0.011457 0.006615 0.000000 0.000000 0.013229 0.000000 0.000000 0.000000 0.009855 0.00000 0.00000 0.00000 Joint Center for Structural Genomics (JCSG) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.000 90.000 120.000 87.285 87.285 101.476 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Cl -1 35.453 CHLORIDE ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Cell 1097-4172 165 690 703 10.1016/j.cell.2016.03.016 27062925 A Distinct Type of Pilus from the Human Microbiome. 2016 10.2210/pdb3t2l/pdb pdb_00003t2l 100 1 Vertical focusing mirror; double crystal Si(111) monochromator CCD 2011-07-06 MARMOSAIC 325 mm CCD double crystal Si(111) SINGLE WAVELENGTH M x-ray 1 0.97907 1.0 BL14-1 SSRL 0.97907 SYNCHROTRON SSRL BEAMLINE BL14-1 34372.512 Putative cell adhesion protein 1 man polymer 35.453 CHLORIDE ION 2 syn non-polymer 92.094 GLYCEROL 3 syn non-polymer 18.015 water 150 nat water no yes GSDDRE(MSE)DDGRWKASALRVPLQVSSAVIKQEVVTRLAPDPVPLTEGAIGIFLSGTEPESGQEDSGYKVIDNRKYVY SEGHWGPPTANDTIYLVGNDADVCAYYPYKDSYTDKTVIPLQSQDYVETEDIYYALNT(MSE)INGFTPAITFD(MSE)V HAYSLVELKISRENYF(MSE)PCEISKITLKNSNLIKKGTINIAVDGSIHSSETGNYDLTTVTDASPHTLSVGESYVCRV L(MSE)IPVPLKIERTDAEGGEFGLSVSLVIDGQQ(MSE)LVEIPYSELGEFRQGEKYVIGLKIKGTEIVPTVKALEWED EEVNGGNKYPVE GSDDREMDDGRWKASALRVPLQVSSAVIKQEVVTRLAPDPVPLTEGAIGIFLSGTEPESGQEDSGYKVIDNRKYVYSEGH WGPPTANDTIYLVGNDADVCAYYPYKDSYTDKTVIPLQSQDYVETEDIYYALNTMINGFTPAITFDMVHAYSLVELKISR ENYFMPCEISKITLKNSNLIKKGTINIAVDGSIHSSETGNYDLTTVTDASPHTLSVGESYVCRVLMIPVPLKIERTDAEG GEFGLSVSLVIDGQQMLVEIPYSELGEFRQGEKYVIGLKIKGTEIVPTVKALEWEDEEVNGGNKYPVE A 393159 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n NCTC 9343 sample BF1858 272559 Bacteroides fragilis 562 Escherichia Coli PB1 Plasmid SpeedET 1 3.25 62.11 VAPOR DIFFUSION, SITTING DROP 10.5 1.2M sodium dihydrogen phosphate, 0.8M di-potassium hydrogen phosphate, 0.2M lithium sulfate, 0.1M CAPS pH 10.5, NANODROP', VAPOR DIFFUSION, SITTING DROP, temperature 277K 277 Joint Center for Structural Genomics JCSG PSI:Biology software citation_author citation citation_author struct_conn database_2 struct_ref_seq_dif struct_site repository Initial release Refinement description Database references Database references Derived calculations Database references Derived calculations 1 0 2011-08-10 1 1 2017-11-08 1 2 2018-01-24 1 3 2020-04-22 1 4 2023-02-01 _citation_author.name _citation.journal_abbrev _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_volume _citation.page_first _citation.page_last _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.title _citation.year _struct_conn.pdbx_leaving_atom_flag _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y RCSB Y RCSB 2011-07-22 REL REL CL CHLORIDE ION GOL GLYCEROL HOH water THE CONSTRUCT (RESIDUES 21-327) WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. CL 328 2 CL CL 328 A CL 329 2 CL CL 329 A GOL 330 3 GOL GOL 330 A GOL 331 3 GOL GOL 331 A GOL 332 3 GOL GOL 332 A HOH 333 4 HOH HOH 333 A HOH 334 4 HOH HOH 334 A HOH 335 4 HOH HOH 335 A HOH 336 4 HOH HOH 336 A HOH 337 4 HOH HOH 337 A HOH 338 4 HOH HOH 338 A HOH 339 4 HOH HOH 339 A HOH 340 4 HOH HOH 340 A HOH 341 4 HOH HOH 341 A HOH 342 4 HOH HOH 342 A HOH 343 4 HOH HOH 343 A HOH 344 4 HOH HOH 344 A HOH 345 4 HOH HOH 345 A HOH 346 4 HOH HOH 346 A HOH 347 4 HOH HOH 347 A HOH 348 4 HOH HOH 348 A HOH 349 4 HOH HOH 349 A HOH 350 4 HOH HOH 350 A HOH 351 4 HOH HOH 351 A HOH 352 4 HOH HOH 352 A HOH 353 4 HOH HOH 353 A HOH 354 4 HOH HOH 354 A HOH 355 4 HOH HOH 355 A HOH 356 4 HOH HOH 356 A HOH 357 4 HOH HOH 357 A HOH 358 4 HOH HOH 358 A HOH 359 4 HOH HOH 359 A HOH 360 4 HOH HOH 360 A HOH 361 4 HOH HOH 361 A HOH 362 4 HOH HOH 362 A HOH 363 4 HOH HOH 363 A HOH 364 4 HOH HOH 364 A HOH 365 4 HOH HOH 365 A HOH 366 4 HOH HOH 366 A HOH 367 4 HOH HOH 367 A HOH 368 4 HOH HOH 368 A HOH 369 4 HOH HOH 369 A HOH 370 4 HOH HOH 370 A HOH 371 4 HOH HOH 371 A HOH 372 4 HOH HOH 372 A HOH 373 4 HOH HOH 373 A HOH 374 4 HOH HOH 374 A HOH 375 4 HOH HOH 375 A HOH 376 4 HOH HOH 376 A HOH 377 4 HOH HOH 377 A HOH 378 4 HOH HOH 378 A HOH 379 4 HOH HOH 379 A HOH 380 4 HOH HOH 380 A HOH 381 4 HOH HOH 381 A HOH 382 4 HOH HOH 382 A HOH 383 4 HOH HOH 383 A HOH 384 4 HOH HOH 384 A HOH 385 4 HOH HOH 385 A HOH 386 4 HOH HOH 386 A HOH 387 4 HOH HOH 387 A HOH 388 4 HOH HOH 388 A HOH 389 4 HOH HOH 389 A HOH 390 4 HOH HOH 390 A HOH 391 4 HOH HOH 391 A HOH 392 4 HOH HOH 392 A HOH 393 4 HOH HOH 393 A HOH 394 4 HOH HOH 394 A HOH 395 4 HOH HOH 395 A HOH 396 4 HOH HOH 396 A HOH 397 4 HOH HOH 397 A HOH 398 4 HOH HOH 398 A HOH 399 4 HOH HOH 399 A HOH 400 4 HOH HOH 400 A HOH 401 4 HOH HOH 401 A HOH 402 4 HOH HOH 402 A HOH 403 4 HOH HOH 403 A HOH 404 4 HOH HOH 404 A HOH 405 4 HOH HOH 405 A HOH 406 4 HOH HOH 406 A HOH 407 4 HOH HOH 407 A HOH 408 4 HOH HOH 408 A HOH 409 4 HOH HOH 409 A HOH 410 4 HOH HOH 410 A HOH 411 4 HOH HOH 411 A HOH 412 4 HOH HOH 412 A HOH 413 4 HOH HOH 413 A HOH 414 4 HOH HOH 414 A HOH 415 4 HOH HOH 415 A HOH 416 4 HOH HOH 416 A HOH 417 4 HOH HOH 417 A HOH 418 4 HOH HOH 418 A HOH 419 4 HOH HOH 419 A HOH 420 4 HOH HOH 420 A HOH 421 4 HOH HOH 421 A HOH 422 4 HOH HOH 422 A HOH 423 4 HOH HOH 423 A HOH 424 4 HOH HOH 424 A HOH 425 4 HOH HOH 425 A HOH 426 4 HOH HOH 426 A HOH 427 4 HOH HOH 427 A HOH 428 4 HOH HOH 428 A HOH 429 4 HOH HOH 429 A HOH 430 4 HOH HOH 430 A HOH 431 4 HOH HOH 431 A HOH 432 4 HOH HOH 432 A HOH 433 4 HOH HOH 433 A HOH 434 4 HOH HOH 434 A HOH 435 4 HOH HOH 435 A HOH 436 4 HOH HOH 436 A HOH 437 4 HOH HOH 437 A HOH 438 4 HOH HOH 438 A HOH 439 4 HOH HOH 439 A HOH 440 4 HOH HOH 440 A HOH 441 4 HOH HOH 441 A HOH 442 4 HOH HOH 442 A HOH 443 4 HOH HOH 443 A HOH 444 4 HOH HOH 444 A HOH 445 4 HOH HOH 445 A HOH 446 4 HOH HOH 446 A HOH 447 4 HOH HOH 447 A HOH 448 4 HOH HOH 448 A HOH 449 4 HOH HOH 449 A HOH 450 4 HOH HOH 450 A HOH 451 4 HOH HOH 451 A HOH 452 4 HOH HOH 452 A HOH 453 4 HOH HOH 453 A HOH 454 4 HOH HOH 454 A HOH 455 4 HOH HOH 455 A HOH 456 4 HOH HOH 456 A HOH 457 4 HOH HOH 457 A HOH 458 4 HOH HOH 458 A HOH 459 4 HOH HOH 459 A HOH 460 4 HOH HOH 460 A HOH 461 4 HOH HOH 461 A HOH 462 4 HOH HOH 462 A HOH 463 4 HOH HOH 463 A HOH 464 4 HOH HOH 464 A HOH 465 4 HOH HOH 465 A HOH 466 4 HOH HOH 466 A HOH 467 4 HOH HOH 467 A HOH 468 4 HOH HOH 468 A HOH 469 4 HOH HOH 469 A HOH 470 4 HOH HOH 470 A HOH 471 4 HOH HOH 471 A HOH 472 4 HOH HOH 472 A HOH 473 4 HOH HOH 473 A HOH 474 4 HOH HOH 474 A HOH 475 4 HOH HOH 475 A HOH 476 4 HOH HOH 476 A HOH 477 4 HOH HOH 477 A HOH 478 4 HOH HOH 478 A HOH 479 4 HOH HOH 479 A HOH 480 4 HOH HOH 480 A HOH 481 4 HOH HOH 481 A HOH 482 4 HOH HOH 482 A n 1 0 A n 2 21 A n 3 22 A n 4 23 A n 5 24 A n 6 25 A n 7 26 A n 8 27 A n 9 28 A n 10 29 A n 11 30 A n 12 31 A n 13 32 A n 14 33 A n 15 34 A n 16 35 A LEU 36 n 17 LEU 36 A ARG 37 n 18 ARG 37 A VAL 38 n 19 VAL 38 A PRO 39 n 20 PRO 39 A LEU 40 n 21 LEU 40 A GLN 41 n 22 GLN 41 A VAL 42 n 23 VAL 42 A SER 43 n 24 SER 43 A SER 44 n 25 SER 44 A ALA 45 n 26 ALA 45 A VAL 46 n 27 VAL 46 A ILE 47 n 28 ILE 47 A LYS 48 n 29 LYS 48 A GLN 49 n 30 GLN 49 A GLU 50 n 31 GLU 50 A VAL 51 n 32 VAL 51 A VAL 52 n 33 VAL 52 A THR 53 n 34 THR 53 A ARG 54 n 35 ARG 54 A LEU 55 n 36 LEU 55 A ALA 56 n 37 ALA 56 A PRO 57 n 38 PRO 57 A ASP 58 n 39 ASP 58 A PRO 59 n 40 PRO 59 A VAL 60 n 41 VAL 60 A PRO 61 n 42 PRO 61 A LEU 62 n 43 LEU 62 A THR 63 n 44 THR 63 A GLU 64 n 45 GLU 64 A GLY 65 n 46 GLY 65 A ALA 66 n 47 ALA 66 A ILE 67 n 48 ILE 67 A GLY 68 n 49 GLY 68 A ILE 69 n 50 ILE 69 A PHE 70 n 51 PHE 70 A LEU 71 n 52 LEU 71 A SER 72 n 53 SER 72 A GLY 73 n 54 GLY 73 A THR 74 n 55 THR 74 A GLU 75 n 56 GLU 75 A PRO 76 n 57 PRO 76 A n 58 77 A n 59 78 A n 60 79 A n 61 80 A GLU 81 n 62 GLU 81 A ASP 82 n 63 ASP 82 A SER 83 n 64 SER 83 A GLY 84 n 65 GLY 84 A TYR 85 n 66 TYR 85 A LYS 86 n 67 LYS 86 A VAL 87 n 68 VAL 87 A ILE 88 n 69 ILE 88 A ASP 89 n 70 ASP 89 A ASN 90 n 71 ASN 90 A ARG 91 n 72 ARG 91 A LYS 92 n 73 LYS 92 A TYR 93 n 74 TYR 93 A VAL 94 n 75 VAL 94 A TYR 95 n 76 TYR 95 A SER 96 n 77 SER 96 A GLU 97 n 78 GLU 97 A GLY 98 n 79 GLY 98 A HIS 99 n 80 HIS 99 A TRP 100 n 81 TRP 100 A GLY 101 n 82 GLY 101 A PRO 102 n 83 PRO 102 A PRO 103 n 84 PRO 103 A THR 104 n 85 THR 104 A ALA 105 n 86 ALA 105 A ASN 106 n 87 ASN 106 A ASP 107 n 88 ASP 107 A THR 108 n 89 THR 108 A ILE 109 n 90 ILE 109 A TYR 110 n 91 TYR 110 A LEU 111 n 92 LEU 111 A VAL 112 n 93 VAL 112 A GLY 113 n 94 GLY 113 A ASN 114 n 95 ASN 114 A ASP 115 n 96 ASP 115 A ALA 116 n 97 ALA 116 A ASP 117 n 98 ASP 117 A VAL 118 n 99 VAL 118 A CYS 119 n 100 CYS 119 A ALA 120 n 101 ALA 120 A TYR 121 n 102 TYR 121 A TYR 122 n 103 TYR 122 A PRO 123 n 104 PRO 123 A TYR 124 n 105 TYR 124 A LYS 125 n 106 LYS 125 A ASP 126 n 107 ASP 126 A SER 127 n 108 SER 127 A TYR 128 n 109 TYR 128 A THR 129 n 110 THR 129 A ASP 130 n 111 ASP 130 A LYS 131 n 112 LYS 131 A THR 132 n 113 THR 132 A VAL 133 n 114 VAL 133 A ILE 134 n 115 ILE 134 A PRO 135 n 116 PRO 135 A LEU 136 n 117 LEU 136 A GLN 137 n 118 GLN 137 A SER 138 n 119 SER 138 A GLN 139 n 120 GLN 139 A ASP 140 n 121 ASP 140 A TYR 141 n 122 TYR 141 A VAL 142 n 123 VAL 142 A GLU 143 n 124 GLU 143 A THR 144 n 125 THR 144 A GLU 145 n 126 GLU 145 A ASP 146 n 127 ASP 146 A ILE 147 n 128 ILE 147 A TYR 148 n 129 TYR 148 A TYR 149 n 130 TYR 149 A ALA 150 n 131 ALA 150 A LEU 151 n 132 LEU 151 A ASN 152 n 133 ASN 152 A THR 153 n 134 THR 153 A MSE 154 n 135 MSE 154 A ILE 155 n 136 ILE 155 A ASN 156 n 137 ASN 156 A GLY 157 n 138 GLY 157 A PHE 158 n 139 PHE 158 A THR 159 n 140 THR 159 A PRO 160 n 141 PRO 160 A ALA 161 n 142 ALA 161 A ILE 162 n 143 ILE 162 A THR 163 n 144 THR 163 A PHE 164 n 145 PHE 164 A ASP 165 n 146 ASP 165 A MSE 166 n 147 MSE 166 A VAL 167 n 148 VAL 167 A HIS 168 n 149 HIS 168 A ALA 169 n 150 ALA 169 A TYR 170 n 151 TYR 170 A SER 171 n 152 SER 171 A LEU 172 n 153 LEU 172 A VAL 173 n 154 VAL 173 A GLU 174 n 155 GLU 174 A LEU 175 n 156 LEU 175 A LYS 176 n 157 LYS 176 A ILE 177 n 158 ILE 177 A SER 178 n 159 SER 178 A ARG 179 n 160 ARG 179 A GLU 180 n 161 GLU 180 A ASN 181 n 162 ASN 181 A TYR 182 n 163 TYR 182 A PHE 183 n 164 PHE 183 A MSE 184 n 165 MSE 184 A PRO 185 n 166 PRO 185 A CYS 186 n 167 CYS 186 A GLU 187 n 168 GLU 187 A ILE 188 n 169 ILE 188 A SER 189 n 170 SER 189 A LYS 190 n 171 LYS 190 A ILE 191 n 172 ILE 191 A THR 192 n 173 THR 192 A LEU 193 n 174 LEU 193 A LYS 194 n 175 LYS 194 A ASN 195 n 176 ASN 195 A SER 196 n 177 SER 196 A ASN 197 n 178 ASN 197 A LEU 198 n 179 LEU 198 A ILE 199 n 180 ILE 199 A LYS 200 n 181 LYS 200 A LYS 201 n 182 LYS 201 A GLY 202 n 183 GLY 202 A THR 203 n 184 THR 203 A ILE 204 n 185 ILE 204 A ASN 205 n 186 ASN 205 A ILE 206 n 187 ILE 206 A ALA 207 n 188 ALA 207 A VAL 208 n 189 VAL 208 A ASP 209 n 190 ASP 209 A GLY 210 n 191 GLY 210 A SER 211 n 192 SER 211 A ILE 212 n 193 ILE 212 A HIS 213 n 194 HIS 213 A SER 214 n 195 SER 214 A SER 215 n 196 SER 215 A GLU 216 n 197 GLU 216 A THR 217 n 198 THR 217 A GLY 218 n 199 GLY 218 A ASN 219 n 200 ASN 219 A TYR 220 n 201 TYR 220 A ASP 221 n 202 ASP 221 A LEU 222 n 203 LEU 222 A THR 223 n 204 THR 223 A THR 224 n 205 THR 224 A VAL 225 n 206 VAL 225 A THR 226 n 207 THR 226 A ASP 227 n 208 ASP 227 A ALA 228 n 209 ALA 228 A SER 229 n 210 SER 229 A PRO 230 n 211 PRO 230 A HIS 231 n 212 HIS 231 A THR 232 n 213 THR 232 A LEU 233 n 214 LEU 233 A SER 234 n 215 SER 234 A VAL 235 n 216 VAL 235 A GLY 236 n 217 GLY 236 A GLU 237 n 218 GLU 237 A SER 238 n 219 SER 238 A TYR 239 n 220 TYR 239 A VAL 240 n 221 VAL 240 A CYS 241 n 222 CYS 241 A ARG 242 n 223 ARG 242 A VAL 243 n 224 VAL 243 A LEU 244 n 225 LEU 244 A MSE 245 n 226 MSE 245 A ILE 246 n 227 ILE 246 A PRO 247 n 228 PRO 247 A VAL 248 n 229 VAL 248 A PRO 249 n 230 PRO 249 A LEU 250 n 231 LEU 250 A LYS 251 n 232 LYS 251 A ILE 252 n 233 ILE 252 A GLU 253 n 234 GLU 253 A ARG 254 n 235 ARG 254 A THR 255 n 236 THR 255 A ASP 256 n 237 ASP 256 A ALA 257 n 238 ALA 257 A GLU 258 n 239 GLU 258 A GLY 259 n 240 GLY 259 A GLY 260 n 241 GLY 260 A GLU 261 n 242 GLU 261 A PHE 262 n 243 PHE 262 A GLY 263 n 244 GLY 263 A LEU 264 n 245 LEU 264 A SER 265 n 246 SER 265 A VAL 266 n 247 VAL 266 A SER 267 n 248 SER 267 A LEU 268 n 249 LEU 268 A VAL 269 n 250 VAL 269 A ILE 270 n 251 ILE 270 A ASP 271 n 252 ASP 271 A GLY 272 n 253 GLY 272 A GLN 273 n 254 GLN 273 A GLN 274 n 255 GLN 274 A MSE 275 n 256 MSE 275 A LEU 276 n 257 LEU 276 A VAL 277 n 258 VAL 277 A GLU 278 n 259 GLU 278 A ILE 279 n 260 ILE 279 A PRO 280 n 261 PRO 280 A TYR 281 n 262 TYR 281 A SER 282 n 263 SER 282 A GLU 283 n 264 GLU 283 A LEU 284 n 265 LEU 284 A GLY 285 n 266 GLY 285 A GLU 286 n 267 GLU 286 A PHE 287 n 268 PHE 287 A ARG 288 n 269 ARG 288 A GLN 289 n 270 GLN 289 A GLY 290 n 271 GLY 290 A GLU 291 n 272 GLU 291 A LYS 292 n 273 LYS 292 A TYR 293 n 274 TYR 293 A VAL 294 n 275 VAL 294 A ILE 295 n 276 ILE 295 A GLY 296 n 277 GLY 296 A LEU 297 n 278 LEU 297 A LYS 298 n 279 LYS 298 A ILE 299 n 280 ILE 299 A LYS 300 n 281 LYS 300 A GLY 301 n 282 GLY 301 A THR 302 n 283 THR 302 A GLU 303 n 284 GLU 303 A ILE 304 n 285 ILE 304 A VAL 305 n 286 VAL 305 A PRO 306 n 287 PRO 306 A THR 307 n 288 THR 307 A VAL 308 n 289 VAL 308 A LYS 309 n 290 LYS 309 A ALA 310 n 291 ALA 310 A LEU 311 n 292 LEU 311 A GLU 312 n 293 GLU 312 A TRP 313 n 294 TRP 313 A GLU 314 n 295 GLU 314 A ASP 315 n 296 ASP 315 A GLU 316 n 297 GLU 316 A n 298 317 A n 299 318 A n 300 319 A n 301 320 A n 302 321 A n 303 322 A n 304 323 A n 305 324 A n 306 325 A n 307 326 A n 308 327 A 1.1561 0.3468 -1.6269 0.5952 -0.7913 3.6932 -0.0771 -0.0410 -0.0613 -0.0552 0.0325 0.0864 0.2819 -0.2186 0.0446 -0.1047 -0.0714 0.0274 -0.0669 0.0233 -0.0860 refined -0.6245 26.1557 3.4238 X-RAY DIFFRACTION A 36 A 316 X-RAY DIFFRACTION 1 { A|36 - 316 } author_and_software_defined_assembly PISA 2 dimeric 6570 -61 27020 A MSE 154 SELENOMETHIONINE A MSE 135 MET A MSE 166 SELENOMETHIONINE A MSE 147 MET A MSE 184 SELENOMETHIONINE A MSE 165 MET A MSE 245 SELENOMETHIONINE A MSE 226 MET A MSE 275 SELENOMETHIONINE A MSE 256 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -0.5000000000 -0.8660254038 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 6_555 -x,-x+y,-z+2/3 crystal symmetry operation 0.0000000000 0.0000000000 67.6506666667 A N VAL 38 A N VAL 19 A O LEU 111 A O LEU 92 A O VAL 60 A O VAL 41 A N ILE 47 A N ILE 28 A N GLN 41 A N GLN 22 A O ILE 162 A O ILE 143 A O VAL 167 A O VAL 148 A N TYR 149 A N TYR 130 A O ILE 155 A O ILE 136 A N ALA 116 A N ALA 97 A O ASP 117 A O ASP 98 A N SER 72 A N SER 53 A N ILE 69 A N ILE 50 A O ARG 91 A O ARG 72 A N SER 96 A N SER 77 A O HIS 99 A O HIS 80 A N LEU 136 A N LEU 117 A O GLY 202 A O GLY 183 A N THR 203 A N THR 184 A O HIS 213 A O HIS 194 A N GLN 139 A N GLN 120 A O LEU 244 A O LEU 225 A O CYS 241 A O CYS 222 A N LEU 175 A N LEU 156 A N GLU 174 A N GLU 155 A O ILE 295 A O ILE 276 A O TYR 220 A O TYR 201 A N LEU 193 A N LEU 174 A N LYS 194 A N LYS 175 A O SER 265 A O SER 246 A O PHE 262 A O PHE 243 A N ARG 254 A N ARG 235 A O HIS 231 A O HIS 212 A N ILE 188 A N ILE 169 A N LYS 194 A N LYS 175 A O SER 265 A O SER 246 A N LEU 264 A N LEU 245 A O ILE 279 A O ILE 260 A N VAL 248 A N VAL 229 A O PHE 287 A O PHE 268 1 A CG GLU 81 A CG GLU 62 1 Y 1 A CD GLU 81 A CD GLU 62 1 Y 1 A OE1 GLU 81 A OE1 GLU 62 1 Y 1 A OE2 GLU 81 A OE2 GLU 62 1 Y 1 A GLY 0 A GLY 1 1 Y 1 A SER 21 A SER 2 1 Y 1 A ASP 22 A ASP 3 1 Y 1 A ASP 23 A ASP 4 1 Y 1 A ARG 24 A ARG 5 1 Y 1 A GLU 25 A GLU 6 1 Y 1 A MSE 26 A MSE 7 1 Y 1 A ASP 27 A ASP 8 1 Y 1 A ASP 28 A ASP 9 1 Y 1 A GLY 29 A GLY 10 1 Y 1 A ARG 30 A ARG 11 1 Y 1 A TRP 31 A TRP 12 1 Y 1 A LYS 32 A LYS 13 1 Y 1 A ALA 33 A ALA 14 1 Y 1 A SER 34 A SER 15 1 Y 1 A ALA 35 A ALA 16 1 Y 1 A GLU 77 A GLU 58 1 Y 1 A SER 78 A SER 59 1 Y 1 A GLY 79 A GLY 60 1 Y 1 A GLN 80 A GLN 61 1 Y 1 A GLU 317 A GLU 298 1 Y 1 A VAL 318 A VAL 299 1 Y 1 A ASN 319 A ASN 300 1 Y 1 A GLY 320 A GLY 301 1 Y 1 A GLY 321 A GLY 302 1 Y 1 A ASN 322 A ASN 303 1 Y 1 A LYS 323 A LYS 304 1 Y 1 A TYR 324 A TYR 305 1 Y 1 A PRO 325 A PRO 306 1 Y 1 A VAL 326 A VAL 307 1 Y 1 A GLU 327 A GLU 308 1 Y 1 A PRO 57 -76.15 -167.28 1 A ASN 195 -179.28 136.22 1 A SER 229 -114.44 72.13 181.580 57.8296 22.350 -7.0497 0.0000 0.0000 -7.0497 0.0000 14.0994 0.9428 0.9226 1. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 2. GLYCEROL (GOL) AND CHLORIDE MODELED ARE PRESENT IN PROTEIN BUFFER/CRYO BUFFERS. 3. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 4. THE SAD PHASES WERE USED AS RESTRAINTS DURING REFINEMENT. 0.2192 0.1754 0.1775 2.3300 28.571 993 19509 5.0900 1.000 0.500 RANDOM 1 THROUGHOUT 0.000 SAD 2.3300 28.571 150 2326 20 0 2156 1045 SINUSOIDAL 2.000 58 HARMONIC 2.000 325 HARMONIC 5.000 2263 HARMONIC 20.000 0 SEMIHARMONIC 5.000 307 SEMIHARMONIC 5.000 2387 SEMIHARMONIC 4.000 0.010 2263 HARMONIC 2.000 1.080 3085 HARMONIC 2.000 3.920 2.630 0.2409 0.1949 0.1973 2.4600 152 2651 2803 10 5.4200 54.212 2.33 28.571 3T2L 19607 -3.000 0.068 1 22.780 14.52 99.700 0.945 2.330 2.410 2.67 27234 3542 1 99.700 0.766 2.410 2.510 3.2 29526 3835 1 99.700 0.572 2.510 2.620 4.3 27364 3567 1 99.700 0.403 2.620 2.760 6.1 29125 3785 1 99.800 0.254 2.760 2.930 9.1 28253 3678 1 99.800 0.139 2.930 3.160 15.8 28679 3769 1 99.900 0.082 3.160 3.480 24.5 28646 3733 1 99.900 0.046 3.480 3.980 40.3 28545 3695 1 99.900 0.031 3.980 5.000 57.3 28134 3670 1 100.000 0.023 5.000 28.57 63.8 29115 3759 1 99.100 model building D.C. & J.S. Richardson lab molprobity@kinemage.biochem.duke.edu http://kinemage.biochem.duke.edu/molprobity/ MolProbity package 3beta29 data extraction PDB deposit@deposit.rcsb.org June 10, 2010 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.10 phasing George M. Sheldrick gsheldr@shelx.uni-ac.gwdg.de Fortran_77 http://shelx.uni-ac.gwdg.de/SHELX/ SHELX package phasing Eric de La Fortelle sharp-develop@globalphasing.com http://www.globalphasing.com/sharp/ SHARP package data scaling Wolfgang Kabsch http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html XSCALE package December 6, 2010 refinement Gerard Bricogne buster-develop@GlobalPhasing.com http://www.globalphasing.com/buster/ BUSTER-TNT program 2.8.0 data reduction XDS phasing SHELXD refinement BUSTER 2.8.0 Crystal structure of a Putative cell adhesion protein (BF1858) from Bacteroides fragilis NCTC 9343 at 2.33 A resolution 1 N N 2 N N 2 N N 3 N N 3 N N 3 N N 4 N N A THR 104 A THR 85 HELX_P A THR 108 A THR 89 5 1 5 A VAL 142 A VAL 123 HELX_P A ASP 146 A ASP 127 5 2 5 covale 1.341 both A THR 153 A C THR 134 1_555 A MSE 154 A N MSE 135 1_555 covale 1.326 both A MSE 154 A C MSE 135 1_555 A ILE 155 A N ILE 136 1_555 covale 1.341 both A ASP 165 A C ASP 146 1_555 A MSE 166 A N MSE 147 1_555 covale 1.322 both A MSE 166 A C MSE 147 1_555 A VAL 167 A N VAL 148 1_555 covale 1.333 both A PHE 183 A C PHE 164 1_555 A MSE 184 A N MSE 165 1_555 covale 1.360 both A MSE 184 A C MSE 165 1_555 A PRO 185 A N PRO 166 1_555 covale 1.337 both A LEU 244 A C LEU 225 1_555 A MSE 245 A N MSE 226 1_555 covale 1.349 both A MSE 245 A C MSE 226 1_555 A ILE 246 A N ILE 227 1_555 covale 1.335 both A GLN 274 A C GLN 255 1_555 A MSE 275 A N MSE 256 1_555 covale 1.337 both A MSE 275 A C MSE 256 1_555 A LEU 276 A N LEU 257 1_555 CELL ADHESION Prealbumin-like fold, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, CELL ADHESION A TYR 122 A TYR 103 1 A PRO 123 A PRO 104 -8.49 Q5LE95_BACFN UNP 1 21 Q5LE95 SDDREMDDGRWKASALRVPLQVSSAVIKQEVVTRLAPDPVPLTEGAIGIFLSGTEPESGQEDSGYKVIDNRKYVYSEGHW GPPTANDTIYLVGNDADVCAYYPYKDSYTDKTVIPLQSQDYVETEDIYYALNTMINGFTPAITFDMVHAYSLVELKISRE NYFMPCEISKITLKNSNLIKKGTINIAVDGSIHSSETGNYDLTTVTDASPHTLSVGESYVCRVLMIPVPLKIERTDAEGG EFGLSVSLVIDGQQMLVEIPYSELGEFRQGEKYVIGLKIKGTEIVPTVKALEWEDEEVNGGNKYPVE 21 327 3T2L 21 327 Q5LE95 A 1 2 308 1 expression tag GLY 0 3T2L A Q5LE95 UNP 1 2 8 3 4 4 4 2 anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A VAL 38 A VAL 19 A PRO 39 A PRO 20 A TYR 110 A TYR 91 A LEU 111 A LEU 92 A VAL 60 A VAL 41 A PRO 61 A PRO 42 A GLN 41 A GLN 22 A ILE 47 A ILE 28 A ALA 161 A ALA 142 A HIS 168 A HIS 149 A TYR 148 A TYR 129 A ILE 155 A ILE 136 A ALA 116 A ALA 97 A TYR 122 A TYR 103 A ALA 66 A ALA 47 A GLY 73 A GLY 54 A ILE 88 A ILE 69 A SER 96 A SER 77 A HIS 99 A HIS 80 A GLY 101 A GLY 82 A ILE 134 A ILE 115 A GLN 137 A GLN 118 A ILE 199 A ILE 180 A ILE 204 A ILE 185 A ILE 212 A ILE 193 A THR 217 A THR 198 A GLN 139 A GLN 120 A ASP 140 A ASP 121 A TYR 239 A TYR 220 A MSE 245 A MSE 226 A SER 171 A SER 152 A GLU 180 A GLU 161 A LYS 292 A LYS 273 A LYS 300 A LYS 281 A TYR 220 A TYR 201 A ASP 221 A ASP 202 A GLU 187 A GLU 168 A LYS 194 A LYS 175 A GLU 261 A GLU 242 A ILE 270 A ILE 251 A ARG 254 A ARG 235 A THR 255 A THR 236 A HIS 231 A HIS 212 A THR 232 A THR 213 A GLU 187 A GLU 168 A LYS 194 A LYS 175 A GLU 261 A GLU 242 A ILE 270 A ILE 251 A GLN 273 A GLN 254 A PRO 280 A PRO 261 A VAL 248 A VAL 229 A PRO 249 A PRO 230 A GLU 286 A GLU 267 A PHE 287 A PHE 268 BINDING SITE FOR RESIDUE CL A 328 A CL 328 Software 3 BINDING SITE FOR RESIDUE CL A 329 A CL 329 Software 1 BINDING SITE FOR RESIDUE GOL A 330 A GOL 330 Software 5 BINDING SITE FOR RESIDUE GOL A 331 A GOL 331 Software 4 BINDING SITE FOR RESIDUE GOL A 332 A GOL 332 Software 9 A LEU 172 A LEU 153 3 1_555 A ARG 242 A ARG 223 3 1_555 A GOL 330 D GOL 3 1_555 A ARG 37 A ARG 18 1 1_555 A GLU 174 A GLU 155 5 1_555 A LYS 176 A LYS 157 5 1_555 A LYS 292 A LYS 273 5 1_555 A ASP 315 A ASP 296 5 6_555 A CL 328 B CL 5 1_555 A ASN 181 A ASN 162 4 1_555 A MSE 275 A MSE 256 4 6_555 A LEU 276 A LEU 257 4 6_555 A ILE 304 A ILE 285 4 1_555 A SER 127 A SER 108 9 1_555 A TYR 128 A TYR 109 9 1_555 A THR 129 A THR 110 9 1_555 A ASP 130 A ASP 111 9 1_555 A VAL 133 A VAL 114 9 1_555 A ILE 134 A ILE 115 9 1_555 A THR 223 A THR 204 9 4_555 A SER 229 A SER 210 9 4_555 A HOH 480 G HOH 9 1_555 154 P 32 2 1