0.010879 0.000000 0.000000 0.000000 0.010879 0.000000 0.000000 0.000000 0.005895 0.000000 0.000000 0.000000 Shumilin, I.A. Cymborowski, M. Joachimiak, A. 0000-0001-7075-7090 Minor, W. Midwest Center for Structural Genomics (MCSG) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 16 90.000 90.000 90.000 91.920 91.920 169.630 281605 C3 H7 N O2 89.093 y ALANINE L-peptide linking C10 H14 N5 O7 P 347.221 ADENOSINE MONOPHOSPHATE non-polymer C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer C21 H32 N7 O18 P3 763.436 BETA-6-HYDROXY-1,4,5,6-TETRAHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N P N 15 N O N 16 N O N 17 N O N 18 N O N 19 N C N 20 R C N 21 N O N 22 S C N 23 N O N 24 R C N 25 N O N 26 R C Y 27 N N Y 28 N C Y 29 N N Y 30 N C Y 31 N C N 32 N N Y 33 N N Y 34 N C Y 35 N N Y 36 N C N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N N N 52 S C N 53 N C N 54 N O N 55 N C N 56 N C N 57 N C N 58 N N N 59 N C N 60 N N N 61 N N N 62 N O N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N N N 79 S C N 80 N C N 81 N O N 82 N C N 83 N C N 84 N O N 85 N N N 86 N O N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N N N 96 S C N 97 N C N 98 N O N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N N N 112 R C N 113 N C N 114 N O N 115 N C N 116 N S N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N N N 126 S C N 127 N C N 128 N O N 129 N C N 130 N C N 131 N C N 132 N O N 133 N N N 134 N O N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N N N 146 S C N 147 N C N 148 N O N 149 N C N 150 N C N 151 N C N 152 N O N 153 N O N 154 N O N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N N N 165 N C N 166 N C N 167 N O N 168 N O N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N N N 175 S C N 176 N C N 177 N O N 178 N C Y 179 N C Y 180 N N Y 181 N C Y 182 N C Y 183 N N N 184 N O N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N O N 196 N H N 197 N H N 198 N N N 199 S C N 200 N C N 201 N O N 202 S C N 203 N C N 204 N C N 205 N C N 206 N O N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N N N 221 S C N 222 N C N 223 N O N 224 N C N 225 N C N 226 N C N 227 N C N 228 N O N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N N N 243 S C N 244 N C N 245 N O N 246 N C N 247 N C N 248 N C N 249 N C N 250 N N N 251 N O N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N N N 268 S C N 269 N C N 270 N O N 271 N C N 272 N C N 273 N S N 274 N C N 275 N O N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N MG N 288 N P N 289 N O N 290 N O N 291 N O N 292 N P N 293 N P N 294 R C N 295 R C N 296 N N Y 297 N N N 298 R C N 299 N O N 300 R C N 301 N O N 302 N C Y 303 N C N 304 R C N 305 N O N 306 S C N 307 N O N 308 N C Y 309 N N N 310 R C N 311 N O N 312 N C Y 313 N C N 314 N O N 315 R C Y 316 N C N 317 N C N 318 N O N 319 N C N 320 N C N 321 N O N 322 S C N 323 N O Y 324 N C N 325 N N Y 326 N N N 327 N C N 328 N N N 329 N O Y 330 N C Y 331 N N N 332 N O N 333 N O N 334 N O N 335 N O N 336 N O N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N N N 370 S C N 371 N C N 372 N O N 373 N C Y 374 N C Y 375 N C Y 376 N C Y 377 N C Y 378 N C Y 379 N C N 380 N O N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N N N 393 S C N 394 N C N 395 N O N 396 N C N 397 N C N 398 N C N 399 N O N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N N N 410 S C N 411 N C N 412 N O N 413 N C N 414 N O N 415 N O N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N N N 424 S C N 425 N C N 426 N O N 427 R C N 428 N O N 429 N C N 430 N O N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N N N 441 S C N 442 N C N 443 N O N 444 N C Y 445 N C Y 446 N C Y 447 N C Y 448 N N Y 449 N C Y 450 N C Y 451 N C Y 452 N C Y 453 N C N 454 N O N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N H N 466 N H N 467 N N N 468 S C N 469 N C N 470 N O N 471 N C Y 472 N C Y 473 N C Y 474 N C Y 475 N C Y 476 N C Y 477 N C N 478 N O N 479 N O N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N H N 491 N N N 492 S C N 493 N C N 494 N O N 495 N C N 496 N C N 497 N C N 498 N O N 499 N H N 500 N H N 501 N H N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N doub N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing Y 37 N sing Y 38 N sing Y 39 N doub N 40 N sing Y 41 N sing Y 42 N sing Y 43 N doub N 44 N sing Y 45 N doub N 46 N sing N 47 N sing Y 48 N sing Y 49 N doub N 50 N sing Y 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N doub N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N doub N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N doub N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N doub N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N doub N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N doub N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N doub N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N doub N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N doub N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N doub N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N doub Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N doub N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N doub N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N doub N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N doub N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N doub N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing Y 300 N doub Y 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N doub N 310 N sing Y 311 N doub N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing Y 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing Y 330 N doub Y 331 N sing N 332 N sing N 333 N sing N 334 N sing Y 335 N sing Y 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing Y 352 N doub N 353 N sing N 354 N doub N 355 N sing N 356 N sing Y 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N doub N 368 N sing N 369 N sing N 370 N sing N 371 N sing Y 372 N doub Y 373 N sing Y 374 N sing N 375 N sing Y 376 N doub N 377 N sing Y 378 N doub N 379 N sing Y 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N doub N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N doub N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N doub N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N doub N 437 N sing N 438 N sing N 439 N sing N 440 N sing Y 441 N doub Y 442 N sing Y 443 N sing N 444 N sing Y 445 N doub Y 446 N sing Y 447 N sing N 448 N sing Y 449 N sing Y 450 N doub N 451 N sing Y 452 N doub N 453 N sing Y 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N doub N 465 N sing N 466 N sing N 467 N sing N 468 N sing Y 469 N doub Y 470 N sing Y 471 N sing N 472 N sing Y 473 N doub N 474 N sing Y 475 N doub N 476 N sing Y 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N doub N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N sing UK Structure STRUE6 2005 0969-2126 20 1715 1725 10.1016/j.str.2012.07.016 22940582 Identification of unknown protein function using metabolite cocktail screening. 2012 0000-0001-7075-7090 10.2210/pdb3rpz/pdb pdb_00003rpz 100.0 1 MIRRORS CCD 2009-10-16 ADSC QUANTUM 210r 1.00 degrees, 9.00 sec, detector distance 140.00 mm scans SI(111) SINGLE WAVELENGTH M x-ray 1 0.97918 1.0 0.086 281605 19-BM APS 0.97918 SYNCHROTRON APS BEAMLINE 19-BM 30176.439 ADP/ATP-dependent NAD(P)H-hydrate dehydratase 4.2.1.93 1 man polymer 24.305 MAGNESIUM ION 1 syn non-polymer 347.221 ADENOSINE MONOPHOSPHATE 1 syn non-polymer 763.436 BETA-6-HYDROXY-1,4,5,6-TETRAHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE 1 syn non-polymer 18.015 water 252 nat water no no SNAMNVPFWTEEHVRATLPERDAESHKGTYGTALLLAGSDDMPGAALLAGLGAMRSGLGKLVIGTSENVIPLIVPVLPEA TYWRDGWKKAADAQLEETYRAIAIGPGLPQTESVQQAVDHVLTADCPVILDAGALAKRTYPKREGPVILTPHPGEFFRMT GVPVNELQKKRAEYAKEWAAQLQTVIVLKGNQTVIAFPDGDCWLNPTGNGALAKGGTGDTLTGMILGMLCCHEDPKHAVL NAVYLHGACAELWTDEHSAHTLLAHELSDILPRVWKRFE SNAMNVPFWTEEHVRATLPERDAESHKGTYGTALLLAGSDDMPGAALLAGLGAMRSGLGKLVIGTSENVIPLIVPVLPEA TYWRDGWKKAADAQLEETYRAIAIGPGLPQTESVQQAVDHVLTADCPVILDAGALAKRTYPKREGPVILTPHPGEFFRMT GVPVNELQKKRAEYAKEWAAQLQTVIVLKGNQTVIAFPDGDCWLNPTGNGALAKGGTGDTLTGMILGMLCCHEDPKHAVL NAVYLHGACAELWTDEHSAHTLLAHELSDILPRVWKRFE A APC102301 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample BSU38720, yxkO 1423 Bacillus subtilis 511693 Escherichia coli BL21-CodonPlus (DE3)-RIPL PLASMID pMCSG19 1 2.97 58.56 VAPOR DIFFUSION, HANGING DROP 7.5 0.005 M ATP, 0.18 M Magnesium Cloride, 13.5%(v/v) PEG 400, 10%(v/v) Glycerol, 0.09 M HEPES pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 Midwest Center for Structural Genomics MCSG PSI:Biology audit_author citation_author database_2 pdbx_struct_conn_angle pdbx_struct_special_symmetry struct_conn struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Structure summary Database references Database references Derived calculations Structure summary Data collection Refinement description 1 0 2011-07-27 1 1 2011-09-21 1 2 2013-01-09 1 3 2022-04-13 1 4 2023-09-13 _audit_author.identifier_ORCID _citation_author.identifier_ORCID _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr2_auth_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Apo-protein Crystal Structure of ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Bacillus subtilis co-crystallized with ATP/Mg2+ and soaked with CoA Crystal Structure of ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Bacillus subtilis soaked with ADP-ribose Crystal Structure of ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Bacillus subtilis soaked with P1,P5-Di(adenosine-5') pentaphosphate Crystal Structure of ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Bacillus subtilis in complex with P1,P6-Di(adenosine-5') hexaphosphate Crystal Structure of ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Bacillus subtilis in complex with P1,P3-Di(adenosine-5') triphosphate Crystal Structure of ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Bacillus subtilis in complex with P1,P4-Di(adenosine-5') tetraphosphate Y RCSB Y RCSB 2011-04-27 REL REL MG MAGNESIUM ION AMP ADENOSINE MONOPHOSPHATE NPW BETA-6-HYDROXY-1,4,5,6-TETRAHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE HOH water 1KYH PDB ENTRY 1KYH PDB experimental model MG 1 2 MG MG 277 A AMP 2 3 AMP AMP 278 A NPW 3 4 NPW NPW 279 A HOH 1 5 HOH HOH 280 A HOH 2 5 HOH HOH 281 A HOH 3 5 HOH HOH 282 A HOH 4 5 HOH HOH 283 A HOH 5 5 HOH HOH 284 A HOH 6 5 HOH HOH 285 A HOH 7 5 HOH HOH 286 A HOH 8 5 HOH HOH 287 A HOH 9 5 HOH HOH 288 A HOH 10 5 HOH HOH 289 A HOH 11 5 HOH HOH 290 A HOH 12 5 HOH HOH 291 A HOH 13 5 HOH HOH 292 A HOH 14 5 HOH HOH 293 A HOH 15 5 HOH HOH 294 A HOH 16 5 HOH HOH 295 A HOH 17 5 HOH HOH 296 A HOH 18 5 HOH HOH 297 A HOH 19 5 HOH HOH 298 A HOH 20 5 HOH HOH 299 A HOH 21 5 HOH HOH 300 A HOH 22 5 HOH HOH 301 A HOH 23 5 HOH HOH 302 A HOH 24 5 HOH HOH 303 A HOH 25 5 HOH HOH 304 A HOH 26 5 HOH HOH 305 A HOH 27 5 HOH HOH 306 A HOH 28 5 HOH HOH 307 A HOH 29 5 HOH HOH 308 A HOH 30 5 HOH HOH 309 A HOH 31 5 HOH HOH 310 A HOH 32 5 HOH HOH 311 A HOH 33 5 HOH HOH 312 A HOH 34 5 HOH HOH 313 A HOH 35 5 HOH HOH 314 A HOH 36 5 HOH HOH 315 A HOH 37 5 HOH HOH 316 A HOH 38 5 HOH HOH 317 A HOH 39 5 HOH HOH 318 A HOH 40 5 HOH HOH 319 A HOH 41 5 HOH HOH 320 A HOH 42 5 HOH HOH 321 A HOH 43 5 HOH HOH 322 A HOH 44 5 HOH HOH 323 A HOH 45 5 HOH HOH 324 A HOH 46 5 HOH HOH 325 A HOH 47 5 HOH HOH 326 A HOH 48 5 HOH HOH 327 A HOH 49 5 HOH HOH 328 A HOH 50 5 HOH HOH 329 A HOH 51 5 HOH HOH 330 A HOH 52 5 HOH HOH 331 A HOH 53 5 HOH HOH 332 A HOH 54 5 HOH HOH 333 A HOH 55 5 HOH HOH 334 A HOH 56 5 HOH HOH 335 A HOH 57 5 HOH HOH 336 A HOH 58 5 HOH HOH 337 A HOH 59 5 HOH HOH 338 A HOH 60 5 HOH HOH 339 A HOH 61 5 HOH HOH 340 A HOH 62 5 HOH HOH 341 A HOH 63 5 HOH HOH 342 A HOH 64 5 HOH HOH 343 A HOH 65 5 HOH HOH 344 A HOH 66 5 HOH HOH 345 A HOH 67 5 HOH HOH 346 A HOH 68 5 HOH HOH 347 A HOH 69 5 HOH HOH 348 A HOH 70 5 HOH HOH 349 A HOH 71 5 HOH HOH 350 A HOH 72 5 HOH HOH 351 A HOH 73 5 HOH HOH 352 A HOH 74 5 HOH HOH 353 A HOH 75 5 HOH HOH 354 A HOH 76 5 HOH HOH 355 A HOH 77 5 HOH HOH 356 A HOH 78 5 HOH HOH 357 A HOH 79 5 HOH HOH 358 A HOH 80 5 HOH HOH 359 A HOH 81 5 HOH HOH 360 A HOH 82 5 HOH HOH 361 A HOH 83 5 HOH HOH 362 A HOH 84 5 HOH HOH 363 A HOH 85 5 HOH HOH 364 A HOH 86 5 HOH HOH 365 A HOH 87 5 HOH HOH 366 A HOH 88 5 HOH HOH 367 A HOH 89 5 HOH HOH 368 A HOH 90 5 HOH HOH 369 A HOH 91 5 HOH HOH 370 A HOH 92 5 HOH HOH 371 A HOH 93 5 HOH HOH 372 A HOH 94 5 HOH HOH 373 A HOH 95 5 HOH HOH 374 A HOH 96 5 HOH HOH 375 A HOH 97 5 HOH HOH 376 A HOH 98 5 HOH HOH 377 A HOH 99 5 HOH HOH 378 A HOH 100 5 HOH HOH 379 A HOH 101 5 HOH HOH 380 A HOH 102 5 HOH HOH 381 A HOH 103 5 HOH HOH 382 A HOH 104 5 HOH HOH 383 A HOH 105 5 HOH HOH 384 A HOH 106 5 HOH HOH 385 A HOH 107 5 HOH HOH 386 A HOH 108 5 HOH HOH 387 A HOH 109 5 HOH HOH 388 A HOH 110 5 HOH HOH 389 A HOH 111 5 HOH HOH 390 A HOH 112 5 HOH HOH 391 A HOH 113 5 HOH HOH 392 A HOH 114 5 HOH HOH 393 A HOH 115 5 HOH HOH 394 A HOH 116 5 HOH HOH 395 A HOH 117 5 HOH HOH 396 A HOH 118 5 HOH HOH 397 A HOH 119 5 HOH HOH 398 A HOH 120 5 HOH HOH 399 A HOH 121 5 HOH HOH 400 A HOH 122 5 HOH HOH 401 A HOH 123 5 HOH HOH 402 A HOH 124 5 HOH HOH 403 A HOH 125 5 HOH HOH 404 A HOH 126 5 HOH HOH 405 A HOH 127 5 HOH HOH 406 A HOH 128 5 HOH HOH 407 A HOH 129 5 HOH HOH 408 A HOH 130 5 HOH HOH 409 A HOH 131 5 HOH HOH 410 A HOH 132 5 HOH HOH 411 A HOH 133 5 HOH HOH 412 A HOH 134 5 HOH HOH 413 A HOH 135 5 HOH HOH 414 A HOH 136 5 HOH HOH 415 A HOH 137 5 HOH HOH 416 A HOH 138 5 HOH HOH 417 A HOH 139 5 HOH HOH 418 A HOH 140 5 HOH HOH 419 A HOH 141 5 HOH HOH 420 A HOH 142 5 HOH HOH 421 A HOH 143 5 HOH HOH 422 A HOH 144 5 HOH HOH 423 A HOH 145 5 HOH HOH 424 A HOH 146 5 HOH HOH 425 A HOH 147 5 HOH HOH 426 A HOH 148 5 HOH HOH 427 A HOH 149 5 HOH HOH 428 A HOH 150 5 HOH HOH 429 A HOH 151 5 HOH HOH 430 A HOH 152 5 HOH HOH 431 A HOH 153 5 HOH HOH 432 A HOH 154 5 HOH HOH 433 A HOH 155 5 HOH HOH 434 A HOH 156 5 HOH HOH 435 A HOH 157 5 HOH HOH 436 A HOH 158 5 HOH HOH 437 A HOH 159 5 HOH HOH 438 A HOH 160 5 HOH HOH 439 A HOH 161 5 HOH HOH 440 A HOH 162 5 HOH HOH 441 A HOH 163 5 HOH HOH 442 A HOH 164 5 HOH HOH 443 A HOH 165 5 HOH HOH 444 A HOH 166 5 HOH HOH 445 A HOH 167 5 HOH HOH 446 A HOH 168 5 HOH HOH 447 A HOH 169 5 HOH HOH 448 A HOH 170 5 HOH HOH 449 A HOH 171 5 HOH HOH 450 A HOH 172 5 HOH HOH 451 A HOH 173 5 HOH HOH 452 A HOH 174 5 HOH HOH 453 A HOH 175 5 HOH HOH 454 A HOH 176 5 HOH HOH 455 A HOH 177 5 HOH HOH 456 A HOH 178 5 HOH HOH 457 A HOH 179 5 HOH HOH 458 A HOH 180 5 HOH HOH 459 A HOH 181 5 HOH HOH 460 A HOH 182 5 HOH HOH 461 A HOH 183 5 HOH HOH 462 A HOH 184 5 HOH HOH 463 A HOH 185 5 HOH HOH 464 A HOH 186 5 HOH HOH 465 A HOH 187 5 HOH HOH 466 A HOH 188 5 HOH HOH 467 A HOH 189 5 HOH HOH 468 A HOH 190 5 HOH HOH 469 A HOH 191 5 HOH HOH 470 A HOH 192 5 HOH HOH 471 A HOH 193 5 HOH HOH 472 A HOH 194 5 HOH HOH 473 A HOH 195 5 HOH HOH 474 A HOH 196 5 HOH HOH 475 A HOH 197 5 HOH HOH 476 A HOH 198 5 HOH HOH 477 A HOH 199 5 HOH HOH 478 A HOH 200 5 HOH HOH 479 A HOH 201 5 HOH HOH 480 A HOH 202 5 HOH HOH 481 A HOH 203 5 HOH HOH 482 A HOH 204 5 HOH HOH 483 A HOH 205 5 HOH HOH 484 A HOH 206 5 HOH HOH 485 A HOH 207 5 HOH HOH 486 A HOH 208 5 HOH HOH 487 A HOH 209 5 HOH HOH 488 A HOH 210 5 HOH HOH 489 A HOH 211 5 HOH HOH 490 A HOH 212 5 HOH HOH 491 A HOH 213 5 HOH HOH 492 A HOH 214 5 HOH HOH 493 A HOH 215 5 HOH HOH 494 A HOH 216 5 HOH HOH 495 A HOH 217 5 HOH HOH 496 A HOH 218 5 HOH HOH 497 A HOH 219 5 HOH HOH 498 A HOH 220 5 HOH HOH 499 A HOH 221 5 HOH HOH 500 A HOH 222 5 HOH HOH 501 A HOH 223 5 HOH HOH 502 A HOH 224 5 HOH HOH 503 A HOH 225 5 HOH HOH 504 A HOH 226 5 HOH HOH 505 A HOH 227 5 HOH HOH 506 A HOH 228 5 HOH HOH 507 A HOH 229 5 HOH HOH 508 A HOH 230 5 HOH HOH 509 A HOH 231 5 HOH HOH 510 A HOH 232 5 HOH HOH 511 A HOH 233 5 HOH HOH 512 A HOH 234 5 HOH HOH 513 A HOH 235 5 HOH HOH 514 A HOH 236 5 HOH HOH 515 A HOH 237 5 HOH HOH 516 A HOH 238 5 HOH HOH 517 A HOH 239 5 HOH HOH 518 A HOH 240 5 HOH HOH 519 A HOH 241 5 HOH HOH 520 A HOH 242 5 HOH HOH 521 A HOH 243 5 HOH HOH 522 A HOH 244 5 HOH HOH 523 A HOH 245 5 HOH HOH 524 A HOH 246 5 HOH HOH 525 A HOH 247 5 HOH HOH 526 A HOH 248 5 HOH HOH 527 A HOH 249 5 HOH HOH 528 A HOH 250 5 HOH HOH 529 A HOH 251 5 HOH HOH 530 A HOH 252 5 HOH HOH 531 A n 1 -2 A n 2 -1 A ALA 0 n 3 ALA 0 A MET 1 n 4 MET 1 A ASN 2 n 5 ASN 2 A VAL 3 n 6 VAL 3 A PRO 4 n 7 PRO 4 A PHE 5 n 8 PHE 5 A TRP 6 n 9 TRP 6 A THR 7 n 10 THR 7 A GLU 8 n 11 GLU 8 A GLU 9 n 12 GLU 9 A HIS 10 n 13 HIS 10 A VAL 11 n 14 VAL 11 A ARG 12 n 15 ARG 12 A ALA 13 n 16 ALA 13 A THR 14 n 17 THR 14 A LEU 15 n 18 LEU 15 A PRO 16 n 19 PRO 16 A GLU 17 n 20 GLU 17 A ARG 18 n 21 ARG 18 A ASP 19 n 22 ASP 19 A ALA 20 n 23 ALA 20 A GLU 21 n 24 GLU 21 A SER 22 n 25 SER 22 A HIS 23 n 26 HIS 23 A LYS 24 n 27 LYS 24 A GLY 25 n 28 GLY 25 A THR 26 n 29 THR 26 A TYR 27 n 30 TYR 27 A GLY 28 n 31 GLY 28 A THR 29 n 32 THR 29 A ALA 30 n 33 ALA 30 A LEU 31 n 34 LEU 31 A LEU 32 n 35 LEU 32 A LEU 33 n 36 LEU 33 A ALA 34 n 37 ALA 34 A GLY 35 n 38 GLY 35 A SER 36 n 39 SER 36 A ASP 37 n 40 ASP 37 A ASP 38 n 41 ASP 38 A MET 39 n 42 MET 39 A PRO 40 n 43 PRO 40 A GLY 41 n 44 GLY 41 A ALA 42 n 45 ALA 42 A ALA 43 n 46 ALA 43 A LEU 44 n 47 LEU 44 A LEU 45 n 48 LEU 45 A ALA 46 n 49 ALA 46 A GLY 47 n 50 GLY 47 A LEU 48 n 51 LEU 48 A GLY 49 n 52 GLY 49 A ALA 50 n 53 ALA 50 A MET 51 n 54 MET 51 A ARG 52 n 55 ARG 52 A SER 53 n 56 SER 53 A GLY 54 n 57 GLY 54 A LEU 55 n 58 LEU 55 A GLY 56 n 59 GLY 56 A LYS 57 n 60 LYS 57 A LEU 58 n 61 LEU 58 A VAL 59 n 62 VAL 59 A ILE 60 n 63 ILE 60 A GLY 61 n 64 GLY 61 A THR 62 n 65 THR 62 A SER 63 n 66 SER 63 A GLU 64 n 67 GLU 64 A ASN 65 n 68 ASN 65 A VAL 66 n 69 VAL 66 A ILE 67 n 70 ILE 67 A PRO 68 n 71 PRO 68 A LEU 69 n 72 LEU 69 A ILE 70 n 73 ILE 70 A VAL 71 n 74 VAL 71 A PRO 72 n 75 PRO 72 A VAL 73 n 76 VAL 73 A LEU 74 n 77 LEU 74 A PRO 75 n 78 PRO 75 A GLU 76 n 79 GLU 76 A ALA 77 n 80 ALA 77 A THR 78 n 81 THR 78 A TYR 79 n 82 TYR 79 A TRP 80 n 83 TRP 80 A ARG 81 n 84 ARG 81 A ASP 82 n 85 ASP 82 A GLY 83 n 86 GLY 83 A TRP 84 n 87 TRP 84 A LYS 85 n 88 LYS 85 A LYS 86 n 89 LYS 86 A ALA 87 n 90 ALA 87 A ALA 88 n 91 ALA 88 A ASP 89 n 92 ASP 89 A ALA 90 n 93 ALA 90 A GLN 91 n 94 GLN 91 A LEU 92 n 95 LEU 92 A GLU 93 n 96 GLU 93 A GLU 94 n 97 GLU 94 A THR 95 n 98 THR 95 A TYR 96 n 99 TYR 96 A ARG 97 n 100 ARG 97 A ALA 98 n 101 ALA 98 A ILE 99 n 102 ILE 99 A ALA 100 n 103 ALA 100 A ILE 101 n 104 ILE 101 A GLY 102 n 105 GLY 102 A PRO 103 n 106 PRO 103 A GLY 104 n 107 GLY 104 A LEU 105 n 108 LEU 105 A PRO 106 n 109 PRO 106 A GLN 107 n 110 GLN 107 A THR 108 n 111 THR 108 A GLU 109 n 112 GLU 109 A SER 110 n 113 SER 110 A VAL 111 n 114 VAL 111 A GLN 112 n 115 GLN 112 A GLN 113 n 116 GLN 113 A ALA 114 n 117 ALA 114 A VAL 115 n 118 VAL 115 A ASP 116 n 119 ASP 116 A HIS 117 n 120 HIS 117 A VAL 118 n 121 VAL 118 A LEU 119 n 122 LEU 119 A THR 120 n 123 THR 120 A ALA 121 n 124 ALA 121 A ASP 122 n 125 ASP 122 A CYS 123 n 126 CYS 123 A PRO 124 n 127 PRO 124 A VAL 125 n 128 VAL 125 A ILE 126 n 129 ILE 126 A LEU 127 n 130 LEU 127 A ASP 128 n 131 ASP 128 A ALA 129 n 132 ALA 129 A GLY 130 n 133 GLY 130 A ALA 131 n 134 ALA 131 A LEU 132 n 135 LEU 132 A ALA 133 n 136 ALA 133 A LYS 134 n 137 LYS 134 A ARG 135 n 138 ARG 135 A THR 136 n 139 THR 136 A TYR 137 n 140 TYR 137 A PRO 138 n 141 PRO 138 A LYS 139 n 142 LYS 139 A ARG 140 n 143 ARG 140 A GLU 141 n 144 GLU 141 A GLY 142 n 145 GLY 142 A PRO 143 n 146 PRO 143 A VAL 144 n 147 VAL 144 A ILE 145 n 148 ILE 145 A LEU 146 n 149 LEU 146 A THR 147 n 150 THR 147 A PRO 148 n 151 PRO 148 A HIS 149 n 152 HIS 149 A PRO 150 n 153 PRO 150 A GLY 151 n 154 GLY 151 A GLU 152 n 155 GLU 152 A PHE 153 n 156 PHE 153 A PHE 154 n 157 PHE 154 A ARG 155 n 158 ARG 155 A MET 156 n 159 MET 156 A THR 157 n 160 THR 157 A GLY 158 n 161 GLY 158 A VAL 159 n 162 VAL 159 A PRO 160 n 163 PRO 160 A VAL 161 n 164 VAL 161 A ASN 162 n 165 ASN 162 A GLU 163 n 166 GLU 163 A LEU 164 n 167 LEU 164 A GLN 165 n 168 GLN 165 A LYS 166 n 169 LYS 166 A LYS 167 n 170 LYS 167 A ARG 168 n 171 ARG 168 A ALA 169 n 172 ALA 169 A GLU 170 n 173 GLU 170 A TYR 171 n 174 TYR 171 A ALA 172 n 175 ALA 172 A LYS 173 n 176 LYS 173 A GLU 174 n 177 GLU 174 A TRP 175 n 178 TRP 175 A ALA 176 n 179 ALA 176 A ALA 177 n 180 ALA 177 A GLN 178 n 181 GLN 178 A LEU 179 n 182 LEU 179 A GLN 180 n 183 GLN 180 A THR 181 n 184 THR 181 A VAL 182 n 185 VAL 182 A ILE 183 n 186 ILE 183 A VAL 184 n 187 VAL 184 A LEU 185 n 188 LEU 185 A LYS 186 n 189 LYS 186 A GLY 187 n 190 GLY 187 A ASN 188 n 191 ASN 188 A GLN 189 n 192 GLN 189 A THR 190 n 193 THR 190 A VAL 191 n 194 VAL 191 A ILE 192 n 195 ILE 192 A ALA 193 n 196 ALA 193 A PHE 194 n 197 PHE 194 A PRO 195 n 198 PRO 195 A ASP 196 n 199 ASP 196 A GLY 197 n 200 GLY 197 A ASP 198 n 201 ASP 198 A CYS 199 n 202 CYS 199 A TRP 200 n 203 TRP 200 A LEU 201 n 204 LEU 201 A ASN 202 n 205 ASN 202 A PRO 203 n 206 PRO 203 A THR 204 n 207 THR 204 A GLY 205 n 208 GLY 205 A ASN 206 n 209 ASN 206 A GLY 207 n 210 GLY 207 A ALA 208 n 211 ALA 208 A LEU 209 n 212 LEU 209 A ALA 210 n 213 ALA 210 A LYS 211 n 214 LYS 211 A GLY 212 n 215 GLY 212 A GLY 213 n 216 GLY 213 A THR 214 n 217 THR 214 A GLY 215 n 218 GLY 215 A ASP 216 n 219 ASP 216 A THR 217 n 220 THR 217 A LEU 218 n 221 LEU 218 A THR 219 n 222 THR 219 A GLY 220 n 223 GLY 220 A MET 221 n 224 MET 221 A ILE 222 n 225 ILE 222 A LEU 223 n 226 LEU 223 A GLY 224 n 227 GLY 224 A MET 225 n 228 MET 225 A LEU 226 n 229 LEU 226 A CYS 227 n 230 CYS 227 A CYS 228 n 231 CYS 228 A HIS 229 n 232 HIS 229 A GLU 230 n 233 GLU 230 A ASP 231 n 234 ASP 231 A PRO 232 n 235 PRO 232 A LYS 233 n 236 LYS 233 A HIS 234 n 237 HIS 234 A ALA 235 n 238 ALA 235 A VAL 236 n 239 VAL 236 A LEU 237 n 240 LEU 237 A ASN 238 n 241 ASN 238 A ALA 239 n 242 ALA 239 A VAL 240 n 243 VAL 240 A TYR 241 n 244 TYR 241 A LEU 242 n 245 LEU 242 A HIS 243 n 246 HIS 243 A GLY 244 n 247 GLY 244 A ALA 245 n 248 ALA 245 A CYS 246 n 249 CYS 246 A ALA 247 n 250 ALA 247 A GLU 248 n 251 GLU 248 A LEU 249 n 252 LEU 249 A TRP 250 n 253 TRP 250 A THR 251 n 254 THR 251 A ASP 252 n 255 ASP 252 A GLU 253 n 256 GLU 253 A HIS 254 n 257 HIS 254 A SER 255 n 258 SER 255 A ALA 256 n 259 ALA 256 A HIS 257 n 260 HIS 257 A THR 258 n 261 THR 258 A LEU 259 n 262 LEU 259 A LEU 260 n 263 LEU 260 A ALA 261 n 264 ALA 261 A HIS 262 n 265 HIS 262 A GLU 263 n 266 GLU 263 A LEU 264 n 267 LEU 264 A SER 265 n 268 SER 265 A ASP 266 n 269 ASP 266 A ILE 267 n 270 ILE 267 A LEU 268 n 271 LEU 268 A PRO 269 n 272 PRO 269 A ARG 270 n 273 ARG 270 A VAL 271 n 274 VAL 271 A TRP 272 n 275 TRP 272 A LYS 273 n 276 LYS 273 A ARG 274 n 277 ARG 274 A PHE 275 n 278 PHE 275 A GLU 276 n 279 GLU 276 A 0.4311 -0.0771 0.0549 0.6430 0.0316 0.3643 -0.0286 0.0157 -0.0967 -0.0005 -0.0206 0.0170 0.0713 -0.0110 0.0492 0.0505 -0.0029 0.0281 0.0185 -0.0095 0.0339 refined -0.3080 -24.6490 -23.7270 X-RAY DIFFRACTION A 0 A 276 X-RAY DIFFRACTION 1 author_and_software_defined_assembly PISA 4 tetrameric 15710 -96 36510 A AMP 278 C O3P AMP 1_555 A MG 277 B MG MG 1_555 A HOH 297 E O HOH 1_555 112.1 A AMP 278 C O3P AMP 1_555 A MG 277 B MG MG 1_555 A HOH 303 E O HOH 1_555 93.5 A HOH 297 E O HOH 1_555 A MG 277 B MG MG 1_555 A HOH 303 E O HOH 1_555 91.7 A AMP 278 C O3P AMP 1_555 A MG 277 B MG MG 1_555 A HOH 306 E O HOH 1_555 123.7 A HOH 297 E O HOH 1_555 A MG 277 B MG MG 1_555 A HOH 306 E O HOH 1_555 124.1 A HOH 303 E O HOH 1_555 A MG 277 B MG MG 1_555 A HOH 306 E O HOH 1_555 87.7 A AMP 278 C O3P AMP 1_555 A MG 277 B MG MG 1_555 A HOH 322 E O HOH 1_555 88.2 A HOH 297 E O HOH 1_555 A MG 277 B MG MG 1_555 A HOH 322 E O HOH 1_555 88.8 A HOH 303 E O HOH 1_555 A MG 277 B MG MG 1_555 A HOH 322 E O HOH 1_555 177.9 A HOH 306 E O HOH 1_555 A MG 277 B MG MG 1_555 A HOH 322 E O HOH 1_555 90.3 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_555 -x,-y,z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 3_555 -y,x,z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 4_555 y,-x,z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 A O THR 78 A O THR 81 A N ILE 60 A N ILE 63 A O GLY 61 A O GLY 64 A N LEU 32 A N LEU 35 A N LEU 33 A N LEU 36 A O ALA 100 A O ALA 103 A N ILE 99 A N ILE 102 A O ILE 126 A O ILE 129 A N VAL 125 A N VAL 128 A O ILE 145 A O ILE 148 A N VAL 144 A N VAL 147 A O VAL 182 A O VAL 185 A N ILE 183 A N ILE 186 A O ALA 193 A O ALA 196 A N ILE 192 A N ILE 195 A O TRP 200 A O TRP 203 1 A HOH 363 E HOH 1 A HOH 370 E HOH 1 A HOH 456 E HOH 1 A SER -2 A SER 1 1 Y 1 A ASN -1 A ASN 2 1 Y 1 A GLU 21 -103.91 65.25 1 A ASP 122 -102.80 78.64 1 A ALA 129 55.60 -121.57 1 A LYS 167 -145.78 52.78 57.39 21.147 11.13 -0.380 0.000 0.000 -0.380 0.000 0.750 0.976 0.975 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS, refinement counts Friedel's pair. U VALUES RESIDUAL ONLY 0.148 0.134 0.135 1.510 50.000 2895 57159 5.100 99.960 1.00 0.25 1.246 0.025 RANDOM 1 THROUGHOUT 0.00 MOLECULAR REPLACEMENT 0.048 0.800 0.800 1.200 PDB ENTRY 1KYH MAXIMUM LIKELIHOOD BABINET MODEL WITH MASK 1.510 50.000 252 2432 73 0 2107 0.019 0.022 2285 0.000 0.020 1497 2.155 2.006 3142 4.240 3.000 3681 6.295 5.000 290 37.294 24.409 93 11.897 15.000 356 16.150 15.000 12 0.111 0.200 354 0.010 0.021 2526 0.011 0.020 429 1.043 1.500 1398 0.000 1.500 568 1.890 2.000 2250 2.948 3.000 887 4.713 4.500 885 0.157 0.144 1.549 221 3943 4164 20 99.860 17.3 1.51 50.00 3RPZ 57168 0 -3 0.086 0.086 1 25.913 7.6 100.0 refinement Garib N. Murshudov garib@ysbl.york.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/refmac5.html REFMAC program 5.5.0109 data extraction PDB help@deposit.rcsb.org June 11, 2008 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.006 data collection HKL-3000 data reduction HKL-3000 data scaling HKL-3000 phasing HKL-3000 MOLREP Crystal Structure of ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Bacillus subtilis co-crystallized with ATP/Mg2+ and soaked with NADPH 1 N N 2 N N 3 N N 4 N N 5 N N A THR 7 A THR 10 HELX_P A LEU 15 A LEU 18 1 1 9 A HIS 23 A HIS 26 HELX_P A TYR 27 A TYR 30 5 2 5 A PRO 40 A PRO 43 HELX_P A ARG 52 A ARG 55 1 3 13 A VAL 66 A VAL 69 HELX_P A VAL 71 A VAL 74 1 4 6 A ASP 82 A ASP 85 HELX_P A ALA 87 A ALA 90 1 5 6 A THR 108 A THR 111 HELX_P A LEU 119 A LEU 122 1 6 12 A ALA 129 A ALA 132 HELX_P A LEU 132 A LEU 135 5 7 4 A HIS 149 A HIS 152 HELX_P A GLY 158 A GLY 161 1 8 10 A PRO 160 A PRO 163 HELX_P A GLN 165 A GLN 168 1 9 6 A LYS 167 A LYS 170 HELX_P A GLN 180 A GLN 183 1 10 14 A ASN 206 A ASN 209 HELX_P A ALA 210 A ALA 213 5 11 5 A GLY 213 A GLY 216 HELX_P A HIS 229 A HIS 232 1 12 17 A ASP 231 A ASP 234 HELX_P A HIS 254 A HIS 257 1 13 24 A LEU 260 A LEU 263 HELX_P A PHE 275 A PHE 278 1 14 16 metalc 1.972 A MG 277 B MG MG 1_555 A AMP 278 C O3P AMP 1_555 metalc 2.057 A MG 277 B MG MG 1_555 A HOH 297 E O HOH 1_555 metalc 2.025 A MG 277 B MG MG 1_555 A HOH 303 E O HOH 1_555 metalc 1.983 A MG 277 B MG MG 1_555 A HOH 306 E O HOH 1_555 metalc 2.045 A MG 277 B MG MG 1_555 A HOH 322 E O HOH 1_555 lyase/lyase substrate STRUCTURAL GENOMICS, PSI-biology, PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, LYASE, lyase-lyase substrate complex YXKO_BACSU UNP 1 1 P94368 MNVPFWTEEHVRATLPERDAESHKGTYGTALLLAGSDDMPGAALLAGLGAMRSGLGKLVIGTSENVIPLIVPVLPEATYW RDGWKKAADAQLEETYRAIAIGPGLPQTESVQQAVDHVLTADCPVILDAGALAKRTYPKREGPVILTPHPGEFFRMTGVP VNELQKKRAEYAKEWAAQLQTVIVLKGNQTVIAFPDGDCWLNPTGNGALAKGGTGDTLTGMILGMLCCHEDPKHAVLNAV YLHGACAELWTDEHSAHTLLAHELSDILPRVWKRFE 1 276 3RPZ 1 276 P94368 A 1 4 279 1 expression tag SER -2 3RPZ A P94368 UNP 1 1 expression tag ASN -1 3RPZ A P94368 UNP 2 1 expression tag ALA 0 3RPZ A P94368 UNP 3 9 parallel parallel parallel parallel parallel parallel anti-parallel anti-parallel A THR 78 A THR 81 A ARG 81 A ARG 84 A LYS 57 A LYS 60 A THR 62 A THR 65 A THR 29 A THR 32 A LEU 33 A LEU 36 A ALA 98 A ALA 101 A ILE 101 A ILE 104 A VAL 125 A VAL 128 A LEU 127 A LEU 130 A VAL 144 A VAL 147 A LEU 146 A LEU 149 A VAL 182 A VAL 185 A LEU 185 A LEU 188 A VAL 191 A VAL 194 A ALA 193 A ALA 196 A CYS 199 A CYS 202 A LEU 201 A LEU 204 BINDING SITE FOR RESIDUE MG A 277 A MG 277 Software 6 BINDING SITE FOR RESIDUE AMP A 278 A AMP 278 Software 24 BINDING SITE FOR RESIDUE NPW A 279 A NPW 279 Software 35 A LYS 186 A LYS 189 6 1_555 A AMP 278 C AMP 6 1_555 A HOH 297 E HOH 6 1_555 A HOH 303 E HOH 6 1_555 A HOH 306 E HOH 6 1_555 A HOH 322 E HOH 6 1_555 A ALA 20 A ALA 23 24 3_555 A SER 22 A SER 25 24 3_555 A LYS 24 A LYS 27 24 3_555 A HIS 149 A HIS 152 24 1_555 A LYS 186 A LYS 189 24 1_555 A GLY 187 A GLY 190 24 1_555 A THR 190 A THR 193 24 1_555 A ASN 206 A ASN 209 24 1_555 A GLY 207 A GLY 210 24 1_555 A LEU 209 A LEU 212 24 1_555 A ALA 210 A ALA 213 24 1_555 A THR 214 A THR 217 24 1_555 A GLY 215 A GLY 218 24 1_555 A LEU 218 A LEU 221 24 1_555 A HIS 243 A HIS 246 24 1_555 A MG 277 B MG 24 1_555 A HOH 285 E HOH 24 1_555 A HOH 295 E HOH 24 1_555 A HOH 303 E HOH 24 1_555 A HOH 317 E HOH 24 1_555 A HOH 322 E HOH 24 1_555 A HOH 340 E HOH 24 1_555 A HOH 345 E HOH 24 1_555 A HOH 388 E HOH 24 1_555 A HIS 23 A HIS 26 35 3_555 A LYS 24 A LYS 27 35 3_555 A GLY 25 A GLY 28 35 3_555 A MET 39 A MET 42 35 1_555 A ALA 42 A ALA 45 35 1_555 A LYS 57 A LYS 60 35 3_555 A PRO 75 A PRO 78 35 3_555 A GLU 76 A GLU 79 35 3_555 A ALA 77 A ALA 80 35 3_555 A THR 78 A THR 81 35 3_555 A PRO 103 A PRO 106 35 1_555 A GLY 104 A GLY 107 35 1_555 A ALA 129 A ALA 132 35 1_555 A HIS 149 A HIS 152 35 1_555 A PRO 150 A PRO 153 35 1_555 A GLY 151 A GLY 154 35 1_555 A VAL 161 A VAL 164 35 1_555 A GLY 213 A GLY 216 35 1_555 A ASP 216 A ASP 219 35 1_555 A HOH 280 E HOH 35 1_555 A HOH 291 E HOH 35 1_555 A HOH 301 E HOH 35 1_555 A HOH 306 E HOH 35 1_555 A HOH 317 E HOH 35 1_555 A HOH 322 E HOH 35 1_555 A HOH 323 E HOH 35 1_555 A HOH 365 E HOH 35 1_555 A HOH 388 E HOH 35 1_555 A HOH 424 E HOH 35 1_555 A HOH 438 E HOH 35 1_555 A HOH 439 E HOH 35 1_555 A HOH 444 E HOH 35 1_555 A HOH 446 E HOH 35 1_555 A HOH 508 E HOH 35 1_555 A HOH 512 E HOH 35 1_555 97 I 4 2 2