1_555
A
ALA
2
A
N
ALA
2
1_555
metalc
1.963
A
A
HIS
89
A
NE2
HIS
89
1_555
A
HEM
201
B
FE
HEM
1_555
metalc
2.288
B
A
HIS
89
A
NE2
HIS
89
1_555
A
HEM
201
B
FE
HEM
1_555
metalc
2.104
A
A
A
HEM
201
B
FE
HEM
1_555
A
AZI
202
C
N1
AZI
1_555
TRANSPORT PROTEIN
myoglobin, oxygen storage, heme, iron, TRANSPORT PROTEIN
3QM9
PDB
1
3QM9
1
146
3QM9
1
146
3QM9
A
1
1
146
BINDING SITE FOR RESIDUE HEM A 201
A
HEM
201
Software
22
BINDING SITE FOR RESIDUE AZI A 202
A
AZI
202
Software
6
BINDING SITE FOR RESIDUE EDO A 203
A
EDO
203
Software
6
BINDING SITE FOR RESIDUE EDO A 204
A
EDO
204
Software
3
BINDING SITE FOR RESIDUE EDO A 205
A
EDO
205
Software
4
BINDING SITE FOR RESIDUE EDO A 206
A
EDO
206
Software
4
BINDING SITE FOR RESIDUE EDO A 207
A
EDO
207
Software
8
BINDING SITE FOR RESIDUE EDO A 208
A
EDO
208
Software
6
A
LEU
39
A
LEU
39
22
1_555
A
PHE
40
A
PHE
40
22
1_555
A
LYS
42
A
LYS
42
22
1_555
A
HIS
60
A
HIS
60
22
1_555
A
THR
63
A
THR
63
22
1_555
A
VAL
64
A
VAL
64
22
1_555
A
LEU
68
A
LEU
68
22
1_555
A
LEU
85
A
LEU
85
22
1_555
A
SER
88
A
SER
88
22
1_555
A
HIS
89
A
HIS
89
22
1_555
A
HIS
93
A
HIS
93
22
1_555
A
ILE
95
A
ILE
95
22
1_555
A
ASN
99
A
ASN
99
22
1_555
A
PHE
100
A
PHE
100
22
1_555
A
AZI
202
C
AZI
22
1_555
A
HOH
324
J
HOH
22
1_555
A
HOH
339
J
HOH
22
1_555
A
HOH
343
J
HOH
22
1_555
A
HOH
375
J
HOH
22
1_555
A
HOH
381
J
HOH
22
1_555
A
HOH
393
J
HOH
22
1_555
A
HOH
437
J
HOH
22
1_555
A
PHE
40
A
PHE
40
6
1_555
A
HIS
60
A
HIS
60
6
1_555
A
VAL
64
A
VAL
64
6
1_555
A
ILE
103
A
ILE
103
6
1_555
A
HEM
201
B
HEM
6
1_555
A
HOH
339
J
HOH
6
1_555
A
LYS
83
A
LYS
83
6
1_555
A
ASN
87
A
ASN
87
6
1_555
A
ASN
139
A
ASN
139
6
1_555
A
LEU
143
A
LEU
143
6
1_555
A
EDO
204
E
EDO
6
1_555
A
HOH
444
J
HOH
6
1_555
A
GLU
142
A
GLU
142
3
1_555
A
EDO
203
D
EDO
3
1_555
A
HOH
443
J
HOH
3
1_555
A
ALA
52
A
ALA
52
4
1_555
A
GLY
53
A
GLY
53
4
1_555
A
SER
58
A
SER
58
4
1_555
A
HOH
448
J
HOH
4
1_555
A
ALA
47
A
ALA
47
4
1_555
A
GLN
48
A
GLN
48
4
1_555
A
HOH
311
J
HOH
4
1_555
A
HOH
400
J
HOH
4
1_555
A
ALA
90
A
ALA
90
8
1_555
A
LYS
94
A
LYS
94
8
1_555
A
ILE
95
A
ILE
95
8
1_555
A
TYR
140
A
TYR
140
8
1_555
A
PHE
145
A
PHE
145
8
1_555
A
HOH
391
J
HOH
8
1_555
A
HOH
432
J
HOH
8
1_555
A
HOH
449
J
HOH
8
1_556
A
GLY
53
A
GLY
53
6
1_555
A
ASN
54
A
ASN
54
6
1_555
A
ALA
55
A
ALA
55
6
1_555
A
ALA
56
A
ALA
56
6
1_555
A
HOH
453
J
HOH
6
1_555
A
HOH
467
J
HOH
6
1_455
4
P 1 21 1