0.012120
0.000000
0.000000
0.000000
0.009865
0.000000
0.000000
0.000000
0.006441
0.00000
0.00000
0.00000
Barta, M.L.
Skaff, A.D.
McWhorter, W.J.
Miziorko, H.M.
Geisbrecht, B.V.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
82.505
101.367
155.255
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C6 H13 F O10 P2
326.107
(3R)-3-(fluoromethyl)-3-hydroxy-5-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}pentanoic acid
6-fluoromevalonate 5-diphosphate
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
O
N
89
N
O
N
90
N
O
N
91
N
O
N
92
N
O
N
93
N
O
N
94
N
O
N
95
N
O
N
96
N
F
N
97
N
C
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
C
N
104
R
C
N
105
N
P
N
106
N
P
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
N
N
121
S
C
N
122
N
C
N
123
N
O
N
124
N
C
N
125
N
C
N
126
N
C
N
127
N
O
N
128
N
N
N
129
N
O
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
N
N
141
S
C
N
142
N
C
N
143
N
O
N
144
N
C
N
145
N
C
N
146
N
C
N
147
N
O
N
148
N
O
N
149
N
O
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
N
N
160
N
C
N
161
N
C
N
162
N
O
N
163
N
O
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
C
N
170
N
O
N
171
N
C
N
172
N
O
N
173
N
C
N
174
N
O
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
Y
188
N
C
Y
189
N
N
Y
190
N
C
Y
191
N
C
Y
192
N
N
N
193
N
O
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
O
N
205
N
H
N
206
N
H
N
207
N
N
N
208
S
C
N
209
N
C
N
210
N
O
N
211
S
C
N
212
N
C
N
213
N
C
N
214
N
C
N
215
N
O
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
N
N
230
S
C
N
231
N
C
N
232
N
O
N
233
N
C
N
234
N
C
N
235
N
C
N
236
N
C
N
237
N
O
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
C
N
259
N
N
N
260
N
O
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
N
N
277
S
C
N
278
N
C
N
279
N
O
N
280
N
C
N
281
N
C
N
282
N
S
N
283
N
C
N
284
N
O
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
N
N
297
S
C
N
298
N
C
N
299
N
O
N
300
N
C
Y
301
N
C
Y
302
N
C
Y
303
N
C
Y
304
N
C
Y
305
N
C
Y
306
N
C
N
307
N
O
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
N
N
320
S
C
N
321
N
C
N
322
N
O
N
323
N
C
N
324
N
C
N
325
N
C
N
326
N
O
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
N
N
337
S
C
N
338
N
C
N
339
N
O
N
340
N
C
N
341
N
O
N
342
N
O
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
N
N
351
S
C
N
352
N
C
N
353
N
O
N
354
R
C
N
355
N
O
N
356
N
C
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
N
N
368
S
C
N
369
N
C
N
370
N
O
N
371
N
C
Y
372
N
C
Y
373
N
C
Y
374
N
C
Y
375
N
N
Y
376
N
C
Y
377
N
C
Y
378
N
C
Y
379
N
C
Y
380
N
C
N
381
N
O
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
N
N
395
S
C
N
396
N
C
N
397
N
O
N
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
C
N
405
N
O
N
406
N
O
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
N
N
419
S
C
N
420
N
C
N
421
N
O
N
422
N
C
N
423
N
C
N
424
N
C
N
425
N
O
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
doub
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
doub
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
doub
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
doub
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
doub
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
Y
184
N
sing
Y
185
N
doub
Y
186
N
doub
N
187
N
sing
Y
188
N
sing
N
189
N
sing
Y
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
doub
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
doub
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
doub
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
doub
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
Y
292
N
doub
Y
293
N
sing
Y
294
N
sing
N
295
N
sing
Y
296
N
doub
N
297
N
sing
Y
298
N
doub
N
299
N
sing
Y
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
doub
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
doub
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
Y
361
N
doub
Y
362
N
sing
Y
363
N
sing
N
364
N
sing
Y
365
N
doub
Y
366
N
sing
Y
367
N
sing
N
368
N
sing
Y
369
N
sing
Y
370
N
doub
N
371
N
sing
Y
372
N
doub
N
373
N
sing
Y
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
doub
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
Y
389
N
doub
Y
390
N
sing
Y
391
N
sing
N
392
N
sing
Y
393
N
doub
N
394
N
sing
Y
395
N
doub
N
396
N
sing
Y
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
doub
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
286
23900
23910
10.1074/jbc.M111.242016
21561869
Crystal structures of Staphylococcus epidermidis mevalonate diphosphate decarboxylase bound to inhibitory analogs reveal new insight into substrate binding and catalysis.
2011
10.2210/pdb3qt8/pdb
pdb_00003qt8
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2011-02-05
MARMOSAIC 225 mm CCD
double crystal - liquid nitrogen cooled
SINGLE WAVELENGTH
M
x-ray
1
1.000
1.0
22-BM
APS
1.000
SYNCHROTRON
APS BEAMLINE 22-BM
36854.395
Mevalonate diphosphate decarboxylase
4.1.1.33
S192A
2
man
polymer
326.107
(3R)-3-(fluoromethyl)-3-hydroxy-5-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}pentanoic acid
2
syn
non-polymer
92.094
GLYCEROL
1
syn
non-polymer
18.015
water
278
nat
water
Diphosphomevalonate decarboxylase
no
no
GSTGSMVKSGKARAHTNIALIKYWGKADETYIIPMNNSLSVTLDRFYTETKVTFDPDFTEDCLILNGNEVNAKEKEKIQN
YMNIVRDLAGNRLHARIESENYVPTAAGLASSASAYAALAAACNEALSLNLSDTDLSRLARRGSGSASRSIFGGFAEWEK
GHDDLTSYAHGINSNGWEKDLSMIFVVINNQSKKVSARSGMSLTRDTSRFYQYWLDHVDEDLNEAKEAVKNQDFQRLGEV
IEANGLRMHATNLGAQPPFTYLVQESYDAMAIVEQCRKANLPCYFTMDAGPNVKVLVEKKNKQAVMEQFLKVFDESKIIA
SDIISSGVEIIK
GSTGSMVKSGKARAHTNIALIKYWGKADETYIIPMNNSLSVTLDRFYTETKVTFDPDFTEDCLILNGNEVNAKEKEKIQN
YMNIVRDLAGNRLHARIESENYVPTAAGLASSASAYAALAAACNEALSLNLSDTDLSRLARRGSGSASRSIFGGFAEWEK
GHDDLTSYAHGINSNGWEKDLSMIFVVINNQSKKVSARSGMSLTRDTSRFYQYWLDHVDEDLNEAKEAVKNQDFQRLGEV
IEANGLRMHATNLGAQPPFTYLVQESYDAMAIVEQCRKANLPCYFTMDAGPNVKVLVEKKNKQAVMEQFLKVFDESKIIA
SDIISSGVEIIK
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
mvaD
1282
Staphylococcus epidermidis
562
Escherichia coli
1
2.20
44.14
VAPOR DIFFUSION, HANGING DROP
7.0
0.25 M sodium formate, 16% w/v PEG3350, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Database references
Data collection
Database references
Derived calculations
Refinement description
1
0
2011-05-11
1
1
2011-07-13
1
2
2011-11-23
1
3
2023-09-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Staphylococcus epidermidis mevalonate diphosphate decarboxylase
Staphylococcus epidermidis mevalonate diphosphate decarboxylase complexed with inhibitor DPGP
Staphylococcus epidermidis mevalonate diphosphate decarboxylase complexed with inhibitor 6-FMVAPP
RCSB
Y
RCSB
2011-02-22
REL
REL
FM0
(3R)-3-(fluoromethyl)-3-hydroxy-5-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}pentanoic acid
GOL
GLYCEROL
HOH
water
3QT5
PDB ENTRY 3QT5
PDB
experimental model
FM0
1
2
FM0
FM0
328
A
GOL
3968
3
GOL
GOL
3968
A
FM0
1
2
FM0
FM0
328
B
HOH
2
4
HOH
HOH
329
A
HOH
3
4
HOH
HOH
330
A
HOH
4
4
HOH
HOH
331
A
HOH
5
4
HOH
HOH
332
A
HOH
6
4
HOH
HOH
333
A
HOH
7
4
HOH
HOH
334
A
HOH
8
4
HOH
HOH
335
A
HOH
10
4
HOH
HOH
336
A
HOH
11
4
HOH
HOH
337
A
HOH
12
4
HOH
HOH
338
A
HOH
14
4
HOH
HOH
339
A
HOH
15
4
HOH
HOH
340
A
HOH
16
4
HOH
HOH
341
A
HOH
17
4
HOH
HOH
342
A
HOH
20
4
HOH
HOH
343
A
HOH
23
4
HOH
HOH
344
A
HOH
25
4
HOH
HOH
345
A
HOH
29
4
HOH
HOH
346
A
HOH
30
4
HOH
HOH
347
A
HOH
31
4
HOH
HOH
348
A
HOH
33
4
HOH
HOH
349
A
HOH
35
4
HOH
HOH
350
A
HOH
40
4
HOH
HOH
351
A
HOH
41
4
HOH
HOH
352
A
HOH
42
4
HOH
HOH
353
A
HOH
43
4
HOH
HOH
354
A
HOH
44
4
HOH
HOH
355
A
HOH
47
4
HOH
HOH
356
A
HOH
49
4
HOH
HOH
357
A
HOH
53
4
HOH
HOH
358
A
HOH
55
4
HOH
HOH
359
A
HOH
57
4
HOH
HOH
360
A
HOH
59
4
HOH
HOH
361
A
HOH
60
4
HOH
HOH
362
A
HOH
61
4
HOH
HOH
363
A
HOH
65
4
HOH
HOH
364
A
HOH
66
4
HOH
HOH
365
A
HOH
67
4
HOH
HOH
366
A
HOH
68
4
HOH
HOH
367
A
HOH
72
4
HOH
HOH
368
A
HOH
73
4
HOH
HOH
369
A
HOH
75
4
HOH
HOH
370
A
HOH
77
4
HOH
HOH
371
A
HOH
82
4
HOH
HOH
372
A
HOH
84
4
HOH
HOH
373
A
HOH
85
4
HOH
HOH
374
A
HOH
86
4
HOH
HOH
375
A
HOH
90
4
HOH
HOH
376
A
HOH
91
4
HOH
HOH
377
A
HOH
95
4
HOH
HOH
378
A
HOH
96
4
HOH
HOH
379
A
HOH
97
4
HOH
HOH
380
A
HOH
100
4
HOH
HOH
381
A
HOH
102
4
HOH
HOH
382
A
HOH
103
4
HOH
HOH
383
A
HOH
104
4
HOH
HOH
384
A
HOH
105
4
HOH
HOH
385
A
HOH
106
4
HOH
HOH
386
A
HOH
108
4
HOH
HOH
387
A
HOH
109
4
HOH
HOH
388
A
HOH
110
4
HOH
HOH
389
A
HOH
111
4
HOH
HOH
390
A
HOH
113
4
HOH
HOH
391
A
HOH
114
4
HOH
HOH
392
A
HOH
117
4
HOH
HOH
393
A
HOH
118
4
HOH
HOH
394
A
HOH
120
4
HOH
HOH
395
A
HOH
122
4
HOH
HOH
396
A
HOH
123
4
HOH
HOH
397
A
HOH
124
4
HOH
HOH
398
A
HOH
125
4
HOH
HOH
399
A
HOH
127
4
HOH
HOH
400
A
HOH
128
4
HOH
HOH
401
A
HOH
129
4
HOH
HOH
402
A
HOH
130
4
HOH
HOH
403
A
HOH
133
4
HOH
HOH
404
A
HOH
134
4
HOH
HOH
405
A
HOH
135
4
HOH
HOH
406
A
HOH
136
4
HOH
HOH
407
A
HOH
138
4
HOH
HOH
408
A
HOH
139
4
HOH
HOH
409
A
HOH
143
4
HOH
HOH
410
A
HOH
149
4
HOH
HOH
411
A
HOH
155
4
HOH
HOH
412
A
HOH
156
4
HOH
HOH
413
A
HOH
157
4
HOH
HOH
414
A
HOH
159
4
HOH
HOH
415
A
HOH
160
4
HOH
HOH
416
A
HOH
162
4
HOH
HOH
417
A
HOH
163
4
HOH
HOH
418
A
HOH
165
4
HOH
HOH
419
A
HOH
166
4
HOH
HOH
420
A
HOH
168
4
HOH
HOH
421
A
HOH
173
4
HOH
HOH
422
A
HOH
175
4
HOH
HOH
423
A
HOH
176
4
HOH
HOH
424
A
HOH
178
4
HOH
HOH
425
A
HOH
181
4
HOH
HOH
426
A
HOH
183
4
HOH
HOH
427
A
HOH
185
4
HOH
HOH
428
A
HOH
187
4
HOH
HOH
429
A
HOH
188
4
HOH
HOH
430
A
HOH
189
4
HOH
HOH
431
A
HOH
190
4
HOH
HOH
432
A
HOH
192
4
HOH
HOH
433
A
HOH
195
4
HOH
HOH
434
A
HOH
196
4
HOH
HOH
435
A
HOH
197
4
HOH
HOH
436
A
HOH
199
4
HOH
HOH
437
A
HOH
201
4
HOH
HOH
438
A
HOH
202
4
HOH
HOH
439
A
HOH
205
4
HOH
HOH
440
A
HOH
206
4
HOH
HOH
441
A
HOH
207
4
HOH
HOH
442
A
HOH
208
4
HOH
HOH
443
A
HOH
210
4
HOH
HOH
444
A
HOH
212
4
HOH
HOH
445
A
HOH
213
4
HOH
HOH
446
A
HOH
214
4
HOH
HOH
447
A
HOH
215
4
HOH
HOH
448
A
HOH
216
4
HOH
HOH
449
A
HOH
217
4
HOH
HOH
450
A
HOH
219
4
HOH
HOH
451
A
HOH
220
4
HOH
HOH
452
A
HOH
222
4
HOH
HOH
453
A
HOH
223
4
HOH
HOH
454
A
HOH
225
4
HOH
HOH
455
A
HOH
227
4
HOH
HOH
456
A
HOH
229
4
HOH
HOH
457
A
HOH
231
4
HOH
HOH
458
A
HOH
235
4
HOH
HOH
459
A
HOH
236
4
HOH
HOH
460
A
HOH
237
4
HOH
HOH
461
A
HOH
238
4
HOH
HOH
462
A
HOH
239
4
HOH
HOH
463
A
HOH
240
4
HOH
HOH
464
A
HOH
242
4
HOH
HOH
465
A
HOH
244
4
HOH
HOH
466
A
HOH
245
4
HOH
HOH
467
A
HOH
246
4
HOH
HOH
468
A
HOH
249
4
HOH
HOH
469
A
HOH
250
4
HOH
HOH
470
A
HOH
251
4
HOH
HOH
471
A
HOH
252
4
HOH
HOH
472
A
HOH
253
4
HOH
HOH
473
A
HOH
254
4
HOH
HOH
474
A
HOH
255
4
HOH
HOH
475
A
HOH
256
4
HOH
HOH
476
A
HOH
259
4
HOH
HOH
477
A
HOH
261
4
HOH
HOH
478
A
HOH
265
4
HOH
HOH
479
A
HOH
266
4
HOH
HOH
480
A
HOH
268
4
HOH
HOH
481
A
HOH
269
4
HOH
HOH
482
A
HOH
275
4
HOH
HOH
483
A
HOH
276
4
HOH
HOH
484
A
HOH
1
4
HOH
HOH
329
B
HOH
9
4
HOH
HOH
330
B
HOH
13
4
HOH
HOH
331
B
HOH
18
4
HOH
HOH
332
B
HOH
19
4
HOH
HOH
333
B
HOH
21
4
HOH
HOH
334
B
HOH
22
4
HOH
HOH
335
B
HOH
24
4
HOH
HOH
336
B
HOH
26
4
HOH
HOH
337
B
HOH
27
4
HOH
HOH
338
B
HOH
28
4
HOH
HOH
339
B
HOH
32
4
HOH
HOH
340
B
HOH
34
4
HOH
HOH
341
B
HOH
36
4
HOH
HOH
342
B
HOH
37
4
HOH
HOH
343
B
HOH
38
4
HOH
HOH
344
B
HOH
39
4
HOH
HOH
345
B
HOH
45
4
HOH
HOH
346
B
HOH
46
4
HOH
HOH
347
B
HOH
48
4
HOH
HOH
348
B
HOH
50
4
HOH
HOH
349
B
HOH
51
4
HOH
HOH
350
B
HOH
52
4
HOH
HOH
351
B
HOH
54
4
HOH
HOH
352
B
HOH
56
4
HOH
HOH
353
B
HOH
58
4
HOH
HOH
354
B
HOH
62
4
HOH
HOH
355
B
HOH
63
4
HOH
HOH
356
B
HOH
64
4
HOH
HOH
357
B
HOH
69
4
HOH
HOH
358
B
HOH
70
4
HOH
HOH
359
B
HOH
71
4
HOH
HOH
360
B
HOH
74
4
HOH
HOH
361
B
HOH
76
4
HOH
HOH
362
B
HOH
78
4
HOH
HOH
363
B
HOH
79
4
HOH
HOH
364
B
HOH
80
4
HOH
HOH
365
B
HOH
81
4
HOH
HOH
366
B
HOH
83
4
HOH
HOH
367
B
HOH
87
4
HOH
HOH
368
B
HOH
88
4
HOH
HOH
369
B
HOH
89
4
HOH
HOH
370
B
HOH
92
4
HOH
HOH
371
B
HOH
93
4
HOH
HOH
372
B
HOH
94
4
HOH
HOH
373
B
HOH
98
4
HOH
HOH
374
B
HOH
99
4
HOH
HOH
375
B
HOH
101
4
HOH
HOH
376
B
HOH
107
4
HOH
HOH
377
B
HOH
112
4
HOH
HOH
378
B
HOH
115
4
HOH
HOH
379
B
HOH
116
4
HOH
HOH
380
B
HOH
119
4
HOH
HOH
381
B
HOH
121
4
HOH
HOH
382
B
HOH
126
4
HOH
HOH
383
B
HOH
131
4
HOH
HOH
384
B
HOH
132
4
HOH
HOH
385
B
HOH
137
4
HOH
HOH
386
B
HOH
140
4
HOH
HOH
387
B
HOH
141
4
HOH
HOH
388
B
HOH
142
4
HOH
HOH
389
B
HOH
144
4
HOH
HOH
390
B
HOH
145
4
HOH
HOH
391
B
HOH
146
4
HOH
HOH
392
B
HOH
147
4
HOH
HOH
393
B
HOH
148
4
HOH
HOH
394
B
HOH
150
4
HOH
HOH
395
B
HOH
151
4
HOH
HOH
396
B
HOH
152
4
HOH
HOH
397
B
HOH
153
4
HOH
HOH
398
B
HOH
154
4
HOH
HOH
399
B
HOH
158
4
HOH
HOH
400
B
HOH
161
4
HOH
HOH
401
B
HOH
164
4
HOH
HOH
402
B
HOH
167
4
HOH
HOH
403
B
HOH
169
4
HOH
HOH
404
B
HOH
170
4
HOH
HOH
405
B
HOH
171
4
HOH
HOH
406
B
HOH
172
4
HOH
HOH
407
B
HOH
174
4
HOH
HOH
408
B
HOH
177
4
HOH
HOH
409
B
HOH
179
4
HOH
HOH
410
B
HOH
180
4
HOH
HOH
411
B
HOH
182
4
HOH
HOH
412
B
HOH
184
4
HOH
HOH
413
B
HOH
186
4
HOH
HOH
414
B
HOH
191
4
HOH
HOH
415
B
HOH
193
4
HOH
HOH
416
B
HOH
194
4
HOH
HOH
417
B
HOH
198
4
HOH
HOH
418
B
HOH
200
4
HOH
HOH
419
B
HOH
203
4
HOH
HOH
420
B
HOH
204
4
HOH
HOH
421
B
HOH
209
4
HOH
HOH
422
B
HOH
211
4
HOH
HOH
423
B
HOH
218
4
HOH
HOH
424
B
HOH
221
4
HOH
HOH
425
B
HOH
224
4
HOH
HOH
426
B
HOH
226
4
HOH
HOH
427
B
HOH
228
4
HOH
HOH
428
B
HOH
230
4
HOH
HOH
429
B
HOH
232
4
HOH
HOH
430
B
HOH
233
4
HOH
HOH
431
B
HOH
234
4
HOH
HOH
432
B
HOH
241
4
HOH
HOH
433
B
HOH
243
4
HOH
HOH
434
B
HOH
247
4
HOH
HOH
435
B
HOH
248
4
HOH
HOH
436
B
HOH
257
4
HOH
HOH
437
B
HOH
258
4
HOH
HOH
438
B
HOH
260
4
HOH
HOH
439
B
HOH
262
4
HOH
HOH
440
B
HOH
263
4
HOH
HOH
441
B
HOH
264
4
HOH
HOH
442
B
HOH
267
4
HOH
HOH
443
B
HOH
270
4
HOH
HOH
444
B
HOH
271
4
HOH
HOH
445
B
HOH
272
4
HOH
HOH
446
B
HOH
273
4
HOH
HOH
447
B
HOH
274
4
HOH
HOH
448
B
HOH
277
4
HOH
HOH
449
B
HOH
278
4
HOH
HOH
450
B
GLY
-4
n
1
GLY
-4
A
SER
-3
n
2
SER
-3
A
THR
-2
n
3
THR
-2
A
GLY
-1
n
4
GLY
-1
A
SER
0
n
5
SER
0
A
MET
1
n
6
MET
1
A
VAL
2
n
7
VAL
2
A
LYS
3
n
8
LYS
3
A
SER
4
n
9
SER
4
A
GLY
5
n
10
GLY
5
A
LYS
6
n
11
LYS
6
A
ALA
7
n
12
ALA
7
A
ARG
8
n
13
ARG
8
A
ALA
9
n
14
ALA
9
A
HIS
10
n
15
HIS
10
A
THR
11
n
16
THR
11
A
ASN
12
n
17
ASN
12
A
ILE
13
n
18
ILE
13
A
ALA
14
n
19
ALA
14
A
LEU
15
n
20
LEU
15
A
ILE
16
n
21
ILE
16
A
LYS
17
n
22
LYS
17
A
TYR
18
n
23
TYR
18
A
TRP
19
n
24
TRP
19
A
GLY
20
n
25
GLY
20
A
LYS
21
n
26
LYS
21
A
ALA
22
n
27
ALA
22
A
ASP
23
n
28
ASP
23
A
GLU
24
n
29
GLU
24
A
THR
25
n
30
THR
25
A
TYR
26
n
31
TYR
26
A
ILE
27
n
32
ILE
27
A
ILE
28
n
33
ILE
28
A
PRO
29
n
34
PRO
29
A
MET
30
n
35
MET
30
A
ASN
31
n
36
ASN
31
A
ASN
32
n
37
ASN
32
A
SER
33
n
38
SER
33
A
LEU
34
n
39
LEU
34
A
SER
35
n
40
SER
35
A
VAL
36
n
41
VAL
36
A
THR
37
n
42
THR
37
A
LEU
38
n
43
LEU
38
A
ASP
39
n
44
ASP
39
A
ARG
40
n
45
ARG
40
A
PHE
41
n
46
PHE
41
A
TYR
42
n
47
TYR
42
A
THR
43
n
48
THR
43
A
GLU
44
n
49
GLU
44
A
THR
45
n
50
THR
45
A
LYS
46
n
51
LYS
46
A
VAL
47
n
52
VAL
47
A
THR
48
n
53
THR
48
A
PHE
49
n
54
PHE
49
A
ASP
50
n
55
ASP
50
A
PRO
51
n
56
PRO
51
A
ASP
52
n
57
ASP
52
A
PHE
53
n
58
PHE
53
A
THR
54
n
59
THR
54
A
GLU
55
n
60
GLU
55
A
ASP
56
n
61
ASP
56
A
CYS
57
n
62
CYS
57
A
LEU
58
n
63
LEU
58
A
ILE
59
n
64
ILE
59
A
LEU
60
n
65
LEU
60
A
ASN
61
n
66
ASN
61
A
GLY
62
n
67
GLY
62
A
ASN
63
n
68
ASN
63
A
GLU
64
n
69
GLU
64
A
VAL
65
n
70
VAL
65
A
ASN
66
n
71
ASN
66
A
ALA
67
n
72
ALA
67
A
LYS
68
n
73
LYS
68
A
GLU
69
n
74
GLU
69
A
LYS
70
n
75
LYS
70
A
GLU
71
n
76
GLU
71
A
LYS
72
n
77
LYS
72
A
ILE
73
n
78
ILE
73
A
GLN
74
n
79
GLN
74
A
ASN
75
n
80
ASN
75
A
TYR
76
n
81
TYR
76
A
MET
77
n
82
MET
77
A
ASN
78
n
83
ASN
78
A
ILE
79
n
84
ILE
79
A
VAL
80
n
85
VAL
80
A
ARG
81
n
86
ARG
81
A
ASP
82
n
87
ASP
82
A
LEU
83
n
88
LEU
83
A
ALA
84
n
89
ALA
84
A
GLY
85
n
90
GLY
85
A
ASN
86
n
91
ASN
86
A
ARG
87
n
92
ARG
87
A
LEU
88
n
93
LEU
88
A
HIS
89
n
94
HIS
89
A
ALA
90
n
95
ALA
90
A
ARG
91
n
96
ARG
91
A
ILE
92
n
97
ILE
92
A
GLU
93
n
98
GLU
93
A
SER
94
n
99
SER
94
A
GLU
95
n
100
GLU
95
A
ASN
96
n
101
ASN
96
A
TYR
97
n
102
TYR
97
A
VAL
98
n
103
VAL
98
A
PRO
99
n
104
PRO
99
A
THR
100
n
105
THR
100
A
ALA
101
n
106
ALA
101
A
ALA
102
n
107
ALA
102
A
GLY
103
n
108
GLY
103
A
LEU
104
n
109
LEU
104
A
ALA
105
n
110
ALA
105
A
SER
106
n
111
SER
106
A
SER
107
n
112
SER
107
A
ALA
108
n
113
ALA
108
A
SER
109
n
114
SER
109
A
ALA
110
n
115
ALA
110
A
TYR
111
n
116
TYR
111
A
ALA
112
n
117
ALA
112
A
ALA
113
n
118
ALA
113
A
LEU
114
n
119
LEU
114
A
ALA
115
n
120
ALA
115
A
ALA
116
n
121
ALA
116
A
ALA
117
n
122
ALA
117
A
CYS
118
n
123
CYS
118
A
ASN
119
n
124
ASN
119
A
GLU
120
n
125
GLU
120
A
ALA
121
n
126
ALA
121
A
LEU
122
n
127
LEU
122
A
SER
123
n
128
SER
123
A
LEU
124
n
129
LEU
124
A
ASN
125
n
130
ASN
125
A
LEU
126
n
131
LEU
126
A
SER
127
n
132
SER
127
A
ASP
128
n
133
ASP
128
A
THR
129
n
134
THR
129
A
ASP
130
n
135
ASP
130
A
LEU
131
n
136
LEU
131
A
SER
132
n
137
SER
132
A
ARG
133
n
138
ARG
133
A
LEU
134
n
139
LEU
134
A
ALA
135
n
140
ALA
135
A
ARG
136
n
141
ARG
136
A
ARG
137
n
142
ARG
137
A
GLY
138
n
143
GLY
138
A
SER
139
n
144
SER
139
A
GLY
140
n
145
GLY
140
A
SER
141
n
146
SER
141
A
ALA
142
n
147
ALA
142
A
SER
143
n
148
SER
143
A
ARG
144
n
149
ARG
144
A
SER
145
n
150
SER
145
A
ILE
146
n
151
ILE
146
A
PHE
147
n
152
PHE
147
A
GLY
148
n
153
GLY
148
A
GLY
149
n
154
GLY
149
A
PHE
150
n
155
PHE
150
A
ALA
151
n
156
ALA
151
A
GLU
152
n
157
GLU
152
A
TRP
153
n
158
TRP
153
A
GLU
154
n
159
GLU
154
A
LYS
155
n
160
LYS
155
A
GLY
156
n
161
GLY
156
A
HIS
157
n
162
HIS
157
A
ASP
158
n
163
ASP
158
A
ASP
159
n
164
ASP
159
A
LEU
160
n
165
LEU
160
A
THR
161
n
166
THR
161
A
SER
162
n
167
SER
162
A
TYR
163
n
168
TYR
163
A
ALA
164
n
169
ALA
164
A
HIS
165
n
170
HIS
165
A
GLY
166
n
171
GLY
166
A
ILE
167
n
172
ILE
167
A
ASN
168
n
173
ASN
168
A
SER
169
n
174
SER
169
A
ASN
170
n
175
ASN
170
A
GLY
171
n
176
GLY
171
A
TRP
172
n
177
TRP
172
A
GLU
173
n
178
GLU
173
A
LYS
174
n
179
LYS
174
A
ASP
175
n
180
ASP
175
A
LEU
176
n
181
LEU
176
A
SER
177
n
182
SER
177
A
MET
178
n
183
MET
178
A
ILE
179
n
184
ILE
179
A
PHE
180
n
185
PHE
180
A
VAL
181
n
186
VAL
181
A
VAL
182
n
187
VAL
182
A
ILE
183
n
188
ILE
183
A
n
189
184
A
n
190
185
A
n
191
186
A
n
192
187
A
LYS
188
n
193
LYS
188
A
LYS
189
n
194
LYS
189
A
VAL
190
n
195
VAL
190
A
SER
191
n
196
SER
191
A
ALA
192
n
197
ALA
192
A
ARG
193
n
198
ARG
193
A
SER
194
n
199
SER
194
A
GLY
195
n
200
GLY
195
A
MET
196
n
201
MET
196
A
SER
197
n
202
SER
197
A
LEU
198
n
203
LEU
198
A
THR
199
n
204
THR
199
A
ARG
200
n
205
ARG
200
A
ASP
201
n
206
ASP
201
A
THR
202
n
207
THR
202
A
SER
203
n
208
SER
203
A
ARG
204
n
209
ARG
204
A
PHE
205
n
210
PHE
205
A
TYR
206
n
211
TYR
206
A
GLN
207
n
212
GLN
207
A
TYR
208
n
213
TYR
208
A
TRP
209
n
214
TRP
209
A
LEU
210
n
215
LEU
210
A
ASP
211
n
216
ASP
211
A
HIS
212
n
217
HIS
212
A
VAL
213
n
218
VAL
213
A
ASP
214
n
219
ASP
214
A
GLU
215
n
220
GLU
215
A
ASP
216
n
221
ASP
216
A
LEU
217
n
222
LEU
217
A
ASN
218
n
223
ASN
218
A
GLU
219
n
224
GLU
219
A
ALA
220
n
225
ALA
220
A
LYS
221
n
226
LYS
221
A
GLU
222
n
227
GLU
222
A
ALA
223
n
228
ALA
223
A
VAL
224
n
229
VAL
224
A
LYS
225
n
230
LYS
225
A
ASN
226
n
231
ASN
226
A
GLN
227
n
232
GLN
227
A
ASP
228
n
233
ASP
228
A
PHE
229
n
234
PHE
229
A
GLN
230
n
235
GLN
230
A
ARG
231
n
236
ARG
231
A
LEU
232
n
237
LEU
232
A
GLY
233
n
238
GLY
233
A
GLU
234
n
239
GLU
234
A
VAL
235
n
240
VAL
235
A
ILE
236
n
241
ILE
236
A
GLU
237
n
242
GLU
237
A
ALA
238
n
243
ALA
238
A
ASN
239
n
244
ASN
239
A
GLY
240
n
245
GLY
240
A
LEU
241
n
246
LEU
241
A
ARG
242
n
247
ARG
242
A
MET
243
n
248
MET
243
A
HIS
244
n
249
HIS
244
A
ALA
245
n
250
ALA
245
A
THR
246
n
251
THR
246
A
ASN
247
n
252
ASN
247
A
LEU
248
n
253
LEU
248
A
GLY
249
n
254
GLY
249
A
ALA
250
n
255
ALA
250
A
GLN
251
n
256
GLN
251
A
PRO
252
n
257
PRO
252
A
PRO
253
n
258
PRO
253
A
PHE
254
n
259
PHE
254
A
THR
255
n
260
THR
255
A
TYR
256
n
261
TYR
256
A
LEU
257
n
262
LEU
257
A
VAL
258
n
263
VAL
258
A
GLN
259
n
264
GLN
259
A
GLU
260
n
265
GLU
260
A
SER
261
n
266
SER
261
A
TYR
262
n
267
TYR
262
A
ASP
263
n
268
ASP
263
A
ALA
264
n
269
ALA
264
A
MET
265
n
270
MET
265
A
ALA
266
n
271
ALA
266
A
ILE
267
n
272
ILE
267
A
VAL
268
n
273
VAL
268
A
GLU
269
n
274
GLU
269
A
GLN
270
n
275
GLN
270
A
CYS
271
n
276
CYS
271
A
ARG
272
n
277
ARG
272
A
LYS
273
n
278
LYS
273
A
ALA
274
n
279
ALA
274
A
ASN
275
n
280
ASN
275
A
LEU
276
n
281
LEU
276
A
PRO
277
n
282
PRO
277
A
CYS
278
n
283
CYS
278
A
TYR
279
n
284
TYR
279
A
PHE
280
n
285
PHE
280
A
THR
281
n
286
THR
281
A
MET
282
n
287
MET
282
A
ASP
283
n
288
ASP
283
A
ALA
284
n
289
ALA
284
A
GLY
285
n
290
GLY
285
A
PRO
286
n
291
PRO
286
A
ASN
287
n
292
ASN
287
A
VAL
288
n
293
VAL
288
A
LYS
289
n
294
LYS
289
A
VAL
290
n
295
VAL
290
A
LEU
291
n
296
LEU
291
A
VAL
292
n
297
VAL
292
A
GLU
293
n
298
GLU
293
A
LYS
294
n
299
LYS
294
A
LYS
295
n
300
LYS
295
A
ASN
296
n
301
ASN
296
A
LYS
297
n
302
LYS
297
A
GLN
298
n
303
GLN
298
A
ALA
299
n
304
ALA
299
A
VAL
300
n
305
VAL
300
A
MET
301
n
306
MET
301
A
GLU
302
n
307
GLU
302
A
GLN
303
n
308
GLN
303
A
PHE
304
n
309
PHE
304
A
LEU
305
n
310
LEU
305
A
LYS
306
n
311
LYS
306
A
VAL
307
n
312
VAL
307
A
PHE
308
n
313
PHE
308
A
ASP
309
n
314
ASP
309
A
GLU
310
n
315
GLU
310
A
SER
311
n
316
SER
311
A
LYS
312
n
317
LYS
312
A
ILE
313
n
318
ILE
313
A
ILE
314
n
319
ILE
314
A
ALA
315
n
320
ALA
315
A
SER
316
n
321
SER
316
A
ASP
317
n
322
ASP
317
A
ILE
318
n
323
ILE
318
A
ILE
319
n
324
ILE
319
A
SER
320
n
325
SER
320
A
SER
321
n
326
SER
321
A
GLY
322
n
327
GLY
322
A
VAL
323
n
328
VAL
323
A
GLU
324
n
329
GLU
324
A
ILE
325
n
330
ILE
325
A
ILE
326
n
331
ILE
326
A
LYS
327
n
332
LYS
327
A
n
1
-4
B
n
2
-3
B
n
3
-2
B
n
4
-1
B
n
5
0
B
n
6
1
B
VAL
2
n
7
VAL
2
B
LYS
3
n
8
LYS
3
B
SER
4
n
9
SER
4
B
GLY
5
n
10
GLY
5
B
LYS
6
n
11
LYS
6
B
ALA
7
n
12
ALA
7
B
ARG
8
n
13
ARG
8
B
ALA
9
n
14
ALA
9
B
HIS
10
n
15
HIS
10
B
THR
11
n
16
THR
11
B
ASN
12
n
17
ASN
12
B
ILE
13
n
18
ILE
13
B
ALA
14
n
19
ALA
14
B
LEU
15
n
20
LEU
15
B
ILE
16
n
21
ILE
16
B
LYS
17
n
22
LYS
17
B
TYR
18
n
23
TYR
18
B
TRP
19
n
24
TRP
19
B
GLY
20
n
25
GLY
20
B
LYS
21
n
26
LYS
21
B
ALA
22
n
27
ALA
22
B
ASP
23
n
28
ASP
23
B
GLU
24
n
29
GLU
24
B
THR
25
n
30
THR
25
B
TYR
26
n
31
TYR
26
B
ILE
27
n
32
ILE
27
B
ILE
28
n
33
ILE
28
B
PRO
29
n
34
PRO
29
B
MET
30
n
35
MET
30
B
ASN
31
n
36
ASN
31
B
ASN
32
n
37
ASN
32
B
SER
33
n
38
SER
33
B
LEU
34
n
39
LEU
34
B
SER
35
n
40
SER
35
B
VAL
36
n
41
VAL
36
B
THR
37
n
42
THR
37
B
LEU
38
n
43
LEU
38
B
ASP
39
n
44
ASP
39
B
ARG
40
n
45
ARG
40
B
PHE
41
n
46
PHE
41
B
TYR
42
n
47
TYR
42
B
THR
43
n
48
THR
43
B
GLU
44
n
49
GLU
44
B
THR
45
n
50
THR
45
B
LYS
46
n
51
LYS
46
B
VAL
47
n
52
VAL
47
B
THR
48
n
53
THR
48
B
PHE
49
n
54
PHE
49
B
ASP
50
n
55
ASP
50
B
PRO
51
n
56
PRO
51
B
ASP
52
n
57
ASP
52
B
PHE
53
n
58
PHE
53
B
THR
54
n
59
THR
54
B
GLU
55
n
60
GLU
55
B
ASP
56
n
61
ASP
56
B
CYS
57
n
62
CYS
57
B
LEU
58
n
63
LEU
58
B
ILE
59
n
64
ILE
59
B
LEU
60
n
65
LEU
60
B
ASN
61
n
66
ASN
61
B
GLY
62
n
67
GLY
62
B
ASN
63
n
68
ASN
63
B
GLU
64
n
69
GLU
64
B
VAL
65
n
70
VAL
65
B
ASN
66
n
71
ASN
66
B
ALA
67
n
72
ALA
67
B
LYS
68
n
73
LYS
68
B
GLU
69
n
74
GLU
69
B
LYS
70
n
75
LYS
70
B
GLU
71
n
76
GLU
71
B
LYS
72
n
77
LYS
72
B
ILE
73
n
78
ILE
73
B
GLN
74
n
79
GLN
74
B
ASN
75
n
80
ASN
75
B
TYR
76
n
81
TYR
76
B
MET
77
n
82
MET
77
B
ASN
78
n
83
ASN
78
B
ILE
79
n
84
ILE
79
B
VAL
80
n
85
VAL
80
B
ARG
81
n
86
ARG
81
B
ASP
82
n
87
ASP
82
B
LEU
83
n
88
LEU
83
B
ALA
84
n
89
ALA
84
B
GLY
85
n
90
GLY
85
B
ASN
86
n
91
ASN
86
B
ARG
87
n
92
ARG
87
B
LEU
88
n
93
LEU
88
B
HIS
89
n
94
HIS
89
B
ALA
90
n
95
ALA
90
B
ARG
91
n
96
ARG
91
B
ILE
92
n
97
ILE
92
B
GLU
93
n
98
GLU
93
B
SER
94
n
99
SER
94
B
GLU
95
n
100
GLU
95
B
ASN
96
n
101
ASN
96
B
TYR
97
n
102
TYR
97
B
VAL
98
n
103
VAL
98
B
PRO
99
n
104
PRO
99
B
THR
100
n
105
THR
100
B
ALA
101
n
106
ALA
101
B
ALA
102
n
107
ALA
102
B
GLY
103
n
108
GLY
103
B
LEU
104
n
109
LEU
104
B
ALA
105
n
110
ALA
105
B
SER
106
n
111
SER
106
B
SER
107
n
112
SER
107
B
ALA
108
n
113
ALA
108
B
SER
109
n
114
SER
109
B
ALA
110
n
115
ALA
110
B
TYR
111
n
116
TYR
111
B
ALA
112
n
117
ALA
112
B
ALA
113
n
118
ALA
113
B
LEU
114
n
119
LEU
114
B
ALA
115
n
120
ALA
115
B
ALA
116
n
121
ALA
116
B
ALA
117
n
122
ALA
117
B
CYS
118
n
123
CYS
118
B
ASN
119
n
124
ASN
119
B
GLU
120
n
125
GLU
120
B
ALA
121
n
126
ALA
121
B
LEU
122
n
127
LEU
122
B
SER
123
n
128
SER
123
B
LEU
124
n
129
LEU
124
B
ASN
125
n
130
ASN
125
B
LEU
126
n
131
LEU
126
B
SER
127
n
132
SER
127
B
ASP
128
n
133
ASP
128
B
THR
129
n
134
THR
129
B
ASP
130
n
135
ASP
130
B
LEU
131
n
136
LEU
131
B
SER
132
n
137
SER
132
B
ARG
133
n
138
ARG
133
B
LEU
134
n
139
LEU
134
B
ALA
135
n
140
ALA
135
B
ARG
136
n
141
ARG
136
B
ARG
137
n
142
ARG
137
B
GLY
138
n
143
GLY
138
B
SER
139
n
144
SER
139
B
GLY
140
n
145
GLY
140
B
SER
141
n
146
SER
141
B
ALA
142
n
147
ALA
142
B
SER
143
n
148
SER
143
B
ARG
144
n
149
ARG
144
B
SER
145
n
150
SER
145
B
ILE
146
n
151
ILE
146
B
PHE
147
n
152
PHE
147
B
GLY
148
n
153
GLY
148
B
GLY
149
n
154
GLY
149
B
PHE
150
n
155
PHE
150
B
ALA
151
n
156
ALA
151
B
GLU
152
n
157
GLU
152
B
TRP
153
n
158
TRP
153
B
GLU
154
n
159
GLU
154
B
LYS
155
n
160
LYS
155
B
GLY
156
n
161
GLY
156
B
HIS
157
n
162
HIS
157
B
ASP
158
n
163
ASP
158
B
ASP
159
n
164
ASP
159
B
LEU
160
n
165
LEU
160
B
THR
161
n
166
THR
161
B
SER
162
n
167
SER
162
B
TYR
163
n
168
TYR
163
B
ALA
164
n
169
ALA
164
B
HIS
165
n
170
HIS
165
B
GLY
166
n
171
GLY
166
B
ILE
167
n
172
ILE
167
B
ASN
168
n
173
ASN
168
B
SER
169
n
174
SER
169
B
ASN
170
n
175
ASN
170
B
GLY
171
n
176
GLY
171
B
TRP
172
n
177
TRP
172
B
GLU
173
n
178
GLU
173
B
LYS
174
n
179
LYS
174
B
ASP
175
n
180
ASP
175
B
LEU
176
n
181
LEU
176
B
SER
177
n
182
SER
177
B
MET
178
n
183
MET
178
B
ILE
179
n
184
ILE
179
B
PHE
180
n
185
PHE
180
B
VAL
181
n
186
VAL
181
B
VAL
182
n
187
VAL
182
B
ILE
183
n
188
ILE
183
B
n
189
184
B
n
190
185
B
n
191
186
B
n
192
187
B
n
193
188
B
LYS
189
n
194
LYS
189
B
VAL
190
n
195
VAL
190
B
SER
191
n
196
SER
191
B
ALA
192
n
197
ALA
192
B
ARG
193
n
198
ARG
193
B
SER
194
n
199
SER
194
B
GLY
195
n
200
GLY
195
B
MET
196
n
201
MET
196
B
SER
197
n
202
SER
197
B
LEU
198
n
203
LEU
198
B
THR
199
n
204
THR
199
B
ARG
200
n
205
ARG
200
B
ASP
201
n
206
ASP
201
B
THR
202
n
207
THR
202
B
SER
203
n
208
SER
203
B
ARG
204
n
209
ARG
204
B
PHE
205
n
210
PHE
205
B
TYR
206
n
211
TYR
206
B
GLN
207
n
212
GLN
207
B
TYR
208
n
213
TYR
208
B
TRP
209
n
214
TRP
209
B
LEU
210
n
215
LEU
210
B
ASP
211
n
216
ASP
211
B
HIS
212
n
217
HIS
212
B
VAL
213
n
218
VAL
213
B
ASP
214
n
219
ASP
214
B
GLU
215
n
220
GLU
215
B
ASP
216
n
221
ASP
216
B
LEU
217
n
222
LEU
217
B
ASN
218
n
223
ASN
218
B
GLU
219
n
224
GLU
219
B
ALA
220
n
225
ALA
220
B
LYS
221
n
226
LYS
221
B
GLU
222
n
227
GLU
222
B
ALA
223
n
228
ALA
223
B
VAL
224
n
229
VAL
224
B
LYS
225
n
230
LYS
225
B
ASN
226
n
231
ASN
226
B
GLN
227
n
232
GLN
227
B
ASP
228
n
233
ASP
228
B
PHE
229
n
234
PHE
229
B
GLN
230
n
235
GLN
230
B
ARG
231
n
236
ARG
231
B
LEU
232
n
237
LEU
232
B
GLY
233
n
238
GLY
233
B
GLU
234
n
239
GLU
234
B
VAL
235
n
240
VAL
235
B
ILE
236
n
241
ILE
236
B
GLU
237
n
242
GLU
237
B
ALA
238
n
243
ALA
238
B
ASN
239
n
244
ASN
239
B
GLY
240
n
245
GLY
240
B
LEU
241
n
246
LEU
241
B
ARG
242
n
247
ARG
242
B
MET
243
n
248
MET
243
B
HIS
244
n
249
HIS
244
B
ALA
245
n
250
ALA
245
B
THR
246
n
251
THR
246
B
ASN
247
n
252
ASN
247
B
LEU
248
n
253
LEU
248
B
GLY
249
n
254
GLY
249
B
ALA
250
n
255
ALA
250
B
GLN
251
n
256
GLN
251
B
PRO
252
n
257
PRO
252
B
PRO
253
n
258
PRO
253
B
PHE
254
n
259
PHE
254
B
THR
255
n
260
THR
255
B
TYR
256
n
261
TYR
256
B
LEU
257
n
262
LEU
257
B
VAL
258
n
263
VAL
258
B
GLN
259
n
264
GLN
259
B
GLU
260
n
265
GLU
260
B
SER
261
n
266
SER
261
B
TYR
262
n
267
TYR
262
B
ASP
263
n
268
ASP
263
B
ALA
264
n
269
ALA
264
B
MET
265
n
270
MET
265
B
ALA
266
n
271
ALA
266
B
ILE
267
n
272
ILE
267
B
VAL
268
n
273
VAL
268
B
GLU
269
n
274
GLU
269
B
GLN
270
n
275
GLN
270
B
CYS
271
n
276
CYS
271
B
ARG
272
n
277
ARG
272
B
LYS
273
n
278
LYS
273
B
ALA
274
n
279
ALA
274
B
ASN
275
n
280
ASN
275
B
LEU
276
n
281
LEU
276
B
PRO
277
n
282
PRO
277
B
CYS
278
n
283
CYS
278
B
TYR
279
n
284
TYR
279
B
PHE
280
n
285
PHE
280
B
THR
281
n
286
THR
281
B
MET
282
n
287
MET
282
B
ASP
283
n
288
ASP
283
B
ALA
284
n
289
ALA
284
B
GLY
285
n
290
GLY
285
B
PRO
286
n
291
PRO
286
B
ASN
287
n
292
ASN
287
B
VAL
288
n
293
VAL
288
B
LYS
289
n
294
LYS
289
B
VAL
290
n
295
VAL
290
B
LEU
291
n
296
LEU
291
B
VAL
292
n
297
VAL
292
B
GLU
293
n
298
GLU
293
B
LYS
294
n
299
LYS
294
B
LYS
295
n
300
LYS
295
B
ASN
296
n
301
ASN
296
B
LYS
297
n
302
LYS
297
B
GLN
298
n
303
GLN
298
B
ALA
299
n
304
ALA
299
B
VAL
300
n
305
VAL
300
B
MET
301
n
306
MET
301
B
GLU
302
n
307
GLU
302
B
GLN
303
n
308
GLN
303
B
PHE
304
n
309
PHE
304
B
LEU
305
n
310
LEU
305
B
LYS
306
n
311
LYS
306
B
VAL
307
n
312
VAL
307
B
PHE
308
n
313
PHE
308
B
ASP
309
n
314
ASP
309
B
GLU
310
n
315
GLU
310
B
SER
311
n
316
SER
311
B
LYS
312
n
317
LYS
312
B
ILE
313
n
318
ILE
313
B
ILE
314
n
319
ILE
314
B
ALA
315
n
320
ALA
315
B
SER
316
n
321
SER
316
B
ASP
317
n
322
ASP
317
B
ILE
318
n
323
ILE
318
B
ILE
319
n
324
ILE
319
B
SER
320
n
325
SER
320
B
SER
321
n
326
SER
321
B
GLY
322
n
327
GLY
322
B
VAL
323
n
328
VAL
323
B
GLU
324
n
329
GLU
324
B
ILE
325
n
330
ILE
325
B
ILE
326
n
331
ILE
326
B
LYS
327
n
332
LYS
327
B
author_and_software_defined_assembly
PISA
2
dimeric
2220
-16
26470
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ASN
63
A
O
ASN
68
A
N
LEU
60
A
N
LEU
65
A
N
ILE
59
A
N
ILE
64
A
O
ILE
92
A
O
ILE
97
A
O
GLU
93
A
O
GLU
98
A
N
LYS
46
A
N
LYS
51
A
N
SER
35
A
N
SER
40
A
O
ALA
151
A
O
ALA
156
A
N
PHE
150
A
N
PHE
155
A
O
ILE
167
A
O
ILE
172
A
O
ASN
63
A
O
ASN
68
A
N
LEU
60
A
N
LEU
65
A
N
ILE
59
A
N
ILE
64
A
O
ILE
92
A
O
ILE
97
A
O
GLU
93
A
O
GLU
98
A
N
LYS
46
A
N
LYS
51
A
O
LEU
34
A
O
LEU
39
A
N
LEU
15
A
N
LEU
20
A
N
ARG
8
A
N
ARG
13
A
O
GLU
324
A
O
GLU
329
A
N
ALA
22
A
N
ALA
27
A
O
ILE
28
A
O
ILE
33
A
N
TYR
279
A
N
TYR
284
A
O
LEU
291
A
O
LEU
296
A
O
VAL
290
A
O
VAL
295
A
N
ILE
179
A
N
ILE
184
A
N
PHE
180
A
N
PHE
185
A
O
ILE
314
A
O
ILE
319
B
O
ASN
63
B
O
ASN
68
B
N
LEU
60
B
N
LEU
65
B
N
CYS
57
B
N
CYS
62
B
O
ILE
92
B
O
ILE
97
B
O
TYR
97
B
O
TYR
102
B
N
TYR
42
B
N
TYR
47
B
N
SER
35
B
N
SER
40
B
O
ALA
151
B
O
ALA
156
B
N
PHE
150
B
N
PHE
155
B
O
ILE
167
B
O
ILE
172
B
O
ASN
63
B
O
ASN
68
B
N
LEU
60
B
N
LEU
65
B
N
CYS
57
B
N
CYS
62
B
O
ILE
92
B
O
ILE
97
B
O
TYR
97
B
O
TYR
102
B
N
TYR
42
B
N
TYR
47
B
O
PHE
49
B
O
PHE
54
B
N
LYS
3
B
N
LYS
8
B
N
ARG
8
B
N
ARG
13
B
O
GLU
324
B
O
GLU
329
B
N
ASP
23
B
N
ASP
28
B
O
ILE
28
B
O
ILE
33
B
N
TYR
279
B
N
TYR
284
B
O
LEU
291
B
O
LEU
296
B
O
VAL
290
B
O
VAL
295
B
N
ILE
179
B
N
ILE
184
B
N
PHE
180
B
N
PHE
185
B
O
ILE
314
B
O
ILE
319
1
A
ASN
184
A
ASN
189
1
Y
1
A
ASN
185
A
ASN
190
1
Y
1
A
GLN
186
A
GLN
191
1
Y
1
A
SER
187
A
SER
192
1
Y
1
B
GLY
-4
B
GLY
1
1
Y
1
B
SER
-3
B
SER
2
1
Y
1
B
THR
-2
B
THR
3
1
Y
1
B
GLY
-1
B
GLY
4
1
Y
1
B
SER
0
B
SER
5
1
Y
1
B
MET
1
B
MET
6
1
Y
1
B
ASN
184
B
ASN
189
1
Y
1
B
ASN
185
B
ASN
190
1
Y
1
B
GLN
186
B
GLN
191
1
Y
1
B
SER
187
B
SER
192
1
Y
1
B
LYS
188
B
LYS
193
1
Y
1
A
TRP
19
-160.73
102.01
1
A
TYR
97
-100.01
59.83
1
A
PRO
99
-65.40
71.08
1
A
ASP
283
-108.40
-136.53
1
B
TRP
19
-162.46
98.26
1
B
HIS
157
-140.29
-11.02
1
B
ASP
283
-112.60
-135.04
-2.8840
0.0000
0.0000
6.5508
0.0000
-1.6228
0.2407
0.1903
0.1928
0.1928
2.100
29.004
1665
33267
5.00
86.84
0.30
RANDOM
1
0.00
MOLECULAR REPLACEMENT
23.93
0.83
1.10
PDB ENTRY 3QT5
ML
FLAT BULK SOLVENT MODEL
27.225
0.338
2.100
29.004
278
5387
44
0
5065
0.008
5192
1.087
7014
14.840
1940
0.067
776
0.004
906
0.3337
0.2724
2.1750
156
2885
80.00
0.2946
0.2383
2.2620
160
3006
84.00
0.2810
0.2364
2.3649
162
3033
84.00
0.3235
0.2210
2.4895
163
3102
86.00
0.2469
0.2155
2.6454
159
3115
86.00
0.3008
0.2141
2.8495
167
3133
86.00
0.2427
0.2092
3.1359
161
3109
86.00
0.2372
0.1931
3.5890
168
3173
87.00
0.2171
0.1507
4.5190
169
3256
89.00
0.1828
0.1578
29.0066
200
3790
99.00
2.100
49.376
3QT8
34009
34008
0.00
2.00
0.079
1
19.5
6.2
86.84
0.532
2.10
2.18
2.9
3314
1
5.8
87.5
data collection
HKL-2000
phasing
PHASER
refinement
PHENIX
(phenix.refine: 1.6.4_486)
data reduction
HKL-2000
data scaling
HKL-2000
Crystal structure of mutant S192A Staphylococcus epidermidis mevalonate diphosphate decarboxylase complexed with inhibitor 6-FMVAPP
1
N
N
1
N
N
2
N
N
3
N
N
2
N
N
4
N
N
4
N
N
A
ASN
66
A
ASN
71
HELX_P
A
GLY
85
A
GLY
90
1
1
20
A
SER
106
A
SER
111
HELX_P
A
SER
123
A
SER
128
1
2
18
A
SER
127
A
SER
132
HELX_P
A
SER
139
A
SER
144
1
3
13
A
GLY
140
A
GLY
145
HELX_P
A
PHE
147
A
PHE
152
5
4
8
A
GLY
171
A
GLY
176
HELX_P
A
LYS
174
A
LYS
179
5
5
4
A
SER
191
A
SER
196
HELX_P
A
SER
203
A
SER
208
1
6
13
A
PHE
205
A
PHE
210
HELX_P
A
GLN
227
A
GLN
232
1
7
23
A
ASP
228
A
ASP
233
HELX_P
A
GLY
249
A
GLY
254
1
8
22
A
VAL
258
A
VAL
263
HELX_P
A
ALA
274
A
ALA
279
1
9
17
A
ASN
296
A
ASN
301
HELX_P
A
LYS
306
A
LYS
311
1
10
11
A
ASP
309
A
ASP
314
HELX_P
A
SER
311
A
SER
316
5
11
3
B
ASN
66
B
ASN
71
HELX_P
B
GLY
85
B
GLY
90
1
12
20
B
SER
106
B
SER
111
HELX_P
B
LEU
122
B
LEU
127
1
13
17
B
SER
127
B
SER
132
HELX_P
B
ARG
137
B
ARG
142
1
14
11
B
SER
139
B
SER
144
HELX_P
B
PHE
147
B
PHE
152
5
15
9
B
GLY
171
B
GLY
176
HELX_P
B
LYS
174
B
LYS
179
5
16
4
B
SER
191
B
SER
196
HELX_P
B
SER
203
B
SER
208
1
17
13
B
PHE
205
B
PHE
210
HELX_P
B
GLN
227
B
GLN
232
1
18
23
B
ASP
228
B
ASP
233
HELX_P
B
GLY
249
B
GLY
254
1
19
22
B
VAL
258
B
VAL
263
HELX_P
B
ALA
274
B
ALA
279
1
20
17
B
LYS
294
B
LYS
299
HELX_P
B
LYS
306
B
LYS
311
1
21
13
B
ASP
309
B
ASP
314
HELX_P
B
SER
311
B
SER
316
5
22
3
LYASE/LYASE INHIBITOR
GHMP kinase family, LYASE-LYASE INHIBITOR complex
A
GLN
251
A
GLN
256
1
A
PRO
252
A
PRO
257
1.21
B
GLN
251
B
GLN
256
1
B
PRO
252
B
PRO
257
-0.15
Q9FD73_STAEP
UNP
1
1
Q9FD73
MVKSGKARAHTNIALIKYWGKADETYIIPMNNSLSVTLDRFYTETKVTFDPDFTEDCLILNGNEVNAKEKEKIQNYMNIV
RDLAGNRLHARIESENYVPTAAGLASSASAYAALAAACNEALSLNLSDTDLSRLARRGSGSASRSIFGGFAEWEKGHDDL
TSYAHGINSNGWEKDLSMIFVVINNQSKKVSSRSGMSLTRDTSRFYQYWLDHVDEDLNEAKEAVKNQDFQRLGEVIEANG
LRMHATNLGAQPPFTYLVQESYDAMAIVEQCRKANLPCYFTMDAGPNVKVLVEKKNKQAVMEQFLKVFDESKIIASDIIS
SGVEIIK
1
327
3QT8
1
327
Q9FD73
A
1
6
332
1
327
3QT8
1
327
Q9FD73
B
1
6
332
1
expression tag
GLY
-4
3QT8
A
Q9FD73
UNP
1
1
expression tag
SER
-3
3QT8
A
Q9FD73
UNP
2
1
expression tag
THR
-2
3QT8
A
Q9FD73
UNP
3
1
expression tag
GLY
-1
3QT8
A
Q9FD73
UNP
4
1
expression tag
SER
0
3QT8
A
Q9FD73
UNP
5
1
SER
engineered mutation
ALA
192
3QT8
A
Q9FD73
UNP
192
197
2
expression tag
GLY
-4
3QT8
B
Q9FD73
UNP
1
2
expression tag
SER
-3
3QT8
B
Q9FD73
UNP
2
2
expression tag
THR
-2
3QT8
B
Q9FD73
UNP
3
2
expression tag
GLY
-1
3QT8
B
Q9FD73
UNP
4
2
expression tag
SER
0
3QT8
B
Q9FD73
UNP
5
2
SER
engineered mutation
ALA
192
3QT8
B
Q9FD73
UNP
192
197
6
6
2
4
6
6
2
4
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ASN
63
A
ASN
68
A
GLU
64
A
GLU
69
A
CYS
57
A
CYS
62
A
LEU
60
A
LEU
65
A
HIS
89
A
HIS
94
A
TYR
97
A
TYR
102
A
SER
33
A
SER
38
A
ASP
50
A
ASP
55
A
PHE
150
A
PHE
155
A
GLU
154
A
GLU
159
A
TYR
163
A
TYR
168
A
ILE
167
A
ILE
172
A
ASN
63
A
ASN
68
A
GLU
64
A
GLU
69
A
CYS
57
A
CYS
62
A
LEU
60
A
LEU
65
A
HIS
89
A
HIS
94
A
TYR
97
A
TYR
102
A
SER
33
A
SER
38
A
ASP
50
A
ASP
55
A
LYS
3
A
LYS
8
A
ILE
16
A
ILE
21
A
GLU
324
A
GLU
329
A
ILE
325
A
ILE
330
A
LYS
21
A
LYS
26
A
ASP
23
A
ASP
28
A
ILE
28
A
ILE
33
A
PRO
29
A
PRO
34
A
CYS
278
A
CYS
283
A
THR
281
A
THR
286
A
VAL
288
A
VAL
293
A
GLU
293
A
GLU
298
A
LEU
176
A
LEU
181
A
VAL
181
A
VAL
186
A
ILE
313
A
ILE
318
A
ASP
317
A
ASP
322
B
ASN
63
B
ASN
68
B
GLU
64
B
GLU
69
B
CYS
57
B
CYS
62
B
LEU
60
B
LEU
65
B
ALA
90
B
ALA
95
B
TYR
97
B
TYR
102
B
SER
33
B
SER
38
B
PHE
49
B
PHE
54
B
PHE
150
B
PHE
155
B
GLU
154
B
GLU
159
B
TYR
163
B
TYR
168
B
ILE
167
B
ILE
172
B
ASN
63
B
ASN
68
B
GLU
64
B
GLU
69
B
CYS
57
B
CYS
62
B
LEU
60
B
LEU
65
B
ALA
90
B
ALA
95
B
TYR
97
B
TYR
102
B
SER
33
B
SER
38
B
PHE
49
B
PHE
54
B
LYS
3
B
LYS
8
B
ILE
16
B
ILE
21
B
GLU
324
B
GLU
329
B
ILE
325
B
ILE
330
B
LYS
21
B
LYS
26
B
ASP
23
B
ASP
28
B
ILE
28
B
ILE
33
B
PRO
29
B
PRO
34
B
CYS
278
B
CYS
283
B
THR
281
B
THR
286
B
VAL
288
B
VAL
293
B
GLU
293
B
GLU
298
B
LEU
176
B
LEU
181
B
VAL
181
B
VAL
186
B
ILE
313
B
ILE
318
B
ASP
317
B
ASP
322
BINDING SITE FOR RESIDUE FM0 A 328
A
FM0
328
Software
16
BINDING SITE FOR RESIDUE FM0 B 328
B
FM0
328
Software
13
BINDING SITE FOR RESIDUE GOL A 3968
A
GOL
3968
Software
5
A
ALA
14
A
ALA
19
16
1_555
A
TYR
18
A
TYR
23
16
1_555
A
TRP
19
A
TRP
24
16
1_555
A
LYS
21
A
LYS
26
16
1_555
A
ILE
27
A
ILE
32
16
1_555
A
SER
139
A
SER
144
16
1_555
A
GLY
140
A
GLY
145
16
1_555
A
SER
141
A
SER
146
16
1_555
A
ARG
144
A
ARG
149
16
1_555
A
ARG
193
A
ARG
198
16
1_555
A
MET
196
A
MET
201
16
1_555
A
ASP
283
A
ASP
288
16
1_555
A
ALA
284
A
ALA
289
16
1_555
A
HOH
362
F
HOH
16
1_555
A
HOH
368
F
HOH
16
1_555
A
HOH
478
F
HOH
16
1_555
B
ALA
14
B
ALA
19
13
1_555
B
TYR
18
B
TYR
23
13
1_555
B
TRP
19
B
TRP
24
13
1_555
B
LYS
21
B
LYS
26
13
1_555
B
SER
107
B
SER
112
13
1_555
B
SER
139
B
SER
144
13
1_555
B
GLY
140
B
GLY
145
13
1_555
B
SER
141
B
SER
146
13
1_555
B
ARG
144
B
ARG
149
13
1_555
B
ARG
193
B
ARG
198
13
1_555
B
ASP
283
B
ASP
288
13
1_555
B
ALA
284
B
ALA
289
13
1_555
B
HOH
450
G
HOH
13
1_555
A
ILE
79
A
ILE
84
5
1_555
A
ASP
82
A
ASP
87
5
1_555
A
LEU
83
A
LEU
88
5
1_555
A
HOH
355
F
HOH
5
1_555
A
HOH
482
F
HOH
5
1_555
20
C 2 2 21