0.008939
0.005161
0.000000
0.000000
0.010322
0.000000
0.000000
0.000000
0.005206
0.00000
0.00000
0.00000
DuBois, R.M.
Zaraket, H.
Reddivari, M.
Heath, R.J.
White, S.W.
Russell, C.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
111.867
111.867
192.090
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Plos Pathog.
1553-7366
7
e1002398
e1002398
10.1371/journal.ppat.1002398
22144894
Acid stability of the hemagglutinin protein regulates H5N1 influenza virus pathogenicity.
2011
100
1
CCD
2010-02-15
MAR CCD
SINGLE WAVELENGTH
M
x-ray
1
1.0000
1.0
22-ID
APS
1.0000
SYNCHROTRON
APS BEAMLINE 22-ID
37782.715
Hemagglutinin HA1 chain
1
man
polymer
20937.143
Hemagglutinin HA2 chain
1
man
polymer
424.401
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1
man
branched
96.063
SULFATE ION
2
syn
non-polymer
18.015
water
16
nat
water
no
no
DLGSMADPGYLLEDQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLDGVKPLILRDCSVAGWLLGNPMC
DEFINVPEWSYIVEKASPANDLCYPGDFNDYEELKHLLSRINHFEKIQIIPKSSWSNHEASSGVSSACPYLGKSSFFRNV
VWLIKKNSAYPTIKRSYNNTNQEDLLVLWGIHHPNDAAEQTKLYQNPTTYISVGTSTLNQRLVPKIATRSKVNGQSGRME
FFWTILKPNDAINFESNGNFIAPEYAYKIVKKGDSAIMKSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVK
SNRLVLATGLRNTPQR
DLGSMADPGYLLEDQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLDGVKPLILRDCSVAGWLLGNPMC
DEFINVPEWSYIVEKASPANDLCYPGDFNDYEELKHLLSRINHFEKIQIIPKSSWSNHEASSGVSSACPYLGKSSFFRNV
VWLIKKNSAYPTIKRSYNNTNQEDLLVLWGIHHPNDAAEQTKLYQNPTTYISVGTSTLNQRLVPKIATRSKVNGQSGRME
FFWTILKPNDAINFESNGNFIAPEYAYKIVKKGDSAIMKSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVK
SNRLVLATGLRNTPQR
A
polypeptide(L)
no
no
GLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENL
NKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVKNGTYDYP
QYSEEARLNREEISGVRSLVPR
GLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENL
NKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVKNGTYDYP
QYSEEARLNREEISGVRSLVPR
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
A/Chicken/Hong Kong/YU562/2001 (H5N1)
fall armyworm
sample
HA
196426
Influenza A virus
7108
Spodoptera frugiperda
Sf9
baculovirus
pAcGP67B
A/Chicken/Hong Kong/YU562/2001 (H5N1)
fall armyworm
sample
HA
196426
Influenza A virus
7108
Spodoptera frugiperda
Sf9
baculovirus
pAcGP67B
1
5.91
79.18
VAPOR DIFFUSION, HANGING DROP
6.6
1.62M ammonium sulfate, 0.1M sodium cacodylate pH 6.6, VAPOR DIFFUSION, HANGING DROP, temperature 291K
291
atom_site
chem_comp
entity
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
struct_asym
struct_conn
struct_ref_seq_dif
struct_site
struct_site_gen
repository
Initial release
Carbohydrate remediation
repository
Remediation
Database references
Atomic model
Data collection
Database references
Derived calculations
Structure summary
1
0
2011-12-14
1
1
2012-03-28
2
0
2020-07-29
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.type_symbol
_chem_comp.name
_chem_comp.type
_entity.formula_weight
_entity.pdbx_description
_entity.pdbx_number_of_molecules
_entity.src_method
_entity.type
_pdbx_struct_assembly_gen.asym_id_list
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_role
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_ref_seq_dif.details
D
NAG
1
n
C
NAG
1
D
NAG
2
n
C
NAG
2
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
RCSB
Y
RCSB
2011-05-14
REL
REL
oligosaccharide
DGlcpNAcb1-4DGlcpNAcb1-
3
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1
3
PDB2Glycan
1.1.0
WURCS
[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}
3
PDB-CARE
LINUCS
C1
O4
NAG
NAG
2
1
3
O1
HO4
sing
n
n
SO4
SULFATE ION
HOH
water
SO4
1
4
SO4
SO4
327
A
SO4
2
4
SO4
SO4
328
A
HOH
1
5
HOH
HOH
331
A
HOH
2
5
HOH
HOH
332
A
HOH
3
5
HOH
HOH
333
A
HOH
5
5
HOH
HOH
334
A
HOH
6
5
HOH
HOH
335
A
HOH
7
5
HOH
HOH
336
A
HOH
8
5
HOH
HOH
337
A
HOH
10
5
HOH
HOH
338
A
HOH
11
5
HOH
HOH
339
A
HOH
12
5
HOH
HOH
340
A
HOH
13
5
HOH
HOH
341
A
HOH
14
5
HOH
HOH
342
A
HOH
15
5
HOH
HOH
343
A
HOH
16
5
HOH
HOH
344
A
HOH
4
5
HOH
HOH
183
B
HOH
9
5
HOH
HOH
184
B
44.370
2.960
2.960
48.440
48.440
Phaser MODE: MR_AUTO
n
1
-2
A
n
2
-1
A
n
3
0
A
n
4
1
A
n
5
2
A
n
6
3
A
n
7
4
A
n
8
5
A
n
9
6
A
n
10
7
A
n
11
8
A
n
12
9
A
n
13
10
A
n
14
11
A
n
15
12
A
n
16
13
A
n
17
14
A
n
18
15
A
n
19
16
A
n
20
17
A
n
21
18
A
n
22
19
A
n
23
20
A
n
24
21
A
n
25
22
A
n
26
23
A
n
27
24
A
n
28
25
A
n
29
26
A
n
30
27
A
n
31
28
A
n
32
29
A
n
33
30
A
n
34
31
A
n
35
32
A
n
36
33
A
n
37
34
A
n
38
35
A
n
39
36
A
n
40
37
A
n
41
38
A
n
42
39
A
n
43
40
A
n
44
41
A
n
45
42
A
LEU
43
n
46
LEU
43
A
GLU
44
n
47
GLU
44
A
LYS
45
n
48
LYS
45
A
THR
46
n
49
THR
46
A
HIS
47
n
50
HIS
47
A
ASN
48
n
51
ASN
48
A
GLY
49
n
52
GLY
49
A
LYS
50
n
53
LYS
50
A
LEU
51
n
54
LEU
51
A
CYS
52
n
55
CYS
52
A
ASP
53
n
56
ASP
53
A
LEU
53
n
57
A
LEU
53
A
ASP
54
n
58
ASP
54
A
GLY
55
n
59
GLY
55
A
VAL
56
n
60
VAL
56
A
LYS
57
n
61
LYS
57
A
PRO
58
n
62
PRO
58
A
LEU
59
n
63
LEU
59
A
ILE
60
n
64
ILE
60
A
LEU
61
n
65
LEU
61
A
ARG
62
n
66
ARG
62
A
ASP
63
n
67
ASP
63
A
CYS
64
n
68
CYS
64
A
SER
65
n
69
SER
65
A
VAL
66
n
70
VAL
66
A
ALA
67
n
71
ALA
67
A
GLY
68
n
72
GLY
68
A
TRP
69
n
73
TRP
69
A
LEU
70
n
74
LEU
70
A
LEU
71
n
75
LEU
71
A
GLY
72
n
76
GLY
72
A
ASN
73
n
77
ASN
73
A
PRO
74
n
78
PRO
74
A
MET
75
n
79
MET
75
A
CYS
76
n
80
CYS
76
A
ASP
77
n
81
ASP
77
A
GLU
78
n
82
GLU
78
A
PHE
79
n
83
PHE
79
A
ILE
80
n
84
ILE
80
A
ASN
81
n
85
ASN
81
A
VAL
82
n
86
VAL
82
A
PRO
82
n
87
A
PRO
82
A
GLU
83
n
88
GLU
83
A
TRP
84
n
89
TRP
84
A
SER
85
n
90
SER
85
A
TYR
86
n
91
TYR
86
A
ILE
87
n
92
ILE
87
A
VAL
88
n
93
VAL
88
A
GLU
89
n
94
GLU
89
A
LYS
90
n
95
LYS
90
A
ALA
91
n
96
ALA
91
A
SER
92
n
97
SER
92
A
PRO
93
n
98
PRO
93
A
ALA
94
n
99
ALA
94
A
ASN
95
n
100
ASN
95
A
ASP
96
n
101
ASP
96
A
LEU
96
n
102
A
LEU
96
A
CYS
97
n
103
CYS
97
A
TYR
98
n
104
TYR
98
A
PRO
99
n
105
PRO
99
A
GLY
100
n
106
GLY
100
A
ASP
101
n
107
ASP
101
A
PHE
102
n
108
PHE
102
A
ASN
103
n
109
ASN
103
A
ASP
104
n
110
ASP
104
A
TYR
105
n
111
TYR
105
A
GLU
106
n
112
GLU
106
A
GLU
107
n
113
GLU
107
A
LEU
108
n
114
LEU
108
A
LYS
109
n
115
LYS
109
A
HIS
110
n
116
HIS
110
A
LEU
111
n
117
LEU
111
A
LEU
112
n
118
LEU
112
A
SER
113
n
119
SER
113
A
ARG
114
n
120
ARG
114
A
ILE
115
n
121
ILE
115
A
ASN
116
n
122
ASN
116
A
HIS
117
n
123
HIS
117
A
PHE
118
n
124
PHE
118
A
GLU
119
n
125
GLU
119
A
LYS
120
n
126
LYS
120
A
ILE
121
n
127
ILE
121
A
GLN
122
n
128
GLN
122
A
ILE
123
n
129
ILE
123
A
ILE
124
n
130
ILE
124
A
PRO
125
n
131
PRO
125
A
LYS
125
n
132
A
LYS
125
A
SER
125
n
133
B
SER
125
A
SER
126
n
134
SER
126
A
TRP
127
n
135
TRP
127
A
SER
128
n
136
SER
128
A
ASN
129
n
137
ASN
129
A
HIS
130
n
138
HIS
130
A
GLU
131
n
139
GLU
131
A
ALA
132
n
140
ALA
132
A
SER
133
n
141
SER
133
A
SER
133
n
142
A
SER
133
A
GLY
134
n
143
GLY
134
A
VAL
135
n
144
VAL
135
A
SER
136
n
145
SER
136
A
SER
137
n
146
SER
137
A
ALA
138
n
147
ALA
138
A
CYS
139
n
148
CYS
139
A
PRO
140
n
149
PRO
140
A
TYR
141
n
150
TYR
141
A
LEU
142
n
151
LEU
142
A
GLY
143
n
152
GLY
143
A
LYS
144
n
153
LYS
144
A
SER
145
n
154
SER
145
A
SER
146
n
155
SER
146
A
PHE
147
n
156
PHE
147
A
PHE
148
n
157
PHE
148
A
ARG
149
n
158
ARG
149
A
ASN
150
n
159
ASN
150
A
VAL
151
n
160
VAL
151
A
VAL
152
n
161
VAL
152
A
TRP
153
n
162
TRP
153
A
LEU
154
n
163
LEU
154
A
ILE
155
n
164
ILE
155
A
LYS
156
n
165
LYS
156
A
LYS
157
n
166
LYS
157
A
ASN
158
n
167
ASN
158
A
SER
159
n
168
SER
159
A
ALA
160
n
169
ALA
160
A
TYR
161
n
170
TYR
161
A
PRO
162
n
171
PRO
162
A
THR
163
n
172
THR
163
A
ILE
164
n
173
ILE
164
A
LYS
165
n
174
LYS
165
A
ARG
166
n
175
ARG
166
A
SER
167
n
176
SER
167
A
TYR
168
n
177
TYR
168
A
ASN
169
n
178
ASN
169
A
ASN
170
n
179
ASN
170
A
THR
171
n
180
THR
171
A
ASN
172
n
181
ASN
172
A
GLN
173
n
182
GLN
173
A
GLU
174
n
183
GLU
174
A
ASP
175
n
184
ASP
175
A
LEU
176
n
185
LEU
176
A
LEU
177
n
186
LEU
177
A
VAL
178
n
187
VAL
178
A
LEU
179
n
188
LEU
179
A
TRP
180
n
189
TRP
180
A
GLY
181
n
190
GLY
181
A
ILE
182
n
191
ILE
182
A
HIS
183
n
192
HIS
183
A
HIS
184
n
193
HIS
184
A
PRO
185
n
194
PRO
185
A
ASN
186
n
195
ASN
186
A
ASP
187
n
196
ASP
187
A
ALA
188
n
197
ALA
188
A
ALA
189
n
198
ALA
189
A
GLU
190
n
199
GLU
190
A
GLN
191
n
200
GLN
191
A
THR
192
n
201
THR
192
A
LYS
193
n
202
LYS
193
A
LEU
194
n
203
LEU
194
A
TYR
195
n
204
TYR
195
A
GLN
196
n
205
GLN
196
A
ASN
197
n
206
ASN
197
A
PRO
198
n
207
PRO
198
A
THR
199
n
208
THR
199
A
THR
200
n
209
THR
200
A
TYR
201
n
210
TYR
201
A
ILE
202
n
211
ILE
202
A
SER
203
n
212
SER
203
A
VAL
204
n
213
VAL
204
A
GLY
205
n
214
GLY
205
A
THR
206
n
215
THR
206
A
SER
207
n
216
SER
207
A
THR
208
n
217
THR
208
A
LEU
209
n
218
LEU
209
A
ASN
210
n
219
ASN
210
A
GLN
211
n
220
GLN
211
A
ARG
212
n
221
ARG
212
A
LEU
213
n
222
LEU
213
A
VAL
214
n
223
VAL
214
A
PRO
215
n
224
PRO
215
A
LYS
216
n
225
LYS
216
A
ILE
217
n
226
ILE
217
A
ALA
218
n
227
ALA
218
A
THR
219
n
228
THR
219
A
ARG
220
n
229
ARG
220
A
SER
221
n
230
SER
221
A
LYS
222
n
231
LYS
222
A
VAL
223
n
232
VAL
223
A
ASN
224
n
233
ASN
224
A
GLY
225
n
234
GLY
225
A
GLN
226
n
235
GLN
226
A
SER
227
n
236
SER
227
A
GLY
228
n
237
GLY
228
A
ARG
229
n
238
ARG
229
A
MET
230
n
239
MET
230
A
GLU
231
n
240
GLU
231
A
PHE
232
n
241
PHE
232
A
PHE
233
n
242
PHE
233
A
TRP
234
n
243
TRP
234
A
THR
235
n
244
THR
235
A
ILE
236
n
245
ILE
236
A
LEU
237
n
246
LEU
237
A
LYS
238
n
247
LYS
238
A
PRO
239
n
248
PRO
239
A
ASN
240
n
249
ASN
240
A
ASP
241
n
250
ASP
241
A
ALA
242
n
251
ALA
242
A
ILE
243
n
252
ILE
243
A
ASN
244
n
253
ASN
244
A
PHE
245
n
254
PHE
245
A
GLU
246
n
255
GLU
246
A
SER
247
n
256
SER
247
A
ASN
248
n
257
ASN
248
A
GLY
249
n
258
GLY
249
A
ASN
250
n
259
ASN
250
A
PHE
251
n
260
PHE
251
A
ILE
252
n
261
ILE
252
A
ALA
253
n
262
ALA
253
A
PRO
254
n
263
PRO
254
A
GLU
255
n
264
GLU
255
A
TYR
256
n
265
TYR
256
A
ALA
257
n
266
ALA
257
A
TYR
258
n
267
TYR
258
A
LYS
259
n
268
LYS
259
A
ILE
260
n
269
ILE
260
A
VAL
261
n
270
VAL
261
A
LYS
262
n
271
LYS
262
A
LYS
263
n
272
LYS
263
A
GLY
264
n
273
GLY
264
A
ASP
264
n
274
A
ASP
264
A
SER
265
n
275
SER
265
A
ALA
266
n
276
ALA
266
A
ILE
267
n
277
ILE
267
A
MET
268
n
278
MET
268
A
LYS
269
n
279
LYS
269
A
SER
270
n
280
SER
270
A
GLU
271
n
281
GLU
271
A
LEU
272
n
282
LEU
272
A
GLU
273
n
283
GLU
273
A
TYR
274
n
284
TYR
274
A
GLY
275
n
285
GLY
275
A
ASN
276
n
286
ASN
276
A
CYS
277
n
287
CYS
277
A
ASN
278
n
288
ASN
278
A
THR
279
n
289
THR
279
A
LYS
280
n
290
LYS
280
A
CYS
281
n
291
CYS
281
A
GLN
282
n
292
GLN
282
A
THR
283
n
293
THR
283
A
PRO
284
n
294
PRO
284
A
MET
285
n
295
MET
285
A
GLY
286
n
296
GLY
286
A
ALA
287
n
297
ALA
287
A
ILE
288
n
298
ILE
288
A
ASN
289
n
299
ASN
289
A
SER
290
n
300
SER
290
A
SER
291
n
301
SER
291
A
MET
292
n
302
MET
292
A
PRO
293
n
303
PRO
293
A
PHE
294
n
304
PHE
294
A
HIS
295
n
305
HIS
295
A
ASN
296
n
306
ASN
296
A
ILE
297
n
307
ILE
297
A
HIS
298
n
308
HIS
298
A
PRO
299
n
309
PRO
299
A
LEU
300
n
310
LEU
300
A
THR
301
n
311
THR
301
A
ILE
302
n
312
ILE
302
A
GLY
303
n
313
GLY
303
A
GLU
304
n
314
GLU
304
A
CYS
305
n
315
CYS
305
A
PRO
306
n
316
PRO
306
A
LYS
307
n
317
LYS
307
A
TYR
308
n
318
TYR
308
A
VAL
309
n
319
VAL
309
A
LYS
310
n
320
LYS
310
A
SER
311
n
321
SER
311
A
ASN
312
n
322
ASN
312
A
n
323
313
A
n
324
314
A
n
325
315
A
n
326
316
A
n
327
317
A
n
328
318
A
n
329
319
A
n
330
320
A
n
331
321
A
n
332
322
A
n
333
323
A
n
334
324
A
n
335
325
A
n
336
326
A
n
1
1
B
n
2
2
B
n
3
3
B
n
4
4
B
n
5
5
B
n
6
6
B
n
7
7
B
n
8
8
B
n
9
9
B
n
10
10
B
n
11
11
B
n
12
12
B
n
13
13
B
n
14
14
B
n
15
15
B
n
16
16
B
n
17
17
B
n
18
18
B
n
19
19
B
n
20
20
B
n
21
21
B
n
22
22
B
n
23
23
B
n
24
24
B
n
25
25
B
n
26
26
B
n
27
27
B
n
28
28
B
n
29
29
B
n
30
30
B
n
31
31
B
n
32
32
B
n
33
33
B
n
34
34
B
n
35
35
B
n
36
36
B
n
37
37
B
n
38
38
B
n
39
39
B
n
40
40
B
n
41
41
B
n
42
42
B
n
43
43
B
n
44
44
B
n
45
45
B
n
46
46
B
n
47
47
B
n
48
48
B
n
49
49
B
n
50
50
B
n
51
51
B
n
52
52
B
n
53
53
B
n
54
54
B
n
55
55
B
n
56
56
B
n
57
57
B
n
58
58
B
MET
59
n
59
MET
59
B
ASN
60
n
60
ASN
60
B
THR
61
n
61
THR
61
B
GLN
62
n
62
GLN
62
B
PHE
63
n
63
PHE
63
B
GLU
64
n
64
GLU
64
B
ALA
65
n
65
ALA
65
B
VAL
66
n
66
VAL
66
B
GLY
67
n
67
GLY
67
B
ARG
68
n
68
ARG
68
B
GLU
69
n
69
GLU
69
B
PHE
70
n
70
PHE
70
B
ASN
71
n
71
ASN
71
B
ASN
72
n
72
ASN
72
B
LEU
73
n
73
LEU
73
B
GLU
74
n
74
GLU
74
B
ARG
75
n
75
ARG
75
B
ARG
76
n
76
ARG
76
B
ILE
77
n
77
ILE
77
B
GLU
78
n
78
GLU
78
B
ASN
79
n
79
ASN
79
B
LEU
80
n
80
LEU
80
B
ASN
81
n
81
ASN
81
B
LYS
82
n
82
LYS
82
B
LYS
83
n
83
LYS
83
B
MET
84
n
84
MET
84
B
GLU
85
n
85
GLU
85
B
ASP
86
n
86
ASP
86
B
GLY
87
n
87
GLY
87
B
PHE
88
n
88
PHE
88
B
LEU
89
n
89
LEU
89
B
ASP
90
n
90
ASP
90
B
VAL
91
n
91
VAL
91
B
TRP
92
n
92
TRP
92
B
THR
93
n
93
THR
93
B
TYR
94
n
94
TYR
94
B
ASN
95
n
95
ASN
95
B
ALA
96
n
96
ALA
96
B
GLU
97
n
97
GLU
97
B
LEU
98
n
98
LEU
98
B
LEU
99
n
99
LEU
99
B
VAL
100
n
100
VAL
100
B
LEU
101
n
101
LEU
101
B
n
102
102
B
n
103
103
B
n
104
104
B
n
105
105
B
n
106
106
B
n
107
107
B
n
108
108
B
n
109
109
B
n
110
110
B
n
111
111
B
n
112
112
B
n
113
113
B
n
114
114
B
n
115
115
B
n
116
116
B
n
117
117
B
n
118
118
B
n
119
119
B
n
120
120
B
n
121
121
B
n
122
122
B
n
123
123
B
n
124
124
B
n
125
125
B
n
126
126
B
n
127
127
B
n
128
128
B
n
129
129
B
n
130
130
B
n
131
131
B
n
132
132
B
n
133
133
B
n
134
134
B
n
135
135
B
n
136
136
B
n
137
137
B
n
138
138
B
n
139
139
B
n
140
140
B
n
141
141
B
n
142
142
B
n
143
143
B
n
144
144
B
n
145
145
B
n
146
146
B
n
147
147
B
n
148
148
B
n
149
149
B
n
150
150
B
n
151
151
B
n
152
152
B
n
153
153
B
n
154
154
B
n
155
155
B
n
156
156
B
n
157
157
B
n
158
158
B
n
159
159
B
n
160
160
B
n
161
161
B
n
162
162
B
n
163
163
B
n
164
164
B
n
165
165
B
n
166
166
B
n
167
167
B
n
168
168
B
n
169
169
B
n
170
170
B
n
171
171
B
n
172
172
B
n
173
173
B
n
174
174
B
n
175
175
B
n
176
176
B
n
177
177
B
n
178
178
B
n
179
179
B
n
180
180
B
n
181
181
B
n
182
182
B
author_and_software_defined_assembly
PISA
6
hexameric
14810
-102
40730
A
ASN
169
GLYCOSYLATION SITE
A
ASN
178
ASN
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_565
-y,x-y+1,z
crystal symmetry operation
-55.9335000000
96.8796638452
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
3_455
-x+y-1,-x,z
crystal symmetry operation
-111.8670000000
0.0000000000
0.0000000000
A
N
LEU
51
A
N
LEU
54
A
O
GLY
275
A
O
GLY
285
A
N
LEU
59
A
N
LEU
63
A
O
VAL
88
A
O
VAL
93
A
N
ILE
87
A
N
ILE
92
A
O
MET
268
A
O
MET
278
A
N
ASP
101
A
N
ASP
107
A
O
PHE
232
A
O
PHE
241
A
O
LEU
237
A
O
LEU
246
A
N
LEU
176
A
N
LEU
185
A
N
LEU
177
A
N
LEU
186
A
O
TYR
258
A
O
TYR
267
A
O
LYS
262
A
O
LYS
271
A
N
ASN
116
A
N
ASN
122
A
N
ASP
101
A
N
ASP
107
A
O
PHE
232
A
O
PHE
241
A
O
LEU
237
A
O
LEU
246
A
N
LEU
176
A
N
LEU
185
A
N
GLY
181
A
N
GLY
190
A
O
ILE
252
A
O
ILE
261
A
O
ALA
253
A
O
ALA
262
A
N
VAL
152
A
N
VAL
161
A
N
SER
136
A
N
SER
145
A
O
SER
146
A
O
SER
155
A
N
ILE
164
A
N
ILE
173
A
O
SER
247
A
O
SER
256
A
O
GLU
246
A
O
GLU
255
A
N
SER
203
A
N
SER
212
A
N
ILE
202
A
N
ILE
211
A
O
LEU
213
A
O
LEU
222
A
N
GLN
282
A
N
GLN
292
A
O
ILE
302
A
O
ILE
312
A
N
HIS
295
A
N
HIS
305
A
O
LYS
307
A
O
LYS
317
1
A
CG
GLU
304
A
CG
GLU
314
1
Y
1
A
CD
GLU
304
A
CD
GLU
314
1
Y
1
A
OE1
GLU
304
A
OE1
GLU
314
1
Y
1
A
OE2
GLU
304
A
OE2
GLU
314
1
Y
1
A
ASP
-2
A
ASP
1
1
Y
1
A
LEU
-1
A
LEU
2
1
Y
1
A
GLY
0
A
GLY
3
1
Y
1
A
SER
1
A
SER
4
1
Y
1
A
MET
2
A
MET
5
1
Y
1
A
ALA
3
A
ALA
6
1
Y
1
A
ASP
4
A
ASP
7
1
Y
1
A
PRO
5
A
PRO
8
1
Y
1
A
GLY
6
A
GLY
9
1
Y
1
A
TYR
7
A
TYR
10
1
Y
1
A
LEU
8
A
LEU
11
1
Y
1
A
LEU
9
A
LEU
12
1
Y
1
A
GLU
10
A
GLU
13
1
Y
1
A
ASP
11
A
ASP
14
1
Y
1
A
GLN
12
A
GLN
15
1
Y
1
A
ILE
13
A
ILE
16
1
Y
1
A
CYS
14
A
CYS
17
1
Y
1
A
ILE
15
A
ILE
18
1
Y
1
A
GLY
16
A
GLY
19
1
Y
1
A
TYR
17
A
TYR
20
1
Y
1
A
HIS
18
A
HIS
21
1
Y
1
A
ALA
19
A
ALA
22
1
Y
1
A
ASN
20
A
ASN
23
1
Y
1
A
ASN
21
A
ASN
24
1
Y
1
A
SER
22
A
SER
25
1
Y
1
A
THR
23
A
THR
26
1
Y
1
A
GLU
24
A
GLU
27
1
Y
1
A
GLN
25
A
GLN
28
1
Y
1
A
VAL
26
A
VAL
29
1
Y
1
A
ASP
27
A
ASP
30
1
Y
1
A
THR
28
A
THR
31
1
Y
1
A
ILE
29
A
ILE
32
1
Y
1
A
MET
30
A
MET
33
1
Y
1
A
GLU
31
A
GLU
34
1
Y
1
A
LYS
32
A
LYS
35
1
Y
1
A
ASN
33
A
ASN
36
1
Y
1
A
VAL
34
A
VAL
37
1
Y
1
A
THR
35
A
THR
38
1
Y
1
A
VAL
36
A
VAL
39
1
Y
1
A
THR
37
A
THR
40
1
Y
1
A
HIS
38
A
HIS
41
1
Y
1
A
ALA
39
A
ALA
42
1
Y
1
A
GLN
40
A
GLN
43
1
Y
1
A
ASP
41
A
ASP
44
1
Y
1
A
ILE
42
A
ILE
45
1
Y
1
A
ARG
313
A
ARG
323
1
Y
1
A
LEU
314
A
LEU
324
1
Y
1
A
VAL
315
A
VAL
325
1
Y
1
A
LEU
316
A
LEU
326
1
Y
1
A
ALA
317
A
ALA
327
1
Y
1
A
THR
318
A
THR
328
1
Y
1
A
GLY
319
A
GLY
329
1
Y
1
A
LEU
320
A
LEU
330
1
Y
1
A
ARG
321
A
ARG
331
1
Y
1
A
ASN
322
A
ASN
332
1
Y
1
A
THR
323
A
THR
333
1
Y
1
A
PRO
324
A
PRO
334
1
Y
1
A
GLN
325
A
GLN
335
1
Y
1
A
ARG
326
A
ARG
336
1
Y
1
B
GLY
1
B
GLY
1
1
Y
1
B
LEU
2
B
LEU
2
1
Y
1
B
PHE
3
B
PHE
3
1
Y
1
B
GLY
4
B
GLY
4
1
Y
1
B
ALA
5
B
ALA
5
1
Y
1
B
ILE
6
B
ILE
6
1
Y
1
B
ALA
7
B
ALA
7
1
Y
1
B
GLY
8
B
GLY
8
1
Y
1
B
PHE
9
B
PHE
9
1
Y
1
B
ILE
10
B
ILE
10
1
Y
1
B
GLU
11
B
GLU
11
1
Y
1
B
GLY
12
B
GLY
12
1
Y
1
B
GLY
13
B
GLY
13
1
Y
1
B
TRP
14
B
TRP
14
1
Y
1
B
GLN
15
B
GLN
15
1
Y
1
B
GLY
16
B
GLY
16
1
Y
1
B
MET
17
B
MET
17
1
Y
1
B
VAL
18
B
VAL
18
1
Y
1
B
ASP
19
B
ASP
19
1
Y
1
B
GLY
20
B
GLY
20
1
Y
1
B
TRP
21
B
TRP
21
1
Y
1
B
TYR
22
B
TYR
22
1
Y
1
B
GLY
23
B
GLY
23
1
Y
1
B
TYR
24
B
TYR
24
1
Y
1
B
HIS
25
B
HIS
25
1
Y
1
B
HIS
26
B
HIS
26
1
Y
1
B
SER
27
B
SER
27
1
Y
1
B
ASN
28
B
ASN
28
1
Y
1
B
GLU
29
B
GLU
29
1
Y
1
B
GLN
30
B
GLN
30
1
Y
1
B
GLY
31
B
GLY
31
1
Y
1
B
SER
32
B
SER
32
1
Y
1
B
GLY
33
B
GLY
33
1
Y
1
B
TYR
34
B
TYR
34
1
Y
1
B
ALA
35
B
ALA
35
1
Y
1
B
ALA
36
B
ALA
36
1
Y
1
B
ASP
37
B
ASP
37
1
Y
1
B
LYS
38
B
LYS
38
1
Y
1
B
GLU
39
B
GLU
39
1
Y
1
B
SER
40
B
SER
40
1
Y
1
B
THR
41
B
THR
41
1
Y
1
B
GLN
42
B
GLN
42
1
Y
1
B
LYS
43
B
LYS
43
1
Y
1
B
ALA
44
B
ALA
44
1
Y
1
B
ILE
45
B
ILE
45
1
Y
1
B
ASP
46
B
ASP
46
1
Y
1
B
GLY
47
B
GLY
47
1
Y
1
B
VAL
48
B
VAL
48
1
Y
1
B
THR
49
B
THR
49
1
Y
1
B
ASN
50
B
ASN
50
1
Y
1
B
LYS
51
B
LYS
51
1
Y
1
B
VAL
52
B
VAL
52
1
Y
1
B
ASN
53
B
ASN
53
1
Y
1
B
SER
54
B
SER
54
1
Y
1
B
ILE
55
B
ILE
55
1
Y
1
B
ILE
56
B
ILE
56
1
Y
1
B
ASP
57
B
ASP
57
1
Y
1
B
LYS
58
B
LYS
58
1
Y
1
B
MET
102
B
MET
102
1
Y
1
B
GLU
103
B
GLU
103
1
Y
1
B
ASN
104
B
ASN
104
1
Y
1
B
GLU
105
B
GLU
105
1
Y
1
B
ARG
106
B
ARG
106
1
Y
1
B
THR
107
B
THR
107
1
Y
1
B
LEU
108
B
LEU
108
1
Y
1
B
ASP
109
B
ASP
109
1
Y
1
B
PHE
110
B
PHE
110
1
Y
1
B
HIS
111
B
HIS
111
1
Y
1
B
ASP
112
B
ASP
112
1
Y
1
B
SER
113
B
SER
113
1
Y
1
B
ASN
114
B
ASN
114
1
Y
1
B
VAL
115
B
VAL
115
1
Y
1
B
LYS
116
B
LYS
116
1
Y
1
B
ASN
117
B
ASN
117
1
Y
1
B
LEU
118
B
LEU
118
1
Y
1
B
TYR
119
B
TYR
119
1
Y
1
B
ASP
120
B
ASP
120
1
Y
1
B
LYS
121
B
LYS
121
1
Y
1
B
VAL
122
B
VAL
122
1
Y
1
B
ARG
123
B
ARG
123
1
Y
1
B
LEU
124
B
LEU
124
1
Y
1
B
GLN
125
B
GLN
125
1
Y
1
B
LEU
126
B
LEU
126
1
Y
1
B
ARG
127
B
ARG
127
1
Y
1
B
ASP
128
B
ASP
128
1
Y
1
B
ASN
129
B
ASN
129
1
Y
1
B
ALA
130
B
ALA
130
1
Y
1
B
LYS
131
B
LYS
131
1
Y
1
B
GLU
132
B
GLU
132
1
Y
1
B
LEU
133
B
LEU
133
1
Y
1
B
GLY
134
B
GLY
134
1
Y
1
B
ASN
135
B
ASN
135
1
Y
1
B
GLY
136
B
GLY
136
1
Y
1
B
CYS
137
B
CYS
137
1
Y
1
B
PHE
138
B
PHE
138
1
Y
1
B
GLU
139
B
GLU
139
1
Y
1
B
PHE
140
B
PHE
140
1
Y
1
B
TYR
141
B
TYR
141
1
Y
1
B
HIS
142
B
HIS
142
1
Y
1
B
LYS
143
B
LYS
143
1
Y
1
B
CYS
144
B
CYS
144
1
Y
1
B
ASP
145
B
ASP
145
1
Y
1
B
ASN
146
B
ASN
146
1
Y
1
B
GLU
147
B
GLU
147
1
Y
1
B
CYS
148
B
CYS
148
1
Y
1
B
MET
149
B
MET
149
1
Y
1
B
GLU
150
B
GLU
150
1
Y
1
B
SER
151
B
SER
151
1
Y
1
B
VAL
152
B
VAL
152
1
Y
1
B
LYS
153
B
LYS
153
1
Y
1
B
ASN
154
B
ASN
154
1
Y
1
B
GLY
155
B
GLY
155
1
Y
1
B
THR
156
B
THR
156
1
Y
1
B
TYR
157
B
TYR
157
1
Y
1
B
ASP
158
B
ASP
158
1
Y
1
B
TYR
159
B
TYR
159
1
Y
1
B
PRO
160
B
PRO
160
1
Y
1
B
GLN
161
B
GLN
161
1
Y
1
B
TYR
162
B
TYR
162
1
Y
1
B
SER
163
B
SER
163
1
Y
1
B
GLU
164
B
GLU
164
1
Y
1
B
GLU
165
B
GLU
165
1
Y
1
B
ALA
166
B
ALA
166
1
Y
1
B
ARG
167
B
ARG
167
1
Y
1
B
LEU
168
B
LEU
168
1
Y
1
B
ASN
169
B
ASN
169
1
Y
1
B
ARG
170
B
ARG
170
1
Y
1
B
GLU
171
B
GLU
171
1
Y
1
B
GLU
172
B
GLU
172
1
Y
1
B
ILE
173
B
ILE
173
1
Y
1
B
SER
174
B
SER
174
1
Y
1
B
GLY
175
B
GLY
175
1
Y
1
B
VAL
176
B
VAL
176
1
Y
1
B
ARG
177
B
ARG
177
1
Y
1
B
SER
178
B
SER
178
1
Y
1
B
LEU
179
B
LEU
179
1
Y
1
B
VAL
180
B
VAL
180
1
Y
1
B
PRO
181
B
PRO
181
1
Y
1
B
ARG
182
B
ARG
182
1
Y
1
A
ARG
62
60.87
-114.10
1
A
GLU
83
-34.90
138.38
1
A
SER
92
-118.82
79.57
1
A
ASP
96
-115.99
-92.87
1
A
ARG
114
-140.13
31.44
1
A
HIS
117
-162.92
117.36
1
A
CYS
139
-117.55
70.81
1
A
SER
146
-132.00
-157.95
1
A
THR
171
-90.56
31.59
1
A
GLN
196
64.87
-59.36
1
A
THR
206
-118.59
-149.89
1
A
ASN
240
79.85
-7.70
1
A
ASN
276
65.28
-8.14
49.152
-0.83
-0.42
0.00
-0.83
0.00
1.25
0.876
0.875
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. Authors believe that the missing residues are in various orientations throughout the crystal. As a result, the maps for these regions did not allow model building.
0.25081
0.23827
0.23891
2.96
192.09
1494
28027
5.1
99.19
1.000
1.000
9.121
0.169
0.2770
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.277
0.231
0.80
0.80
1.40
MAXIMUM LIKELIHOOD
MASK
2.96
192.09
16
2609
38
0
2555
0.009
0.022
2660
1.287
1.962
3610
5.939
5.000
318
41.632
25.081
124
18.488
15.000
452
23.509
15.000
10
0.086
0.200
391
0.004
0.021
2005
0.517
1.500
1597
0.991
2.000
2586
1.168
3.000
1063
2.004
4.500
1024
0.426
0.326
3.035
109
1806
20
89.61
2.950
50.000
3S13
29523
0.119
1
10.200
12.600
99.900
0.480
2.950
3.060
1
11.100
99.700
0.353
3.060
3.180
1
12.100
99.900
0.266
3.180
3.320
1
12.500
100.000
0.205
3.320
3.500
1
12.700
100.000
0.157
3.500
3.720
1
12.800
100.000
0.126
3.720
4.000
1
12.900
100.000
0.104
4.000
4.410
1
13.100
100.000
0.092
4.410
5.040
1
13.200
100.000
0.079
5.040
6.350
1
13.000
100.000
0.055
6.350
50.000
1
12.300
100.000
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
program
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
Wed Oct 28 14:30:30 2009
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
2.1.4
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
data extraction
PDB
deposit@deposit.rcsb.org
June 10, 2010
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.10
data collection
HKL-2000
data reduction
HKL-2000
Hemagglutinin HA1 chain, Hemagglutinin HA2 chain
Crystal structure of H5N1 influenza virus hemagglutinin, strain YU562 crystal form 2
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
5
N
N
5
N
N
A
SER
65
A
SER
69
HELX_P
A
GLY
72
A
GLY
76
1
1
8
A
ASN
73
A
ASN
77
HELX_P
A
ILE
80
A
ILE
84
5
2
8
A
ASP
104
A
ASP
110
HELX_P
A
SER
113
A
SER
119
1
3
10
A
PRO
125
A
PRO
131
HELX_P
A
TRP
127
A
TRP
135
5
4
5
A
ASP
187
A
ASP
196
HELX_P
A
GLN
196
A
GLN
205
1
5
10
B
GLU
74
B
GLU
74
HELX_P
B
LEU
101
B
LEU
101
1
6
28
disulf
2.099
A
CYS
52
A
SG
CYS
55
1_555
A
CYS
277
A
SG
CYS
287
1_555
disulf
2.057
A
CYS
64
A
SG
CYS
68
1_555
A
CYS
76
A
SG
CYS
80
1_555
disulf
2.120
A
CYS
97
A
SG
CYS
103
1_555
A
CYS
139
A
SG
CYS
148
1_555
disulf
2.054
A
CYS
281
A
SG
CYS
291
1_555
A
CYS
305
A
SG
CYS
315
1_555
covale
1.429
one
N-Glycosylation
A
ASN
169
A
ND2
ASN
178
1_555
C
NAG
1
C
C1
NAG
1_555
covale
1.448
both
C
NAG
1
C
O4
NAG
1_555
C
NAG
2
C
C1
NAG
1_555
VIRAL PROTEIN
hemagglutinin, viral protein, viral envelope protein, viral fusion protein
HEMA_I01A1
UNP
1
6
Q80A30
DQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLDGVKPLILRDCSVAGWLLGNPMCDEFINVPEWSYIV
EKASPANDLCYPGDFNDYEELKHLLSRINHFEKIQIIPKSSWSNHEASSGVSSACPYLGKSSFFRNVVWLIKKNSAYPTI
KRSYNNTNQEDLLVLWGIHHPNDAAEQTKLYQNPTTYISVGTSTLNQRLVPKIATRSKVNGQSGRMEFFWTILKPNDAIN
FESNGNFIAPEYAYKIVKKGDSAIMKSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRNT
PQR
HEMA_I01A1
UNP
2
336
Q80A30
GLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENL
NKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVKNGTYDYP
QYSEEARLNREEISGV
6
328
3S13
11
326
Q80A30
A
1
14
336
336
511
3S13
1
176
Q80A30
B
2
1
176
1
expression tag
ASP
-2
3S13
A
Q80A30
UNP
1
1
expression tag
LEU
-1
3S13
A
Q80A30
UNP
2
1
expression tag
GLY
0
3S13
A
Q80A30
UNP
3
1
expression tag
SER
1
3S13
A
Q80A30
UNP
4
1
expression tag
MET
2
3S13
A
Q80A30
UNP
5
1
expression tag
ALA
3
3S13
A
Q80A30
UNP
6
1
expression tag
ASP
4
3S13
A
Q80A30
UNP
7
1
expression tag
PRO
5
3S13
A
Q80A30
UNP
8
1
expression tag
GLY
6
3S13
A
Q80A30
UNP
9
1
expression tag
TYR
7
3S13
A
Q80A30
UNP
10
1
expression tag
LEU
8
3S13
A
Q80A30
UNP
11
1
expression tag
LEU
9
3S13
A
Q80A30
UNP
12
1
expression tag
GLU
10
3S13
A
Q80A30
UNP
13
2
expression tag
ARG
177
3S13
B
Q80A30
UNP
177
2
expression tag
SER
178
3S13
B
Q80A30
UNP
178
2
expression tag
LEU
179
3S13
B
Q80A30
UNP
179
2
expression tag
VAL
180
3S13
B
Q80A30
UNP
180
2
expression tag
PRO
181
3S13
B
Q80A30
UNP
181
2
expression tag
ARG
182
3S13
B
Q80A30
UNP
182
2
3
5
5
2
4
2
2
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
A
LEU
51
A
LEU
54
A
LEU
53
A
LEU
57
A
A
TYR
274
A
TYR
284
A
THR
279
A
THR
289
A
LEU
59
A
LEU
63
A
ILE
60
A
ILE
64
A
ILE
87
A
ILE
92
A
GLU
89
A
GLU
94
A
ILE
267
A
ILE
277
A
LYS
269
A
LYS
279
A
GLY
100
A
GLY
106
A
PHE
102
A
PHE
108
A
ARG
229
A
ARG
238
A
LEU
237
A
LEU
246
A
LEU
176
A
LEU
185
A
HIS
184
A
HIS
193
A
TYR
256
A
TYR
265
A
LYS
263
A
LYS
272
A
ILE
115
A
ILE
121
A
GLN
122
A
GLN
128
A
GLY
100
A
GLY
106
A
PHE
102
A
PHE
108
A
ARG
229
A
ARG
238
A
LEU
237
A
LEU
246
A
LEU
176
A
LEU
185
A
HIS
184
A
HIS
193
A
PHE
251
A
PHE
260
A
PRO
254
A
PRO
263
A
VAL
151
A
VAL
160
A
TRP
153
A
TRP
162
A
SER
136
A
SER
145
A
TYR
141
A
TYR
150
A
LYS
144
A
LYS
153
A
SER
146
A
SER
155
A
ILE
164
A
ILE
173
A
ASN
169
A
ASN
178
A
ALA
242
A
ALA
251
A
SER
247
A
SER
256
A
ILE
202
A
ILE
211
A
GLY
205
A
GLY
214
A
ASN
210
A
ASN
219
A
LEU
213
A
LEU
222
A
CYS
281
A
CYS
291
A
GLN
282
A
GLN
292
A
ILE
302
A
ILE
312
A
GLY
303
A
GLY
313
A
PHE
294
A
PHE
304
A
HIS
295
A
HIS
305
A
LYS
307
A
LYS
317
A
TYR
308
A
TYR
318
150
P 3 2 1