0.013304
0.000000
0.000000
0.000000
0.009754
0.000000
0.000000
0.000000
0.019413
0.000000
0.000000
0.000000
Joint Center for Structural Genomics (JCSG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.000
90.000
90.000
75.168
102.524
51.511
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
C21 H36 N7 O16 P3 S
767.534
COENZYME A
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
Crystal structure of a Hypothetical acetyltransferase (DR_1678) from Deinococcus radiodurans at 1.19 A resolution
10.2210/pdb3s6f/pdb
pdb_00003s6f
100
1
Flat mirror (vertical focusing); single crystal Si(111) bent monochromator (ho rizontal focusing)
CCD
2007-07-20
MARMOSAIC 325 mm CCD
single crystal Si(111) bent
MAD
M
x-ray
1
0.91837
1.0
0.97944
1.0
0.97916
1.0
BL11-1
SSRL
0.91837,0.97944,0.97916
SYNCHROTRON
SSRL BEAMLINE BL11-1
16168.780
Hypothetical acetyltransferase
1
man
polymer
767.534
COENZYME A
1
syn
non-polymer
40.078
CALCIUM ION
2
syn
non-polymer
18.015
water
236
nat
water
no
yes
G(MSE)TQRSLADIQFQTTLEGVTPAQLGGFFEGWPNPPTPETLWRILDRAAVFVLARTPDGQVIGFVNALSDGILAASI
PLLEVQAGWRSLGLGSEL(MSE)RRVLTELGDLY(MSE)VDLSCDDDVVPFYERLGLKRANA(MSE)FLRRYDNQAGIPA
E
GMTQRSLADIQFQTTLEGVTPAQLGGFFEGWPNPPTPETLWRILDRAAVFVLARTPDGQVIGFVNALSDGILAASIPLLE
VQAGWRSLGLGSELMRRVLTELGDLYMVDLSCDDDVVPFYERLGLKRANAMFLRRYDNQAGIPAE
A
376366
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
DR_1678
1299
Deinococcus radiodurans
562
Escherichia Coli
HK100
Plasmid
SpeedET
1
3.07
59.92
VAPOR DIFFUSION, SITTING DROP
8.0
0.2M Ca(OAc)2, 10.0% PEG-8000, 0.1M Imidazole pH 8.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K
277
Joint Center for Structural Genomics
JCSG
PSI:Biology
pdbx_struct_assembly_auth_evidence
software
database_2
pdbx_struct_conn_angle
pdbx_struct_special_symmetry
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Structure summary
Author supporting evidence
Refinement description
Database references
Derived calculations
1
0
2011-07-06
1
1
2011-07-13
1
2
2014-12-24
1
3
2017-10-25
1
4
2023-02-01
_software.classification
_software.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
RCSB
Y
RCSB
2011-05-25
REL
REL
COA
COENZYME A
CA
CALCIUM ION
HOH
water
THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE.
COA
200
2
COA
COA
200
A
CA
200
3
CA
CA
145
A
CA
201
3
CA
CA
201
A
HOH
202
4
HOH
HOH
202
A
HOH
203
4
HOH
HOH
203
A
HOH
204
4
HOH
HOH
204
A
HOH
205
4
HOH
HOH
205
A
HOH
206
4
HOH
HOH
206
A
HOH
207
4
HOH
HOH
207
A
HOH
208
4
HOH
HOH
208
A
HOH
209
4
HOH
HOH
209
A
HOH
210
4
HOH
HOH
210
A
HOH
211
4
HOH
HOH
211
A
HOH
212
4
HOH
HOH
212
A
HOH
213
4
HOH
HOH
213
A
HOH
214
4
HOH
HOH
214
A
HOH
215
4
HOH
HOH
215
A
HOH
216
4
HOH
HOH
216
A
HOH
217
4
HOH
HOH
217
A
HOH
218
4
HOH
HOH
218
A
HOH
219
4
HOH
HOH
219
A
HOH
220
4
HOH
HOH
220
A
HOH
221
4
HOH
HOH
221
A
HOH
222
4
HOH
HOH
222
A
HOH
223
4
HOH
HOH
223
A
HOH
224
4
HOH
HOH
224
A
HOH
225
4
HOH
HOH
225
A
HOH
226
4
HOH
HOH
226
A
HOH
227
4
HOH
HOH
227
A
HOH
228
4
HOH
HOH
228
A
HOH
229
4
HOH
HOH
229
A
HOH
230
4
HOH
HOH
230
A
HOH
231
4
HOH
HOH
231
A
HOH
232
4
HOH
HOH
232
A
HOH
233
4
HOH
HOH
233
A
HOH
234
4
HOH
HOH
234
A
HOH
235
4
HOH
HOH
235
A
HOH
236
4
HOH
HOH
236
A
HOH
237
4
HOH
HOH
237
A
HOH
238
4
HOH
HOH
238
A
HOH
239
4
HOH
HOH
239
A
HOH
240
4
HOH
HOH
240
A
HOH
241
4
HOH
HOH
241
A
HOH
242
4
HOH
HOH
242
A
HOH
243
4
HOH
HOH
243
A
HOH
244
4
HOH
HOH
244
A
HOH
245
4
HOH
HOH
245
A
HOH
246
4
HOH
HOH
246
A
HOH
247
4
HOH
HOH
247
A
HOH
248
4
HOH
HOH
248
A
HOH
249
4
HOH
HOH
249
A
HOH
250
4
HOH
HOH
250
A
HOH
251
4
HOH
HOH
251
A
HOH
252
4
HOH
HOH
252
A
HOH
253
4
HOH
HOH
253
A
HOH
254
4
HOH
HOH
254
A
HOH
255
4
HOH
HOH
255
A
HOH
256
4
HOH
HOH
256
A
HOH
257
4
HOH
HOH
257
A
HOH
258
4
HOH
HOH
258
A
HOH
259
4
HOH
HOH
259
A
HOH
260
4
HOH
HOH
260
A
HOH
261
4
HOH
HOH
261
A
HOH
262
4
HOH
HOH
262
A
HOH
263
4
HOH
HOH
263
A
HOH
264
4
HOH
HOH
264
A
HOH
265
4
HOH
HOH
265
A
HOH
266
4
HOH
HOH
266
A
HOH
267
4
HOH
HOH
267
A
HOH
268
4
HOH
HOH
268
A
HOH
269
4
HOH
HOH
269
A
HOH
270
4
HOH
HOH
270
A
HOH
271
4
HOH
HOH
271
A
HOH
272
4
HOH
HOH
272
A
HOH
273
4
HOH
HOH
273
A
HOH
274
4
HOH
HOH
274
A
HOH
275
4
HOH
HOH
275
A
HOH
276
4
HOH
HOH
276
A
HOH
277
4
HOH
HOH
277
A
HOH
278
4
HOH
HOH
278
A
HOH
279
4
HOH
HOH
279
A
HOH
280
4
HOH
HOH
280
A
HOH
281
4
HOH
HOH
281
A
HOH
282
4
HOH
HOH
282
A
HOH
283
4
HOH
HOH
283
A
HOH
284
4
HOH
HOH
284
A
HOH
285
4
HOH
HOH
285
A
HOH
286
4
HOH
HOH
286
A
HOH
287
4
HOH
HOH
287
A
HOH
288
4
HOH
HOH
288
A
HOH
289
4
HOH
HOH
289
A
HOH
290
4
HOH
HOH
290
A
HOH
291
4
HOH
HOH
291
A
HOH
292
4
HOH
HOH
292
A
HOH
293
4
HOH
HOH
293
A
HOH
294
4
HOH
HOH
294
A
HOH
295
4
HOH
HOH
295
A
HOH
296
4
HOH
HOH
296
A
HOH
297
4
HOH
HOH
297
A
HOH
298
4
HOH
HOH
298
A
HOH
299
4
HOH
HOH
299
A
HOH
300
4
HOH
HOH
300
A
HOH
301
4
HOH
HOH
301
A
HOH
302
4
HOH
HOH
302
A
HOH
303
4
HOH
HOH
303
A
HOH
304
4
HOH
HOH
304
A
HOH
305
4
HOH
HOH
305
A
HOH
306
4
HOH
HOH
306
A
HOH
307
4
HOH
HOH
307
A
HOH
308
4
HOH
HOH
308
A
HOH
309
4
HOH
HOH
309
A
HOH
310
4
HOH
HOH
310
A
HOH
311
4
HOH
HOH
311
A
HOH
312
4
HOH
HOH
312
A
HOH
313
4
HOH
HOH
313
A
HOH
314
4
HOH
HOH
314
A
HOH
315
4
HOH
HOH
315
A
HOH
316
4
HOH
HOH
316
A
HOH
317
4
HOH
HOH
317
A
HOH
318
4
HOH
HOH
318
A
HOH
319
4
HOH
HOH
319
A
HOH
320
4
HOH
HOH
320
A
HOH
321
4
HOH
HOH
321
A
HOH
322
4
HOH
HOH
322
A
HOH
323
4
HOH
HOH
323
A
HOH
324
4
HOH
HOH
324
A
HOH
325
4
HOH
HOH
325
A
HOH
326
4
HOH
HOH
326
A
HOH
327
4
HOH
HOH
327
A
HOH
328
4
HOH
HOH
328
A
HOH
329
4
HOH
HOH
329
A
HOH
330
4
HOH
HOH
330
A
HOH
331
4
HOH
HOH
331
A
HOH
332
4
HOH
HOH
332
A
HOH
333
4
HOH
HOH
333
A
HOH
334
4
HOH
HOH
334
A
HOH
335
4
HOH
HOH
335
A
HOH
336
4
HOH
HOH
336
A
HOH
337
4
HOH
HOH
337
A
HOH
338
4
HOH
HOH
338
A
HOH
339
4
HOH
HOH
339
A
HOH
340
4
HOH
HOH
340
A
HOH
341
4
HOH
HOH
341
A
HOH
342
4
HOH
HOH
342
A
HOH
343
4
HOH
HOH
343
A
HOH
344
4
HOH
HOH
344
A
HOH
345
4
HOH
HOH
345
A
HOH
346
4
HOH
HOH
346
A
HOH
347
4
HOH
HOH
347
A
HOH
348
4
HOH
HOH
348
A
HOH
349
4
HOH
HOH
349
A
HOH
350
4
HOH
HOH
350
A
HOH
351
4
HOH
HOH
351
A
HOH
352
4
HOH
HOH
352
A
HOH
353
4
HOH
HOH
353
A
HOH
354
4
HOH
HOH
354
A
HOH
355
4
HOH
HOH
355
A
HOH
356
4
HOH
HOH
356
A
HOH
357
4
HOH
HOH
357
A
HOH
358
4
HOH
HOH
358
A
HOH
359
4
HOH
HOH
359
A
HOH
360
4
HOH
HOH
360
A
HOH
361
4
HOH
HOH
361
A
HOH
362
4
HOH
HOH
362
A
HOH
363
4
HOH
HOH
363
A
HOH
364
4
HOH
HOH
364
A
HOH
365
4
HOH
HOH
365
A
HOH
366
4
HOH
HOH
366
A
HOH
367
4
HOH
HOH
367
A
HOH
368
4
HOH
HOH
368
A
HOH
369
4
HOH
HOH
369
A
HOH
370
4
HOH
HOH
370
A
HOH
371
4
HOH
HOH
371
A
HOH
372
4
HOH
HOH
372
A
HOH
373
4
HOH
HOH
373
A
HOH
374
4
HOH
HOH
374
A
HOH
375
4
HOH
HOH
375
A
HOH
376
4
HOH
HOH
376
A
HOH
377
4
HOH
HOH
377
A
HOH
378
4
HOH
HOH
378
A
HOH
379
4
HOH
HOH
379
A
HOH
380
4
HOH
HOH
380
A
HOH
381
4
HOH
HOH
381
A
HOH
382
4
HOH
HOH
382
A
HOH
383
4
HOH
HOH
383
A
HOH
384
4
HOH
HOH
384
A
HOH
385
4
HOH
HOH
385
A
HOH
386
4
HOH
HOH
386
A
HOH
387
4
HOH
HOH
387
A
HOH
388
4
HOH
HOH
388
A
HOH
389
4
HOH
HOH
389
A
HOH
390
4
HOH
HOH
390
A
HOH
391
4
HOH
HOH
391
A
HOH
392
4
HOH
HOH
392
A
HOH
393
4
HOH
HOH
393
A
HOH
394
4
HOH
HOH
394
A
HOH
395
4
HOH
HOH
395
A
HOH
396
4
HOH
HOH
396
A
HOH
397
4
HOH
HOH
397
A
HOH
398
4
HOH
HOH
398
A
HOH
399
4
HOH
HOH
399
A
HOH
400
4
HOH
HOH
400
A
HOH
401
4
HOH
HOH
401
A
HOH
402
4
HOH
HOH
402
A
HOH
403
4
HOH
HOH
403
A
HOH
404
4
HOH
HOH
404
A
HOH
405
4
HOH
HOH
405
A
HOH
406
4
HOH
HOH
406
A
HOH
407
4
HOH
HOH
407
A
HOH
408
4
HOH
HOH
408
A
HOH
409
4
HOH
HOH
409
A
HOH
410
4
HOH
HOH
410
A
HOH
411
4
HOH
HOH
411
A
HOH
412
4
HOH
HOH
412
A
HOH
413
4
HOH
HOH
413
A
HOH
414
4
HOH
HOH
414
A
HOH
415
4
HOH
HOH
415
A
HOH
416
4
HOH
HOH
416
A
HOH
417
4
HOH
HOH
417
A
HOH
418
4
HOH
HOH
418
A
HOH
419
4
HOH
HOH
419
A
HOH
420
4
HOH
HOH
420
A
HOH
421
4
HOH
HOH
421
A
HOH
422
4
HOH
HOH
422
A
HOH
423
4
HOH
HOH
423
A
HOH
424
4
HOH
HOH
424
A
HOH
425
4
HOH
HOH
425
A
HOH
426
4
HOH
HOH
426
A
HOH
427
4
HOH
HOH
427
A
HOH
428
4
HOH
HOH
428
A
HOH
429
4
HOH
HOH
429
A
HOH
430
4
HOH
HOH
430
A
HOH
431
4
HOH
HOH
431
A
HOH
432
4
HOH
HOH
432
A
HOH
433
4
HOH
HOH
433
A
HOH
434
4
HOH
HOH
434
A
HOH
435
4
HOH
HOH
435
A
HOH
436
4
HOH
HOH
436
A
HOH
437
4
HOH
HOH
437
A
n
1
0
A
MSE
1
n
2
MSE
1
A
THR
2
n
3
THR
2
A
GLN
3
n
4
GLN
3
A
ARG
4
n
5
ARG
4
A
SER
5
n
6
SER
5
A
LEU
6
n
7
LEU
6
A
ALA
7
n
8
ALA
7
A
ASP
8
n
9
ASP
8
A
ILE
9
n
10
ILE
9
A
GLN
10
n
11
GLN
10
A
PHE
11
n
12
PHE
11
A
GLN
12
n
13
GLN
12
A
THR
13
n
14
THR
13
A
THR
14
n
15
THR
14
A
LEU
15
n
16
LEU
15
A
GLU
16
n
17
GLU
16
A
GLY
17
n
18
GLY
17
A
VAL
18
n
19
VAL
18
A
THR
19
n
20
THR
19
A
PRO
20
n
21
PRO
20
A
ALA
21
n
22
ALA
21
A
GLN
22
n
23
GLN
22
A
LEU
23
n
24
LEU
23
A
GLY
24
n
25
GLY
24
A
GLY
25
n
26
GLY
25
A
PHE
26
n
27
PHE
26
A
PHE
27
n
28
PHE
27
A
GLU
28
n
29
GLU
28
A
GLY
29
n
30
GLY
29
A
TRP
30
n
31
TRP
30
A
PRO
31
n
32
PRO
31
A
ASN
32
n
33
ASN
32
A
PRO
33
n
34
PRO
33
A
PRO
34
n
35
PRO
34
A
THR
35
n
36
THR
35
A
PRO
36
n
37
PRO
36
A
GLU
37
n
38
GLU
37
A
THR
38
n
39
THR
38
A
LEU
39
n
40
LEU
39
A
TRP
40
n
41
TRP
40
A
ARG
41
n
42
ARG
41
A
ILE
42
n
43
ILE
42
A
LEU
43
n
44
LEU
43
A
ASP
44
n
45
ASP
44
A
ARG
45
n
46
ARG
45
A
ALA
46
n
47
ALA
46
A
ALA
47
n
48
ALA
47
A
VAL
48
n
49
VAL
48
A
PHE
49
n
50
PHE
49
A
VAL
50
n
51
VAL
50
A
LEU
51
n
52
LEU
51
A
ALA
52
n
53
ALA
52
A
ARG
53
n
54
ARG
53
A
THR
54
n
55
THR
54
A
PRO
55
n
56
PRO
55
A
ASP
56
n
57
ASP
56
A
GLY
57
n
58
GLY
57
A
GLN
58
n
59
GLN
58
A
VAL
59
n
60
VAL
59
A
ILE
60
n
61
ILE
60
A
GLY
61
n
62
GLY
61
A
PHE
62
n
63
PHE
62
A
VAL
63
n
64
VAL
63
A
ASN
64
n
65
ASN
64
A
ALA
65
n
66
ALA
65
A
LEU
66
n
67
LEU
66
A
SER
67
n
68
SER
67
A
ASP
68
n
69
ASP
68
A
GLY
69
n
70
GLY
69
A
ILE
70
n
71
ILE
70
A
LEU
71
n
72
LEU
71
A
ALA
72
n
73
ALA
72
A
ALA
73
n
74
ALA
73
A
SER
74
n
75
SER
74
A
ILE
75
n
76
ILE
75
A
PRO
76
n
77
PRO
76
A
LEU
77
n
78
LEU
77
A
LEU
78
n
79
LEU
78
A
GLU
79
n
80
GLU
79
A
VAL
80
n
81
VAL
80
A
GLN
81
n
82
GLN
81
A
ALA
82
n
83
ALA
82
A
GLY
83
n
84
GLY
83
A
TRP
84
n
85
TRP
84
A
ARG
85
n
86
ARG
85
A
SER
86
n
87
SER
86
A
LEU
87
n
88
LEU
87
A
GLY
88
n
89
GLY
88
A
LEU
89
n
90
LEU
89
A
GLY
90
n
91
GLY
90
A
SER
91
n
92
SER
91
A
GLU
92
n
93
GLU
92
A
LEU
93
n
94
LEU
93
A
MSE
94
n
95
MSE
94
A
ARG
95
n
96
ARG
95
A
ARG
96
n
97
ARG
96
A
VAL
97
n
98
VAL
97
A
LEU
98
n
99
LEU
98
A
THR
99
n
100
THR
99
A
GLU
100
n
101
GLU
100
A
LEU
101
n
102
LEU
101
A
GLY
102
n
103
GLY
102
A
ASP
103
n
104
ASP
103
A
LEU
104
n
105
LEU
104
A
TYR
105
n
106
TYR
105
A
MSE
106
n
107
MSE
106
A
VAL
107
n
108
VAL
107
A
ASP
108
n
109
ASP
108
A
LEU
109
n
110
LEU
109
A
SER
110
n
111
SER
110
A
CYS
111
n
112
CYS
111
A
ASP
112
n
113
ASP
112
A
ASP
113
n
114
ASP
113
A
ASP
114
n
115
ASP
114
A
VAL
115
n
116
VAL
115
A
VAL
116
n
117
VAL
116
A
PRO
117
n
118
PRO
117
A
PHE
118
n
119
PHE
118
A
TYR
119
n
120
TYR
119
A
GLU
120
n
121
GLU
120
A
ARG
121
n
122
ARG
121
A
LEU
122
n
123
LEU
122
A
GLY
123
n
124
GLY
123
A
LEU
124
n
125
LEU
124
A
LYS
125
n
126
LYS
125
A
ARG
126
n
127
ARG
126
A
ALA
127
n
128
ALA
127
A
ASN
128
n
129
ASN
128
A
ALA
129
n
130
ALA
129
A
MSE
130
n
131
MSE
130
A
PHE
131
n
132
PHE
131
A
LEU
132
n
133
LEU
132
A
ARG
133
n
134
ARG
133
A
ARG
134
n
135
ARG
134
A
TYR
135
n
136
TYR
135
A
ASP
136
n
137
ASP
136
A
ASN
137
n
138
ASN
137
A
GLN
138
n
139
GLN
138
A
ALA
139
n
140
ALA
139
A
GLY
140
n
141
GLY
140
A
ILE
141
n
142
ILE
141
A
PRO
142
n
143
PRO
142
A
ALA
143
n
144
ALA
143
A
n
145
144
A
author_and_software_defined_assembly
PISA
2
dimeric
gel filtration
6980
-53
13760
A
SER
86
A
O
SER
87
1_555
A
CA
201
D
CA
CA
1_555
A
SER
86
A
OG
SER
87
1_555
72.8
A
SER
86
A
O
SER
87
1_555
A
CA
201
D
CA
CA
1_555
A
HOH
243
A
E
O
HOH
1_555
86.6
A
SER
86
A
OG
SER
87
1_555
A
CA
201
D
CA
CA
1_555
A
HOH
243
A
E
O
HOH
1_555
80.7
A
SER
86
A
O
SER
87
1_555
A
CA
201
D
CA
CA
1_555
A
HOH
389
E
O
HOH
1_555
75.2
A
SER
86
A
OG
SER
87
1_555
A
CA
201
D
CA
CA
1_555
A
HOH
389
E
O
HOH
1_555
147.3
A
HOH
243
A
E
O
HOH
1_555
A
CA
201
D
CA
CA
1_555
A
HOH
389
E
O
HOH
1_555
104.2
A
SER
86
A
O
SER
87
1_555
A
CA
201
D
CA
CA
1_555
A
HOH
390
E
O
HOH
1_555
143.8
A
SER
86
A
OG
SER
87
1_555
A
CA
201
D
CA
CA
1_555
A
HOH
390
E
O
HOH
1_555
140.1
A
HOH
243
A
E
O
HOH
1_555
A
CA
201
D
CA
CA
1_555
A
HOH
390
E
O
HOH
1_555
109.5
A
HOH
389
E
O
HOH
1_555
A
CA
201
D
CA
CA
1_555
A
HOH
390
E
O
HOH
1_555
69.6
A
SER
86
A
O
SER
87
1_555
A
CA
201
D
CA
CA
1_555
A
HOH
391
E
O
HOH
1_555
142.4
A
SER
86
A
OG
SER
87
1_555
A
CA
201
D
CA
CA
1_555
A
HOH
391
E
O
HOH
1_555
70.8
A
HOH
243
A
E
O
HOH
1_555
A
CA
201
D
CA
CA
1_555
A
HOH
391
E
O
HOH
1_555
78.6
A
HOH
389
E
O
HOH
1_555
A
CA
201
D
CA
CA
1_555
A
HOH
391
E
O
HOH
1_555
141.9
A
HOH
390
E
O
HOH
1_555
A
CA
201
D
CA
CA
1_555
A
HOH
391
E
O
HOH
1_555
73.7
A
HOH
211
E
O
HOH
1_555
A
CA
145
C
CA
CA
1_555
A
HOH
221
E
O
HOH
1_555
79.4
A
HOH
211
E
O
HOH
1_555
A
CA
145
C
CA
CA
1_555
A
HOH
231
E
O
HOH
1_555
82.8
A
HOH
221
E
O
HOH
1_555
A
CA
145
C
CA
CA
1_555
A
HOH
231
E
O
HOH
1_555
136.4
A
HOH
211
E
O
HOH
1_555
A
CA
145
C
CA
CA
1_555
A
HOH
242
E
O
HOH
1_555
74.9
A
HOH
221
E
O
HOH
1_555
A
CA
145
C
CA
CA
1_555
A
HOH
242
E
O
HOH
1_555
70.8
A
HOH
231
E
O
HOH
1_555
A
CA
145
C
CA
CA
1_555
A
HOH
242
E
O
HOH
1_555
140.6
A
HOH
211
E
O
HOH
1_555
A
CA
145
C
CA
CA
1_555
A
HOH
305
E
O
HOH
1_555
145.6
A
HOH
221
E
O
HOH
1_555
A
CA
145
C
CA
CA
1_555
A
HOH
305
E
O
HOH
1_555
87.1
A
HOH
231
E
O
HOH
1_555
A
CA
145
C
CA
CA
1_555
A
HOH
305
E
O
HOH
1_555
126.5
A
HOH
242
E
O
HOH
1_555
A
CA
145
C
CA
CA
1_555
A
HOH
305
E
O
HOH
1_555
70.8
A
HOH
211
E
O
HOH
1_555
A
CA
145
C
CA
CA
1_555
A
HOH
385
E
O
HOH
1_555
80.2
A
HOH
221
E
O
HOH
1_555
A
CA
145
C
CA
CA
1_555
A
HOH
385
E
O
HOH
1_555
142.3
A
HOH
231
E
O
HOH
1_555
A
CA
145
C
CA
CA
1_555
A
HOH
385
E
O
HOH
1_555
71.0
A
HOH
242
E
O
HOH
1_555
A
CA
145
C
CA
CA
1_555
A
HOH
385
E
O
HOH
1_555
73.5
A
HOH
305
E
O
HOH
1_555
A
CA
145
C
CA
CA
1_555
A
HOH
385
E
O
HOH
1_555
92.3
A
HOH
211
E
O
HOH
1_555
A
CA
145
C
CA
CA
1_555
A
HOH
388
E
O
HOH
1_555
111.5
A
HOH
221
E
O
HOH
1_555
A
CA
145
C
CA
CA
1_555
A
HOH
388
E
O
HOH
1_555
75.7
A
HOH
231
E
O
HOH
1_555
A
CA
145
C
CA
CA
1_555
A
HOH
388
E
O
HOH
1_555
74.4
A
HOH
242
E
O
HOH
1_555
A
CA
145
C
CA
CA
1_555
A
HOH
388
E
O
HOH
1_555
144.1
A
HOH
305
E
O
HOH
1_555
A
CA
145
C
CA
CA
1_555
A
HOH
388
E
O
HOH
1_555
95.3
A
HOH
385
E
O
HOH
1_555
A
CA
145
C
CA
CA
1_555
A
HOH
388
E
O
HOH
1_555
141.6
A
MSE
1
SELENOMETHIONINE
A
MSE
2
MET
A
MSE
94
SELENOMETHIONINE
A
MSE
95
MET
A
MSE
106
SELENOMETHIONINE
A
MSE
107
MET
A
MSE
130
SELENOMETHIONINE
A
MSE
131
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
3_656
-x+1,y,-z+3/2
crystal symmetry operation
75.1680000000
0.0000000000
77.2665000000
A
N
GLN
10
A
N
GLN
11
A
O
ARG
53
A
O
ARG
54
A
N
ALA
52
A
N
ALA
53
A
O
ILE
60
A
O
ILE
61
A
N
PHE
62
A
N
PHE
63
A
O
GLU
79
A
O
GLU
80
A
N
GLN
10
A
N
GLN
11
A
O
ARG
53
A
O
ARG
54
A
N
ALA
52
A
N
ALA
53
A
O
ILE
60
A
O
ILE
61
A
N
LEU
66
A
N
LEU
67
A
O
SER
74
A
O
SER
75
A
N
ALA
73
A
N
ALA
74
A
O
MSE
106
A
O
MSE
107
1
A
HOH
369
E
HOH
1
A
GLY
0
A
GLY
1
1
Y
1
A
GLU
144
A
GLU
145
1
Y
1
-3.29
0.50
120.30
117.01
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
95
95
95
N
1
A
THR
2
-135.33
-45.05
1
A
LEU
71
-134.99
-32.94
1
A
ASP
103
-88.29
40.24
1
A
ASP
103
-90.72
43.51
1
A
ALA
127
-138.52
-159.74
51.830
16.7661
6.760
0.2800
0.0000
0.0000
0.0600
0.0000
-0.3400
0.9770
0.9730
1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. COENZYME A (COA) HAS BEEN MODELED BASED ON DENSITY. 5. THERE IS SOME UNMODELED DENSITY NEAR COA SUGGESTING THE PRESENCE OF A SMALL MOLECULE LIGAND.
0.1504
0.1351
0.1358
1.1900
39.253
3215
63421
5.1000
99.0500
1.000
0.320
0.8940
0.0180
RANDOM
1
THROUGHOUT
0.000
MAD
0.031
0.0300
0.8000
0.8000
1.4000
MAXIMUM LIKELIHOOD WITH PHASES
BABINET MODEL WITH MASK
1.1900
39.253
236
1397
50
0
1111
0.015
0.022
1379
0.001
0.020
929
1.833
2.058
1915
1.040
3.000
2263
6.394
5.000
176
34.078
22.742
62
12.545
15.000
214
18.376
15.000
16
0.107
0.200
204
0.010
0.021
1538
0.003
0.020
285
1.653
1.500
792
0.820
1.500
318
2.471
2.000
1293
3.344
3.000
587
4.755
4.500
612
1.591
3.000
2308
9.935
3.000
255
4.691
3.000
2262
0.2510
0.2200
1.2210
238
4381
4619
20
97.8000
9.484
1.19
39.253
3S6F
63440
-3.000
0.055
1
15.9
3.6
99.2
0.525
1.190
1.220
2.5
16760
4623
0.525
1
3.6
98.0
0.450
1.220
1.250
2.9
16118
4448
0.450
1
3.6
98.1
0.407
1.250
1.290
3.2
15961
4385
0.407
1
3.6
98.5
0.330
1.290
1.330
3.9
15398
4234
0.330
1
3.6
98.6
0.283
1.330
1.370
4.6
15004
4121
0.283
1
3.6
98.7
0.246
1.370
1.420
5.3
14622
4011
0.246
1
3.6
99.0
0.194
1.420
1.480
6.7
14275
3909
0.194
1
3.7
99.1
0.156
1.480
1.540
8.5
13545
3711
0.156
1
3.6
99.5
0.119
1.540
1.600
11.0
13230
3627
0.119
1
3.6
99.8
0.101
1.600
1.680
13.2
12553
3438
0.101
1
3.7
99.7
0.086
1.680
1.770
15.7
12074
3313
0.086
1
3.6
99.9
0.065
1.770
1.880
21.0
11374
3121
0.065
1
3.6
99.6
0.051
1.880
2.010
27.0
10730
2946
0.051
1
3.6
99.9
0.042
2.010
2.170
32.9
10005
2754
0.042
1
3.6
99.9
0.039
2.170
2.380
37.0
9170
2534
0.039
1
3.6
99.8
0.036
2.380
2.660
41.0
8245
2302
0.036
1
3.6
99.9
0.034
2.660
3.070
44.5
7251
2041
0.034
1
3.6
99.8
0.028
3.070
3.760
51.1
6289
1767
0.028
1
3.6
99.9
0.026
3.760
5.320
54.3
4742
1366
0.026
1
3.5
99.5
0.031
5.320
39.253
51.6
2512
789
0.031
1
3.2
98.3
model building
D.C. & J.S. Richardson lab
molprobity@kinemage.biochem.duke.edu
http://kinemage.biochem.duke.edu/molprobity/
MolProbity
package
3beta29
data extraction
PDB
deposit@deposit.rcsb.org
June 10, 2010
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.10
phasing
George M. Sheldrick
gsheldr@shelx.uni-ac.gwdg.de
Fortran_77
http://shelx.uni-ac.gwdg.de/SHELX/
SHELX
package
phasing
Eric de La Fortelle
sharp-develop@globalphasing.com
http://www.globalphasing.com/sharp/
SHARP
package
data scaling
Wolfgang Kabsch
http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html
XSCALE
package
June 12
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
5.5.0110
data reduction
XDS
phasing
SHELXD
Crystal structure of a putative acetyltransferase (DR_1678) from Deinococcus radiodurans R1 at 1.19 A resolution
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT OF A DIMER AS A SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION.
A
SER
5
A
SER
6
HELX_P
A
ILE
9
A
ILE
10
5
1
5
A
THR
19
A
THR
20
HELX_P
A
LEU
23
A
LEU
24
5
2
5
A
THR
35
A
THR
36
HELX_P
A
ALA
46
A
ALA
47
1
3
12
A
GLY
88
A
GLY
89
HELX_P
A
GLY
102
A
GLY
103
1
4
15
A
ASP
112
A
ASP
113
HELX_P
A
ASP
114
A
ASP
115
5
5
3
A
VAL
115
A
VAL
116
HELX_P
A
LEU
122
A
LEU
123
1
6
8
A
ARG
134
A
ARG
135
HELX_P
A
GLN
138
A
GLN
139
5
7
5
covale
1.349
both
A
MSE
1
A
C
MSE
2
1_555
A
THR
2
A
N
THR
3
1_555
covale
1.337
both
A
LEU
93
A
C
LEU
94
1_555
A
MSE
94
A
N
MSE
95
1_555
covale
1.332
both
A
MSE
94
A
C
MSE
95
1_555
A
ARG
95
A
N
ARG
96
1_555
covale
1.331
both
A
TYR
105
A
C
TYR
106
1_555
A
MSE
106
A
N
MSE
107
1_555
covale
1.330
both
A
MSE
106
A
C
MSE
107
1_555
A
VAL
107
A
N
VAL
108
1_555
covale
1.321
both
A
ALA
129
A
C
ALA
130
1_555
A
MSE
130
A
N
MSE
131
1_555
covale
1.311
both
A
MSE
130
A
C
MSE
131
1_555
A
PHE
131
A
N
PHE
132
1_555
metalc
2.379
A
SER
86
A
O
SER
87
1_555
A
CA
201
D
CA
CA
1_555
metalc
2.437
A
SER
86
A
OG
SER
87
1_555
A
CA
201
D
CA
CA
1_555
metalc
2.326
A
CA
145
C
CA
CA
1_555
A
HOH
211
E
O
HOH
1_555
metalc
2.477
A
CA
145
C
CA
CA
1_555
A
HOH
221
E
O
HOH
1_555
metalc
2.458
A
CA
145
C
CA
CA
1_555
A
HOH
231
E
O
HOH
1_555
metalc
2.552
A
CA
145
C
CA
CA
1_555
A
HOH
242
E
O
HOH
1_555
metalc
2.407
A
CA
145
C
CA
CA
1_555
A
HOH
305
E
O
HOH
1_555
metalc
2.237
A
CA
145
C
CA
CA
1_555
A
HOH
385
E
O
HOH
1_555
metalc
2.416
A
CA
145
C
CA
CA
1_555
A
HOH
388
E
O
HOH
1_555
metalc
2.395
A
A
CA
201
D
CA
CA
1_555
A
HOH
243
E
O
HOH
1_555
metalc
2.305
A
CA
201
D
CA
CA
1_555
A
HOH
389
E
O
HOH
1_555
metalc
2.424
A
CA
201
D
CA
CA
1_555
A
HOH
390
E
O
HOH
1_555
metalc
2.448
A
CA
201
D
CA
CA
1_555
A
HOH
391
E
O
HOH
1_555
TRANSFERASE
Acyl-CoA N-acyltransferases, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, TRANSFERASE
Q9RTS8_DEIRA
UNP
1
1
Q9RTS8
MTQRSLADIQFQTTLEGVTPAQLGGFFEGWPNPPTPETLWRILDRAAVFVLARTPDGQVIGFVNALSDGILAASIPLLEV
QAGWRSLGLGSELMRRVLTELGDLYMVDLSCDDDVVPFYERLGLKRANAMFLRRYDNQAGIPAE
1
144
3S6F
1
144
Q9RTS8
A
1
2
145
1
expression tag
GLY
0
3S6F
A
Q9RTS8
UNP
1
4
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
A
GLN
10
A
GLN
11
A
GLN
12
A
GLN
13
A
VAL
48
A
VAL
49
A
ARG
53
A
ARG
54
A
VAL
59
A
VAL
60
A
SER
67
A
SER
68
A
LEU
78
A
LEU
79
A
VAL
80
A
VAL
81
A
GLN
10
A
GLN
11
A
GLN
12
A
GLN
13
A
VAL
48
A
VAL
49
A
ARG
53
A
ARG
54
A
VAL
59
A
VAL
60
A
SER
67
A
SER
68
A
ALA
72
A
ALA
73
A
SER
74
A
SER
75
A
MSE
106
A
MSE
107
A
ASP
108
A
ASP
109
BINDING SITE FOR RESIDUE COA A 200
A
COA
200
Software
28
BINDING SITE FOR RESIDUE CA A 145
A
CA
145
Software
8
BINDING SITE FOR RESIDUE CA A 201
A
CA
201
Software
6
A
GLN
3
A
GLN
4
28
6_555
A
LEU
78
A
LEU
79
28
1_555
A
GLU
79
A
GLU
80
28
1_555
A
VAL
80
A
VAL
81
28
1_555
A
ARG
85
A
ARG
86
28
1_555
A
SER
86
A
SER
87
28
1_555
A
LEU
87
A
LEU
88
28
1_555
A
GLY
88
A
GLY
89
28
1_555
A
LEU
89
A
LEU
90
28
1_555
A
GLY
90
A
GLY
91
28
1_555
A
SER
91
A
SER
92
28
1_555
A
CYS
111
A
CYS
112
28
1_555
A
ASP
114
A
ASP
115
28
1_555
A
VAL
115
A
VAL
116
28
1_555
A
PHE
118
A
PHE
119
28
1_555
A
TYR
119
A
TYR
120
28
1_555
A
ARG
121
A
ARG
122
28
1_555
A
HOH
206
E
HOH
28
1_555
A
HOH
214
E
HOH
28
1_555
A
HOH
222
E
HOH
28
1_555
A
HOH
243
E
HOH
28
1_555
A
HOH
263
E
HOH
28
6_554
A
HOH
294
E
HOH
28
1_555
A
HOH
341
E
HOH
28
1_555
A
HOH
371
E
HOH
28
1_555
A
HOH
391
E
HOH
28
1_555
A
HOH
410
E
HOH
28
1_555
A
HOH
417
E
HOH
28
1_555
A
HOH
211
E
HOH
8
1_555
A
HOH
221
E
HOH
8
1_555
A
HOH
231
E
HOH
8
1_555
A
HOH
242
E
HOH
8
1_555
A
HOH
305
E
HOH
8
1_555
A
HOH
339
E
HOH
8
4_566
A
HOH
385
E
HOH
8
1_555
A
HOH
388
E
HOH
8
1_555
A
PRO
31
A
PRO
32
6
6_554
A
SER
86
A
SER
87
6
1_555
A
HOH
243
E
HOH
6
1_555
A
HOH
389
E
HOH
6
1_555
A
HOH
390
E
HOH
6
1_555
A
HOH
391
E
HOH
6
1_555
20
C 2 2 21