0.007946 0.004588 0.000000 0.000000 0.009175 0.000000 0.000000 0.000000 0.008593 0.000000 0.000000 0.000000 Shumilin, I.A. Jha, K.N. Cymborowski, M. Herr, J.C. 0000-0001-7075-7090 Minor, W. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 18 90.000 90.000 120.000 125.849 125.849 116.368 97986 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C7 H8 N4 O2 180.164 THEOPHYLLINE non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N O N 235 N C N 236 N C N 237 N SE N 238 N C N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N S N 305 N O N 306 N O N 307 N O N 308 N O N 309 N C Y 310 N N Y 311 N C N 312 N O Y 313 N N N 314 N C Y 315 N C Y 316 N C Y 317 N C N 318 N O Y 319 N N Y 320 N C Y 321 N N N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N N N 331 S C N 332 N C N 333 N O N 334 R C N 335 N O N 336 N C N 337 N O N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N N N 348 S C N 349 N C N 350 N O N 351 N C Y 352 N C Y 353 N C Y 354 N C Y 355 N N Y 356 N C Y 357 N C Y 358 N C Y 359 N C Y 360 N C N 361 N O N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N N N 375 S C N 376 N C N 377 N O N 378 N C Y 379 N C Y 380 N C Y 381 N C Y 382 N C Y 383 N C Y 384 N C N 385 N O N 386 N O N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N N N 399 S C N 400 N C N 401 N O N 402 N C N 403 N C N 404 N C N 405 N O N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N doub N 291 N doub N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing Y 298 N sing Y 299 N sing N 300 N doub Y 301 N sing N 302 N sing Y 303 N sing N 304 N sing N 305 N sing N 306 N sing Y 307 N doub Y 308 N sing Y 309 N sing Y 310 N sing N 311 N doub Y 312 N sing N 313 N sing Y 314 N doub N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N doub N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N doub N 339 N sing N 340 N sing N 341 N sing N 342 N sing Y 343 N doub Y 344 N sing Y 345 N sing N 346 N sing Y 347 N doub Y 348 N sing Y 349 N sing N 350 N sing Y 351 N sing Y 352 N doub N 353 N sing Y 354 N doub N 355 N sing Y 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N doub N 367 N sing N 368 N sing N 369 N sing N 370 N sing Y 371 N doub Y 372 N sing Y 373 N sing N 374 N sing Y 375 N doub N 376 N sing Y 377 N doub N 378 N sing Y 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N doub N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing UK Structure STRUE6 2005 0969-2126 20 1715 1725 10.1016/j.str.2012.07.016 22940582 Identification of unknown protein function using metabolite cocktail screening. 2012 0000-0001-7075-7090 10.2210/pdb3rox/pdb pdb_00003rox 100.0 1 MIRRORS CCD 2009-06-11 ADSC QUANTUM 210r SI(111) SINGLE WAVELENGTH M x-ray 1 0.97918 1.0 0.089 97986 19-BM APS 0.97918 SYNCHROTRON APS BEAMLINE 19-BM 29872.963 Apolipoprotein A-I-binding protein 1 man polymer 96.063 SULFATE ION 1 syn non-polymer 180.164 THEOPHYLLINE 1 syn non-polymer 18.015 water 14 nat water AI-BP no yes (MSE)QQSVCRARPIWWGTQRRGSET(MSE)AGAAVKYLSQEEAQAVDQELFNEYQFSVDQL(MSE)ELAGLSCATAIAK AYPPTS(MSE)SKSPPTVLVICGPGNNGGDGLVCARHLKLFGYQPTIYYPKRPNKPLFTGLVTQCQK(MSE)DIPFLGE (MSE)PPEP(MSE)(MSE)VDELYELVVDAIFGFSFKGDVREPFHSILSVLSGLTVPIASIDIPSGWDVEKGNPSGIQPD LLISLTAPKKSATHFTGRYHYLGGRFVPPALEKKYQLNLPSYPDTECVYRLQHHHHHH MQQSVCRARPIWWGTQRRGSETMAGAAVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPPTSMSKSPP TVLVICGPGNNGGDGLVCARHLKLFGYQPTIYYPKRPNKPLFTGLVTQCQKMDIPFLGEMPPEPMMVDELYELVVDAIFG FSFKGDVREPFHSILSVLSGLTVPIASIDIPSGWDVEKGNPSGIQPDLLISLTAPKKSATHFTGRYHYLGGRFVPPALEK KYQLNLPSYPDTECVYRLQHHHHHH A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n mouse sample Aibp, Apoa1bp 10090 Mus musculus 562 ESCHERICHIA COLI BL21(DE3) PLASMID PET21A 1 2.97 58.56 VAPOR DIFFUSION, HANGING DROP 4.6 0.1 M SODIUM ACETATE, 1.5 M AMMONIUM SULFATE, PH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 audit_author citation_author database_2 struct_conn struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond pdbx_initial_refinement_model chem_comp_atom chem_comp_bond repository Initial release Database references Database references Derived calculations Structure summary Data collection Refinement description Data collection 1 0 2012-07-18 1 1 2012-10-31 1 2 2022-04-13 1 3 2023-09-13 1 4 2023-12-06 _audit_author.identifier_ORCID _citation_author.identifier_ORCID _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _chem_comp_atom.atom_id _chem_comp_bond.atom_id_2 Apo-protein Apo-protein RCSB Y RCSB 2011-04-26 REL REL SO4 SULFATE ION TEP THEOPHYLLINE HOH water 2O8N PDB ENTRY 2O8N PDB experimental model SO4 1 2 SO4 SO4 265 A TEP 2 3 TEP TEP 266 A HOH 1 4 HOH HOH 267 A HOH 2 4 HOH HOH 268 A HOH 3 4 HOH HOH 269 A HOH 4 4 HOH HOH 270 A HOH 5 4 HOH HOH 271 A HOH 6 4 HOH HOH 272 A HOH 7 4 HOH HOH 273 A HOH 8 4 HOH HOH 274 A HOH 9 4 HOH HOH 275 A HOH 10 4 HOH HOH 276 A HOH 11 4 HOH HOH 277 A HOH 12 4 HOH HOH 278 A HOH 13 4 HOH HOH 279 A HOH 14 4 HOH HOH 280 A n 1 0 A n 2 1 A n 3 2 A n 4 3 A n 5 4 A n 6 5 A n 7 6 A n 8 7 A n 9 8 A n 10 9 A n 11 10 A n 12 11 A n 13 12 A n 14 13 A n 15 14 A n 16 15 A n 17 16 A n 18 17 A n 19 18 A n 20 19 A n 21 20 A n 22 21 A n 23 22 A n 24 23 A n 25 24 A n 26 25 A ALA 26 n 27 ALA 26 A VAL 27 n 28 VAL 27 A LYS 28 n 29 LYS 28 A TYR 29 n 30 TYR 29 A LEU 30 n 31 LEU 30 A SER 31 n 32 SER 31 A GLN 32 n 33 GLN 32 A GLU 33 n 34 GLU 33 A GLU 34 n 35 GLU 34 A ALA 35 n 36 ALA 35 A GLN 36 n 37 GLN 36 A ALA 37 n 38 ALA 37 A VAL 38 n 39 VAL 38 A ASP 39 n 40 ASP 39 A GLN 40 n 41 GLN 40 A GLU 41 n 42 GLU 41 A LEU 42 n 43 LEU 42 A PHE 43 n 44 PHE 43 A ASN 44 n 45 ASN 44 A GLU 45 n 46 GLU 45 A TYR 46 n 47 TYR 46 A GLN 47 n 48 GLN 47 A PHE 48 n 49 PHE 48 A SER 49 n 50 SER 49 A VAL 50 n 51 VAL 50 A ASP 51 n 52 ASP 51 A GLN 52 n 53 GLN 52 A LEU 53 n 54 LEU 53 A MSE 54 n 55 MSE 54 A GLU 55 n 56 GLU 55 A LEU 56 n 57 LEU 56 A ALA 57 n 58 ALA 57 A GLY 58 n 59 GLY 58 A LEU 59 n 60 LEU 59 A SER 60 n 61 SER 60 A CYS 61 n 62 CYS 61 A ALA 62 n 63 ALA 62 A THR 63 n 64 THR 63 A ALA 64 n 65 ALA 64 A ILE 65 n 66 ILE 65 A ALA 66 n 67 ALA 66 A LYS 67 n 68 LYS 67 A ALA 68 n 69 ALA 68 A TYR 69 n 70 TYR 69 A PRO 70 n 71 PRO 70 A PRO 71 n 72 PRO 71 A THR 72 n 73 THR 72 A SER 73 n 74 SER 73 A MSE 74 n 75 MSE 74 A SER 75 n 76 SER 75 A LYS 76 n 77 LYS 76 A SER 77 n 78 SER 77 A PRO 78 n 79 PRO 78 A PRO 79 n 80 PRO 79 A THR 80 n 81 THR 80 A VAL 81 n 82 VAL 81 A LEU 82 n 83 LEU 82 A VAL 83 n 84 VAL 83 A ILE 84 n 85 ILE 84 A CYS 85 n 86 CYS 85 A GLY 86 n 87 GLY 86 A PRO 87 n 88 PRO 87 A GLY 88 n 89 GLY 88 A ASN 89 n 90 ASN 89 A ASN 90 n 91 ASN 90 A GLY 91 n 92 GLY 91 A GLY 92 n 93 GLY 92 A ASP 93 n 94 ASP 93 A GLY 94 n 95 GLY 94 A LEU 95 n 96 LEU 95 A VAL 96 n 97 VAL 96 A CYS 97 n 98 CYS 97 A ALA 98 n 99 ALA 98 A ARG 99 n 100 ARG 99 A HIS 100 n 101 HIS 100 A LEU 101 n 102 LEU 101 A LYS 102 n 103 LYS 102 A LEU 103 n 104 LEU 103 A PHE 104 n 105 PHE 104 A GLY 105 n 106 GLY 105 A TYR 106 n 107 TYR 106 A GLN 107 n 108 GLN 107 A PRO 108 n 109 PRO 108 A THR 109 n 110 THR 109 A ILE 110 n 111 ILE 110 A TYR 111 n 112 TYR 111 A TYR 112 n 113 TYR 112 A PRO 113 n 114 PRO 113 A LYS 114 n 115 LYS 114 A ARG 115 n 116 ARG 115 A PRO 116 n 117 PRO 116 A ASN 117 n 118 ASN 117 A LYS 118 n 119 LYS 118 A PRO 119 n 120 PRO 119 A LEU 120 n 121 LEU 120 A PHE 121 n 122 PHE 121 A THR 122 n 123 THR 122 A GLY 123 n 124 GLY 123 A LEU 124 n 125 LEU 124 A VAL 125 n 126 VAL 125 A THR 126 n 127 THR 126 A GLN 127 n 128 GLN 127 A CYS 128 n 129 CYS 128 A GLN 129 n 130 GLN 129 A LYS 130 n 131 LYS 130 A MSE 131 n 132 MSE 131 A ASP 132 n 133 ASP 132 A ILE 133 n 134 ILE 133 A PRO 134 n 135 PRO 134 A PHE 135 n 136 PHE 135 A LEU 136 n 137 LEU 136 A GLY 137 n 138 GLY 137 A GLU 138 n 139 GLU 138 A MSE 139 n 140 MSE 139 A PRO 140 n 141 PRO 140 A PRO 141 n 142 PRO 141 A GLU 142 n 143 GLU 142 A PRO 143 n 144 PRO 143 A MSE 144 n 145 MSE 144 A MSE 145 n 146 MSE 145 A VAL 146 n 147 VAL 146 A ASP 147 n 148 ASP 147 A GLU 148 n 149 GLU 148 A LEU 149 n 150 LEU 149 A TYR 150 n 151 TYR 150 A GLU 151 n 152 GLU 151 A LEU 152 n 153 LEU 152 A VAL 153 n 154 VAL 153 A VAL 154 n 155 VAL 154 A ASP 155 n 156 ASP 155 A ALA 156 n 157 ALA 156 A ILE 157 n 158 ILE 157 A PHE 158 n 159 PHE 158 A GLY 159 n 160 GLY 159 A PHE 160 n 161 PHE 160 A SER 161 n 162 SER 161 A PHE 162 n 163 PHE 162 A LYS 163 n 164 LYS 163 A GLY 164 n 165 GLY 164 A ASP 165 n 166 ASP 165 A VAL 166 n 167 VAL 166 A ARG 167 n 168 ARG 167 A GLU 168 n 169 GLU 168 A PRO 169 n 170 PRO 169 A PHE 170 n 171 PHE 170 A HIS 171 n 172 HIS 171 A SER 172 n 173 SER 172 A ILE 173 n 174 ILE 173 A LEU 174 n 175 LEU 174 A SER 175 n 176 SER 175 A VAL 176 n 177 VAL 176 A LEU 177 n 178 LEU 177 A SER 178 n 179 SER 178 A GLY 179 n 180 GLY 179 A LEU 180 n 181 LEU 180 A THR 181 n 182 THR 181 A VAL 182 n 183 VAL 182 A PRO 183 n 184 PRO 183 A ILE 184 n 185 ILE 184 A ALA 185 n 186 ALA 185 A SER 186 n 187 SER 186 A ILE 187 n 188 ILE 187 A ASP 188 n 189 ASP 188 A ILE 189 n 190 ILE 189 A PRO 190 n 191 PRO 190 A SER 191 n 192 SER 191 A GLY 192 n 193 GLY 192 A TRP 193 n 194 TRP 193 A ASP 194 n 195 ASP 194 A VAL 195 n 196 VAL 195 A GLU 196 n 197 GLU 196 A LYS 197 n 198 LYS 197 A GLY 198 n 199 GLY 198 A ASN 199 n 200 ASN 199 A PRO 200 n 201 PRO 200 A SER 201 n 202 SER 201 A GLY 202 n 203 GLY 202 A ILE 203 n 204 ILE 203 A GLN 204 n 205 GLN 204 A PRO 205 n 206 PRO 205 A ASP 206 n 207 ASP 206 A LEU 207 n 208 LEU 207 A LEU 208 n 209 LEU 208 A ILE 209 n 210 ILE 209 A SER 210 n 211 SER 210 A LEU 211 n 212 LEU 211 A THR 212 n 213 THR 212 A ALA 213 n 214 ALA 213 A PRO 214 n 215 PRO 214 A LYS 215 n 216 LYS 215 A LYS 216 n 217 LYS 216 A SER 217 n 218 SER 217 A ALA 218 n 219 ALA 218 A THR 219 n 220 THR 219 A HIS 220 n 221 HIS 220 A PHE 221 n 222 PHE 221 A THR 222 n 223 THR 222 A GLY 223 n 224 GLY 223 A ARG 224 n 225 ARG 224 A TYR 225 n 226 TYR 225 A HIS 226 n 227 HIS 226 A TYR 227 n 228 TYR 227 A LEU 228 n 229 LEU 228 A GLY 229 n 230 GLY 229 A GLY 230 n 231 GLY 230 A ARG 231 n 232 ARG 231 A PHE 232 n 233 PHE 232 A VAL 233 n 234 VAL 233 A PRO 234 n 235 PRO 234 A PRO 235 n 236 PRO 235 A ALA 236 n 237 ALA 236 A LEU 237 n 238 LEU 237 A GLU 238 n 239 GLU 238 A LYS 239 n 240 LYS 239 A LYS 240 n 241 LYS 240 A TYR 241 n 242 TYR 241 A GLN 242 n 243 GLN 242 A LEU 243 n 244 LEU 243 A ASN 244 n 245 ASN 244 A LEU 245 n 246 LEU 245 A PRO 246 n 247 PRO 246 A SER 247 n 248 SER 247 A TYR 248 n 249 TYR 248 A PRO 249 n 250 PRO 249 A ASP 250 n 251 ASP 250 A THR 251 n 252 THR 251 A GLU 252 n 253 GLU 252 A CYS 253 n 254 CYS 253 A VAL 254 n 255 VAL 254 A TYR 255 n 256 TYR 255 A ARG 256 n 257 ARG 256 A LEU 257 n 258 LEU 257 A GLN 258 n 259 GLN 258 A n 260 259 A n 261 260 A n 262 261 A n 263 262 A n 264 263 A n 265 264 A 7.1268 5.2273 -0.1012 17.4306 -3.5012 6.1815 0.1557 0.4599 -0.2598 -3.0888 -0.8980 -2.7460 1.1740 0.7274 0.7424 1.1385 0.4769 0.7412 0.3036 0.3601 0.7580 refined 14.0520 28.6120 25.9580 X-RAY DIFFRACTION 1.1636 -0.1882 -0.0588 13.1232 -6.4708 4.2356 0.2395 0.0088 0.0853 0.5099 -0.2468 0.0307 -0.2729 -0.0392 0.0073 0.3042 -0.0702 -0.0527 0.1045 0.0249 0.1638 refined 3.3930 24.5720 46.0330 X-RAY DIFFRACTION 3.1653 -0.2218 0.6278 12.6515 -3.0531 3.0704 0.2288 0.0145 -0.0580 0.1918 -1.1596 -1.9242 -0.0454 0.4704 0.9308 0.1964 -0.0299 -0.1450 0.1759 0.2603 0.5087 refined 12.8740 18.2240 47.9230 X-RAY DIFFRACTION 1.0929 -0.3282 0.0643 8.8005 -2.7048 5.2286 0.1845 0.1202 -0.2068 -2.1439 -0.4154 -0.5849 1.0938 0.2752 0.2308 0.7602 0.1218 0.0948 0.0937 0.0547 0.2274 refined 7.9920 11.3680 35.7080 X-RAY DIFFRACTION 2.6288 0.2822 -0.4955 11.2160 -3.4135 3.6445 0.2289 0.1704 0.0063 -2.6128 -0.1816 0.2365 0.9242 -0.3552 -0.0473 0.9940 0.0048 -0.1404 0.1629 0.0563 0.1264 refined 0.9830 26.7800 26.9310 X-RAY DIFFRACTION A 26 A 55 X-RAY DIFFRACTION 1 A 56 A 109 X-RAY DIFFRACTION 2 A 110 A 162 X-RAY DIFFRACTION 3 A 163 A 214 X-RAY DIFFRACTION 4 A 215 A 258 X-RAY DIFFRACTION 5 author_and_software_defined_assembly PISA 2 dimeric 2800 -16 19080 A MSE 54 SELENOMETHIONINE A MSE 55 MET A MSE 74 SELENOMETHIONINE A MSE 75 MET A MSE 131 SELENOMETHIONINE A MSE 132 MET A MSE 139 SELENOMETHIONINE A MSE 140 MET A MSE 144 SELENOMETHIONINE A MSE 145 MET A MSE 145 SELENOMETHIONINE A MSE 146 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 17_555 x-y+1/3,-y+2/3,-z+2/3 crystal symmetry operation 0.0000000000 72.6589540272 77.5786666667 A O THR 109 A O THR 110 A N VAL 83 A N VAL 84 A N LEU 82 A N LEU 83 A O VAL 154 A O VAL 155 A N ASP 155 A N ASP 156 A O ALA 185 A O ALA 186 A N SER 186 A N SER 187 A O LEU 207 A O LEU 208 A N SER 210 A N SER 211 A O GLY 229 A O GLY 230 A N LEU 228 A N LEU 229 A O TYR 255 A O TYR 256 1 A MSE 0 A MSE 1 1 Y 1 A GLN 1 A GLN 2 1 Y 1 A GLN 2 A GLN 3 1 Y 1 A SER 3 A SER 4 1 Y 1 A VAL 4 A VAL 5 1 Y 1 A CYS 5 A CYS 6 1 Y 1 A ARG 6 A ARG 7 1 Y 1 A ALA 7 A ALA 8 1 Y 1 A ARG 8 A ARG 9 1 Y 1 A PRO 9 A PRO 10 1 Y 1 A ILE 10 A ILE 11 1 Y 1 A TRP 11 A TRP 12 1 Y 1 A TRP 12 A TRP 13 1 Y 1 A GLY 13 A GLY 14 1 Y 1 A THR 14 A THR 15 1 Y 1 A GLN 15 A GLN 16 1 Y 1 A ARG 16 A ARG 17 1 Y 1 A ARG 17 A ARG 18 1 Y 1 A GLY 18 A GLY 19 1 Y 1 A SER 19 A SER 20 1 Y 1 A GLU 20 A GLU 21 1 Y 1 A THR 21 A THR 22 1 Y 1 A MSE 22 A MSE 23 1 Y 1 A ALA 23 A ALA 24 1 Y 1 A GLY 24 A GLY 25 1 Y 1 A ALA 25 A ALA 26 1 Y 1 A HIS 259 A HIS 260 1 Y 1 A HIS 260 A HIS 261 1 Y 1 A HIS 261 A HIS 262 1 Y 1 A HIS 262 A HIS 263 1 Y 1 A HIS 263 A HIS 264 1 Y 1 A HIS 264 A HIS 265 1 Y 1 A ASP 165 59.45 75.42 1 A ASP 188 77.31 -58.47 1 A ASN 199 170.18 103.48 1 A THR 212 71.83 -69.01 1 A PHE 232 -150.55 15.10 1 A ASP 250 35.14 -110.51 147.34 66.322 3.14 -1.850 -0.920 0.000 -1.850 0.000 2.770 0.961 0.939 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS; U VALUES: RESIDUAL ONLY 0.228 0.177 0.180 2.400 50.000 656 13237 5.000 94.430 1.00 1.00 17.312 0.182 RANDOM 1 THROUGHOUT 0.00 MOLECULAR REPLACEMENT 0.217 0.800 0.800 1.200 PDB ENTRY 2O8N MAXIMUM LIKELIHOOD BABINET MODEL WITH MASK 2.400 50.000 14 1840 18 0 1808 0.019 0.022 1877 0.001 0.020 1274 1.786 2.005 2559 0.967 3.000 3133 6.578 5.000 232 41.249 24.667 75 17.161 15.000 301 17.908 15.000 6 0.094 0.200 278 0.010 0.021 2061 0.001 0.020 351 0.786 1.500 1169 0.183 1.500 460 1.442 2.000 1900 2.585 3.000 708 3.924 4.500 659 0.288 0.231 2.463 57 962 1019 20 98.930 45.6 2.35 50.00 3ROX 97986 97986 0 -3 0.089 0.089 1 42.447 6.9 94.9 0.498 2.35 2.39 5.677 0.498 1 7.2 100.0 refinement Garib N. Murshudov garib@ysbl.york.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/refmac5.html REFMAC program 5.5.0109 data extraction PDB help@deposit.rcsb.org June 11, 2008 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.006 data collection HKL-3000 data reduction HKL-3000 data scaling HKL-3000 phasing HKL-3000 MOLREP Crystal Structure of Mouse Apolipoprotein A-I Binding Protein in Complex with Theophylline 1 N N 2 N N 3 N N 4 N N A SER 31 A SER 32 HELX_P A GLU 45 A GLU 46 1 1 15 A SER 49 A SER 50 HELX_P A TYR 69 A TYR 70 1 2 21 A PRO 70 A PRO 71 HELX_P A MSE 74 A MSE 75 5 3 5 A GLY 88 A GLY 89 HELX_P A GLY 105 A GLY 106 1 4 18 A LYS 118 A LYS 119 HELX_P A MSE 131 A MSE 132 1 5 14 A GLU 142 A GLU 143 HELX_P A TYR 150 A TYR 151 1 6 9 A PRO 169 A PRO 170 HELX_P A GLY 179 A GLY 180 1 7 11 A LYS 215 A LYS 216 HELX_P A HIS 220 A HIS 221 5 8 6 A PRO 234 A PRO 235 HELX_P A TYR 241 A TYR 242 1 9 8 covale 1.312 both A LEU 53 A C LEU 54 1_555 A MSE 54 A N MSE 55 1_555 covale 1.312 both A MSE 54 A C MSE 55 1_555 A GLU 55 A N GLU 56 1_555 covale 1.327 both A SER 73 A C SER 74 1_555 A MSE 74 A N MSE 75 1_555 covale 1.330 both A MSE 74 A C MSE 75 1_555 A SER 75 A N SER 76 1_555 covale 1.338 both A LYS 130 A C LYS 131 1_555 A MSE 131 A N MSE 132 1_555 covale 1.333 both A MSE 131 A C MSE 132 1_555 A ASP 132 A N ASP 133 1_555 covale 1.326 both A GLU 138 A C GLU 139 1_555 A MSE 139 A N MSE 140 1_555 covale 1.333 both A MSE 139 A C MSE 140 1_555 A PRO 140 A N PRO 141 1_555 covale 1.312 both A PRO 143 A C PRO 144 1_555 A MSE 144 A N MSE 145 1_555 covale 1.323 both A MSE 144 A C MSE 145 1_555 A MSE 145 A N MSE 146 1_555 covale 1.342 both A MSE 145 A C MSE 146 1_555 A VAL 146 A N VAL 147 1_555 PROTEIN BINDING ROSSMANN FOLD, PROTEIN BINDING A SER 77 A SER 78 1 A PRO 78 A PRO 79 -2.19 A GLY 164 A GLY 165 1 A ASP 165 A ASP 166 14.67 A GLU 168 A GLU 169 1 A PRO 169 A PRO 170 1.27 AIBP_MOUSE UNP 1 25 Q8K4Z3 QQSVCRARPIWWGTQRRGSETMAGAAVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPPTSMSKSPPT VLVICGPGNNGGDGLVCARHLKLFGYQPTIYYPKRPNKPLFTGLVTQCQKMDIPFLGEMPPEPMMVDELYELVVDAIFGF SFKGDVREPFHSILSVLSGLTVPIASIDIPSGWDVEKGNPSGIQPDLLISLTAPKKSATHFTGRYHYLGGRFVPPALEKK YQLNLPSYPDTECVYRLQ 25 282 3ROX 1 258 Q8K4Z3 A 1 2 259 1 expression tag MSE 0 3ROX A Q8K4Z3 UNP 1 1 expression tag HIS 259 3ROX A Q8K4Z3 UNP 260 1 expression tag HIS 260 3ROX A Q8K4Z3 UNP 261 1 expression tag HIS 261 3ROX A Q8K4Z3 UNP 262 1 expression tag HIS 262 3ROX A Q8K4Z3 UNP 263 1 expression tag HIS 263 3ROX A Q8K4Z3 UNP 264 1 expression tag HIS 264 3ROX A Q8K4Z3 UNP 265 7 parallel parallel parallel parallel parallel anti-parallel A GLN 107 A GLN 108 A TYR 111 A TYR 112 A THR 80 A THR 81 A CYS 85 A CYS 86 A VAL 153 A VAL 154 A ALA 156 A ALA 157 A ILE 184 A ILE 185 A ILE 187 A ILE 188 A LEU 207 A LEU 208 A LEU 211 A LEU 212 A TYR 225 A TYR 226 A GLY 229 A GLY 230 A VAL 254 A VAL 255 A ARG 256 A ARG 257 BINDING SITE FOR RESIDUE SO4 A 265 A SO4 265 Software 6 BINDING SITE FOR RESIDUE TEP A 266 A TEP 266 Software 9 A ASN 89 A ASN 90 6 1_555 A ASN 90 A ASN 91 6 1_555 A GLY 159 A GLY 160 6 1_555 A PHE 160 A PHE 161 6 1_555 A SER 161 A SER 162 6 1_555 A PHE 162 A PHE 163 6 1_555 A VAL 38 A VAL 39 9 1_555 A ASP 39 A ASP 40 9 1_555 A LEU 42 A LEU 43 9 1_555 A PHE 160 A PHE 161 9 1_555 A ASP 188 A ASP 189 9 1_555 A LEU 211 A LEU 212 9 1_555 A THR 212 A THR 213 9 1_555 A LYS 215 A LYS 216 9 1_555 A HOH 271 D HOH 9 1_555 155 H 3 2