0.013329
0.007695
0.000000
0.000000
0.015391
0.000000
0.000000
0.000000
0.011754
0.00000
0.00000
0.00000
Qureshi, B.
Hoehne, W.
Scheerer, P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
18
90.00
90.00
120.00
75.025
75.025
85.081
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
US
Faseb J.
FAJOEC
2074
0892-6638
27
1034
1047
10.1096/fj.11-180992
23233536
Dynein light chain 8a of Toxoplasma gondii, a unique conoid-localized beta-strand-swapped homodimer, is required for an efficient parasite growth.
2013
10.2210/pdb3rjs/pdb
pdb_00003rjs
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
MIRRORS
CCD
2007-05-23
MAR CCD 165 mm
SI-111 CRYSTAL - DOUBLE CRYSTAL MONOCHROMATOR
SINGLE WAVELENGTH
M
x-ray
1
0.9184
1.0
14.2
BESSY
0.9184
SYNCHROTRON
BESSY BEAMLINE 14.2
10317.735
Dynein light chain motor protein
1
man
polymer
18.015
water
113
nat
water
no
no
MADRKAVIKNADMPEDLQQDAIDCANQALEKYNIEKDIAAFIKKEFDRKHNPTWHCVVGRNFGSYVTHETHHFIYFYIGQ
VAVLLFKSG
MADRKAVIKNADMPEDLQQDAIDCANQALEKYNIEKDIAAFIKKEFDRKHNPTWHCVVGRNFGSYVTHETHHFIYFYIGQ
VAVLLFKSG
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
5811
Toxoplasma gondii
469008
Escherichia coli
BL21(DE3)
Plasmid
pET28b+
1
2.23
44.87
4.6
16% polyethylene glycol 4000, 0.2 M (NH4)2SO4,
0.1 M CH3COONa, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 295K
295
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Database references
Data collection
Refinement description
Data collection
Database references
Refinement description
1
0
2012-12-12
1
1
2013-05-15
1
2
2019-07-17
1
3
2023-09-13
_software.name
_software.version
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
RCSB
Y
RCSB
2011-04-15
REL
REL
HOH
water
1CMI
PDB ENTRY 1CMI
PDB
experimental model
HOH
1
2
HOH
HOH
101
A
HOH
2
2
HOH
HOH
102
A
HOH
3
2
HOH
HOH
103
A
HOH
4
2
HOH
HOH
104
A
HOH
5
2
HOH
HOH
105
A
HOH
6
2
HOH
HOH
106
A
HOH
7
2
HOH
HOH
107
A
HOH
8
2
HOH
HOH
108
A
HOH
9
2
HOH
HOH
109
A
HOH
10
2
HOH
HOH
110
A
HOH
11
2
HOH
HOH
111
A
HOH
12
2
HOH
HOH
112
A
HOH
13
2
HOH
HOH
113
A
HOH
14
2
HOH
HOH
114
A
HOH
15
2
HOH
HOH
115
A
HOH
16
2
HOH
HOH
116
A
HOH
17
2
HOH
HOH
117
A
HOH
18
2
HOH
HOH
118
A
HOH
19
2
HOH
HOH
119
A
HOH
20
2
HOH
HOH
120
A
HOH
21
2
HOH
HOH
121
A
HOH
22
2
HOH
HOH
122
A
HOH
23
2
HOH
HOH
123
A
HOH
24
2
HOH
HOH
124
A
HOH
25
2
HOH
HOH
125
A
HOH
26
2
HOH
HOH
126
A
HOH
27
2
HOH
HOH
127
A
HOH
28
2
HOH
HOH
128
A
HOH
29
2
HOH
HOH
129
A
HOH
30
2
HOH
HOH
130
A
HOH
31
2
HOH
HOH
131
A
HOH
32
2
HOH
HOH
132
A
HOH
33
2
HOH
HOH
133
A
HOH
34
2
HOH
HOH
134
A
HOH
35
2
HOH
HOH
135
A
HOH
36
2
HOH
HOH
136
A
HOH
37
2
HOH
HOH
137
A
HOH
38
2
HOH
HOH
138
A
HOH
39
2
HOH
HOH
139
A
HOH
40
2
HOH
HOH
140
A
HOH
41
2
HOH
HOH
141
A
HOH
42
2
HOH
HOH
142
A
HOH
43
2
HOH
HOH
143
A
HOH
44
2
HOH
HOH
144
A
HOH
45
2
HOH
HOH
145
A
HOH
46
2
HOH
HOH
146
A
HOH
47
2
HOH
HOH
147
A
HOH
48
2
HOH
HOH
148
A
HOH
49
2
HOH
HOH
149
A
HOH
50
2
HOH
HOH
150
A
HOH
51
2
HOH
HOH
151
A
HOH
52
2
HOH
HOH
152
A
HOH
53
2
HOH
HOH
153
A
HOH
54
2
HOH
HOH
154
A
HOH
55
2
HOH
HOH
155
A
HOH
56
2
HOH
HOH
156
A
HOH
57
2
HOH
HOH
157
A
HOH
58
2
HOH
HOH
158
A
HOH
59
2
HOH
HOH
159
A
HOH
60
2
HOH
HOH
160
A
HOH
61
2
HOH
HOH
161
A
HOH
62
2
HOH
HOH
162
A
HOH
63
2
HOH
HOH
163
A
HOH
64
2
HOH
HOH
164
A
HOH
65
2
HOH
HOH
165
A
HOH
66
2
HOH
HOH
166
A
HOH
67
2
HOH
HOH
167
A
HOH
68
2
HOH
HOH
168
A
HOH
69
2
HOH
HOH
169
A
HOH
70
2
HOH
HOH
170
A
HOH
71
2
HOH
HOH
171
A
HOH
72
2
HOH
HOH
172
A
HOH
74
2
HOH
HOH
173
A
HOH
76
2
HOH
HOH
174
A
HOH
77
2
HOH
HOH
175
A
HOH
78
2
HOH
HOH
176
A
HOH
79
2
HOH
HOH
177
A
HOH
81
2
HOH
HOH
178
A
HOH
82
2
HOH
HOH
179
A
HOH
83
2
HOH
HOH
180
A
HOH
84
2
HOH
HOH
181
A
HOH
85
2
HOH
HOH
182
A
HOH
86
2
HOH
HOH
183
A
HOH
87
2
HOH
HOH
184
A
HOH
88
2
HOH
HOH
185
A
HOH
89
2
HOH
HOH
186
A
HOH
90
2
HOH
HOH
187
A
HOH
91
2
HOH
HOH
188
A
HOH
92
2
HOH
HOH
189
A
HOH
93
2
HOH
HOH
190
A
HOH
95
2
HOH
HOH
191
A
HOH
96
2
HOH
HOH
192
A
HOH
97
2
HOH
HOH
193
A
HOH
98
2
HOH
HOH
194
A
HOH
99
2
HOH
HOH
195
A
HOH
101
2
HOH
HOH
196
A
HOH
102
2
HOH
HOH
197
A
HOH
103
2
HOH
HOH
198
A
HOH
104
2
HOH
HOH
199
A
HOH
105
2
HOH
HOH
200
A
HOH
106
2
HOH
HOH
201
A
HOH
107
2
HOH
HOH
202
A
HOH
108
2
HOH
HOH
203
A
HOH
109
2
HOH
HOH
204
A
HOH
110
2
HOH
HOH
205
A
HOH
111
2
HOH
HOH
206
A
HOH
112
2
HOH
HOH
207
A
HOH
113
2
HOH
HOH
208
A
HOH
114
2
HOH
HOH
209
A
HOH
115
2
HOH
HOH
210
A
HOH
116
2
HOH
HOH
211
A
HOH
117
2
HOH
HOH
212
A
HOH
118
2
HOH
HOH
213
A
n
1
1
A
n
2
2
A
ASP
3
n
3
ASP
3
A
ARG
4
n
4
ARG
4
A
LYS
5
n
5
LYS
5
A
ALA
6
n
6
ALA
6
A
VAL
7
n
7
VAL
7
A
ILE
8
n
8
ILE
8
A
LYS
9
n
9
LYS
9
A
ASN
10
n
10
ASN
10
A
ALA
11
n
11
ALA
11
A
ASP
12
n
12
ASP
12
A
MET
13
n
13
MET
13
A
PRO
14
n
14
PRO
14
A
GLU
15
n
15
GLU
15
A
ASP
16
n
16
ASP
16
A
LEU
17
n
17
LEU
17
A
GLN
18
n
18
GLN
18
A
GLN
19
n
19
GLN
19
A
ASP
20
n
20
ASP
20
A
ALA
21
n
21
ALA
21
A
ILE
22
n
22
ILE
22
A
ASP
23
n
23
ASP
23
A
CYS
24
n
24
CYS
24
A
ALA
25
n
25
ALA
25
A
ASN
26
n
26
ASN
26
A
GLN
27
n
27
GLN
27
A
ALA
28
n
28
ALA
28
A
LEU
29
n
29
LEU
29
A
GLU
30
n
30
GLU
30
A
LYS
31
n
31
LYS
31
A
TYR
32
n
32
TYR
32
A
ASN
33
n
33
ASN
33
A
ILE
34
n
34
ILE
34
A
GLU
35
n
35
GLU
35
A
LYS
36
n
36
LYS
36
A
ASP
37
n
37
ASP
37
A
ILE
38
n
38
ILE
38
A
ALA
39
n
39
ALA
39
A
ALA
40
n
40
ALA
40
A
PHE
41
n
41
PHE
41
A
ILE
42
n
42
ILE
42
A
LYS
43
n
43
LYS
43
A
LYS
44
n
44
LYS
44
A
GLU
45
n
45
GLU
45
A
PHE
46
n
46
PHE
46
A
ASP
47
n
47
ASP
47
A
ARG
48
n
48
ARG
48
A
LYS
49
n
49
LYS
49
A
HIS
50
n
50
HIS
50
A
ASN
51
n
51
ASN
51
A
PRO
52
n
52
PRO
52
A
THR
53
n
53
THR
53
A
TRP
54
n
54
TRP
54
A
HIS
55
n
55
HIS
55
A
CYS
56
n
56
CYS
56
A
VAL
57
n
57
VAL
57
A
VAL
58
n
58
VAL
58
A
GLY
59
n
59
GLY
59
A
ARG
60
n
60
ARG
60
A
ASN
61
n
61
ASN
61
A
PHE
62
n
62
PHE
62
A
GLY
63
n
63
GLY
63
A
SER
64
n
64
SER
64
A
TYR
65
n
65
TYR
65
A
VAL
66
n
66
VAL
66
A
THR
67
n
67
THR
67
A
HIS
68
n
68
HIS
68
A
GLU
69
n
69
GLU
69
A
THR
70
n
70
THR
70
A
HIS
71
n
71
HIS
71
A
HIS
72
n
72
HIS
72
A
PHE
73
n
73
PHE
73
A
ILE
74
n
74
ILE
74
A
TYR
75
n
75
TYR
75
A
PHE
76
n
76
PHE
76
A
TYR
77
n
77
TYR
77
A
ILE
78
n
78
ILE
78
A
GLY
79
n
79
GLY
79
A
GLN
80
n
80
GLN
80
A
VAL
81
n
81
VAL
81
A
ALA
82
n
82
ALA
82
A
VAL
83
n
83
VAL
83
A
LEU
84
n
84
LEU
84
A
LEU
85
n
85
LEU
85
A
PHE
86
n
86
PHE
86
A
LYS
87
n
87
LYS
87
A
SER
88
n
88
SER
88
A
GLY
89
n
89
GLY
89
A
1.8397
0.2199
0.2934
1.7343
0.2568
0.5227
0.1527
-0.1518
-0.2679
-0.0245
-0.0448
0.0828
0.2608
-0.0004
-0.0308
0.5362
0.0586
-0.1152
0.1314
0.0234
0.0554
refined
23.1659
14.5167
-8.9376
X-RAY DIFFRACTION
2.6232
0.1486
-0.2742
2.7461
-0.3582
1.8207
0.1159
0.0253
-0.3402
-0.3372
-0.1163
0.1839
0.2625
0.2633
0.0247
0.1609
0.0617
-0.0365
0.1403
0.0173
0.1486
refined
25.9669
15.9956
3.3338
X-RAY DIFFRACTION
1.2398
-0.5894
0.2348
0.7679
-0.1599
1.2477
0.2761
0.1113
-0.3290
-0.3331
-0.0835
0.2235
0.2181
0.1621
0.0663
0.1684
0.0259
-0.0767
0.0790
-0.0076
0.1757
refined
19.4568
22.3133
-3.5210
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
chain 'A' and (resid 3 through 14 )
X-RAY DIFFRACTION
2
chain 'A' and (resid 15 through 50 )
X-RAY DIFFRACTION
3
chain 'A' and (resid 51 through 89 )
author_and_software_defined_assembly
PISA
2
dimeric
1950
-7
8790
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
0.8660254038
0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_555
y,x,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
7
A
N
VAL
7
A
O
TYR
77
A
O
TYR
77
A
N
ILE
78
A
N
ILE
78
A
O
VAL
81
A
O
VAL
81
A
O
ALA
82
A
O
ALA
82
A
N
GLY
59
A
N
GLY
59
1
A
HOH
175
B
HOH
1
A
MET
1
A
MET
1
1
Y
1
A
ALA
2
A
ALA
2
1
Y
1
A
ASP
12
-167.10
79.86
1
A
ASN
51
76.28
138.50
26.147
-0.33000
-0.16000
0.00000
-0.33000
0.00000
0.49000
0.967
0.952
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.2186
0.1926
0.1938
1.500
18.756
754
14921
14929
5.05
99.87
0.13
1
1.36
MOLECULAR REPLACEMENT
22.88
0.90
1.11
PDB ENTRY 1CMI
ML
FLAT BULK SOLVENT MODEL
0
0
0
0
0
1.500
18.756
113
827
0
0
714
0.008
761
1.150
1035
13.613
278
0.080
109
0.004
137
0.3004
0.2416
1.6158
149
2799
100.00
0.2135
0.2148
1.7783
183
2775
100.00
0.2219
0.1993
2.0353
142
2830
100.00
0.2078
0.1946
2.5633
146
2840
100.00
0.2099
0.1776
18.7577
134
2931
99.00
23.80
1.500
51.620
3RJS
14931
0.000
0.03500
0.03500
1
46.0000
6.100
99.7
0.25200
1.50
1.53
6.200
0.25200
1
6.00
100.0
refinement
PHENIX
1.8_1060
data reduction
HKL-2000
data scaling
HKL-2000
phasing
PHASER
refinement
REFMAC
5.5.0109
N
Crystal structure of Dynein Light Chain 8a (DLC8) from Toxoplasma gondii at 1.5 A resolution
1
N
N
2
N
N
A
PRO
14
A
PRO
14
HELX_P
A
TYR
32
A
TYR
32
1
1
19
A
ILE
34
A
ILE
34
HELX_P
A
ASN
51
A
ASN
51
1
2
18
MOTOR PROTEIN
Parasite, dynein light chain, LC8, DLC8, TgDLC8, DYNEIN, LIGHT CHAIN, PIN, DLC1, DYNLL1, MOTOR PROTEIN, TRANSPORT PROTEIN
A
PRO
52
A
PRO
52
1
A
THR
53
A
THR
53
1.45
A
PRO
52
A
PRO
52
1
A
THR
53
A
THR
53
-4.76
A1YTN0_TOXGO
UNP
1
1
A1YTN0
MADRKAVIKNADMPEDLQQDAIDCANQALEKYNIEKDIAAFIKKEFDRKHNPTWHCVVGRNFGSYVTHETHHFIYFYIGQ
VAVLLFKSG
1
89
3RJS
1
89
A1YTN0
A
1
1
89
4
anti-parallel
anti-parallel
anti-parallel
A
VAL
7
A
VAL
7
A
ASP
12
A
ASP
12
A
HIS
68
A
HIS
68
A
ILE
78
A
ILE
78
A
VAL
81
A
VAL
81
A
SER
88
A
SER
88
A
HIS
55
A
HIS
55
A
GLY
59
A
GLY
59
155
H 3 2