0.008400
0.000000
0.000000
0.000000
0.008249
0.000000
0.000000
0.000000
0.008138
0.000000
0.000000
0.000000
Erdemli, S.
Bianchet, M.A.
Gupta, R.
Lamichhane, G.
Amzel, L.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.000
90.000
90.000
119.044
121.223
122.884
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O3 S
137.158
n
S-HYDROXYCYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C4 H10 O3
106.120
DI(HYDROXYETHYL)ETHER
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
Structure
STRUE6
2005
0969-2126
20
2103
2115
10.1016/j.str.2012.09.016
23103390
Targeting the Cell Wall of Mycobacterium tuberculosis: Structure and Mechanism of L,D-Transpeptidase 2.
2012
100
1
CCD
2009
RIGAKU SATURN 944+
VARIMAX
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
OTHER
31143.539
Mycobacteria Tuberculosis LD-transpeptidase type 2
2
man
polymer
106.120
DI(HYDROXYETHYL)ETHER
2
syn
non-polymer
18.015
water
154
nat
water
no
yes
RRYTLNATALGLGGAATRQLTFQTSSPAHLTMPYVMPGDGEVVGVGEPVAIRFDENIADRGAAEKAIKITTNPPVEGAFY
WLNNREVRWRPEHFWKPGTAVDVAVNTYGVDLGEGMFGEDNVQTHFTIGDEVIATADDNTKILTVRVNGEVVKSMPTSMG
KDSTPTANGIYIVGSRYKHIIMDSSTYGVPVNSPNGYRTDVDWATQISYSGVFVHSAPWSVGAQGHTNTSHG(CSO)LNV
SPSNAQWFYDHVKRGDIVEVVNTVGGTLPGIDGLGDWNIPWDQWRAGNAKA
RRYTLNATALGLGGAATRQLTFQTSSPAHLTMPYVMPGDGEVVGVGEPVAIRFDENIADRGAAEKAIKITTNPPVEGAFY
WLNNREVRWRPEHFWKPGTAVDVAVNTYGVDLGEGMFGEDNVQTHFTIGDEVIATADDNTKILTVRVNGEVVKSMPTSMG
KDSTPTANGIYIVGSRYKHIIMDSSTYGVPVNSPNGYRTDVDWATQISYSGVFVHSAPWSVGAQGHTNTSHGCLNVSPSN
AQWFYDHVKRGDIVEVVNTVGGTLPGIDGLGDWNIPWDQWRAGNAKA
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
lppS, MT2594, Rv2518c
1773
Mycobacterium tuberculosis
562
Escherichia coli
BL21
plasmid
1
3.56
65.44
VAPOR DIFFUSION, HANGING DROP
7.5
0.1 M Hepes (pH 7.5), 1 M succinic Acid, 1% (w/v) PEG MME 2000, temperature 298K, VAPOR DIFFUSION, HANGING DROP
298
diffrn_source
repository
Initial release
Database references
Database references
Data collection
1
0
2012-12-05
1
1
2012-12-12
1
2
2012-12-26
1
3
2018-04-04
_diffrn_source.type
RCSB
Y
RCSB
2011-09-30
REL
REL
PEG
DI(HYDROXYETHYL)ETHER
HOH
water
PEG
2
2
PEG
PEG
501
A
PEG
1
2
PEG
PEG
501
B
HOH
1
3
HOH
HOH
601
A
HOH
2
3
HOH
HOH
602
A
HOH
5
3
HOH
HOH
603
A
HOH
14
3
HOH
HOH
604
A
HOH
15
3
HOH
HOH
605
A
HOH
17
3
HOH
HOH
606
A
HOH
18
3
HOH
HOH
607
A
HOH
26
3
HOH
HOH
608
A
HOH
28
3
HOH
HOH
609
A
HOH
31
3
HOH
HOH
610
A
HOH
32
3
HOH
HOH
611
A
HOH
33
3
HOH
HOH
612
A
HOH
41
3
HOH
HOH
613
A
HOH
43
3
HOH
HOH
614
A
HOH
47
3
HOH
HOH
615
A
HOH
65
3
HOH
HOH
616
A
HOH
68
3
HOH
HOH
617
A
HOH
96
3
HOH
HOH
618
A
HOH
111
3
HOH
HOH
619
A
HOH
113
3
HOH
HOH
620
A
HOH
125
3
HOH
HOH
621
A
HOH
131
3
HOH
HOH
622
A
HOH
132
3
HOH
HOH
623
A
HOH
145
3
HOH
HOH
624
A
HOH
151
3
HOH
HOH
625
A
HOH
167
3
HOH
HOH
626
A
HOH
207
3
HOH
HOH
627
A
HOH
221
3
HOH
HOH
628
A
HOH
222
3
HOH
HOH
629
A
HOH
223
3
HOH
HOH
630
A
HOH
224
3
HOH
HOH
631
A
HOH
225
3
HOH
HOH
632
A
HOH
226
3
HOH
HOH
633
A
HOH
228
3
HOH
HOH
634
A
HOH
229
3
HOH
HOH
635
A
HOH
232
3
HOH
HOH
636
A
HOH
233
3
HOH
HOH
637
A
HOH
235
3
HOH
HOH
638
A
HOH
239
3
HOH
HOH
639
A
HOH
240
3
HOH
HOH
640
A
HOH
246
3
HOH
HOH
641
A
HOH
252
3
HOH
HOH
642
A
HOH
253
3
HOH
HOH
643
A
HOH
254
3
HOH
HOH
644
A
HOH
255
3
HOH
HOH
645
A
HOH
258
3
HOH
HOH
646
A
HOH
259
3
HOH
HOH
647
A
HOH
260
3
HOH
HOH
648
A
HOH
261
3
HOH
HOH
649
A
HOH
262
3
HOH
HOH
650
A
HOH
263
3
HOH
HOH
651
A
HOH
269
3
HOH
HOH
652
A
HOH
273
3
HOH
HOH
653
A
HOH
274
3
HOH
HOH
654
A
HOH
277
3
HOH
HOH
655
A
HOH
279
3
HOH
HOH
656
A
HOH
282
3
HOH
HOH
657
A
HOH
3
3
HOH
HOH
658
A
HOH
5
3
HOH
HOH
659
A
HOH
12
3
HOH
HOH
660
A
HOH
17
3
HOH
HOH
661
A
HOH
18
3
HOH
HOH
662
A
HOH
29
3
HOH
HOH
663
A
HOH
71
3
HOH
HOH
664
A
HOH
81
3
HOH
HOH
665
A
HOH
110
3
HOH
HOH
666
A
HOH
178
3
HOH
HOH
667
A
HOH
5
3
HOH
HOH
668
A
HOH
10
3
HOH
HOH
669
A
HOH
42
3
HOH
HOH
670
A
HOH
81
3
HOH
HOH
671
A
HOH
10
3
HOH
HOH
672
A
HOH
145
3
HOH
HOH
673
A
HOH
25
3
HOH
HOH
674
A
HOH
71
3
HOH
HOH
675
A
HOH
150
3
HOH
HOH
676
A
HOH
3
3
HOH
HOH
601
B
HOH
4
3
HOH
HOH
602
B
HOH
6
3
HOH
HOH
603
B
HOH
7
3
HOH
HOH
604
B
HOH
9
3
HOH
HOH
605
B
HOH
12
3
HOH
HOH
606
B
HOH
13
3
HOH
HOH
607
B
HOH
16
3
HOH
HOH
608
B
HOH
21
3
HOH
HOH
609
B
HOH
23
3
HOH
HOH
610
B
HOH
30
3
HOH
HOH
611
B
HOH
36
3
HOH
HOH
612
B
HOH
42
3
HOH
HOH
613
B
HOH
48
3
HOH
HOH
614
B
HOH
69
3
HOH
HOH
615
B
HOH
75
3
HOH
HOH
616
B
HOH
77
3
HOH
HOH
617
B
HOH
90
3
HOH
HOH
618
B
HOH
101
3
HOH
HOH
619
B
HOH
103
3
HOH
HOH
620
B
HOH
107
3
HOH
HOH
621
B
HOH
119
3
HOH
HOH
622
B
HOH
123
3
HOH
HOH
623
B
HOH
140
3
HOH
HOH
624
B
HOH
191
3
HOH
HOH
625
B
HOH
192
3
HOH
HOH
626
B
HOH
209
3
HOH
HOH
627
B
HOH
211
3
HOH
HOH
628
B
HOH
215
3
HOH
HOH
629
B
HOH
218
3
HOH
HOH
630
B
HOH
219
3
HOH
HOH
631
B
HOH
220
3
HOH
HOH
632
B
HOH
227
3
HOH
HOH
633
B
HOH
230
3
HOH
HOH
634
B
HOH
231
3
HOH
HOH
635
B
HOH
236
3
HOH
HOH
636
B
HOH
238
3
HOH
HOH
637
B
HOH
241
3
HOH
HOH
638
B
HOH
242
3
HOH
HOH
639
B
HOH
243
3
HOH
HOH
640
B
HOH
245
3
HOH
HOH
641
B
HOH
249
3
HOH
HOH
642
B
HOH
250
3
HOH
HOH
643
B
HOH
256
3
HOH
HOH
644
B
HOH
257
3
HOH
HOH
645
B
HOH
264
3
HOH
HOH
646
B
HOH
265
3
HOH
HOH
647
B
HOH
266
3
HOH
HOH
648
B
HOH
267
3
HOH
HOH
649
B
HOH
268
3
HOH
HOH
650
B
HOH
275
3
HOH
HOH
651
B
HOH
276
3
HOH
HOH
652
B
HOH
2
3
HOH
HOH
653
B
HOH
21
3
HOH
HOH
654
B
HOH
25
3
HOH
HOH
655
B
HOH
40
3
HOH
HOH
656
B
HOH
64
3
HOH
HOH
657
B
HOH
65
3
HOH
HOH
658
B
HOH
67
3
HOH
HOH
659
B
HOH
78
3
HOH
HOH
660
B
HOH
91
3
HOH
HOH
661
B
HOH
111
3
HOH
HOH
662
B
HOH
112
3
HOH
HOH
663
B
HOH
116
3
HOH
HOH
664
B
HOH
120
3
HOH
HOH
665
B
HOH
128
3
HOH
HOH
666
B
HOH
152
3
HOH
HOH
667
B
HOH
11
3
HOH
HOH
668
B
HOH
45
3
HOH
HOH
669
B
HOH
63
3
HOH
HOH
670
B
HOH
82
3
HOH
HOH
671
B
HOH
99
3
HOH
HOH
672
B
HOH
112
3
HOH
HOH
673
B
HOH
147
3
HOH
HOH
674
B
HOH
21
3
HOH
HOH
675
B
HOH
76
3
HOH
HOH
676
B
HOH
72
3
HOH
HOH
677
B
HOH
43
3
HOH
HOH
678
B
n
1
122
A
ALA
123
n
2
ARG
123
A
TYR
124
n
3
TYR
124
A
THR
125
n
4
THR
125
A
LEU
126
n
5
LEU
126
A
ASN
127
n
6
ASN
127
A
ALA
128
n
7
ALA
128
A
THR
129
n
8
THR
129
A
ALA
130
n
9
ALA
130
A
n
10
131
A
n
11
132
A
n
12
133
A
n
13
134
A
n
14
135
A
n
15
136
A
n
16
137
A
n
17
138
A
n
18
139
A
n
19
140
A
n
20
141
A
n
21
142
A
n
22
143
A
n
23
144
A
n
24
145
A
n
25
146
A
n
26
147
A
n
27
148
A
n
28
149
A
HIS
150
n
29
HIS
150
A
LEU
151
n
30
LEU
151
A
THR
152
n
31
THR
152
A
MET
153
n
32
MET
153
A
PRO
154
n
33
PRO
154
A
TYR
155
n
34
TYR
155
A
VAL
156
n
35
VAL
156
A
MET
157
n
36
MET
157
A
PRO
158
n
37
PRO
158
A
GLY
159
n
38
GLY
159
A
ASP
160
n
39
ASP
160
A
GLY
161
n
40
GLY
161
A
GLU
162
n
41
GLU
162
A
VAL
163
n
42
VAL
163
A
VAL
164
n
43
VAL
164
A
GLY
165
n
44
GLY
165
A
VAL
166
n
45
VAL
166
A
GLY
167
n
46
GLY
167
A
GLU
168
n
47
GLU
168
A
PRO
169
n
48
PRO
169
A
VAL
170
n
49
VAL
170
A
ALA
171
n
50
ALA
171
A
ILE
172
n
51
ILE
172
A
ARG
173
n
52
ARG
173
A
PHE
174
n
53
PHE
174
A
ASP
175
n
54
ASP
175
A
GLU
176
n
55
GLU
176
A
ASN
177
n
56
ASN
177
A
ILE
178
n
57
ILE
178
A
ALA
179
n
58
ALA
179
A
ASP
180
n
59
ASP
180
A
ARG
181
n
60
ARG
181
A
GLY
182
n
61
GLY
182
A
ALA
183
n
62
ALA
183
A
ALA
184
n
63
ALA
184
A
GLU
185
n
64
GLU
185
A
LYS
186
n
65
LYS
186
A
ALA
187
n
66
ALA
187
A
ILE
188
n
67
ILE
188
A
LYS
189
n
68
LYS
189
A
ILE
190
n
69
ILE
190
A
THR
191
n
70
THR
191
A
THR
192
n
71
THR
192
A
ASN
193
n
72
ASN
193
A
PRO
194
n
73
PRO
194
A
PRO
195
n
74
PRO
195
A
VAL
196
n
75
VAL
196
A
GLU
197
n
76
GLU
197
A
GLY
198
n
77
GLY
198
A
ALA
199
n
78
ALA
199
A
PHE
200
n
79
PHE
200
A
TYR
201
n
80
TYR
201
A
TRP
202
n
81
TRP
202
A
LEU
203
n
82
LEU
203
A
ASN
204
n
83
ASN
204
A
ASN
205
n
84
ASN
205
A
ARG
206
n
85
ARG
206
A
GLU
207
n
86
GLU
207
A
VAL
208
n
87
VAL
208
A
ARG
209
n
88
ARG
209
A
TRP
210
n
89
TRP
210
A
ARG
211
n
90
ARG
211
A
PRO
212
n
91
PRO
212
A
GLU
213
n
92
GLU
213
A
HIS
214
n
93
HIS
214
A
PHE
215
n
94
PHE
215
A
TRP
216
n
95
TRP
216
A
LYS
217
n
96
LYS
217
A
PRO
218
n
97
PRO
218
A
GLY
219
n
98
GLY
219
A
THR
220
n
99
THR
220
A
ALA
221
n
100
ALA
221
A
VAL
222
n
101
VAL
222
A
ASP
223
n
102
ASP
223
A
VAL
224
n
103
VAL
224
A
ALA
225
n
104
ALA
225
A
VAL
226
n
105
VAL
226
A
ASN
227
n
106
ASN
227
A
THR
228
n
107
THR
228
A
TYR
229
n
108
TYR
229
A
GLY
230
n
109
GLY
230
A
VAL
231
n
110
VAL
231
A
ASP
232
n
111
ASP
232
A
LEU
233
n
112
LEU
233
A
GLY
234
n
113
GLY
234
A
GLU
235
n
114
GLU
235
A
GLY
236
n
115
GLY
236
A
MET
237
n
116
MET
237
A
PHE
238
n
117
PHE
238
A
GLY
239
n
118
GLY
239
A
GLU
240
n
119
GLU
240
A
ASP
241
n
120
ASP
241
A
ASN
242
n
121
ASN
242
A
VAL
243
n
122
VAL
243
A
GLN
244
n
123
GLN
244
A
THR
245
n
124
THR
245
A
HIS
246
n
125
HIS
246
A
PHE
247
n
126
PHE
247
A
THR
248
n
127
THR
248
A
ILE
249
n
128
ILE
249
A
GLY
250
n
129
GLY
250
A
ASP
251
n
130
ASP
251
A
GLU
252
n
131
GLU
252
A
VAL
253
n
132
VAL
253
A
ILE
254
n
133
ILE
254
A
ALA
255
n
134
ALA
255
A
THR
256
n
135
THR
256
A
ALA
257
n
136
ALA
257
A
ASP
258
n
137
ASP
258
A
ASP
259
n
138
ASP
259
A
ASN
260
n
139
ASN
260
A
THR
261
n
140
THR
261
A
LYS
262
n
141
LYS
262
A
ILE
263
n
142
ILE
263
A
LEU
264
n
143
LEU
264
A
THR
265
n
144
THR
265
A
VAL
266
n
145
VAL
266
A
ARG
267
n
146
ARG
267
A
VAL
268
n
147
VAL
268
A
ASN
269
n
148
ASN
269
A
GLY
270
n
149
GLY
270
A
GLU
271
n
150
GLU
271
A
VAL
272
n
151
VAL
272
A
VAL
273
n
152
VAL
273
A
LYS
274
n
153
LYS
274
A
SER
275
n
154
SER
275
A
MET
276
n
155
MET
276
A
PRO
277
n
156
PRO
277
A
THR
278
n
157
THR
278
A
SER
279
n
158
SER
279
A
MET
280
n
159
MET
280
A
GLY
281
n
160
GLY
281
A
LYS
282
n
161
LYS
282
A
ASP
283
n
162
ASP
283
A
SER
284
n
163
SER
284
A
THR
285
n
164
THR
285
A
PRO
286
n
165
PRO
286
A
THR
287
n
166
THR
287
A
ALA
288
n
167
ALA
288
A
ASN
289
n
168
ASN
289
A
GLY
290
n
169
GLY
290
A
ILE
291
n
170
ILE
291
A
TYR
292
n
171
TYR
292
A
ILE
293
n
172
ILE
293
A
VAL
294
n
173
VAL
294
A
GLY
295
n
174
GLY
295
A
SER
296
n
175
SER
296
A
ARG
297
n
176
ARG
297
A
TYR
298
n
177
TYR
298
A
LYS
299
n
178
LYS
299
A
HIS
300
n
179
HIS
300
A
ILE
301
n
180
ILE
301
A
ILE
302
n
181
ILE
302
A
MET
303
n
182
MET
303
A
ASP
304
n
183
ASP
304
A
SER
305
n
184
SER
305
A
SER
306
n
185
SER
306
A
THR
307
n
186
THR
307
A
TYR
308
n
187
TYR
308
A
GLY
309
n
188
GLY
309
A
VAL
310
n
189
VAL
310
A
PRO
311
n
190
PRO
311
A
VAL
312
n
191
VAL
312
A
ASN
313
n
192
ASN
313
A
SER
314
n
193
SER
314
A
PRO
315
n
194
PRO
315
A
ASN
316
n
195
ASN
316
A
GLY
317
n
196
GLY
317
A
TYR
318
n
197
TYR
318
A
ARG
319
n
198
ARG
319
A
THR
320
n
199
THR
320
A
ASP
321
n
200
ASP
321
A
VAL
322
n
201
VAL
322
A
ASP
323
n
202
ASP
323
A
TRP
324
n
203
TRP
324
A
ALA
325
n
204
ALA
325
A
THR
326
n
205
THR
326
A
GLN
327
n
206
GLN
327
A
ILE
328
n
207
ILE
328
A
SER
329
n
208
SER
329
A
TYR
330
n
209
TYR
330
A
SER
331
n
210
SER
331
A
GLY
332
n
211
GLY
332
A
VAL
333
n
212
VAL
333
A
PHE
334
n
213
PHE
334
A
VAL
335
n
214
VAL
335
A
HIS
336
n
215
HIS
336
A
SER
337
n
216
SER
337
A
ALA
338
n
217
ALA
338
A
PRO
339
n
218
PRO
339
A
TRP
340
n
219
TRP
340
A
SER
341
n
220
SER
341
A
VAL
342
n
221
VAL
342
A
GLY
343
n
222
GLY
343
A
ALA
344
n
223
ALA
344
A
GLN
345
n
224
GLN
345
A
GLY
346
n
225
GLY
346
A
HIS
347
n
226
HIS
347
A
THR
348
n
227
THR
348
A
ASN
349
n
228
ASN
349
A
THR
350
n
229
THR
350
A
SER
351
n
230
SER
351
A
HIS
352
n
231
HIS
352
A
GLY
353
n
232
GLY
353
A
CSO
354
n
233
CSO
354
A
LEU
355
n
234
LEU
355
A
ASN
356
n
235
ASN
356
A
VAL
357
n
236
VAL
357
A
SER
358
n
237
SER
358
A
PRO
359
n
238
PRO
359
A
SER
360
n
239
SER
360
A
ASN
361
n
240
ASN
361
A
ALA
362
n
241
ALA
362
A
GLN
363
n
242
GLN
363
A
TRP
364
n
243
TRP
364
A
PHE
365
n
244
PHE
365
A
TYR
366
n
245
TYR
366
A
ASP
367
n
246
ASP
367
A
HIS
368
n
247
HIS
368
A
VAL
369
n
248
VAL
369
A
LYS
370
n
249
LYS
370
A
ARG
371
n
250
ARG
371
A
GLY
372
n
251
GLY
372
A
ASP
373
n
252
ASP
373
A
ILE
374
n
253
ILE
374
A
VAL
375
n
254
VAL
375
A
GLU
376
n
255
GLU
376
A
VAL
377
n
256
VAL
377
A
VAL
378
n
257
VAL
378
A
ASN
379
n
258
ASN
379
A
THR
380
n
259
THR
380
A
VAL
381
n
260
VAL
381
A
GLY
382
n
261
GLY
382
A
GLY
383
n
262
GLY
383
A
THR
384
n
263
THR
384
A
LEU
385
n
264
LEU
385
A
PRO
386
n
265
PRO
386
A
GLY
387
n
266
GLY
387
A
ILE
388
n
267
ILE
388
A
ASP
389
n
268
ASP
389
A
GLY
390
n
269
GLY
390
A
LEU
391
n
270
LEU
391
A
GLY
392
n
271
GLY
392
A
ASP
393
n
272
ASP
393
A
TRP
394
n
273
TRP
394
A
ASN
395
n
274
ASN
395
A
ILE
396
n
275
ILE
396
A
PRO
397
n
276
PRO
397
A
TRP
398
n
277
TRP
398
A
ASP
399
n
278
ASP
399
A
GLN
400
n
279
GLN
400
A
TRP
401
n
280
TRP
401
A
ARG
402
n
281
ARG
402
A
ALA
403
n
282
ALA
403
A
GLY
404
n
283
GLY
404
A
ASN
405
n
284
ASN
405
A
ALA
406
n
285
ALA
406
A
LYS
407
n
286
LYS
407
A
n
287
408
A
n
1
122
B
n
2
123
B
n
3
124
B
n
4
125
B
n
5
126
B
n
6
127
B
n
7
128
B
n
8
129
B
n
9
130
B
n
10
131
B
n
11
132
B
n
12
133
B
n
13
134
B
n
14
135
B
n
15
136
B
n
16
137
B
n
17
138
B
n
18
139
B
n
19
140
B
n
20
141
B
n
21
142
B
n
22
143
B
n
23
144
B
n
24
145
B
n
25
146
B
n
26
147
B
n
27
148
B
n
28
149
B
HIS
150
n
29
HIS
150
B
LEU
151
n
30
LEU
151
B
THR
152
n
31
THR
152
B
MET
153
n
32
MET
153
B
PRO
154
n
33
PRO
154
B
TYR
155
n
34
TYR
155
B
VAL
156
n
35
VAL
156
B
MET
157
n
36
MET
157
B
PRO
158
n
37
PRO
158
B
GLY
159
n
38
GLY
159
B
ASP
160
n
39
ASP
160
B
GLY
161
n
40
GLY
161
B
GLU
162
n
41
GLU
162
B
VAL
163
n
42
VAL
163
B
VAL
164
n
43
VAL
164
B
GLY
165
n
44
GLY
165
B
VAL
166
n
45
VAL
166
B
GLY
167
n
46
GLY
167
B
GLU
168
n
47
GLU
168
B
PRO
169
n
48
PRO
169
B
VAL
170
n
49
VAL
170
B
ALA
171
n
50
ALA
171
B
ILE
172
n
51
ILE
172
B
ARG
173
n
52
ARG
173
B
PHE
174
n
53
PHE
174
B
ASP
175
n
54
ASP
175
B
GLU
176
n
55
GLU
176
B
ASN
177
n
56
ASN
177
B
ILE
178
n
57
ILE
178
B
ALA
179
n
58
ALA
179
B
ASP
180
n
59
ASP
180
B
ARG
181
n
60
ARG
181
B
GLY
182
n
61
GLY
182
B
ALA
183
n
62
ALA
183
B
ALA
184
n
63
ALA
184
B
GLU
185
n
64
GLU
185
B
LYS
186
n
65
LYS
186
B
ALA
187
n
66
ALA
187
B
ILE
188
n
67
ILE
188
B
LYS
189
n
68
LYS
189
B
ILE
190
n
69
ILE
190
B
THR
191
n
70
THR
191
B
THR
192
n
71
THR
192
B
ASN
193
n
72
ASN
193
B
PRO
194
n
73
PRO
194
B
PRO
195
n
74
PRO
195
B
VAL
196
n
75
VAL
196
B
GLU
197
n
76
GLU
197
B
GLY
198
n
77
GLY
198
B
ALA
199
n
78
ALA
199
B
PHE
200
n
79
PHE
200
B
TYR
201
n
80
TYR
201
B
TRP
202
n
81
TRP
202
B
LEU
203
n
82
LEU
203
B
ASN
204
n
83
ASN
204
B
ASN
205
n
84
ASN
205
B
ARG
206
n
85
ARG
206
B
GLU
207
n
86
GLU
207
B
VAL
208
n
87
VAL
208
B
ARG
209
n
88
ARG
209
B
TRP
210
n
89
TRP
210
B
ARG
211
n
90
ARG
211
B
PRO
212
n
91
PRO
212
B
GLU
213
n
92
GLU
213
B
HIS
214
n
93
HIS
214
B
PHE
215
n
94
PHE
215
B
TRP
216
n
95
TRP
216
B
LYS
217
n
96
LYS
217
B
PRO
218
n
97
PRO
218
B
GLY
219
n
98
GLY
219
B
THR
220
n
99
THR
220
B
ALA
221
n
100
ALA
221
B
VAL
222
n
101
VAL
222
B
ASP
223
n
102
ASP
223
B
VAL
224
n
103
VAL
224
B
ALA
225
n
104
ALA
225
B
VAL
226
n
105
VAL
226
B
ASN
227
n
106
ASN
227
B
THR
228
n
107
THR
228
B
TYR
229
n
108
TYR
229
B
GLY
230
n
109
GLY
230
B
VAL
231
n
110
VAL
231
B
ASP
232
n
111
ASP
232
B
LEU
233
n
112
LEU
233
B
GLY
234
n
113
GLY
234
B
GLU
235
n
114
GLU
235
B
GLY
236
n
115
GLY
236
B
MET
237
n
116
MET
237
B
PHE
238
n
117
PHE
238
B
GLY
239
n
118
GLY
239
B
GLU
240
n
119
GLU
240
B
ASP
241
n
120
ASP
241
B
ASN
242
n
121
ASN
242
B
VAL
243
n
122
VAL
243
B
GLN
244
n
123
GLN
244
B
THR
245
n
124
THR
245
B
HIS
246
n
125
HIS
246
B
PHE
247
n
126
PHE
247
B
THR
248
n
127
THR
248
B
ILE
249
n
128
ILE
249
B
GLY
250
n
129
GLY
250
B
ASP
251
n
130
ASP
251
B
GLU
252
n
131
GLU
252
B
VAL
253
n
132
VAL
253
B
ILE
254
n
133
ILE
254
B
ALA
255
n
134
ALA
255
B
THR
256
n
135
THR
256
B
ALA
257
n
136
ALA
257
B
ASP
258
n
137
ASP
258
B
ASP
259
n
138
ASP
259
B
ASN
260
n
139
ASN
260
B
THR
261
n
140
THR
261
B
LYS
262
n
141
LYS
262
B
ILE
263
n
142
ILE
263
B
LEU
264
n
143
LEU
264
B
THR
265
n
144
THR
265
B
VAL
266
n
145
VAL
266
B
ARG
267
n
146
ARG
267
B
VAL
268
n
147
VAL
268
B
ASN
269
n
148
ASN
269
B
GLY
270
n
149
GLY
270
B
GLU
271
n
150
GLU
271
B
VAL
272
n
151
VAL
272
B
VAL
273
n
152
VAL
273
B
LYS
274
n
153
LYS
274
B
SER
275
n
154
SER
275
B
MET
276
n
155
MET
276
B
PRO
277
n
156
PRO
277
B
THR
278
n
157
THR
278
B
SER
279
n
158
SER
279
B
MET
280
n
159
MET
280
B
GLY
281
n
160
GLY
281
B
LYS
282
n
161
LYS
282
B
ASP
283
n
162
ASP
283
B
SER
284
n
163
SER
284
B
THR
285
n
164
THR
285
B
PRO
286
n
165
PRO
286
B
THR
287
n
166
THR
287
B
ALA
288
n
167
ALA
288
B
ASN
289
n
168
ASN
289
B
GLY
290
n
169
GLY
290
B
ILE
291
n
170
ILE
291
B
TYR
292
n
171
TYR
292
B
ILE
293
n
172
ILE
293
B
VAL
294
n
173
VAL
294
B
GLY
295
n
174
GLY
295
B
SER
296
n
175
SER
296
B
ARG
297
n
176
ARG
297
B
TYR
298
n
177
TYR
298
B
LYS
299
n
178
LYS
299
B
HIS
300
n
179
HIS
300
B
ILE
301
n
180
ILE
301
B
ILE
302
n
181
ILE
302
B
MET
303
n
182
MET
303
B
ASP
304
n
183
ASP
304
B
SER
305
n
184
SER
305
B
SER
306
n
185
SER
306
B
THR
307
n
186
THR
307
B
TYR
308
n
187
TYR
308
B
GLY
309
n
188
GLY
309
B
VAL
310
n
189
VAL
310
B
PRO
311
n
190
PRO
311
B
VAL
312
n
191
VAL
312
B
ASN
313
n
192
ASN
313
B
SER
314
n
193
SER
314
B
PRO
315
n
194
PRO
315
B
ASN
316
n
195
ASN
316
B
GLY
317
n
196
GLY
317
B
TYR
318
n
197
TYR
318
B
ARG
319
n
198
ARG
319
B
THR
320
n
199
THR
320
B
ASP
321
n
200
ASP
321
B
VAL
322
n
201
VAL
322
B
ASP
323
n
202
ASP
323
B
TRP
324
n
203
TRP
324
B
ALA
325
n
204
ALA
325
B
THR
326
n
205
THR
326
B
GLN
327
n
206
GLN
327
B
ILE
328
n
207
ILE
328
B
SER
329
n
208
SER
329
B
TYR
330
n
209
TYR
330
B
SER
331
n
210
SER
331
B
GLY
332
n
211
GLY
332
B
VAL
333
n
212
VAL
333
B
PHE
334
n
213
PHE
334
B
VAL
335
n
214
VAL
335
B
HIS
336
n
215
HIS
336
B
SER
337
n
216
SER
337
B
ALA
338
n
217
ALA
338
B
PRO
339
n
218
PRO
339
B
TRP
340
n
219
TRP
340
B
SER
341
n
220
SER
341
B
VAL
342
n
221
VAL
342
B
GLY
343
n
222
GLY
343
B
ALA
344
n
223
ALA
344
B
GLN
345
n
224
GLN
345
B
GLY
346
n
225
GLY
346
B
HIS
347
n
226
HIS
347
B
THR
348
n
227
THR
348
B
ASN
349
n
228
ASN
349
B
THR
350
n
229
THR
350
B
SER
351
n
230
SER
351
B
HIS
352
n
231
HIS
352
B
GLY
353
n
232
GLY
353
B
CSO
354
n
233
CSO
354
B
LEU
355
n
234
LEU
355
B
ASN
356
n
235
ASN
356
B
VAL
357
n
236
VAL
357
B
SER
358
n
237
SER
358
B
PRO
359
n
238
PRO
359
B
SER
360
n
239
SER
360
B
ASN
361
n
240
ASN
361
B
ALA
362
n
241
ALA
362
B
GLN
363
n
242
GLN
363
B
TRP
364
n
243
TRP
364
B
PHE
365
n
244
PHE
365
B
TYR
366
n
245
TYR
366
B
ASP
367
n
246
ASP
367
B
HIS
368
n
247
HIS
368
B
VAL
369
n
248
VAL
369
B
LYS
370
n
249
LYS
370
B
ARG
371
n
250
ARG
371
B
GLY
372
n
251
GLY
372
B
ASP
373
n
252
ASP
373
B
ILE
374
n
253
ILE
374
B
VAL
375
n
254
VAL
375
B
GLU
376
n
255
GLU
376
B
VAL
377
n
256
VAL
377
B
VAL
378
n
257
VAL
378
B
ASN
379
n
258
ASN
379
B
THR
380
n
259
THR
380
B
VAL
381
n
260
VAL
381
B
GLY
382
n
261
GLY
382
B
GLY
383
n
262
GLY
383
B
THR
384
n
263
THR
384
B
LEU
385
n
264
LEU
385
B
PRO
386
n
265
PRO
386
B
GLY
387
n
266
GLY
387
B
ILE
388
n
267
ILE
388
B
ASP
389
n
268
ASP
389
B
GLY
390
n
269
GLY
390
B
LEU
391
n
270
LEU
391
B
GLY
392
n
271
GLY
392
B
ASP
393
n
272
ASP
393
B
TRP
394
n
273
TRP
394
B
ASN
395
n
274
ASN
395
B
ILE
396
n
275
ILE
396
B
PRO
397
n
276
PRO
397
B
TRP
398
n
277
TRP
398
B
ASP
399
n
278
ASP
399
B
GLN
400
n
279
GLN
400
B
TRP
401
n
280
TRP
401
B
ARG
402
n
281
ARG
402
B
ALA
403
n
282
ALA
403
B
GLY
404
n
283
GLY
404
B
ASN
405
n
284
ASN
405
B
ALA
406
n
285
ALA
406
B
LYS
407
n
286
LYS
407
B
n
287
408
B
author_defined_assembly
1
monomeric
author_defined_assembly
1
monomeric
software_defined_assembly
PISA
2
dimeric
1860
-7
22520
A
CSO
354
S-HYDROXYCYSTEINE
A
CSO
233
CYS
B
CSO
354
S-HYDROXYCYSTEINE
B
CSO
233
CYS
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
MET
157
A
N
MET
36
A
O
ALA
171
A
O
ALA
50
A
N
VAL
170
A
N
VAL
49
A
O
TRP
210
A
O
TRP
89
A
O
ARG
209
A
O
ARG
88
A
N
TYR
201
A
N
TYR
80
A
N
VAL
164
A
N
VAL
43
A
O
THR
248
A
O
THR
127
A
O
VAL
243
A
O
VAL
122
A
N
VAL
226
A
N
VAL
105
A
O
ALA
225
A
O
ALA
104
A
N
LYS
189
A
N
LYS
68
A
O
MET
276
A
O
MET
155
A
N
LEU
264
A
N
LEU
143
A
O
THR
265
A
O
THR
144
A
N
THR
256
A
N
THR
135
A
N
ALA
255
A
N
ALA
134
A
O
ILE
374
A
O
ILE
253
A
O
VAL
375
A
O
VAL
254
A
N
TYR
292
A
N
TYR
171
A
N
ILE
301
A
N
ILE
180
A
O
VAL
322
A
O
VAL
201
A
N
THR
326
A
N
THR
205
A
O
VAL
335
A
O
VAL
214
A
N
PHE
334
A
N
PHE
213
A
O
LEU
355
A
O
LEU
234
B
N
THR
152
B
N
THR
31
B
O
PHE
238
B
O
PHE
117
B
N
MET
157
B
N
MET
36
B
O
ALA
171
B
O
ALA
50
B
N
ILE
172
B
N
ILE
51
B
O
VAL
208
B
O
VAL
87
B
O
ARG
209
B
O
ARG
88
B
N
TYR
201
B
N
TYR
80
B
N
VAL
164
B
N
VAL
43
B
O
THR
248
B
O
THR
127
B
O
VAL
243
B
O
VAL
122
B
N
VAL
226
B
N
VAL
105
B
O
ALA
225
B
O
ALA
104
B
N
LYS
189
B
N
LYS
68
B
O
MET
276
B
O
MET
155
B
N
LEU
264
B
N
LEU
143
B
O
THR
265
B
O
THR
144
B
N
THR
256
B
N
THR
135
B
N
ALA
255
B
N
ALA
134
B
O
GLU
376
B
O
GLU
255
B
O
VAL
375
B
O
VAL
254
B
N
TYR
292
B
N
TYR
171
B
N
ILE
301
B
N
ILE
180
B
O
VAL
322
B
O
VAL
201
B
N
THR
326
B
N
THR
205
B
O
VAL
335
B
O
VAL
214
B
N
PHE
334
B
N
PHE
213
B
O
LEU
355
B
O
LEU
234
1
A
CG
ARG
123
A
CG
ARG
2
1
Y
1
A
CD
ARG
123
A
CD
ARG
2
1
Y
1
A
NE
ARG
123
A
NE
ARG
2
1
Y
1
A
CZ
ARG
123
A
CZ
ARG
2
1
Y
1
A
NH1
ARG
123
A
NH1
ARG
2
1
Y
1
A
NH2
ARG
123
A
NH2
ARG
2
1
Y
1
A
ARG
122
A
ARG
1
1
Y
1
A
LEU
131
A
LEU
10
1
Y
1
A
GLY
132
A
GLY
11
1
Y
1
A
LEU
133
A
LEU
12
1
Y
1
A
GLY
134
A
GLY
13
1
Y
1
A
GLY
135
A
GLY
14
1
Y
1
A
ALA
136
A
ALA
15
1
Y
1
A
ALA
137
A
ALA
16
1
Y
1
A
THR
138
A
THR
17
1
Y
1
A
ARG
139
A
ARG
18
1
Y
1
A
GLN
140
A
GLN
19
1
Y
1
A
LEU
141
A
LEU
20
1
Y
1
A
THR
142
A
THR
21
1
Y
1
A
PHE
143
A
PHE
22
1
Y
1
A
GLN
144
A
GLN
23
1
Y
1
A
THR
145
A
THR
24
1
Y
1
A
SER
146
A
SER
25
1
Y
1
A
SER
147
A
SER
26
1
Y
1
A
PRO
148
A
PRO
27
1
Y
1
A
ALA
149
A
ALA
28
1
Y
1
A
ALA
408
A
ALA
287
1
Y
1
B
ARG
122
B
ARG
1
1
Y
1
B
ARG
123
B
ARG
2
1
Y
1
B
TYR
124
B
TYR
3
1
Y
1
B
THR
125
B
THR
4
1
Y
1
B
LEU
126
B
LEU
5
1
Y
1
B
ASN
127
B
ASN
6
1
Y
1
B
ALA
128
B
ALA
7
1
Y
1
B
THR
129
B
THR
8
1
Y
1
B
ALA
130
B
ALA
9
1
Y
1
B
LEU
131
B
LEU
10
1
Y
1
B
GLY
132
B
GLY
11
1
Y
1
B
LEU
133
B
LEU
12
1
Y
1
B
GLY
134
B
GLY
13
1
Y
1
B
GLY
135
B
GLY
14
1
Y
1
B
ALA
136
B
ALA
15
1
Y
1
B
ALA
137
B
ALA
16
1
Y
1
B
THR
138
B
THR
17
1
Y
1
B
ARG
139
B
ARG
18
1
Y
1
B
GLN
140
B
GLN
19
1
Y
1
B
LEU
141
B
LEU
20
1
Y
1
B
THR
142
B
THR
21
1
Y
1
B
PHE
143
B
PHE
22
1
Y
1
B
GLN
144
B
GLN
23
1
Y
1
B
THR
145
B
THR
24
1
Y
1
B
SER
146
B
SER
25
1
Y
1
B
SER
147
B
SER
26
1
Y
1
B
PRO
148
B
PRO
27
1
Y
1
B
ALA
149
B
ALA
28
1
Y
1
B
ALA
408
B
ALA
287
1
Y
1
-5.43
0.90
118.30
112.87
A
A
A
CB
CG
OD2
ASP
ASP
ASP
258
258
258
N
1
A
VAL
166
-58.77
-5.62
1
A
ASP
180
-108.04
77.38
1
A
ASN
204
-163.39
-161.70
1
A
VAL
272
-56.00
107.21
1
A
TRP
394
-69.82
0.46
1
A
ASP
399
135.22
-46.05
1
A
ASP
399
138.41
-51.31
1
A
ARG
402
-28.97
-60.82
1
A
ASN
405
-144.36
43.67
1
B
ASN
227
-100.36
78.56
1
B
GLU
235
72.41
34.01
1
B
THR
285
-153.99
65.23
1
B
ASN
405
-156.78
52.55
96.150
21.8225
2.000
2.1800
0.0000
0.0000
-0.8500
0.0000
-1.3300
0.9280
0.8610
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS; U VALUES: REFINED INDIVIDUALLY
0.2582
0.1867
0.1904
2.8000
19.8400
1127
22139
5.1000
99.8300
1.000
0.210
11.3390
0.2280
RANDOM
1
THROUGHOUT
0.000
MOLECULAR REPLACEMENT
0.3310
0.8000
0.8000
1.4000
MAXIMUM LIKELIHOOD
MASK
2.8000
19.8400
154
4197
14
0
4029
0.017
0.021
4202
1.730
1.917
5749
10.150
5.074
539
33.962
24.308
195
18.267
15.000
610
20.190
15.000
22
0.112
0.200
621
0.008
0.021
3296
0.729
1.500
2613
1.443
2.000
4242
2.333
3.000
1589
4.010
4.500
1501
0.4140
0.2870
2.8720
85
1487
1572
20
98.4300
2.800
20.000
3U1P
22155
0.152
0.844
1
4.500
7.200
100.000
0.555
2.800
2.850
1094
0.709
1
6.200
99.500
0.458
2.850
2.900
1101
0.740
1
6.600
99.700
0.397
2.900
2.960
1083
0.737
1
6.800
100.000
0.346
2.960
3.020
1074
0.702
1
7.200
100.000
0.305
3.020
3.080
1127
0.758
1
7.200
100.000
0.263
3.080
3.150
1079
0.739
1
7.300
100.000
0.241
3.150
3.230
1084
0.782
1
7.400
100.000
0.210
3.230
3.320
1103
0.739
1
7.400
100.000
0.192
3.320
3.410
1097
0.791
1
7.400
100.000
0.186
3.410
3.520
1095
0.877
1
7.400
100.000
0.149
3.520
3.650
1103
0.911
1
7.400
100.000
0.138
3.650
3.790
1107
1.043
1
7.400
100.000
0.131
3.790
3.970
1109
0.862
1
7.400
100.000
0.125
3.970
4.170
1103
0.908
1
7.400
100.000
0.103
4.170
4.430
1102
1.279
1
7.400
100.000
0.097
4.430
4.770
1130
0.994
1
7.400
100.000
0.093
4.770
5.240
1118
0.759
1
7.400
100.000
0.101
5.240
5.980
1108
0.752
1
7.300
100.000
0.104
5.980
7.470
1152
0.766
1
7.200
100.000
0.059
7.470
20.000
1186
0.965
1
6.900
100.000
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
program
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
5.5.0072
data extraction
PDB
deposit@deposit.rcsb.org
June 10, 2010
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.10
phasing
SHARP
Mycobacteria Tuberculosis LD-transpeptidase type 2
Crystal Structure of M. tuberculosis LD-transpeptidase type 2 with Modified Catalytic Cysteine (C354)
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
A
ASP
180
A
ASP
59
HELX_P
A
ALA
187
A
ALA
66
1
1
8
A
SER
306
A
SER
185
HELX_P
A
GLY
309
A
GLY
188
5
2
4
A
PRO
339
A
PRO
218
HELX_P
A
VAL
342
A
VAL
221
5
3
4
A
SER
358
A
SER
237
HELX_P
A
VAL
369
A
VAL
248
1
4
12
A
GLY
392
A
GLY
271
HELX_P
A
ILE
396
A
ILE
275
5
5
5
A
ASP
399
A
ASP
278
HELX_P
A
GLY
404
A
GLY
283
1
6
6
B
ASP
180
B
ASP
59
HELX_P
B
ALA
187
B
ALA
66
1
7
8
B
SER
306
B
SER
185
HELX_P
B
GLY
309
B
GLY
188
5
8
4
B
PRO
339
B
PRO
218
HELX_P
B
GLN
345
B
GLN
224
5
9
7
B
SER
358
B
SER
237
HELX_P
B
VAL
369
B
VAL
248
1
10
12
B
GLY
392
B
GLY
271
HELX_P
B
ILE
396
B
ILE
275
5
11
5
B
PRO
397
B
PRO
276
HELX_P
B
GLY
404
B
GLY
283
1
12
8
covale
1.348
A
GLY
353
A
C
GLY
232
1_555
A
CSO
354
A
N
CSO
233
1_555
covale
1.335
A
CSO
354
A
C
CSO
233
1_555
A
LEU
355
A
N
LEU
234
1_555
covale
1.344
B
GLY
353
B
C
GLY
232
1_555
B
CSO
354
B
N
CSO
233
1_555
covale
1.324
B
CSO
354
B
C
CSO
233
1_555
B
LEU
355
B
N
LEU
234
1_555
PEPTIDOGLYCAN BINDING PROTEIN
protein-peptidoglycan complex, PEPTIDOGLYCAN BINDING PROTEIN
A
MET
157
A
MET
36
1
A
PRO
158
A
PRO
37
-6.47
A
ASN
193
A
ASN
72
1
A
PRO
194
A
PRO
73
1.01
B
MET
157
B
MET
36
1
B
PRO
158
B
PRO
37
4.28
B
MET
157
B
MET
36
1
B
PRO
158
B
PRO
37
3.26
B
ASN
193
B
ASN
72
1
B
PRO
194
B
PRO
73
3.73
O53223_MYCTU
UNP
1
122
O53223
RRYTLNATALGLGGAATRQLTFQTSSPAHLTMPYVMPGDGEVVGVGEPVAIRFDENIADRGAAEKAIKITTNPPVEGAFY
WLNNREVRWRPEHFWKPGTAVDVAVNTYGVDLGEGMFGEDNVQTHFTIGDEVIATADDNTKILTVRVNGEVVKSMPTSMG
KDSTPTANGIYIVGSRYKHIIMDSSTYGVPVNSPNGYRTDVDWATQISYSGVFVHSAPWSVGAQGHTNTSHGCLNVSPSN
AQWFYDHVKRGDIVEVVNTVGGTLPGIDGLGDWNIPWDQWRAGNAKA
122
408
3U1P
122
408
O53223
A
1
1
287
122
408
3U1P
122
408
O53223
B
1
1
287
4
4
5
4
2
4
4
5
4
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
A
PRO
154
A
PRO
33
A
MET
157
A
MET
36
A
VAL
170
A
VAL
49
A
PHE
174
A
PHE
53
A
GLU
207
A
GLU
86
A
PRO
212
A
PRO
91
A
GLY
198
A
GLY
77
A
TRP
202
A
TRP
81
A
VAL
163
A
VAL
42
A
VAL
164
A
VAL
43
A
VAL
243
A
VAL
122
A
ILE
249
A
ILE
128
A
ALA
221
A
ALA
100
A
VAL
226
A
VAL
105
A
ILE
188
A
ILE
67
A
ASN
193
A
ASN
72
A
GLU
271
A
GLU
150
A
PRO
277
A
PRO
156
A
ILE
263
A
ILE
142
A
VAL
268
A
VAL
147
A
VAL
253
A
VAL
132
A
ASP
258
A
ASP
137
A
ILE
374
A
ILE
253
A
VAL
378
A
VAL
257
A
GLY
290
A
GLY
169
A
ILE
293
A
ILE
172
A
ARG
297
A
ARG
176
A
ASP
304
A
ASP
183
A
ARG
319
A
ARG
198
A
GLN
327
A
GLN
206
A
PHE
334
A
PHE
213
A
SER
337
A
SER
216
A
LEU
355
A
LEU
234
A
VAL
357
A
VAL
236
B
LEU
151
B
LEU
30
B
THR
152
B
THR
31
B
PHE
238
B
PHE
117
B
GLY
239
B
GLY
118
B
PRO
154
B
PRO
33
B
MET
157
B
MET
36
B
VAL
170
B
VAL
49
B
PHE
174
B
PHE
53
B
GLU
207
B
GLU
86
B
PRO
212
B
PRO
91
B
GLY
198
B
GLY
77
B
ASN
204
B
ASN
83
B
VAL
163
B
VAL
42
B
VAL
164
B
VAL
43
B
ASN
242
B
ASN
121
B
ILE
249
B
ILE
128
B
ALA
221
B
ALA
100
B
ASN
227
B
ASN
106
B
ILE
188
B
ILE
67
B
ASN
193
B
ASN
72
B
GLU
271
B
GLU
150
B
PRO
277
B
PRO
156
B
ILE
263
B
ILE
142
B
VAL
268
B
VAL
147
B
VAL
253
B
VAL
132
B
ASP
258
B
ASP
137
B
ILE
374
B
ILE
253
B
VAL
378
B
VAL
257
B
GLY
290
B
GLY
169
B
ILE
293
B
ILE
172
B
ARG
297
B
ARG
176
B
ASP
304
B
ASP
183
B
ARG
319
B
ARG
198
B
GLN
327
B
GLN
206
B
PHE
334
B
PHE
213
B
SER
337
B
SER
216
B
LEU
355
B
LEU
234
B
VAL
357
B
VAL
236
BINDING SITE FOR RESIDUE PEG A 501
Software
2
BINDING SITE FOR RESIDUE PEG B 501
Software
5
A
ASP
323
A
ASP
202
2
1_555
A
HOH
626
E
HOH
2
7_455
B
ASN
242
B
ASN
121
5
1_555
B
GLN
244
B
GLN
123
5
1_555
B
SER
306
B
SER
185
5
6_545
B
HOH
647
F
HOH
5
1_555
B
HOH
665
F
HOH
5
1_555
24
I 21 21 21