0.018080 0.000000 0.000000 0.000000 0.017615 0.000000 0.000000 0.000000 0.009033 0.00000 0.00000 0.00000 Blanchard, H. Yu, X. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 55.310 56.770 110.700 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C6 H12 O6 180.156 beta-D-galactopyranose beta-D-galactose; D-galactose; galactose D-saccharide, beta linking C6 H12 O6 180.156 alpha-D-glucopyranose alpha-D-glucose; D-glucose; glucose D-saccharide, alpha linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C12 H21 N O10 339.296 n methyl 3,5-dideoxy-5-[(hydroxyacetyl)amino]-D-glycero-alpha-D-galacto-non-2-ulopyranosidonic acid methyl 3,5-dideoxy-5-[(hydroxyacetyl)amino]-D-glycero-alpha-D-galacto-non-2-ulosidonic acid; methyl 3,5-dideoxy-5-[(hydroxyacetyl)amino]-D-glycero-D-galacto-non-2-ulosidonic acid; methyl 3,5-dideoxy-5-[(hydroxyacetyl)amino]-D-glycero-galacto-non-2-ulosidonic acid D-saccharide C6 H14 O2 118.174 (4S)-2-METHYL-2,4-PENTANEDIOL non-polymer Na 1 22.990 SODIUM ION non-polymer C11 H19 N O10 325.269 N-glycolyl-alpha-neuraminic acid N-glycolylneuraminic acid; sialic acid; 3,5-dideoxy-5-[(hydroxyacetyl)amino]-D-glycero-alpha-D-galacto-non-2-ulopyranosonic acid D-saccharide, alpha linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 R C N 89 R C N 90 S C N 91 R C N 92 R C N 93 N C N 94 N O N 95 N O N 96 N O N 97 N O N 98 N O N 99 N O N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 S C N 113 R C N 114 S C N 115 S C N 116 R C N 117 N C N 118 N O N 119 N O N 120 N O N 121 N O N 122 N O N 123 N O N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N N N 137 S C N 138 N C N 139 N O N 140 N C N 141 N C N 142 N C N 143 N O N 144 N N N 145 N O N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N N N 157 S C N 158 N C N 159 N O N 160 N C N 161 N C N 162 N C N 163 N O N 164 N O N 165 N O N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N N N 176 N C N 177 N C N 178 N O N 179 N O N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N N N 186 S C N 187 N C N 188 N O N 189 N C Y 190 N C Y 191 N N Y 192 N C Y 193 N C Y 194 N N N 195 N O N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N O N 207 N H N 208 N H N 209 N N N 210 S C N 211 N C N 212 N O N 213 S C N 214 N C N 215 N C N 216 N C N 217 N O N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N N N 232 S C N 233 N C N 234 N O N 235 N C N 236 N C N 237 N C N 238 N C N 239 N O N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N N N 254 S C N 255 N C N 256 N O N 257 N C N 258 N C N 259 N C N 260 N C N 261 N N N 262 N O N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N N N 279 S C N 280 N C N 281 N O N 282 N C N 283 N C N 284 N S N 285 N C N 286 N O N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N C N 299 R C N 300 N O N 301 N C N 302 S C N 303 N O N 304 R C N 305 N N N 306 R C N 307 N O N 308 R C N 309 N O N 310 R C N 311 N O N 312 N C N 313 N O N 314 N C N 315 N O N 316 N C N 317 N O N 318 N C N 319 N O N 320 N O N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N C N 343 N C N 344 N O N 345 N C N 346 N C N 347 S C N 348 N O N 349 N C N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N NA N 365 N O N 366 N C N 367 R C N 368 N O N 369 R C N 370 N O N 371 R C N 372 N O N 373 R C N 374 N C N 375 N O N 376 N O N 377 N O N 378 N C N 379 S C N 380 N O N 381 R C N 382 N N N 383 N C N 384 N O N 385 N C N 386 N O N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N N N 407 S C N 408 N C N 409 N O N 410 N C Y 411 N C Y 412 N C Y 413 N C Y 414 N C Y 415 N C Y 416 N C N 417 N O N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N N N 430 S C N 431 N C N 432 N O N 433 N C N 434 N C N 435 N C N 436 N O N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N N N 447 S C N 448 N C N 449 N O N 450 N C N 451 N O N 452 N O N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N N N 461 S C N 462 N C N 463 N O N 464 R C N 465 N O N 466 N C N 467 N O N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N N N 478 S C N 479 N C N 480 N O N 481 N C Y 482 N C Y 483 N C Y 484 N C Y 485 N N Y 486 N C Y 487 N C Y 488 N C Y 489 N C Y 490 N C N 491 N O N 492 N H N 493 N H N 494 N H N 495 N H N 496 N H N 497 N H N 498 N H N 499 N H N 500 N H N 501 N H N 502 N H N 503 N H N 504 N N N 505 S C N 506 N C N 507 N O N 508 N C Y 509 N C Y 510 N C Y 511 N C Y 512 N C Y 513 N C Y 514 N C N 515 N O N 516 N O N 517 N H N 518 N H N 519 N H N 520 N H N 521 N H N 522 N H N 523 N H N 524 N H N 525 N H N 526 N H N 527 N H N 528 N N N 529 S C N 530 N C N 531 N O N 532 N C N 533 N C N 534 N C N 535 N O N 536 N H N 537 N H N 538 N H N 539 N H N 540 N H N 541 N H N 542 N H N 543 N H N 544 N H N 545 N H N 546 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N doub N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N doub N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N doub N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N doub N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N doub N 184 N sing N 185 N sing N 186 N sing N 187 N sing Y 188 N sing Y 189 N doub Y 190 N doub N 191 N sing Y 192 N sing N 193 N sing Y 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N doub N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N doub N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N doub N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N doub N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N doub N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N doub N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N doub N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N doub N 398 N sing N 399 N sing N 400 N sing N 401 N sing Y 402 N doub Y 403 N sing Y 404 N sing N 405 N sing Y 406 N doub N 407 N sing Y 408 N doub N 409 N sing Y 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N doub N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N doub N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N doub N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N doub N 467 N sing N 468 N sing N 469 N sing N 470 N sing Y 471 N doub Y 472 N sing Y 473 N sing N 474 N sing Y 475 N doub Y 476 N sing Y 477 N sing N 478 N sing Y 479 N sing Y 480 N doub N 481 N sing Y 482 N doub N 483 N sing Y 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N doub N 495 N sing N 496 N sing N 497 N sing N 498 N sing Y 499 N doub Y 500 N sing Y 501 N sing N 502 N sing Y 503 N doub N 504 N sing Y 505 N doub N 506 N sing Y 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N sing N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N doub N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing N 524 N sing N 525 N sing N 526 N sing N 527 N sing N 528 N sing N 529 N sing UK J.Mol.Biol. JMOBAK 0070 0022-2836 413 929 939 10.1016/j.jmb.2011.09.005 21945555 Novel structural insights into rotavirus recognition of ganglioside glycan receptors. 2011 10.2210/pdb3sis/pdb pdb_00003sis 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2010-07-23 ADSC QUANTUM 210r SINGLE WAVELENGTH x-ray 1 0.9537 1.0 MX1 Australian Synchrotron 0.9537 SYNCHROTRON AUSTRALIAN SYNCHROTRON BEAMLINE MX1 18459.516 Outer capsid protein VP4 Outer capsid protein VP8* (UNP residues 64-224) yes 2 man polymer 649.551 N-glycolyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose 1 man branched 339.296 methyl 3,5-dideoxy-5-[(hydroxyacetyl)amino]-D-glycero-alpha-D-galacto-non-2-ulopyranosidonic acid 1 man non-polymer 22.990 SODIUM ION 2 syn non-polymer 118.174 (4S)-2-METHYL-2,4-PENTANEDIOL 1 syn non-polymer 18.015 water 141 nat water VP8* carbohydrate recognition protein no no GSLLDGPYQPTTFNPPTSYWILLAPTVEGVVIQGTNNIDRWLATILIEPNVQTTNRIYNLFGQQVTLSVENTSQTQWKFI DVSKTTPTGNYTQHGPLFSTPKLYAVMKFSGRIYTYNGTTPNATTGYYSTTNYDTVNMTSFCDFYIIPRNQEEKCTEYIN HGL GSLLDGPYQPTTFNPPTSYWILLAPTVEGVVIQGTNNIDRWLATILIEPNVQTTNRIYNLFGQQVTLSVENTSQTQWKFI DVSKTTPTGNYTQHGPLFSTPKLYAVMKFSGRIYTYNGTTPNATTGYYSTTNYDTVNMTSFCDFYIIPRNQEEKCTEYIN HGL A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n RV-A CRW-8 sample 31578 Porcine rotavirus 469008 Escherichia coli BL21(DE3) plasmid p-GEX 1 2.35 47.74 VAPOR DIFFUSION, HANGING DROP 7.5 15-20 mg/mL protein, 65-75% MPD, 0.1 M HEPES, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 atom_site chem_comp entity pdbx_branch_scheme pdbx_chem_comp_identifier pdbx_entity_branch pdbx_entity_branch_descriptor pdbx_entity_branch_link pdbx_entity_branch_list pdbx_entity_nonpoly pdbx_nonpoly_scheme pdbx_struct_assembly_gen pdbx_struct_conn_angle pdbx_unobs_or_zero_occ_atoms struct_asym struct_conn struct_ref_seq_dif struct_site struct_site_gen chem_comp chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Carbohydrate remediation repository Remediation Database references Database references Advisory Atomic model Data collection Database references Derived calculations Non-polymer description Structure summary Data collection Database references Refinement description Structure summary 1 0 2011-09-28 1 1 2011-10-12 1 2 2011-11-30 2 0 2020-07-29 2 1 2023-09-13 _atom_site.B_iso_or_equiv _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.label_asym_id _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_entity_id _atom_site.type_symbol _chem_comp.formula _chem_comp.formula_weight _chem_comp.id _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.type _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.conn_type_id _struct_conn.id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_ref_seq_dif.details _chem_comp.pdbx_synonyms _database_2.pdbx_DOI _database_2.pdbx_database_accession B GLC 6537 n C GLC 1 B GAL 6536 n C GAL 2 B MN0 6535 n C NGC 3 DGalpb b-D-galactopyranose b-D-Galp Gal DGlcpa a-D-glucopyranose a-D-Glcp Glc 2-O-methyl-5-N-glycolyl-a-D-neuraminic acid DNeup5Gca N-glycolyl-a-D-neuraminic acid a-D-Neup5Gc Neu5Gc Rotavirus CRW-8 VP8* in complex with monosaccharide aMeNeu5Ac Porcine CRW-8 Rotavirus VP8* in complex with aceramido-GM3 RCSB Y RCSB 2011-06-20 REL REL oligosaccharide DNeup5Gca2-3DGalpb1-4DGlcpa1-ROH 2 GMML 1.0 Glycam Condensed Sequence WURCS=2.0/3,3,2/[a2122h-1a_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCCO/3=O]/1-2-3/a4-b1_b3-c2 2 PDB2Glycan 1.1.0 WURCS [][a-D-Glcp]{[(4+1)][b-D-Galp]{[(3+2)][a-D-Neup5Gc]{}}} 2 PDB-CARE LINUCS C1 O4 GAL GLC 2 1 2 O1 HO4 sing C2 O3 NGC GAL 3 2 2 O2 HO3 sing n n n MN0 methyl 3,5-dideoxy-5-[(hydroxyacetyl)amino]-D-glycero-alpha-D-galacto-non-2-ulopyranosidonic acid NA SODIUM ION MPD (4S)-2-METHYL-2,4-PENTANEDIOL HOH water 2I2S PDB ENTRY 2I2S PDB experimental model MN0 6535 3 MN0 MN0 6535 A NA 3000 4 NA NA 3000 A NA 3001 4 NA NA 3001 B MPD 4210 5 MPD MPD 4210 B HOH 2 6 HOH HOH 2 A HOH 4 6 HOH HOH 4 A HOH 5 6 HOH HOH 5 A HOH 7 6 HOH HOH 7 A HOH 8 6 HOH HOH 8 A HOH 11 6 HOH HOH 11 A HOH 12 6 HOH HOH 12 A HOH 13 6 HOH HOH 13 A HOH 15 6 HOH HOH 15 A HOH 16 6 HOH HOH 16 A HOH 17 6 HOH HOH 17 A HOH 21 6 HOH HOH 21 A HOH 22 6 HOH HOH 22 A HOH 24 6 HOH HOH 24 A HOH 28 6 HOH HOH 28 A HOH 30 6 HOH HOH 30 A HOH 35 6 HOH HOH 35 A HOH 37 6 HOH HOH 37 A HOH 40 6 HOH HOH 40 A HOH 42 6 HOH HOH 42 A HOH 43 6 HOH HOH 43 A HOH 44 6 HOH HOH 44 A HOH 45 6 HOH HOH 45 A HOH 48 6 HOH HOH 48 A HOH 51 6 HOH HOH 51 A HOH 57 6 HOH HOH 57 A HOH 61 6 HOH HOH 61 A HOH 225 6 HOH HOH 225 A HOH 226 6 HOH HOH 226 A HOH 227 6 HOH HOH 227 A HOH 228 6 HOH HOH 228 A HOH 229 6 HOH HOH 229 A HOH 230 6 HOH HOH 230 A HOH 231 6 HOH HOH 231 A HOH 232 6 HOH HOH 232 A HOH 233 6 HOH HOH 233 A HOH 234 6 HOH HOH 234 A HOH 235 6 HOH HOH 235 A HOH 236 6 HOH HOH 236 A HOH 237 6 HOH HOH 237 A HOH 238 6 HOH HOH 238 A HOH 239 6 HOH HOH 239 A HOH 240 6 HOH HOH 240 A HOH 241 6 HOH HOH 241 A HOH 242 6 HOH HOH 242 A HOH 243 6 HOH HOH 243 A HOH 244 6 HOH HOH 244 A HOH 245 6 HOH HOH 245 A HOH 246 6 HOH HOH 246 A HOH 247 6 HOH HOH 247 A HOH 248 6 HOH HOH 248 A HOH 249 6 HOH HOH 249 A HOH 250 6 HOH HOH 250 A HOH 251 6 HOH HOH 251 A HOH 252 6 HOH HOH 252 A HOH 253 6 HOH HOH 253 A HOH 254 6 HOH HOH 254 A HOH 255 6 HOH HOH 255 A HOH 256 6 HOH HOH 256 A HOH 257 6 HOH HOH 257 A HOH 258 6 HOH HOH 258 A HOH 259 6 HOH HOH 259 A HOH 260 6 HOH HOH 260 A HOH 261 6 HOH HOH 261 A HOH 262 6 HOH HOH 262 A HOH 263 6 HOH HOH 263 A HOH 264 6 HOH HOH 264 A HOH 265 6 HOH HOH 265 A HOH 266 6 HOH HOH 266 A HOH 267 6 HOH HOH 267 A HOH 268 6 HOH HOH 268 A HOH 269 6 HOH HOH 269 A HOH 270 6 HOH HOH 270 A HOH 271 6 HOH HOH 271 A HOH 272 6 HOH HOH 272 A HOH 273 6 HOH HOH 273 A HOH 274 6 HOH HOH 274 A HOH 1 6 HOH HOH 1 B HOH 6 6 HOH HOH 6 B HOH 10 6 HOH HOH 10 B HOH 14 6 HOH HOH 14 B HOH 18 6 HOH HOH 18 B HOH 19 6 HOH HOH 19 B HOH 20 6 HOH HOH 20 B HOH 23 6 HOH HOH 23 B HOH 26 6 HOH HOH 26 B HOH 27 6 HOH HOH 27 B HOH 29 6 HOH HOH 29 B HOH 32 6 HOH HOH 32 B HOH 33 6 HOH HOH 33 B HOH 34 6 HOH HOH 34 B HOH 36 6 HOH HOH 36 B HOH 38 6 HOH HOH 38 B HOH 41 6 HOH HOH 41 B HOH 46 6 HOH HOH 46 B HOH 47 6 HOH HOH 47 B HOH 49 6 HOH HOH 49 B HOH 50 6 HOH HOH 50 B HOH 52 6 HOH HOH 52 B HOH 55 6 HOH HOH 55 B HOH 56 6 HOH HOH 56 B HOH 58 6 HOH HOH 58 B HOH 59 6 HOH HOH 59 B HOH 225 6 HOH HOH 225 B HOH 226 6 HOH HOH 226 B HOH 227 6 HOH HOH 227 B HOH 228 6 HOH HOH 228 B HOH 229 6 HOH HOH 229 B HOH 230 6 HOH HOH 230 B HOH 231 6 HOH HOH 231 B HOH 232 6 HOH HOH 232 B HOH 233 6 HOH HOH 233 B HOH 234 6 HOH HOH 234 B HOH 235 6 HOH HOH 235 B HOH 236 6 HOH HOH 236 B HOH 237 6 HOH HOH 237 B HOH 238 6 HOH HOH 238 B HOH 239 6 HOH HOH 239 B HOH 240 6 HOH HOH 240 B HOH 241 6 HOH HOH 241 B HOH 242 6 HOH HOH 242 B HOH 243 6 HOH HOH 243 B HOH 244 6 HOH HOH 244 B HOH 245 6 HOH HOH 245 B HOH 246 6 HOH HOH 246 B HOH 247 6 HOH HOH 247 B HOH 248 6 HOH HOH 248 B HOH 249 6 HOH HOH 249 B HOH 250 6 HOH HOH 250 B HOH 251 6 HOH HOH 251 B HOH 252 6 HOH HOH 252 B HOH 253 6 HOH HOH 253 B HOH 254 6 HOH HOH 254 B HOH 255 6 HOH HOH 255 B HOH 256 6 HOH HOH 256 B HOH 257 6 HOH HOH 257 B HOH 258 6 HOH HOH 258 B HOH 259 6 HOH HOH 259 B HOH 260 6 HOH HOH 260 B HOH 261 6 HOH HOH 261 B HOH 262 6 HOH HOH 262 B GLY 62 n 1 GLY 62 A SER 63 n 2 SER 63 A LEU 64 n 3 LEU 64 A LEU 65 n 4 LEU 65 A ASP 66 n 5 ASP 66 A GLY 67 n 6 GLY 67 A PRO 68 n 7 PRO 68 A TYR 69 n 8 TYR 69 A GLN 70 n 9 GLN 70 A PRO 71 n 10 PRO 71 A THR 72 n 11 THR 72 A THR 73 n 12 THR 73 A PHE 74 n 13 PHE 74 A ASN 75 n 14 ASN 75 A PRO 76 n 15 PRO 76 A PRO 77 n 16 PRO 77 A THR 78 n 17 THR 78 A SER 79 n 18 SER 79 A TYR 80 n 19 TYR 80 A TRP 81 n 20 TRP 81 A ILE 82 n 21 ILE 82 A LEU 83 n 22 LEU 83 A LEU 84 n 23 LEU 84 A ALA 85 n 24 ALA 85 A PRO 86 n 25 PRO 86 A THR 87 n 26 THR 87 A VAL 88 n 27 VAL 88 A GLU 89 n 28 GLU 89 A GLY 90 n 29 GLY 90 A VAL 91 n 30 VAL 91 A VAL 92 n 31 VAL 92 A ILE 93 n 32 ILE 93 A GLN 94 n 33 GLN 94 A GLY 95 n 34 GLY 95 A THR 96 n 35 THR 96 A ASN 97 n 36 ASN 97 A ASN 98 n 37 ASN 98 A ILE 99 n 38 ILE 99 A ASP 100 n 39 ASP 100 A ARG 101 n 40 ARG 101 A TRP 102 n 41 TRP 102 A LEU 103 n 42 LEU 103 A ALA 104 n 43 ALA 104 A THR 105 n 44 THR 105 A ILE 106 n 45 ILE 106 A LEU 107 n 46 LEU 107 A ILE 108 n 47 ILE 108 A GLU 109 n 48 GLU 109 A PRO 110 n 49 PRO 110 A ASN 111 n 50 ASN 111 A VAL 112 n 51 VAL 112 A GLN 113 n 52 GLN 113 A THR 114 n 53 THR 114 A THR 115 n 54 THR 115 A ASN 116 n 55 ASN 116 A ARG 117 n 56 ARG 117 A ILE 118 n 57 ILE 118 A TYR 119 n 58 TYR 119 A ASN 120 n 59 ASN 120 A LEU 121 n 60 LEU 121 A PHE 122 n 61 PHE 122 A GLY 123 n 62 GLY 123 A GLN 124 n 63 GLN 124 A GLN 125 n 64 GLN 125 A VAL 126 n 65 VAL 126 A THR 127 n 66 THR 127 A LEU 128 n 67 LEU 128 A SER 129 n 68 SER 129 A VAL 130 n 69 VAL 130 A GLU 131 n 70 GLU 131 A ASN 132 n 71 ASN 132 A THR 133 n 72 THR 133 A SER 134 n 73 SER 134 A GLN 135 n 74 GLN 135 A THR 136 n 75 THR 136 A GLN 137 n 76 GLN 137 A TRP 138 n 77 TRP 138 A LYS 139 n 78 LYS 139 A PHE 140 n 79 PHE 140 A ILE 141 n 80 ILE 141 A ASP 142 n 81 ASP 142 A VAL 143 n 82 VAL 143 A SER 144 n 83 SER 144 A LYS 145 n 84 LYS 145 A THR 146 n 85 THR 146 A THR 147 n 86 THR 147 A PRO 148 n 87 PRO 148 A THR 149 n 88 THR 149 A GLY 150 n 89 GLY 150 A ASN 151 n 90 ASN 151 A TYR 152 n 91 TYR 152 A THR 153 n 92 THR 153 A GLN 154 n 93 GLN 154 A HIS 155 n 94 HIS 155 A GLY 156 n 95 GLY 156 A PRO 157 n 96 PRO 157 A LEU 158 n 97 LEU 158 A PHE 159 n 98 PHE 159 A SER 160 n 99 SER 160 A THR 161 n 100 THR 161 A PRO 162 n 101 PRO 162 A LYS 163 n 102 LYS 163 A LEU 164 n 103 LEU 164 A TYR 165 n 104 TYR 165 A ALA 166 n 105 ALA 166 A VAL 167 n 106 VAL 167 A MET 168 n 107 MET 168 A LYS 169 n 108 LYS 169 A PHE 170 n 109 PHE 170 A SER 171 n 110 SER 171 A GLY 172 n 111 GLY 172 A ARG 173 n 112 ARG 173 A ILE 174 n 113 ILE 174 A TYR 175 n 114 TYR 175 A THR 176 n 115 THR 176 A TYR 177 n 116 TYR 177 A ASN 178 n 117 ASN 178 A GLY 179 n 118 GLY 179 A THR 180 n 119 THR 180 A THR 181 n 120 THR 181 A PRO 182 n 121 PRO 182 A ASN 183 n 122 ASN 183 A ALA 184 n 123 ALA 184 A THR 185 n 124 THR 185 A THR 186 n 125 THR 186 A GLY 187 n 126 GLY 187 A TYR 188 n 127 TYR 188 A TYR 189 n 128 TYR 189 A SER 190 n 129 SER 190 A THR 191 n 130 THR 191 A THR 192 n 131 THR 192 A ASN 193 n 132 ASN 193 A TYR 194 n 133 TYR 194 A ASP 195 n 134 ASP 195 A THR 196 n 135 THR 196 A VAL 197 n 136 VAL 197 A ASN 198 n 137 ASN 198 A MET 199 n 138 MET 199 A THR 200 n 139 THR 200 A SER 201 n 140 SER 201 A PHE 202 n 141 PHE 202 A CYS 203 n 142 CYS 203 A ASP 204 n 143 ASP 204 A PHE 205 n 144 PHE 205 A TYR 206 n 145 TYR 206 A ILE 207 n 146 ILE 207 A ILE 208 n 147 ILE 208 A PRO 209 n 148 PRO 209 A ARG 210 n 149 ARG 210 A ASN 211 n 150 ASN 211 A GLN 212 n 151 GLN 212 A GLU 213 n 152 GLU 213 A GLU 214 n 153 GLU 214 A LYS 215 n 154 LYS 215 A CYS 216 n 155 CYS 216 A THR 217 n 156 THR 217 A GLU 218 n 157 GLU 218 A TYR 219 n 158 TYR 219 A ILE 220 n 159 ILE 220 A ASN 221 n 160 ASN 221 A HIS 222 n 161 HIS 222 A GLY 223 n 162 GLY 223 A LEU 224 n 163 LEU 224 A n 1 62 B n 2 63 B n 3 64 B n 4 65 B ASP 66 n 5 ASP 66 B GLY 67 n 6 GLY 67 B PRO 68 n 7 PRO 68 B TYR 69 n 8 TYR 69 B GLN 70 n 9 GLN 70 B PRO 71 n 10 PRO 71 B THR 72 n 11 THR 72 B THR 73 n 12 THR 73 B PHE 74 n 13 PHE 74 B ASN 75 n 14 ASN 75 B PRO 76 n 15 PRO 76 B PRO 77 n 16 PRO 77 B THR 78 n 17 THR 78 B SER 79 n 18 SER 79 B TYR 80 n 19 TYR 80 B TRP 81 n 20 TRP 81 B ILE 82 n 21 ILE 82 B LEU 83 n 22 LEU 83 B LEU 84 n 23 LEU 84 B ALA 85 n 24 ALA 85 B PRO 86 n 25 PRO 86 B THR 87 n 26 THR 87 B VAL 88 n 27 VAL 88 B GLU 89 n 28 GLU 89 B GLY 90 n 29 GLY 90 B VAL 91 n 30 VAL 91 B VAL 92 n 31 VAL 92 B ILE 93 n 32 ILE 93 B GLN 94 n 33 GLN 94 B GLY 95 n 34 GLY 95 B THR 96 n 35 THR 96 B ASN 97 n 36 ASN 97 B ASN 98 n 37 ASN 98 B ILE 99 n 38 ILE 99 B ASP 100 n 39 ASP 100 B ARG 101 n 40 ARG 101 B TRP 102 n 41 TRP 102 B LEU 103 n 42 LEU 103 B ALA 104 n 43 ALA 104 B THR 105 n 44 THR 105 B ILE 106 n 45 ILE 106 B LEU 107 n 46 LEU 107 B ILE 108 n 47 ILE 108 B GLU 109 n 48 GLU 109 B PRO 110 n 49 PRO 110 B ASN 111 n 50 ASN 111 B VAL 112 n 51 VAL 112 B GLN 113 n 52 GLN 113 B THR 114 n 53 THR 114 B THR 115 n 54 THR 115 B ASN 116 n 55 ASN 116 B ARG 117 n 56 ARG 117 B ILE 118 n 57 ILE 118 B TYR 119 n 58 TYR 119 B ASN 120 n 59 ASN 120 B LEU 121 n 60 LEU 121 B PHE 122 n 61 PHE 122 B GLY 123 n 62 GLY 123 B GLN 124 n 63 GLN 124 B GLN 125 n 64 GLN 125 B VAL 126 n 65 VAL 126 B THR 127 n 66 THR 127 B LEU 128 n 67 LEU 128 B SER 129 n 68 SER 129 B VAL 130 n 69 VAL 130 B GLU 131 n 70 GLU 131 B ASN 132 n 71 ASN 132 B THR 133 n 72 THR 133 B SER 134 n 73 SER 134 B GLN 135 n 74 GLN 135 B THR 136 n 75 THR 136 B GLN 137 n 76 GLN 137 B TRP 138 n 77 TRP 138 B LYS 139 n 78 LYS 139 B PHE 140 n 79 PHE 140 B ILE 141 n 80 ILE 141 B ASP 142 n 81 ASP 142 B VAL 143 n 82 VAL 143 B SER 144 n 83 SER 144 B LYS 145 n 84 LYS 145 B THR 146 n 85 THR 146 B THR 147 n 86 THR 147 B PRO 148 n 87 PRO 148 B THR 149 n 88 THR 149 B GLY 150 n 89 GLY 150 B ASN 151 n 90 ASN 151 B TYR 152 n 91 TYR 152 B THR 153 n 92 THR 153 B GLN 154 n 93 GLN 154 B HIS 155 n 94 HIS 155 B GLY 156 n 95 GLY 156 B PRO 157 n 96 PRO 157 B LEU 158 n 97 LEU 158 B PHE 159 n 98 PHE 159 B SER 160 n 99 SER 160 B THR 161 n 100 THR 161 B PRO 162 n 101 PRO 162 B LYS 163 n 102 LYS 163 B LEU 164 n 103 LEU 164 B TYR 165 n 104 TYR 165 B ALA 166 n 105 ALA 166 B VAL 167 n 106 VAL 167 B MET 168 n 107 MET 168 B LYS 169 n 108 LYS 169 B PHE 170 n 109 PHE 170 B SER 171 n 110 SER 171 B GLY 172 n 111 GLY 172 B ARG 173 n 112 ARG 173 B ILE 174 n 113 ILE 174 B TYR 175 n 114 TYR 175 B THR 176 n 115 THR 176 B TYR 177 n 116 TYR 177 B ASN 178 n 117 ASN 178 B GLY 179 n 118 GLY 179 B THR 180 n 119 THR 180 B THR 181 n 120 THR 181 B PRO 182 n 121 PRO 182 B ASN 183 n 122 ASN 183 B ALA 184 n 123 ALA 184 B THR 185 n 124 THR 185 B THR 186 n 125 THR 186 B GLY 187 n 126 GLY 187 B TYR 188 n 127 TYR 188 B TYR 189 n 128 TYR 189 B SER 190 n 129 SER 190 B THR 191 n 130 THR 191 B THR 192 n 131 THR 192 B ASN 193 n 132 ASN 193 B TYR 194 n 133 TYR 194 B ASP 195 n 134 ASP 195 B THR 196 n 135 THR 196 B VAL 197 n 136 VAL 197 B ASN 198 n 137 ASN 198 B MET 199 n 138 MET 199 B THR 200 n 139 THR 200 B SER 201 n 140 SER 201 B PHE 202 n 141 PHE 202 B CYS 203 n 142 CYS 203 B ASP 204 n 143 ASP 204 B PHE 205 n 144 PHE 205 B TYR 206 n 145 TYR 206 B ILE 207 n 146 ILE 207 B ILE 208 n 147 ILE 208 B PRO 209 n 148 PRO 209 B ARG 210 n 149 ARG 210 B ASN 211 n 150 ASN 211 B GLN 212 n 151 GLN 212 B GLU 213 n 152 GLU 213 B GLU 214 n 153 GLU 214 B LYS 215 n 154 LYS 215 B CYS 216 n 155 CYS 216 B THR 217 n 156 THR 217 B GLU 218 n 157 GLU 218 B TYR 219 n 158 TYR 219 B ILE 220 n 159 ILE 220 B ASN 221 n 160 ASN 221 B HIS 222 n 161 HIS 222 B GLY 223 n 162 GLY 223 B LEU 224 n 163 LEU 224 B author_and_software_defined_assembly PISA 1 monomeric author_and_software_defined_assembly PISA 1 monomeric A ASP 142 A OD2 ASP 81 1_555 A NA 3000 E NA NA 1_555 A GLY 156 A O GLY 95 1_555 97.4 A ASP 142 A OD2 ASP 81 1_555 A NA 3000 E NA NA 1_555 A TYR 165 A OH TYR 104 1_555 73.5 A GLY 156 A O GLY 95 1_555 A NA 3000 E NA NA 1_555 A TYR 165 A OH TYR 104 1_555 120.4 A ASP 142 A OD2 ASP 81 1_555 A NA 3000 E NA NA 1_555 A THR 176 A OG1 THR 115 1_555 60.8 A GLY 156 A O GLY 95 1_555 A NA 3000 E NA NA 1_555 A THR 176 A OG1 THR 115 1_555 150.3 A TYR 165 A OH TYR 104 1_555 A NA 3000 E NA NA 1_555 A THR 176 A OG1 THR 115 1_555 75.1 A ASP 142 A OD2 ASP 81 1_555 A NA 3000 E NA NA 1_555 A TYR 177 A O TYR 116 1_555 152.6 A GLY 156 A O GLY 95 1_555 A NA 3000 E NA NA 1_555 A TYR 177 A O TYR 116 1_555 109.5 A TYR 165 A OH TYR 104 1_555 A NA 3000 E NA NA 1_555 A TYR 177 A O TYR 116 1_555 88.4 A THR 176 A OG1 THR 115 1_555 A NA 3000 E NA NA 1_555 A TYR 177 A O TYR 116 1_555 95.2 B ASP 142 B OD2 ASP 81 1_555 B NA 3001 F NA NA 1_555 B GLY 156 B O GLY 95 1_555 92.8 B ASP 142 B OD2 ASP 81 1_555 B NA 3001 F NA NA 1_555 B TYR 165 B OH TYR 104 1_555 71.8 B GLY 156 B O GLY 95 1_555 B NA 3001 F NA NA 1_555 B TYR 165 B OH TYR 104 1_555 118.2 B ASP 142 B OD2 ASP 81 1_555 B NA 3001 F NA NA 1_555 B THR 176 B OG1 THR 115 1_555 60.9 B GLY 156 B O GLY 95 1_555 B NA 3001 F NA NA 1_555 B THR 176 B OG1 THR 115 1_555 148.3 B TYR 165 B OH TYR 104 1_555 B NA 3001 F NA NA 1_555 B THR 176 B OG1 THR 115 1_555 72.7 B ASP 142 B OD2 ASP 81 1_555 B NA 3001 F NA NA 1_555 B TYR 177 B O TYR 116 1_555 154.8 B GLY 156 B O GLY 95 1_555 B NA 3001 F NA NA 1_555 B TYR 177 B O TYR 116 1_555 112.0 B TYR 165 B OH TYR 104 1_555 B NA 3001 F NA NA 1_555 B TYR 177 B O TYR 116 1_555 91.5 B THR 176 B OG1 THR 115 1_555 B NA 3001 F NA NA 1_555 B TYR 177 B O TYR 116 1_555 96.6 B ASP 142 B OD2 ASP 81 1_555 B NA 3001 F NA NA 1_555 B ASN 178 B B OD1 ASN 117 1_555 113.6 B GLY 156 B O GLY 95 1_555 B NA 3001 F NA NA 1_555 B ASN 178 B B OD1 ASN 117 1_555 88.8 B TYR 165 B OH TYR 104 1_555 B NA 3001 F NA NA 1_555 B ASN 178 B B OD1 ASN 117 1_555 152.7 B THR 176 B OG1 THR 115 1_555 B NA 3001 F NA NA 1_555 B ASN 178 B B OD1 ASN 117 1_555 86.5 B TYR 177 B O TYR 116 1_555 B NA 3001 F NA NA 1_555 B ASN 178 B B OD1 ASN 117 1_555 73.2 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N TYR 69 A N TYR 8 A O PHE 205 A O PHE 144 A O ILE 208 A O ILE 147 A N TRP 81 A N TRP 20 A N LEU 84 A N LEU 23 A O TYR 165 A O TYR 104 A N MET 168 A N MET 107 A O TYR 175 A O TYR 114 A O GLY 179 A O GLY 118 A N PRO 157 A N PRO 96 A O SER 160 A O SER 99 A N TRP 138 A N TRP 77 A O LYS 139 A O LYS 78 A N ILE 108 A N ILE 47 A O THR 105 A O THR 44 A N VAL 92 A N VAL 31 A N GLN 94 A N GLN 33 A O THR 200 A O THR 139 A O MET 199 A O MET 138 A N PHE 74 A N PHE 13 A N TYR 69 A N TYR 8 A O PHE 205 A O PHE 144 A O ILE 208 A O ILE 147 A N TRP 81 A N TRP 20 A N LEU 84 A N LEU 23 A O TYR 165 A O TYR 104 A N MET 168 A N MET 107 A O TYR 175 A O TYR 114 A N ASN 178 A N ASN 117 A O THR 185 A O THR 124 A N TYR 119 A N TYR 58 A O VAL 126 A O VAL 65 B N PHE 74 B N PHE 13 B O MET 199 B O MET 138 B O THR 200 B O THR 139 B N GLN 94 B N GLN 33 B N VAL 92 B N VAL 31 B O THR 105 B O THR 44 B N ALA 104 B N ALA 43 B O VAL 143 B O VAL 82 B N TRP 138 B N TRP 77 B O SER 160 B O SER 99 B N PHE 159 B N PHE 98 B O GLY 179 B O GLY 118 B N ASN 178 B N ASN 117 B O THR 185 B O THR 124 B N PHE 74 B N PHE 13 B O MET 199 B O MET 138 B O THR 200 B O THR 139 B N GLN 94 B N GLN 33 B N VAL 92 B N VAL 31 B O THR 105 B O THR 44 B N ALA 104 B N ALA 43 B O VAL 143 B O VAL 82 B N TRP 138 B N TRP 77 B O SER 160 B O SER 99 B N PHE 159 B N PHE 98 B O GLY 179 B O GLY 118 B O TYR 175 B O TYR 114 B N MET 168 B N MET 107 B O TYR 165 B O TYR 104 B N LEU 84 B N LEU 23 B N TRP 81 B N TRP 20 B O ILE 208 B O ILE 147 B N VAL 112 B N VAL 51 B O ASN 132 B O ASN 71 1 B GLY 62 B GLY 1 1 Y 1 B SER 63 B SER 2 1 Y 1 B LEU 64 B LEU 3 1 Y 1 B LEU 65 B LEU 4 1 Y 1 A A O O HOH HOH 13 243 2.17 1 B B OE2 OH GLU TYR 131 194 2.15 1_555 3_555 1 A ILE 99 -128.82 -57.96 1 A ASP 100 -152.59 15.26 1 A THR 114 -38.26 124.88 1 A ASN 183 -119.29 51.33 1 A ASN 211 -57.45 -8.61 1 B ILE 99 -134.04 -66.00 1 B ASP 100 -149.49 20.62 1 B ASN 111 63.62 64.59 1 B PHE 122 64.89 -84.47 28.401 0.00 0.00 0.00 0.00 0.00 0.01 0.946 0.924 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY 0.23837 0.19297 0.20 0.19522 2.20 39.12 929 18082 17106 5.2 98.42 5.926 0.151 RANDOM 1 THROUGHOUT 2.0 MOLECULAR REPLACEMENT 0.303 0.218 0.80 0.80 1.40 PDB ENTRY 2I2S MAXIMUM LIKELIHOOD MASK 2.20 39.12 141 2800 77 0 2582 0.008 0.022 2756 1.162 1.977 3797 6.000 5.000 326 32.445 24.921 126 13.558 15.000 400 11.157 15.000 8 0.071 0.200 441 0.005 0.021 2102 0.468 1.500 1620 0.869 2.000 2680 1.096 3.000 1136 1.862 4.500 1114 0.345 0.258 2.257 72 1097 20 87.96 2.2 39.62 3SIS 18082 2.0 2.0 0.054 1 10.1 11.72 98.5 0.258 2.2 2.32 1.5 1 3.77 91.8 data collection Blu-Ice phasing AMoRE refinement REFMAC 5.5.0110 data reduction MOSFLM data scaling SCALA Crystal structure of Porcine CRW-8 Rotavirus VP8* in complex with aceramido-GM3_Gc 1 N N 1 N N 2 N N 3 N N 4 N N 4 N N 5 N N 6 N N 6 N N A ASN 193 A ASN 132 HELX_P A VAL 197 A VAL 136 5 1 5 A GLN 212 A GLN 151 HELX_P A GLY 223 A GLY 162 1 2 12 B ASN 193 B ASN 132 HELX_P B VAL 197 B VAL 136 5 3 5 B GLN 212 B GLN 151 HELX_P B GLY 223 B GLY 162 1 4 12 covale 1.451 both C GLC 1 C O4 GLC 1_555 C GAL 2 C C1 GAL 1_555 covale 1.447 both C GAL 2 C O3 GAL 1_555 C NGC 3 C C2 NGC 1_555 metalc 2.655 A ASP 142 A OD2 ASP 81 1_555 A NA 3000 E NA NA 1_555 metalc 2.255 A GLY 156 A O GLY 95 1_555 A NA 3000 E NA NA 1_555 metalc 2.421 A TYR 165 A OH TYR 104 1_555 A NA 3000 E NA NA 1_555 metalc 2.607 A THR 176 A OG1 THR 115 1_555 A NA 3000 E NA NA 1_555 metalc 2.342 A TYR 177 A O TYR 116 1_555 A NA 3000 E NA NA 1_555 metalc 2.526 B ASP 142 B OD2 ASP 81 1_555 B NA 3001 F NA NA 1_555 metalc 2.263 B GLY 156 B O GLY 95 1_555 B NA 3001 F NA NA 1_555 metalc 2.345 B TYR 165 B OH TYR 104 1_555 B NA 3001 F NA NA 1_555 metalc 2.728 B THR 176 B OG1 THR 115 1_555 B NA 3001 F NA NA 1_555 metalc 2.262 B TYR 177 B O TYR 116 1_555 B NA 3001 F NA NA 1_555 metalc 2.412 B B ASN 178 B OD1 ASN 117 1_555 B NA 3001 F NA NA 1_555 SUGAR BINDING PROTEIN, VIRAL PROTEIN beta sandwich, lectin, GM3, SUGAR BINDING PROTEIN, VIRAL PROTEIN A GLY 67 A GLY 6 1 A PRO 68 A PRO 7 4.57 A THR 181 A THR 120 1 A PRO 182 A PRO 121 7.77 B GLY 67 B GLY 6 1 B PRO 68 B PRO 7 4.75 B THR 181 B THR 120 1 B PRO 182 B PRO 121 4.51 VP4_ROTP3 UNP 1 64 P0C6Y8 LLDGPYRPTTFNPPTSYWVLLAPTVEGVVIQGTNNIDRWLATILIEPNVQTTNRIYNLFGQQVTLSVENTSQTQWKFIDV SKTTPTGSYTQHGPLFSTPKLYAVMKFSGRIYTYNGTTPNATTGYYSTTNYDTVNMTLFCDFYIIPRNQEEKCTEYINHG L 64 224 3SIS 64 224 P0C6Y8 A 1 3 163 64 224 3SIS 64 224 P0C6Y8 B 1 3 163 1 expression tag GLY 62 3SIS A P0C6Y8 UNP 1 1 expression tag SER 63 3SIS A P0C6Y8 UNP 2 1 ARG engineered mutation GLN 70 3SIS A P0C6Y8 UNP 70 9 1 VAL engineered mutation ILE 82 3SIS A P0C6Y8 UNP 82 21 1 SER engineered mutation ASN 151 3SIS A P0C6Y8 UNP 151 90 1 LEU engineered mutation SER 201 3SIS A P0C6Y8 UNP 201 140 2 expression tag GLY 62 3SIS B P0C6Y8 UNP 1 2 expression tag SER 63 3SIS B P0C6Y8 UNP 2 2 ARG engineered mutation GLN 70 3SIS B P0C6Y8 UNP 70 9 2 VAL engineered mutation ILE 82 3SIS B P0C6Y8 UNP 82 21 2 SER engineered mutation ASN 151 3SIS B P0C6Y8 UNP 151 90 2 LEU engineered mutation SER 201 3SIS B P0C6Y8 UNP 201 140 11 6 2 8 10 2 anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel A ASP 66 A ASP 5 A TYR 69 A TYR 8 A PHE 205 A PHE 144 A PRO 209 A PRO 148 A TYR 80 A TYR 19 A LEU 84 A LEU 23 A TYR 165 A TYR 104 A PHE 170 A PHE 109 A ARG 173 A ARG 112 A THR 180 A THR 119 A THR 153 A THR 92 A SER 160 A SER 99 A TRP 138 A TRP 77 A LYS 145 A LYS 84 A TRP 102 A TRP 41 A ILE 108 A ILE 47 A GLY 90 A GLY 29 A THR 96 A THR 35 A ASN 198 A ASN 137 A SER 201 A SER 140 A THR 72 A THR 11 A PHE 74 A PHE 13 A ASP 66 A ASP 5 A TYR 69 A TYR 8 A PHE 205 A PHE 144 A PRO 209 A PRO 148 A TYR 80 A TYR 19 A LEU 84 A LEU 23 A TYR 165 A TYR 104 A PHE 170 A PHE 109 A ARG 173 A ARG 112 A THR 180 A THR 119 A THR 185 A THR 124 A SER 190 A SER 129 A VAL 112 A VAL 51 A LEU 121 A LEU 60 A GLN 124 A GLN 63 A ASN 132 A ASN 71 B THR 72 B THR 11 B PHE 74 B PHE 13 B ASN 198 B ASN 137 B SER 201 B SER 140 B GLY 90 B GLY 29 B THR 96 B THR 35 B TRP 102 B TRP 41 B ILE 108 B ILE 47 B TRP 138 B TRP 77 B LYS 145 B LYS 84 B THR 153 B THR 92 B SER 160 B SER 99 B ARG 173 B ARG 112 B THR 180 B THR 119 B THR 185 B THR 124 B SER 190 B SER 129 B THR 72 B THR 11 B PHE 74 B PHE 13 B ASN 198 B ASN 137 B SER 201 B SER 140 B GLY 90 B GLY 29 B THR 96 B THR 35 B TRP 102 B TRP 41 B ILE 108 B ILE 47 B TRP 138 B TRP 77 B LYS 145 B LYS 84 B THR 153 B THR 92 B SER 160 B SER 99 B ARG 173 B ARG 112 B THR 180 B THR 119 B TYR 165 B TYR 104 B PHE 170 B PHE 109 B TYR 80 B TYR 19 B ALA 85 B ALA 24 B ASP 204 B ASP 143 B PRO 209 B PRO 148 B VAL 112 B VAL 51 B LEU 121 B LEU 60 B GLN 124 B GLN 63 B ASN 132 B ASN 71 19 P 21 21 21