0.007331
0.000000
0.002337
0.000000
0.009625
0.000000
0.000000
0.000000
0.022076
0.00000
0.00000
0.00000
van den Berg, B.
Eren, E.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
107.68
90.00
136.408
103.892
47.544
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C16 H34 O5
306.438
(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
C
N
75
N
C
N
76
N
C
N
77
N
C
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
C
N
82
N
O
N
83
N
C
N
84
N
C
N
85
N
O
N
86
N
C
N
87
N
C
N
88
N
O
N
89
N
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
O
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
N
N
130
S
C
N
131
N
C
N
132
N
O
N
133
N
C
N
134
N
C
N
135
N
C
N
136
N
O
N
137
N
N
N
138
N
O
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
N
N
150
S
C
N
151
N
C
N
152
N
O
N
153
N
C
N
154
N
C
N
155
N
C
N
156
N
O
N
157
N
O
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
N
N
169
N
C
N
170
N
C
N
171
N
O
N
172
N
O
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
N
N
179
S
C
N
180
N
C
N
181
N
O
N
182
N
C
Y
183
N
C
Y
184
N
N
Y
185
N
C
Y
186
N
C
Y
187
N
N
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
O
N
200
N
H
N
201
N
H
N
202
N
N
N
203
S
C
N
204
N
C
N
205
N
O
N
206
S
C
N
207
N
C
N
208
N
C
N
209
N
C
N
210
N
O
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
N
N
225
S
C
N
226
N
C
N
227
N
O
N
228
N
C
N
229
N
C
N
230
N
C
N
231
N
C
N
232
N
O
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
N
N
247
S
C
N
248
N
C
N
249
N
O
N
250
N
C
N
251
N
C
N
252
N
C
N
253
N
C
N
254
N
N
N
255
N
O
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
N
N
272
S
C
N
273
N
C
N
274
N
O
N
275
N
C
N
276
N
C
N
277
N
S
N
278
N
C
N
279
N
O
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
N
N
292
S
C
N
293
N
C
N
294
N
O
N
295
N
C
Y
296
N
C
Y
297
N
C
Y
298
N
C
Y
299
N
C
Y
300
N
C
Y
301
N
C
N
302
N
O
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
N
N
315
S
C
N
316
N
C
N
317
N
O
N
318
N
C
N
319
N
C
N
320
N
C
N
321
N
O
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
N
N
332
S
C
N
333
N
C
N
334
N
O
N
335
N
C
N
336
N
O
N
337
N
O
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
R
C
N
350
N
O
N
351
N
C
N
352
N
O
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
N
N
363
S
C
N
364
N
C
N
365
N
O
N
366
N
C
Y
367
N
C
Y
368
N
C
Y
369
N
C
Y
370
N
N
Y
371
N
C
Y
372
N
C
Y
373
N
C
Y
374
N
C
Y
375
N
C
N
376
N
O
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
N
N
390
S
C
N
391
N
C
N
392
N
O
N
393
N
C
Y
394
N
C
Y
395
N
C
Y
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
C
N
400
N
O
N
401
N
O
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
N
N
414
S
C
N
415
N
C
N
416
N
O
N
417
N
C
N
418
N
C
N
419
N
C
N
420
N
O
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
doub
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
doub
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
doub
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
Y
181
N
sing
Y
182
N
doub
Y
183
N
doub
N
184
N
sing
Y
185
N
sing
N
186
N
sing
Y
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
doub
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
doub
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
doub
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
doub
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
Y
289
N
doub
Y
290
N
sing
Y
291
N
sing
N
292
N
sing
Y
293
N
doub
N
294
N
sing
Y
295
N
doub
N
296
N
sing
Y
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
doub
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
doub
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
doub
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
doub
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
Y
358
N
doub
Y
359
N
sing
Y
360
N
sing
N
361
N
sing
Y
362
N
doub
Y
363
N
sing
Y
364
N
sing
N
365
N
sing
Y
366
N
sing
Y
367
N
doub
N
368
N
sing
Y
369
N
doub
N
370
N
sing
Y
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
doub
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
Y
386
N
doub
Y
387
N
sing
Y
388
N
sing
N
389
N
sing
Y
390
N
doub
N
391
N
sing
Y
392
N
doub
N
393
N
sing
Y
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
doub
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
US
Plos Biol.
1544-9173
10
e1001242
e1001242
10.1371/journal.pbio.1001242
22272184
Substrate Specificity within a Family of Outer Membrane Carboxylate Channels.
2012
10.2210/pdb3sy7/pdb
pdb_00003sy7
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2010-12-02
ADSC QUANTUM 315
Si(111)
SINGLE WAVELENGTH
M
x-ray
1
1.10
1.0
X25
NSLS
1.10
SYNCHROTRON
NSLS BEAMLINE X25
46950.195
Porin D
3.4.21.-
unp residues 24-443
V140F
1
man
polymer
306.438
(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
8
syn
non-polymer
18.015
water
130
nat
water
Imipenem/basic amino acid-specific outer membrane pore, Outer membrane protein D2
no
no
DAFVSDQAEAKGFIEDSSLDLLLRNYYFNRDGKSGSGDRVDWTQGFLTTYESGFTQGTVGFGVDAFGYLGLKLDGTSDKT
GTGNLPVMNDGKPRDDYSRAGGAVKVRISKTMLKWGEMQPTAPVFAAGGSRLFPQTATGVQLQSSEFEGLDLEAGHFTEG
KEPTTVKSRGELYATYAGETAKSADFIGGRYAITDNLSASLYGAELEDIYRQYYLNSNYTIPLASDQSLGFDFNIYRTND
EGKAKAGDISNTTWSLAAAYTLDAHTFTLAYQKVHGDQPFDYIGFGRNGSGAGGDSIFLANSVQYSDFNGPGEKSWQARY
DLNLASYGVPGLTFMVRYINGKDIDGTKMSDNNVGYKNYGYGEDGKHHETNLEAKYVVQSGPAKDLSFRIRQAWHRANAD
QGEGDQNEFRLIVDYPLSILGGHHHHHH
DAFVSDQAEAKGFIEDSSLDLLLRNYYFNRDGKSGSGDRVDWTQGFLTTYESGFTQGTVGFGVDAFGYLGLKLDGTSDKT
GTGNLPVMNDGKPRDDYSRAGGAVKVRISKTMLKWGEMQPTAPVFAAGGSRLFPQTATGVQLQSSEFEGLDLEAGHFTEG
KEPTTVKSRGELYATYAGETAKSADFIGGRYAITDNLSASLYGAELEDIYRQYYLNSNYTIPLASDQSLGFDFNIYRTND
EGKAKAGDISNTTWSLAAAYTLDAHTFTLAYQKVHGDQPFDYIGFGRNGSGAGGDSIFLANSVQYSDFNGPGEKSWQARY
DLNLASYGVPGLTFMVRYINGKDIDGTKMSDNNVGYKNYGYGEDGKHHETNLEAKYVVQSGPAKDLSFRIRQAWHRANAD
QGEGDQNEFRLIVDYPLSILGGHHHHHH
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
oprD, PA0958
287
Pseudomonas aeruginosa
562
Escherichia coli
1
3.42
64.02
VAPOR DIFFUSION
5.5
2 M ammonium sulphate
50 mM Na-citrate, pH 5.5, VAPOR DIFFUSION, temperature 295K
295
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
struct_site
repository
Initial release
Data collection
Database references
Derived calculations
1
0
2012-02-08
1
1
2024-02-28
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2011-07-15
REL
REL
C8E
(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
HOH
water
AUTHORS HAVE STATED THAT THE RESIDUE 140 IS INDEED A VAL AND NOT A PHE
C8E
1
2
C8E
C8E
429
A
C8E
2
2
C8E
C8E
430
A
C8E
3
2
C8E
C8E
431
A
C8E
4
2
C8E
C8E
432
A
C8E
5
2
C8E
C8E
433
A
C8E
6
2
C8E
C8E
434
A
C8E
7
2
C8E
C8E
435
A
C8E
8
2
C8E
C8E
436
A
HOH
1
3
HOH
HOH
437
A
HOH
2
3
HOH
HOH
438
A
HOH
3
3
HOH
HOH
439
A
HOH
4
3
HOH
HOH
440
A
HOH
5
3
HOH
HOH
441
A
HOH
6
3
HOH
HOH
442
A
HOH
7
3
HOH
HOH
443
A
HOH
8
3
HOH
HOH
444
A
HOH
9
3
HOH
HOH
445
A
HOH
10
3
HOH
HOH
446
A
HOH
11
3
HOH
HOH
447
A
HOH
12
3
HOH
HOH
448
A
HOH
13
3
HOH
HOH
449
A
HOH
14
3
HOH
HOH
450
A
HOH
15
3
HOH
HOH
451
A
HOH
16
3
HOH
HOH
452
A
HOH
17
3
HOH
HOH
453
A
HOH
18
3
HOH
HOH
454
A
HOH
19
3
HOH
HOH
455
A
HOH
20
3
HOH
HOH
456
A
HOH
21
3
HOH
HOH
457
A
HOH
22
3
HOH
HOH
458
A
HOH
23
3
HOH
HOH
459
A
HOH
24
3
HOH
HOH
460
A
HOH
25
3
HOH
HOH
461
A
HOH
26
3
HOH
HOH
462
A
HOH
27
3
HOH
HOH
463
A
HOH
28
3
HOH
HOH
464
A
HOH
29
3
HOH
HOH
465
A
HOH
30
3
HOH
HOH
466
A
HOH
31
3
HOH
HOH
467
A
HOH
32
3
HOH
HOH
468
A
HOH
33
3
HOH
HOH
469
A
HOH
34
3
HOH
HOH
470
A
HOH
35
3
HOH
HOH
471
A
HOH
36
3
HOH
HOH
472
A
HOH
37
3
HOH
HOH
473
A
HOH
38
3
HOH
HOH
474
A
HOH
39
3
HOH
HOH
475
A
HOH
40
3
HOH
HOH
476
A
HOH
41
3
HOH
HOH
477
A
HOH
42
3
HOH
HOH
478
A
HOH
43
3
HOH
HOH
479
A
HOH
44
3
HOH
HOH
480
A
HOH
45
3
HOH
HOH
481
A
HOH
46
3
HOH
HOH
482
A
HOH
47
3
HOH
HOH
483
A
HOH
48
3
HOH
HOH
484
A
HOH
49
3
HOH
HOH
485
A
HOH
51
3
HOH
HOH
486
A
HOH
52
3
HOH
HOH
487
A
HOH
53
3
HOH
HOH
488
A
HOH
54
3
HOH
HOH
489
A
HOH
55
3
HOH
HOH
490
A
HOH
56
3
HOH
HOH
491
A
HOH
57
3
HOH
HOH
492
A
HOH
58
3
HOH
HOH
493
A
HOH
59
3
HOH
HOH
494
A
HOH
60
3
HOH
HOH
495
A
HOH
61
3
HOH
HOH
496
A
HOH
62
3
HOH
HOH
497
A
HOH
63
3
HOH
HOH
498
A
HOH
64
3
HOH
HOH
499
A
HOH
65
3
HOH
HOH
500
A
HOH
66
3
HOH
HOH
501
A
HOH
67
3
HOH
HOH
502
A
HOH
68
3
HOH
HOH
503
A
HOH
69
3
HOH
HOH
504
A
HOH
70
3
HOH
HOH
505
A
HOH
71
3
HOH
HOH
506
A
HOH
72
3
HOH
HOH
507
A
HOH
73
3
HOH
HOH
508
A
HOH
74
3
HOH
HOH
509
A
HOH
75
3
HOH
HOH
510
A
HOH
76
3
HOH
HOH
511
A
HOH
77
3
HOH
HOH
512
A
HOH
78
3
HOH
HOH
513
A
HOH
79
3
HOH
HOH
514
A
HOH
80
3
HOH
HOH
515
A
HOH
81
3
HOH
HOH
516
A
HOH
82
3
HOH
HOH
517
A
HOH
83
3
HOH
HOH
518
A
HOH
84
3
HOH
HOH
519
A
HOH
85
3
HOH
HOH
520
A
HOH
86
3
HOH
HOH
521
A
HOH
87
3
HOH
HOH
522
A
HOH
88
3
HOH
HOH
523
A
HOH
89
3
HOH
HOH
524
A
HOH
90
3
HOH
HOH
525
A
HOH
91
3
HOH
HOH
526
A
HOH
92
3
HOH
HOH
527
A
HOH
93
3
HOH
HOH
528
A
HOH
94
3
HOH
HOH
529
A
HOH
95
3
HOH
HOH
530
A
HOH
96
3
HOH
HOH
531
A
HOH
97
3
HOH
HOH
532
A
HOH
98
3
HOH
HOH
533
A
HOH
99
3
HOH
HOH
534
A
HOH
100
3
HOH
HOH
535
A
HOH
101
3
HOH
HOH
536
A
HOH
102
3
HOH
HOH
537
A
HOH
103
3
HOH
HOH
538
A
HOH
104
3
HOH
HOH
539
A
HOH
105
3
HOH
HOH
540
A
HOH
106
3
HOH
HOH
541
A
HOH
107
3
HOH
HOH
542
A
HOH
108
3
HOH
HOH
543
A
HOH
109
3
HOH
HOH
544
A
HOH
110
3
HOH
HOH
545
A
HOH
111
3
HOH
HOH
546
A
HOH
112
3
HOH
HOH
547
A
HOH
113
3
HOH
HOH
548
A
HOH
114
3
HOH
HOH
549
A
HOH
115
3
HOH
HOH
550
A
HOH
116
3
HOH
HOH
551
A
HOH
117
3
HOH
HOH
552
A
HOH
118
3
HOH
HOH
553
A
HOH
119
3
HOH
HOH
554
A
HOH
120
3
HOH
HOH
555
A
HOH
121
3
HOH
HOH
556
A
HOH
122
3
HOH
HOH
557
A
HOH
123
3
HOH
HOH
558
A
HOH
124
3
HOH
HOH
559
A
HOH
125
3
HOH
HOH
560
A
HOH
126
3
HOH
HOH
561
A
HOH
127
3
HOH
HOH
562
A
HOH
128
3
HOH
HOH
563
A
HOH
129
3
HOH
HOH
564
A
HOH
130
3
HOH
HOH
565
A
HOH
131
3
HOH
HOH
566
A
ASP
1
n
1
ASP
1
A
ALA
2
n
2
ALA
2
A
PHE
3
n
3
PHE
3
A
VAL
4
n
4
VAL
4
A
SER
5
n
5
SER
5
A
ASP
6
n
6
ASP
6
A
GLN
7
n
7
GLN
7
A
ALA
8
n
8
ALA
8
A
GLU
9
n
9
GLU
9
A
ALA
10
n
10
ALA
10
A
LYS
11
n
11
LYS
11
A
GLY
12
n
12
GLY
12
A
PHE
13
n
13
PHE
13
A
ILE
14
n
14
ILE
14
A
GLU
15
n
15
GLU
15
A
ASP
16
n
16
ASP
16
A
SER
17
n
17
SER
17
A
SER
18
n
18
SER
18
A
LEU
19
n
19
LEU
19
A
ASP
20
n
20
ASP
20
A
LEU
21
n
21
LEU
21
A
LEU
22
n
22
LEU
22
A
LEU
23
n
23
LEU
23
A
ARG
24
n
24
ARG
24
A
ASN
25
n
25
ASN
25
A
TYR
26
n
26
TYR
26
A
TYR
27
n
27
TYR
27
A
PHE
28
n
28
PHE
28
A
ASN
29
n
29
ASN
29
A
ARG
30
n
30
ARG
30
A
ASP
31
n
31
ASP
31
A
n
32
32
A
n
33
33
A
n
34
34
A
n
35
35
A
n
36
36
A
n
37
37
A
ASP
38
n
38
ASP
38
A
ARG
39
n
39
ARG
39
A
VAL
40
n
40
VAL
40
A
ASP
41
n
41
ASP
41
A
TRP
42
n
42
TRP
42
A
THR
43
n
43
THR
43
A
GLN
44
n
44
GLN
44
A
GLY
45
n
45
GLY
45
A
PHE
46
n
46
PHE
46
A
LEU
47
n
47
LEU
47
A
THR
48
n
48
THR
48
A
THR
49
n
49
THR
49
A
TYR
50
n
50
TYR
50
A
GLU
51
n
51
GLU
51
A
SER
52
n
52
SER
52
A
GLY
53
n
53
GLY
53
A
PHE
54
n
54
PHE
54
A
THR
55
n
55
THR
55
A
GLN
56
n
56
GLN
56
A
GLY
57
n
57
GLY
57
A
THR
58
n
58
THR
58
A
VAL
59
n
59
VAL
59
A
GLY
60
n
60
GLY
60
A
PHE
61
n
61
PHE
61
A
GLY
62
n
62
GLY
62
A
VAL
63
n
63
VAL
63
A
ASP
64
n
64
ASP
64
A
ALA
65
n
65
ALA
65
A
PHE
66
n
66
PHE
66
A
GLY
67
n
67
GLY
67
A
TYR
68
n
68
TYR
68
A
LEU
69
n
69
LEU
69
A
GLY
70
n
70
GLY
70
A
LEU
71
n
71
LEU
71
A
LYS
72
n
72
LYS
72
A
LEU
73
n
73
LEU
73
A
ASP
74
n
74
ASP
74
A
GLY
75
n
75
GLY
75
A
THR
76
n
76
THR
76
A
n
77
77
A
n
78
78
A
n
79
79
A
n
80
80
A
n
81
81
A
n
82
82
A
n
83
83
A
n
84
84
A
n
85
85
A
n
86
86
A
n
87
87
A
n
88
88
A
n
89
89
A
n
90
90
A
n
91
91
A
n
92
92
A
n
93
93
A
n
94
94
A
ASP
95
n
95
ASP
95
A
ASP
96
n
96
ASP
96
A
TYR
97
n
97
TYR
97
A
SER
98
n
98
SER
98
A
ARG
99
n
99
ARG
99
A
ALA
100
n
100
ALA
100
A
GLY
101
n
101
GLY
101
A
GLY
102
n
102
GLY
102
A
ALA
103
n
103
ALA
103
A
VAL
104
n
104
VAL
104
A
LYS
105
n
105
LYS
105
A
VAL
106
n
106
VAL
106
A
ARG
107
n
107
ARG
107
A
ILE
108
n
108
ILE
108
A
SER
109
n
109
SER
109
A
LYS
110
n
110
LYS
110
A
THR
111
n
111
THR
111
A
MET
112
n
112
MET
112
A
LEU
113
n
113
LEU
113
A
LYS
114
n
114
LYS
114
A
TRP
115
n
115
TRP
115
A
GLY
116
n
116
GLY
116
A
GLU
117
n
117
GLU
117
A
MET
118
n
118
MET
118
A
GLN
119
n
119
GLN
119
A
PRO
120
n
120
PRO
120
A
THR
121
n
121
THR
121
A
ALA
122
n
122
ALA
122
A
PRO
123
n
123
PRO
123
A
VAL
124
n
124
VAL
124
A
PHE
125
n
125
PHE
125
A
ALA
126
n
126
ALA
126
A
ALA
127
n
127
ALA
127
A
GLY
128
n
128
GLY
128
A
GLY
129
n
129
GLY
129
A
SER
130
n
130
SER
130
A
ARG
131
n
131
ARG
131
A
LEU
132
n
132
LEU
132
A
PHE
133
n
133
PHE
133
A
PRO
134
n
134
PRO
134
A
GLN
135
n
135
GLN
135
A
THR
136
n
136
THR
136
A
ALA
137
n
137
ALA
137
A
THR
138
n
138
THR
138
A
GLY
139
n
139
GLY
139
A
VAL
140
n
140
VAL
140
A
GLN
141
n
141
GLN
141
A
LEU
142
n
142
LEU
142
A
GLN
143
n
143
GLN
143
A
SER
144
n
144
SER
144
A
SER
145
n
145
SER
145
A
GLU
146
n
146
GLU
146
A
PHE
147
n
147
PHE
147
A
GLU
148
n
148
GLU
148
A
GLY
149
n
149
GLY
149
A
LEU
150
n
150
LEU
150
A
ASP
151
n
151
ASP
151
A
LEU
152
n
152
LEU
152
A
GLU
153
n
153
GLU
153
A
ALA
154
n
154
ALA
154
A
GLY
155
n
155
GLY
155
A
HIS
156
n
156
HIS
156
A
PHE
157
n
157
PHE
157
A
THR
158
n
158
THR
158
A
GLU
159
n
159
GLU
159
A
n
160
160
A
n
161
161
A
n
162
162
A
n
163
163
A
n
164
164
A
n
165
165
A
n
166
166
A
n
167
167
A
n
168
168
A
n
169
169
A
n
170
170
A
GLU
171
n
171
GLU
171
A
LEU
172
n
172
LEU
172
A
TYR
173
n
173
TYR
173
A
ALA
174
n
174
ALA
174
A
THR
175
n
175
THR
175
A
TYR
176
n
176
TYR
176
A
ALA
177
n
177
ALA
177
A
GLY
178
n
178
GLY
178
A
GLU
179
n
179
GLU
179
A
THR
180
n
180
THR
180
A
ALA
181
n
181
ALA
181
A
LYS
182
n
182
LYS
182
A
SER
183
n
183
SER
183
A
ALA
184
n
184
ALA
184
A
ASP
185
n
185
ASP
185
A
PHE
186
n
186
PHE
186
A
ILE
187
n
187
ILE
187
A
GLY
188
n
188
GLY
188
A
GLY
189
n
189
GLY
189
A
ARG
190
n
190
ARG
190
A
TYR
191
n
191
TYR
191
A
ALA
192
n
192
ALA
192
A
ILE
193
n
193
ILE
193
A
THR
194
n
194
THR
194
A
ASP
195
n
195
ASP
195
A
ASN
196
n
196
ASN
196
A
LEU
197
n
197
LEU
197
A
SER
198
n
198
SER
198
A
ALA
199
n
199
ALA
199
A
SER
200
n
200
SER
200
A
LEU
201
n
201
LEU
201
A
TYR
202
n
202
TYR
202
A
GLY
203
n
203
GLY
203
A
ALA
204
n
204
ALA
204
A
GLU
205
n
205
GLU
205
A
LEU
206
n
206
LEU
206
A
GLU
207
n
207
GLU
207
A
ASP
208
n
208
ASP
208
A
ILE
209
n
209
ILE
209
A
TYR
210
n
210
TYR
210
A
ARG
211
n
211
ARG
211
A
GLN
212
n
212
GLN
212
A
TYR
213
n
213
TYR
213
A
TYR
214
n
214
TYR
214
A
LEU
215
n
215
LEU
215
A
ASN
216
n
216
ASN
216
A
SER
217
n
217
SER
217
A
ASN
218
n
218
ASN
218
A
TYR
219
n
219
TYR
219
A
THR
220
n
220
THR
220
A
ILE
221
n
221
ILE
221
A
PRO
222
n
222
PRO
222
A
LEU
223
n
223
LEU
223
A
ALA
224
n
224
ALA
224
A
SER
225
n
225
SER
225
A
ASP
226
n
226
ASP
226
A
GLN
227
n
227
GLN
227
A
SER
228
n
228
SER
228
A
LEU
229
n
229
LEU
229
A
GLY
230
n
230
GLY
230
A
PHE
231
n
231
PHE
231
A
ASP
232
n
232
ASP
232
A
PHE
233
n
233
PHE
233
A
ASN
234
n
234
ASN
234
A
ILE
235
n
235
ILE
235
A
TYR
236
n
236
TYR
236
A
ARG
237
n
237
ARG
237
A
THR
238
n
238
THR
238
A
ASN
239
n
239
ASN
239
A
ASP
240
n
240
ASP
240
A
GLU
241
n
241
GLU
241
A
GLY
242
n
242
GLY
242
A
LYS
243
n
243
LYS
243
A
ALA
244
n
244
ALA
244
A
LYS
245
n
245
LYS
245
A
ALA
246
n
246
ALA
246
A
GLY
247
n
247
GLY
247
A
ASP
248
n
248
ASP
248
A
ILE
249
n
249
ILE
249
A
SER
250
n
250
SER
250
A
ASN
251
n
251
ASN
251
A
THR
252
n
252
THR
252
A
THR
253
n
253
THR
253
A
TRP
254
n
254
TRP
254
A
SER
255
n
255
SER
255
A
LEU
256
n
256
LEU
256
A
ALA
257
n
257
ALA
257
A
ALA
258
n
258
ALA
258
A
ALA
259
n
259
ALA
259
A
TYR
260
n
260
TYR
260
A
THR
261
n
261
THR
261
A
LEU
262
n
262
LEU
262
A
ASP
263
n
263
ASP
263
A
ALA
264
n
264
ALA
264
A
HIS
265
n
265
HIS
265
A
THR
266
n
266
THR
266
A
PHE
267
n
267
PHE
267
A
THR
268
n
268
THR
268
A
LEU
269
n
269
LEU
269
A
ALA
270
n
270
ALA
270
A
TYR
271
n
271
TYR
271
A
GLN
272
n
272
GLN
272
A
LYS
273
n
273
LYS
273
A
VAL
274
n
274
VAL
274
A
HIS
275
n
275
HIS
275
A
GLY
276
n
276
GLY
276
A
ASP
277
n
277
ASP
277
A
GLN
278
n
278
GLN
278
A
PRO
279
n
279
PRO
279
A
PHE
280
n
280
PHE
280
A
ASP
281
n
281
ASP
281
A
TYR
282
n
282
TYR
282
A
ILE
283
n
283
ILE
283
A
GLY
284
n
284
GLY
284
A
PHE
285
n
285
PHE
285
A
GLY
286
n
286
GLY
286
A
n
287
287
A
n
288
288
A
n
289
289
A
n
290
290
A
GLY
291
n
291
GLY
291
A
ALA
292
n
292
ALA
292
A
GLY
293
n
293
GLY
293
A
GLY
294
n
294
GLY
294
A
ASP
295
n
295
ASP
295
A
SER
296
n
296
SER
296
A
ILE
297
n
297
ILE
297
A
PHE
298
n
298
PHE
298
A
LEU
299
n
299
LEU
299
A
ALA
300
n
300
ALA
300
A
ASN
301
n
301
ASN
301
A
SER
302
n
302
SER
302
A
VAL
303
n
303
VAL
303
A
GLN
304
n
304
GLN
304
A
TYR
305
n
305
TYR
305
A
SER
306
n
306
SER
306
A
ASP
307
n
307
ASP
307
A
PHE
308
n
308
PHE
308
A
ASN
309
n
309
ASN
309
A
GLY
310
n
310
GLY
310
A
PRO
311
n
311
PRO
311
A
GLY
312
n
312
GLY
312
A
GLU
313
n
313
GLU
313
A
LYS
314
n
314
LYS
314
A
SER
315
n
315
SER
315
A
TRP
316
n
316
TRP
316
A
GLN
317
n
317
GLN
317
A
ALA
318
n
318
ALA
318
A
ARG
319
n
319
ARG
319
A
TYR
320
n
320
TYR
320
A
ASP
321
n
321
ASP
321
A
LEU
322
n
322
LEU
322
A
ASN
323
n
323
ASN
323
A
LEU
324
n
324
LEU
324
A
ALA
325
n
325
ALA
325
A
SER
326
n
326
SER
326
A
TYR
327
n
327
TYR
327
A
GLY
328
n
328
GLY
328
A
VAL
329
n
329
VAL
329
A
PRO
330
n
330
PRO
330
A
GLY
331
n
331
GLY
331
A
LEU
332
n
332
LEU
332
A
THR
333
n
333
THR
333
A
PHE
334
n
334
PHE
334
A
MET
335
n
335
MET
335
A
VAL
336
n
336
VAL
336
A
ARG
337
n
337
ARG
337
A
TYR
338
n
338
TYR
338
A
ILE
339
n
339
ILE
339
A
ASN
340
n
340
ASN
340
A
GLY
341
n
341
GLY
341
A
LYS
342
n
342
LYS
342
A
ASP
343
n
343
ASP
343
A
ILE
344
n
344
ILE
344
A
ASP
345
n
345
ASP
345
A
GLY
346
n
346
GLY
346
A
THR
347
n
347
THR
347
A
LYS
348
n
348
LYS
348
A
MET
349
n
349
MET
349
A
SER
350
n
350
SER
350
A
ASP
351
n
351
ASP
351
A
ASN
352
n
352
ASN
352
A
ASN
353
n
353
ASN
353
A
VAL
354
n
354
VAL
354
A
GLY
355
n
355
GLY
355
A
TYR
356
n
356
TYR
356
A
LYS
357
n
357
LYS
357
A
ASN
358
n
358
ASN
358
A
TYR
359
n
359
TYR
359
A
GLY
360
n
360
GLY
360
A
TYR
361
n
361
TYR
361
A
GLY
362
n
362
GLY
362
A
GLU
363
n
363
GLU
363
A
ASP
364
n
364
ASP
364
A
GLY
365
n
365
GLY
365
A
LYS
366
n
366
LYS
366
A
HIS
367
n
367
HIS
367
A
HIS
368
n
368
HIS
368
A
GLU
369
n
369
GLU
369
A
THR
370
n
370
THR
370
A
ASN
371
n
371
ASN
371
A
LEU
372
n
372
LEU
372
A
GLU
373
n
373
GLU
373
A
ALA
374
n
374
ALA
374
A
LYS
375
n
375
LYS
375
A
TYR
376
n
376
TYR
376
A
VAL
377
n
377
VAL
377
A
VAL
378
n
378
VAL
378
A
GLN
379
n
379
GLN
379
A
SER
380
n
380
SER
380
A
GLY
381
n
381
GLY
381
A
PRO
382
n
382
PRO
382
A
ALA
383
n
383
ALA
383
A
LYS
384
n
384
LYS
384
A
ASP
385
n
385
ASP
385
A
LEU
386
n
386
LEU
386
A
SER
387
n
387
SER
387
A
PHE
388
n
388
PHE
388
A
ARG
389
n
389
ARG
389
A
ILE
390
n
390
ILE
390
A
ARG
391
n
391
ARG
391
A
GLN
392
n
392
GLN
392
A
ALA
393
n
393
ALA
393
A
TRP
394
n
394
TRP
394
A
HIS
395
n
395
HIS
395
A
ARG
396
n
396
ARG
396
A
ALA
397
n
397
ALA
397
A
ASN
398
n
398
ASN
398
A
ALA
399
n
399
ALA
399
A
ASP
400
n
400
ASP
400
A
GLN
401
n
401
GLN
401
A
GLY
402
n
402
GLY
402
A
GLU
403
n
403
GLU
403
A
GLY
404
n
404
GLY
404
A
ASP
405
n
405
ASP
405
A
GLN
406
n
406
GLN
406
A
ASN
407
n
407
ASN
407
A
GLU
408
n
408
GLU
408
A
PHE
409
n
409
PHE
409
A
ARG
410
n
410
ARG
410
A
LEU
411
n
411
LEU
411
A
ILE
412
n
412
ILE
412
A
VAL
413
n
413
VAL
413
A
ASP
414
n
414
ASP
414
A
TYR
415
n
415
TYR
415
A
PRO
416
n
416
PRO
416
A
LEU
417
n
417
LEU
417
A
SER
418
n
418
SER
418
A
ILE
419
n
419
ILE
419
A
LEU
420
n
420
LEU
420
A
GLY
421
n
421
GLY
421
A
n
422
422
A
n
423
423
A
n
424
424
A
n
425
425
A
n
426
426
A
n
427
427
A
n
428
428
A
3.2919
-0.8262
-0.2985
0.2353
0.2426
0.8148
-0.0952
0.2997
0.1685
-0.0245
0.0082
-0.0788
0.0492
0.0086
0.1509
0.2003
-0.0263
-0.0094
0.2433
0.0330
0.2487
refined
21.1303
-8.4227
-0.0965
X-RAY DIFFRACTION
2.0478
-0.7588
-0.0128
1.5299
-0.0608
2.7473
-0.1534
0.1714
0.1897
0.0530
0.0645
-0.1817
-0.0453
0.1025
0.1336
0.2022
-0.0227
-0.0020
0.2764
0.0052
0.2318
refined
16.0535
-10.4562
11.7003
X-RAY DIFFRACTION
1.7701
0.0802
0.2576
1.7323
-0.0272
1.1167
-0.0384
-0.0122
-0.0256
0.1687
0.0531
0.0350
0.0758
-0.0194
0.0012
0.1931
0.0357
0.0264
0.1799
-0.0070
0.1162
refined
24.1743
-14.9053
23.0830
X-RAY DIFFRACTION
1.4931
0.4548
-0.0312
0.7892
0.1213
1.8579
-0.0795
-0.0564
-0.0251
-0.0262
0.0025
-0.0761
0.0772
0.2232
0.1138
0.1859
0.0443
-0.0118
0.1894
-0.0234
0.2003
refined
38.2418
-16.5240
15.7736
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
chain 'A' and (resseq 1:121)
X-RAY DIFFRACTION
2
chain 'A' and (resseq 122:158)
X-RAY DIFFRACTION
3
chain 'A' and (resseq 159:304)
X-RAY DIFFRACTION
4
chain 'A' and (resseq 305:421)
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
GLY
284
A
O
GLY
284
A
N
TYR
173
A
N
TYR
173
A
N
ASP
151
A
N
ASP
151
A
O
ARG
190
A
O
ARG
190
A
N
TYR
191
A
N
TYR
191
A
O
ALA
199
A
O
ALA
199
A
N
ALA
204
A
N
ALA
204
A
O
GLN
212
A
O
GLN
212
A
N
SER
217
A
N
SER
217
A
O
PHE
233
A
O
PHE
233
A
N
THR
238
A
N
THR
238
A
O
ASN
251
A
O
ASN
251
A
N
LEU
262
A
N
LEU
262
A
O
HIS
265
A
O
HIS
265
A
N
THR
268
A
N
THR
268
A
O
ARG
319
A
O
ARG
319
A
N
LEU
322
A
N
LEU
322
A
O
PHE
334
A
O
PHE
334
A
N
MET
335
A
N
MET
335
A
O
GLU
373
A
O
GLU
373
A
N
HIS
368
A
N
HIS
368
A
O
ARG
396
A
O
ARG
396
A
N
HIS
395
A
N
HIS
395
A
O
GLN
406
A
O
GLN
406
A
O
PHE
409
A
O
PHE
409
A
N
ASN
29
A
N
ASN
29
A
N
TYR
26
A
N
TYR
26
A
O
THR
43
A
O
THR
43
A
N
TYR
50
A
N
TYR
50
A
O
ALA
65
A
O
ALA
65
A
N
TYR
68
A
N
TYR
68
A
O
ARG
99
A
O
ARG
99
A
N
GLY
102
A
N
GLY
102
A
O
GLU
117
A
O
GLU
117
A
N
MET
118
A
N
MET
118
A
O
ALA
137
A
O
ALA
137
A
N
LEU
142
A
N
LEU
142
A
O
ALA
154
A
O
ALA
154
1
A
CE
LYS
11
A
CE
LYS
11
1
Y
1
A
NZ
LYS
11
A
NZ
LYS
11
1
Y
1
A
CB
GLU
171
A
CB
GLU
171
1
Y
1
A
CG
GLU
171
A
CG
GLU
171
1
Y
1
A
CD
GLU
171
A
CD
GLU
171
1
Y
1
A
OE1
GLU
171
A
OE1
GLU
171
1
Y
1
A
OE2
GLU
171
A
OE2
GLU
171
1
Y
1
A
CE
LYS
182
A
CE
LYS
182
1
Y
1
A
NZ
LYS
182
A
NZ
LYS
182
1
Y
1
A
CE
LYS
243
A
CE
LYS
243
1
Y
1
A
NZ
LYS
243
A
NZ
LYS
243
1
Y
1
A
NZ
LYS
314
A
NZ
LYS
314
1
Y
1
A
NZ
LYS
348
A
NZ
LYS
348
1
Y
1
A
NZ
LYS
384
A
NZ
LYS
384
1
Y
1
A
C1
C8E
429
B
C1
C8E
1
1
N
1
A
C2
C8E
429
B
C2
C8E
1
1
N
1
A
C3
C8E
429
B
C3
C8E
1
1
N
1
A
C4
C8E
429
B
C4
C8E
1
1
N
1
A
C5
C8E
429
B
C5
C8E
1
1
N
1
A
C6
C8E
429
B
C6
C8E
1
1
N
1
A
C7
C8E
429
B
C7
C8E
1
1
N
1
A
C8
C8E
429
B
C8
C8E
1
1
N
1
A
O9
C8E
429
B
O9
C8E
1
1
N
1
A
C10
C8E
429
B
C10
C8E
1
1
N
1
A
C11
C8E
429
B
C11
C8E
1
1
N
1
A
C1
C8E
430
C
C1
C8E
1
1
N
1
A
C2
C8E
430
C
C2
C8E
1
1
N
1
A
C3
C8E
430
C
C3
C8E
1
1
N
1
A
C4
C8E
430
C
C4
C8E
1
1
N
1
A
C5
C8E
430
C
C5
C8E
1
1
N
1
A
C6
C8E
430
C
C6
C8E
1
1
N
1
A
C7
C8E
430
C
C7
C8E
1
1
N
1
A
C8
C8E
430
C
C8
C8E
1
1
N
1
A
O9
C8E
430
C
O9
C8E
1
1
N
1
A
C10
C8E
430
C
C10
C8E
1
1
N
1
A
C11
C8E
430
C
C11
C8E
1
1
N
1
A
C1
C8E
431
D
C1
C8E
1
1
N
1
A
C2
C8E
431
D
C2
C8E
1
1
N
1
A
C3
C8E
431
D
C3
C8E
1
1
N
1
A
C4
C8E
431
D
C4
C8E
1
1
N
1
A
C5
C8E
431
D
C5
C8E
1
1
N
1
A
C6
C8E
431
D
C6
C8E
1
1
N
1
A
C7
C8E
431
D
C7
C8E
1
1
N
1
A
C8
C8E
431
D
C8
C8E
1
1
N
1
A
O9
C8E
431
D
O9
C8E
1
1
N
1
A
C10
C8E
431
D
C10
C8E
1
1
N
1
A
C11
C8E
431
D
C11
C8E
1
1
N
1
A
O12
C8E
431
D
O12
C8E
1
1
N
1
A
C1
C8E
432
E
C1
C8E
1
1
N
1
A
C2
C8E
432
E
C2
C8E
1
1
N
1
A
C3
C8E
432
E
C3
C8E
1
1
N
1
A
C4
C8E
432
E
C4
C8E
1
1
N
1
A
C5
C8E
432
E
C5
C8E
1
1
N
1
A
C6
C8E
432
E
C6
C8E
1
1
N
1
A
C7
C8E
432
E
C7
C8E
1
1
N
1
A
C8
C8E
432
E
C8
C8E
1
1
N
1
A
O9
C8E
432
E
O9
C8E
1
1
N
1
A
C10
C8E
432
E
C10
C8E
1
1
N
1
A
C11
C8E
432
E
C11
C8E
1
1
N
1
A
C1
C8E
433
F
C1
C8E
1
1
N
1
A
C2
C8E
433
F
C2
C8E
1
1
N
1
A
C3
C8E
433
F
C3
C8E
1
1
N
1
A
C4
C8E
433
F
C4
C8E
1
1
N
1
A
C5
C8E
433
F
C5
C8E
1
1
N
1
A
C6
C8E
433
F
C6
C8E
1
1
N
1
A
C7
C8E
433
F
C7
C8E
1
1
N
1
A
C8
C8E
433
F
C8
C8E
1
1
N
1
A
O9
C8E
433
F
O9
C8E
1
1
N
1
A
C10
C8E
433
F
C10
C8E
1
1
N
1
A
C11
C8E
433
F
C11
C8E
1
1
N
1
A
O12
C8E
434
G
O12
C8E
1
1
N
1
A
C13
C8E
434
G
C13
C8E
1
1
N
1
A
C14
C8E
434
G
C14
C8E
1
1
N
1
A
O15
C8E
434
G
O15
C8E
1
1
N
1
A
C16
C8E
434
G
C16
C8E
1
1
N
1
A
C17
C8E
434
G
C17
C8E
1
1
N
1
A
O18
C8E
434
G
O18
C8E
1
1
N
1
A
C19
C8E
434
G
C19
C8E
1
1
N
1
A
C20
C8E
434
G
C20
C8E
1
1
N
1
A
O21
C8E
434
G
O21
C8E
1
1
N
1
A
O12
C8E
435
H
O12
C8E
1
1
N
1
A
C13
C8E
435
H
C13
C8E
1
1
N
1
A
C14
C8E
435
H
C14
C8E
1
1
N
1
A
O15
C8E
435
H
O15
C8E
1
1
N
1
A
C16
C8E
435
H
C16
C8E
1
1
N
1
A
C17
C8E
435
H
C17
C8E
1
1
N
1
A
O18
C8E
435
H
O18
C8E
1
1
N
1
A
C19
C8E
435
H
C19
C8E
1
1
N
1
A
C20
C8E
435
H
C20
C8E
1
1
N
1
A
O21
C8E
435
H
O21
C8E
1
1
N
1
A
C1
C8E
436
I
C1
C8E
1
1
N
1
A
C2
C8E
436
I
C2
C8E
1
1
N
1
A
C3
C8E
436
I
C3
C8E
1
1
N
1
A
C4
C8E
436
I
C4
C8E
1
1
N
1
A
C5
C8E
436
I
C5
C8E
1
1
N
1
A
C6
C8E
436
I
C6
C8E
1
1
N
1
A
C7
C8E
436
I
C7
C8E
1
1
N
1
A
C8
C8E
436
I
C8
C8E
1
1
N
1
A
O9
C8E
436
I
O9
C8E
1
1
N
1
A
C10
C8E
436
I
C10
C8E
1
1
N
1
A
C11
C8E
436
I
C11
C8E
1
1
N
1
A
O12
C8E
436
I
O12
C8E
1
1
N
1
A
C13
C8E
436
I
C13
C8E
1
1
N
1
A
C14
C8E
436
I
C14
C8E
1
1
N
1
A
GLY
32
A
GLY
32
1
Y
1
A
LYS
33
A
LYS
33
1
Y
1
A
SER
34
A
SER
34
1
Y
1
A
GLY
35
A
GLY
35
1
Y
1
A
SER
36
A
SER
36
1
Y
1
A
GLY
37
A
GLY
37
1
Y
1
A
SER
77
A
SER
77
1
Y
1
A
ASP
78
A
ASP
78
1
Y
1
A
LYS
79
A
LYS
79
1
Y
1
A
THR
80
A
THR
80
1
Y
1
A
GLY
81
A
GLY
81
1
Y
1
A
THR
82
A
THR
82
1
Y
1
A
GLY
83
A
GLY
83
1
Y
1
A
ASN
84
A
ASN
84
1
Y
1
A
LEU
85
A
LEU
85
1
Y
1
A
PRO
86
A
PRO
86
1
Y
1
A
VAL
87
A
VAL
87
1
Y
1
A
MET
88
A
MET
88
1
Y
1
A
ASN
89
A
ASN
89
1
Y
1
A
ASP
90
A
ASP
90
1
Y
1
A
GLY
91
A
GLY
91
1
Y
1
A
LYS
92
A
LYS
92
1
Y
1
A
PRO
93
A
PRO
93
1
Y
1
A
ARG
94
A
ARG
94
1
Y
1
A
GLY
160
A
GLY
160
1
Y
1
A
LYS
161
A
LYS
161
1
Y
1
A
GLU
162
A
GLU
162
1
Y
1
A
PRO
163
A
PRO
163
1
Y
1
A
THR
164
A
THR
164
1
Y
1
A
THR
165
A
THR
165
1
Y
1
A
VAL
166
A
VAL
166
1
Y
1
A
LYS
167
A
LYS
167
1
Y
1
A
SER
168
A
SER
168
1
Y
1
A
ARG
169
A
ARG
169
1
Y
1
A
GLY
170
A
GLY
170
1
Y
1
A
ARG
287
A
ARG
287
1
Y
1
A
ASN
288
A
ASN
288
1
Y
1
A
GLY
289
A
GLY
289
1
Y
1
A
SER
290
A
SER
290
1
Y
1
A
GLY
422
A
GLY
422
1
Y
1
A
HIS
423
A
HIS
423
1
Y
1
A
HIS
424
A
HIS
424
1
Y
1
A
HIS
425
A
HIS
425
1
Y
1
A
HIS
426
A
HIS
426
1
Y
1
A
HIS
427
A
HIS
427
1
Y
1
A
HIS
428
A
HIS
428
1
Y
1
A
A
OD1
NZ
ASP
LYS
41
72
2.13
1
A
A
OD2
NE
ASP
ARG
96
237
2.13
1_555
1_554
1
A
TYR
97
-174.18
124.14
1
A
SER
109
52.23
-119.70
1
A
ASP
208
59.51
17.93
1
A
ASP
263
62.27
-121.31
1
A
VAL
303
-120.32
-160.47
1
A
TYR
305
-96.28
-65.63
1
A
ASP
385
78.96
-12.06
1
A
SER
418
-151.00
57.54
4.3124
-0.0000
-0.9502
-10.1450
-0.0000
5.8326
0.2259
0.1956
0.1974
2.15
19.993
2001
34239
33514
5.97
97.55
0.68
random
1
1.34
MOLECULAR REPLACEMENT
21.87
0.49
0.80
ML
FLAT BULK SOLVENT MODEL
61.542
0.400
2.15
19.993
130
3177
78
0
2969
0.007
3107
1.072
4173
19.873
1111
0.079
424
0.004
546
0.3244
0.2469
2.2024
114
1768
77.00
0.2987
0.2469
2.2619
138
2092
91.00
0.3447
0.2493
2.3284
126
2260
98.00
0.2402
0.2114
2.4034
151
2280
100.00
0.2542
0.1966
2.4891
143
2325
100.00
0.2171
0.1835
2.5886
156
2286
100.00
0.2129
0.1683
2.7061
146
2310
100.00
0.2355
0.1829
2.8484
142
2300
100.00
0.2399
0.1817
3.0263
152
2302
100.00
0.2050
0.1746
3.2591
147
2308
100.00
0.2136
0.1831
3.5853
146
2315
100.00
0.2072
0.1871
4.1003
149
2305
100.00
0.1986
0.1764
5.1512
149
2321
100.00
0.2405
0.2417
19.9934
142
2341
99.00
2.15
50
3SY7
34239
33554
0.0
2.7
1
98.0
2.15
2.19
1
80.8
data collection
CBASS
phasing
PHASER
refinement
PHENIX
(phenix.refine: 1.7.1_743)
data reduction
HKL-2000
data scaling
HKL-2000
Improved crystal structure of Pseudomonas aeruginosa OprD
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
3
N
N
Probable.
A
ASP
6
A
ASP
6
HELX_P
A
ALA
10
A
ALA
10
5
1
5
A
ASN
353
A
ASN
353
HELX_P
A
TYR
359
A
TYR
359
1
2
7
A
ALA
399
A
ALA
399
HELX_P
A
GLY
402
A
GLY
402
5
3
4
MEMBRANE PROTEIN
beta-barrel, channel, outer membrane, membrane protein
PORD_PSEAE
UNP
1
24
P32722
DAFVSDQAEAKGFIEDSSLDLLLRNYYFNRDGKSGSGDRVDWTQGFLTTYESGFTQGTVGFGVDAFGYLGLKLDGTSDKT
GTGNLPVMNDGKPRDDYSRAGGAVKVRISKTMLKWGEMQPTAPVFAAGGSRLFPQTATGFQLQSSEFEGLDLEAGHFTEG
KEPTTVKSRGELYATYAGETAKSADFIGGRYAITDNLSASLYGAELEDIYRQYYLNSNYTIPLASDQSLGFDFNIYRTND
EGKAKAGDISNTTWSLAAAYTLDAHTFTLAYQKVHGDQPFDYIGFGRNGSGAGGDSIFLANSVQYSDFNGPGEKSWQARY
DLNLASYGVPGLTFMVRYINGKDIDGTKMSDNNVGYKNYGYGEDGKHHETNLEAKYVVQSGPAKDLSFRIRQAWHRANAD
QGEGDQNEFRLIVDYPLSIL
24
443
3SY7
1
420
P32722
A
1
1
420
1
PHE
SEE REMARK 999
VAL
140
3SY7
A
P32722
UNP
163
140
1
expression tag
GLY
421
3SY7
A
P32722
UNP
421
1
expression tag
GLY
422
3SY7
A
P32722
UNP
422
1
expression tag
HIS
423
3SY7
A
P32722
UNP
423
1
expression tag
HIS
424
3SY7
A
P32722
UNP
424
1
expression tag
HIS
425
3SY7
A
P32722
UNP
425
1
expression tag
HIS
426
3SY7
A
P32722
UNP
426
1
expression tag
HIS
427
3SY7
A
P32722
UNP
427
1
expression tag
HIS
428
3SY7
A
P32722
UNP
428
20
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ILE
283
A
ILE
283
A
PHE
285
A
PHE
285
A
LEU
150
A
LEU
150
A
ALA
174
A
ALA
174
A
GLU
179
A
GLU
179
A
THR
194
A
THR
194
A
LEU
197
A
LEU
197
A
LEU
206
A
LEU
206
A
TYR
210
A
TYR
210
A
ALA
224
A
ALA
224
A
GLN
227
A
GLN
227
A
ASP
240
A
ASP
240
A
SER
250
A
SER
250
A
LEU
262
A
LEU
262
A
HIS
265
A
HIS
265
A
GLY
276
A
GLY
276
A
LYS
314
A
LYS
314
A
ASN
323
A
ASN
323
A
LEU
332
A
LEU
332
A
ILE
344
A
ILE
344
A
GLY
365
A
GLY
365
A
VAL
377
A
VAL
377
A
SER
387
A
SER
387
A
ALA
397
A
ALA
397
A
GLN
406
A
GLN
406
A
PRO
416
A
PRO
416
A
SER
18
A
SER
18
A
ASP
31
A
ASP
31
A
ARG
39
A
ARG
39
A
GLU
51
A
GLU
51
A
GLY
60
A
GLY
60
A
GLY
75
A
GLY
75
A
ASP
96
A
ASP
96
A
ILE
108
A
ILE
108
A
THR
111
A
THR
111
A
MET
118
A
MET
118
A
ALA
137
A
ALA
137
A
SER
144
A
SER
144
A
LEU
150
A
LEU
150
A
ALA
174
A
ALA
174
BINDING SITE FOR RESIDUE C8E A 429
A
C8E
429
Software
2
BINDING SITE FOR RESIDUE C8E A 430
A
C8E
430
Software
2
BINDING SITE FOR RESIDUE C8E A 431
A
C8E
431
Software
6
BINDING SITE FOR RESIDUE C8E A 432
A
C8E
432
Software
1
BINDING SITE FOR RESIDUE C8E A 433
A
C8E
433
Software
3
BINDING SITE FOR RESIDUE C8E A 434
A
C8E
434
Software
4
BINDING SITE FOR RESIDUE C8E A 435
A
C8E
435
Software
3
A
ASN
25
A
ASN
25
2
1_555
A
TRP
42
A
TRP
42
2
1_555
A
THR
55
A
THR
55
2
1_555
A
PHE
61
A
PHE
61
2
1_555
A
VAL
63
A
VAL
63
6
1_555
A
GLY
102
A
GLY
102
6
1_555
A
ALA
103
A
ALA
103
6
1_555
A
TRP
115
A
TRP
115
6
1_555
A
GLY
116
A
GLY
116
6
1_555
A
HOH
537
J
HOH
6
1_555
A
SER
98
A
SER
98
1
1_555
A
GLY
155
A
GLY
155
3
1_555
A
PHE
186
A
PHE
186
3
1_555
A
ILE
187
A
ILE
187
3
1_555
A
GLY
189
A
GLY
189
4
1_555
A
TYR
191
A
TYR
191
4
1_555
A
ALA
199
A
ALA
199
4
1_555
A
LEU
201
A
LEU
201
4
1_555
A
LEU
69
A
LEU
69
3
1_556
A
ASP
96
A
ASP
96
3
1_556
A
TYR
213
A
TYR
213
3
1_555
5
C 1 2 1