0.017263 0.000000 0.000000 0.000000 0.017263 0.000000 0.000000 0.000000 0.011295 0.00000 0.00000 0.00000 Colliandre, L. Gelin, M. Labesse, G. Guichou, J.-F. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 57.927 57.927 88.537 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 R C N 309 N O N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N N Y 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C N 359 N O N 360 N O N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 N C N 377 N C N 378 N C N 379 N O N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing DK Acta Crystallogr.,Sect.D ABCRE6 0766 0907-4449 67 747 755 10.1107/S0907444911023249 21904027 In-plate protein crystallization, in situ ligand soaking and X-ray diffraction. 2011 10.2210/pdb3qyu/pdb pdb_00003qyu 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 298.0 1 298.0 1 CCD 2010-07-25 ADSC QUANTUM 315r YALE MIRRORS SINGLE WAVELENGTH M x-ray 1 YALE MIRRORS SINGLE WAVELENGTH M x-ray 1 0.97964 1.0 BM30A ESRF 0.97964 SYNCHROTRON ESRF BEAMLINE BM30A 17652.125 Peptidyl-prolyl cis-trans isomerase F 5.2.1.8 catalytic domain K175I 1 man polymer 18.015 water 120 nat water PPIase F, Cyclophilin F, Rotamase F no no GNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGS RFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGSKSGRTSKKIVITDC GQLS GNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGS RFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGSKSGRTSKKIVITDC GQLS A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample PPIF, CYP3 9606 Homo sapiens 562 Escherichia coli 2 2.10 41.53 VAPOR DIFFUSION, SITTING DROP 7.3 30% Peg 4000, pH 7.3, VAPOR DIFFUSION, SITTING DROP, temperature 291K 291 software chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_ref_seq_dif repository Initial release Database references Refinement description Data collection Database references Refinement description 1 0 2011-08-24 1 1 2012-03-21 1 2 2017-11-08 1 3 2023-09-13 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details RCSB Y RCSB 2011-03-04 REL REL HOH water 2Z6W PDB entry 2Z6W PDB experimental model HOH 1 2 HOH HOH 1 A HOH 2 2 HOH HOH 2 A HOH 3 2 HOH HOH 3 A HOH 5 2 HOH HOH 5 A HOH 6 2 HOH HOH 6 A HOH 7 2 HOH HOH 7 A HOH 8 2 HOH HOH 8 A HOH 9 2 HOH HOH 9 A HOH 10 2 HOH HOH 10 A HOH 11 2 HOH HOH 11 A HOH 12 2 HOH HOH 12 A HOH 13 2 HOH HOH 13 A HOH 14 2 HOH HOH 14 A HOH 15 2 HOH HOH 15 A HOH 16 2 HOH HOH 16 A HOH 17 2 HOH HOH 17 A HOH 18 2 HOH HOH 18 A HOH 19 2 HOH HOH 19 A HOH 20 2 HOH HOH 20 A HOH 21 2 HOH HOH 21 A HOH 22 2 HOH HOH 22 A HOH 23 2 HOH HOH 23 A HOH 24 2 HOH HOH 24 A HOH 25 2 HOH HOH 25 A HOH 26 2 HOH HOH 26 A HOH 27 2 HOH HOH 27 A HOH 28 2 HOH HOH 28 A HOH 29 2 HOH HOH 29 A HOH 30 2 HOH HOH 30 A HOH 31 2 HOH HOH 31 A HOH 32 2 HOH HOH 32 A HOH 33 2 HOH HOH 33 A HOH 34 2 HOH HOH 34 A HOH 35 2 HOH HOH 35 A HOH 36 2 HOH HOH 36 A HOH 37 2 HOH HOH 37 A HOH 38 2 HOH HOH 38 A HOH 39 2 HOH HOH 39 A HOH 40 2 HOH HOH 40 A HOH 41 2 HOH HOH 41 A HOH 42 2 HOH HOH 42 A HOH 43 2 HOH HOH 43 A HOH 44 2 HOH HOH 208 A HOH 45 2 HOH HOH 209 A HOH 46 2 HOH HOH 210 A HOH 47 2 HOH HOH 211 A HOH 49 2 HOH HOH 212 A HOH 50 2 HOH HOH 213 A HOH 52 2 HOH HOH 214 A HOH 53 2 HOH HOH 215 A HOH 54 2 HOH HOH 216 A HOH 55 2 HOH HOH 217 A HOH 56 2 HOH HOH 218 A HOH 57 2 HOH HOH 219 A HOH 58 2 HOH HOH 220 A HOH 61 2 HOH HOH 221 A HOH 62 2 HOH HOH 222 A HOH 64 2 HOH HOH 223 A HOH 65 2 HOH HOH 224 A HOH 66 2 HOH HOH 225 A HOH 67 2 HOH HOH 226 A HOH 68 2 HOH HOH 227 A HOH 69 2 HOH HOH 228 A HOH 70 2 HOH HOH 229 A HOH 71 2 HOH HOH 230 A HOH 72 2 HOH HOH 231 A HOH 73 2 HOH HOH 232 A HOH 75 2 HOH HOH 233 A HOH 76 2 HOH HOH 234 A HOH 78 2 HOH HOH 235 A HOH 79 2 HOH HOH 236 A HOH 81 2 HOH HOH 237 A HOH 82 2 HOH HOH 238 A HOH 83 2 HOH HOH 239 A HOH 85 2 HOH HOH 240 A HOH 86 2 HOH HOH 241 A HOH 87 2 HOH HOH 242 A HOH 88 2 HOH HOH 243 A HOH 90 2 HOH HOH 244 A HOH 91 2 HOH HOH 245 A HOH 92 2 HOH HOH 246 A HOH 94 2 HOH HOH 247 A HOH 95 2 HOH HOH 248 A HOH 96 2 HOH HOH 249 A HOH 97 2 HOH HOH 250 A HOH 98 2 HOH HOH 251 A HOH 99 2 HOH HOH 252 A HOH 100 2 HOH HOH 253 A HOH 102 2 HOH HOH 254 A HOH 106 2 HOH HOH 255 A HOH 107 2 HOH HOH 256 A HOH 110 2 HOH HOH 257 A HOH 111 2 HOH HOH 258 A HOH 112 2 HOH HOH 259 A HOH 113 2 HOH HOH 260 A HOH 114 2 HOH HOH 261 A HOH 116 2 HOH HOH 262 A HOH 119 2 HOH HOH 263 A HOH 120 2 HOH HOH 264 A HOH 122 2 HOH HOH 265 A HOH 123 2 HOH HOH 266 A HOH 124 2 HOH HOH 267 A HOH 125 2 HOH HOH 268 A HOH 126 2 HOH HOH 269 A HOH 128 2 HOH HOH 270 A HOH 130 2 HOH HOH 271 A HOH 131 2 HOH HOH 272 A HOH 132 2 HOH HOH 273 A HOH 134 2 HOH HOH 274 A HOH 136 2 HOH HOH 275 A HOH 137 2 HOH HOH 276 A HOH 138 2 HOH HOH 277 A HOH 139 2 HOH HOH 278 A HOH 140 2 HOH HOH 279 A HOH 141 2 HOH HOH 280 A HOH 142 2 HOH HOH 281 A HOH 143 2 HOH HOH 282 A HOH 144 2 HOH HOH 283 A HOH 146 2 HOH HOH 284 A HOH 147 2 HOH HOH 285 A GLY 44 n 1 GLY 44 A ASN 45 n 2 ASN 45 A PRO 46 n 3 PRO 46 A LEU 47 n 4 LEU 47 A VAL 48 n 5 VAL 48 A TYR 49 n 6 TYR 49 A LEU 50 n 7 LEU 50 A ASP 51 n 8 ASP 51 A VAL 52 n 9 VAL 52 A ASP 53 n 10 ASP 53 A ALA 54 n 11 ALA 54 A ASN 55 n 12 ASN 55 A GLY 56 n 13 GLY 56 A LYS 57 n 14 LYS 57 A PRO 58 n 15 PRO 58 A LEU 59 n 16 LEU 59 A GLY 60 n 17 GLY 60 A ARG 61 n 18 ARG 61 A VAL 62 n 19 VAL 62 A VAL 63 n 20 VAL 63 A LEU 64 n 21 LEU 64 A GLU 65 n 22 GLU 65 A LEU 66 n 23 LEU 66 A LYS 67 n 24 LYS 67 A ALA 68 n 25 ALA 68 A ASP 69 n 26 ASP 69 A VAL 70 n 27 VAL 70 A VAL 71 n 28 VAL 71 A PRO 72 n 29 PRO 72 A LYS 73 n 30 LYS 73 A THR 74 n 31 THR 74 A ALA 75 n 32 ALA 75 A GLU 76 n 33 GLU 76 A ASN 77 n 34 ASN 77 A PHE 78 n 35 PHE 78 A ARG 79 n 36 ARG 79 A ALA 80 n 37 ALA 80 A LEU 81 n 38 LEU 81 A CYS 82 n 39 CYS 82 A THR 83 n 40 THR 83 A GLY 84 n 41 GLY 84 A GLU 85 n 42 GLU 85 A LYS 86 n 43 LYS 86 A GLY 87 n 44 GLY 87 A PHE 88 n 45 PHE 88 A GLY 89 n 46 GLY 89 A TYR 90 n 47 TYR 90 A LYS 91 n 48 LYS 91 A GLY 92 n 49 GLY 92 A SER 93 n 50 SER 93 A THR 94 n 51 THR 94 A PHE 95 n 52 PHE 95 A HIS 96 n 53 HIS 96 A ARG 97 n 54 ARG 97 A VAL 98 n 55 VAL 98 A ILE 99 n 56 ILE 99 A PRO 100 n 57 PRO 100 A SER 101 n 58 SER 101 A PHE 102 n 59 PHE 102 A MET 103 n 60 MET 103 A CYS 104 n 61 CYS 104 A GLN 105 n 62 GLN 105 A ALA 106 n 63 ALA 106 A GLY 107 n 64 GLY 107 A ASP 108 n 65 ASP 108 A PHE 109 n 66 PHE 109 A THR 110 n 67 THR 110 A ASN 111 n 68 ASN 111 A HIS 112 n 69 HIS 112 A ASN 113 n 70 ASN 113 A GLY 114 n 71 GLY 114 A THR 115 n 72 THR 115 A GLY 116 n 73 GLY 116 A GLY 117 n 74 GLY 117 A LYS 118 n 75 LYS 118 A SER 119 n 76 SER 119 A ILE 120 n 77 ILE 120 A TYR 121 n 78 TYR 121 A GLY 122 n 79 GLY 122 A SER 123 n 80 SER 123 A ARG 124 n 81 ARG 124 A PHE 125 n 82 PHE 125 A PRO 126 n 83 PRO 126 A ASP 127 n 84 ASP 127 A GLU 128 n 85 GLU 128 A ASN 129 n 86 ASN 129 A PHE 130 n 87 PHE 130 A THR 131 n 88 THR 131 A LEU 132 n 89 LEU 132 A LYS 133 n 90 LYS 133 A HIS 134 n 91 HIS 134 A VAL 135 n 92 VAL 135 A GLY 136 n 93 GLY 136 A PRO 137 n 94 PRO 137 A GLY 138 n 95 GLY 138 A VAL 139 n 96 VAL 139 A LEU 140 n 97 LEU 140 A SER 141 n 98 SER 141 A MET 142 n 99 MET 142 A ALA 143 n 100 ALA 143 A ASN 144 n 101 ASN 144 A ALA 145 n 102 ALA 145 A GLY 146 n 103 GLY 146 A PRO 147 n 104 PRO 147 A ASN 148 n 105 ASN 148 A THR 149 n 106 THR 149 A ASN 150 n 107 ASN 150 A GLY 151 n 108 GLY 151 A SER 152 n 109 SER 152 A GLN 153 n 110 GLN 153 A PHE 154 n 111 PHE 154 A PHE 155 n 112 PHE 155 A ILE 156 n 113 ILE 156 A CYS 157 n 114 CYS 157 A THR 158 n 115 THR 158 A ILE 159 n 116 ILE 159 A LYS 160 n 117 LYS 160 A THR 161 n 118 THR 161 A ASP 162 n 119 ASP 162 A TRP 163 n 120 TRP 163 A LEU 164 n 121 LEU 164 A ASP 165 n 122 ASP 165 A GLY 166 n 123 GLY 166 A LYS 167 n 124 LYS 167 A HIS 168 n 125 HIS 168 A VAL 169 n 126 VAL 169 A VAL 170 n 127 VAL 170 A PHE 171 n 128 PHE 171 A GLY 172 n 129 GLY 172 A HIS 173 n 130 HIS 173 A VAL 174 n 131 VAL 174 A ILE 175 n 132 ILE 175 A GLU 176 n 133 GLU 176 A GLY 177 n 134 GLY 177 A MET 178 n 135 MET 178 A ASP 179 n 136 ASP 179 A VAL 180 n 137 VAL 180 A VAL 181 n 138 VAL 181 A LYS 182 n 139 LYS 182 A LYS 183 n 140 LYS 183 A ILE 184 n 141 ILE 184 A GLU 185 n 142 GLU 185 A SER 186 n 143 SER 186 A PHE 187 n 144 PHE 187 A GLY 188 n 145 GLY 188 A SER 189 n 146 SER 189 A LYS 190 n 147 LYS 190 A SER 191 n 148 SER 191 A GLY 192 n 149 GLY 192 A ARG 193 n 150 ARG 193 A THR 194 n 151 THR 194 A SER 195 n 152 SER 195 A LYS 196 n 153 LYS 196 A LYS 197 n 154 LYS 197 A ILE 198 n 155 ILE 198 A VAL 199 n 156 VAL 199 A ILE 200 n 157 ILE 200 A THR 201 n 158 THR 201 A ASP 202 n 159 ASP 202 A CYS 203 n 160 CYS 203 A GLY 204 n 161 GLY 204 A GLN 205 n 162 GLN 205 A LEU 206 n 163 LEU 206 A SER 207 n 164 SER 207 A author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ARG 97 A N ARG 54 A O GLN 105 A O GLN 62 A N ALA 106 A N ALA 63 A O PHE 154 A O PHE 111 A O PHE 155 A O PHE 112 A N SER 141 A N SER 98 A N LEU 140 A N LEU 97 A O PHE 171 A O PHE 128 A O ILE 175 A O ILE 132 A N VAL 63 A N VAL 20 A O LEU 59 A O LEU 16 A N VAL 52 A N VAL 9 A N ASP 51 A N ASP 8 A O ASP 202 A O ASP 159 1 A CG LYS 57 A CG LYS 14 1 Y 1 A CD LYS 57 A CD LYS 14 1 Y 1 A CE LYS 57 A CE LYS 14 1 Y 1 A NZ LYS 57 A NZ LYS 14 1 Y 1 A CG ARG 193 A CG ARG 150 1 Y 1 A CD ARG 193 A CD ARG 150 1 Y 1 A NE ARG 193 A NE ARG 150 1 Y 1 A CZ ARG 193 A CZ ARG 150 1 Y 1 A NH1 ARG 193 A NH1 ARG 150 1 Y 1 A NH2 ARG 193 A NH2 ARG 150 1 Y 1 A PHE 102 -144.24 -73.91 1 A THR 161 -112.82 64.91 13.386 0.04 0.00 0.00 0.04 0.00 -0.08 0.974 0.966 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.1894 0.1476 0.151 0.14974 1.54 27.53 982 19640 18518 5.0 86.2 3.184 0.050 RANDOM 1,2 THROUGHOUT 2.0 isomorphous 0.086 0.80 0.80 1.20 PDB entry 2Z6W MAXIMUM LIKELIHOOD MASK 1.54 27.53 120 1350 0 0 1230 0.010 0.022 1294 0.001 0.020 887 1.23 1.948 1744 0.883 3.000 2180 5.790 5.000 163 29.860 24.364 55 12.807 15.000 226 15.770 15.000 5 0.079 0.200 191 0.005 0.021 1440 0.001 0.020 260 0.921 1.500 810 0.245 1.500 342 1.501 2.000 1310 2.185 3.000 484 3.209 4.500 434 0.837 3.000 2181 1.62 1196 20 1.54 28.976 3QYU 19640 18518 0.0 0.0 1,2 3.6 86.2 0.299 1.54 1.62 2.2 1,2 2.5 82.1 data collection DNA refinement REFMAC 5.5.0109 data reduction MOSFLM data scaling SCALA Crystal structure of human cyclophilin D at 1.54 A resolution at room temperature 1 N N 2 N N A VAL 71 A VAL 28 HELX_P A GLY 84 A GLY 41 1 1 14 A THR 161 A THR 118 HELX_P A ASP 165 A ASP 122 5 2 5 A GLY 177 A GLY 134 HELX_P A PHE 187 A PHE 144 1 3 11 ISOMERASE beta barrel, prolyl cis/trans isomerase, mitochondria, ISOMERASE PPIF_HUMAN UNP 1 44 P30405 GNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGS RFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDC GQLS 44 207 3QYU 44 207 P30405 A 1 1 164 1 LYS engineered mutation ILE 175 3QYU A P30405 UNP 175 132 8 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A PHE 95 A PHE 52 A ILE 99 A ILE 56 A MET 103 A MET 60 A ALA 106 A ALA 63 A PHE 154 A PHE 111 A CYS 157 A CYS 114 A VAL 139 A VAL 96 A MET 142 A MET 99 A VAL 170 A VAL 127 A GLU 176 A GLU 133 A LYS 57 A LYS 14 A LEU 66 A LEU 23 A LEU 47 A LEU 4 A ALA 54 A ALA 11 A ILE 198 A ILE 155 A GLN 205 A GLN 162 92 P 41 21 2