0.008422
0.000000
0.000000
0.000000
0.008422
0.000000
0.000000
0.000000
0.009883
0.00000
0.00000
0.00000
Julien, J.-P.
Diwanji, D.
Burton, D.R.
Wilson, I.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
118.730
118.730
101.184
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C9 H11 N O6 S
261.252
n
O-SULFO-L-TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
C
N
138
N
O
N
139
N
C
N
140
N
O
N
141
N
C
N
142
N
O
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
N
N
152
S
C
N
153
N
C
N
154
N
O
N
155
N
C
Y
156
N
C
Y
157
N
N
Y
158
N
C
Y
159
N
C
Y
160
N
N
N
161
N
O
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
O
N
173
N
H
N
174
N
H
N
175
N
N
N
176
S
C
N
177
N
C
N
178
N
O
N
179
S
C
N
180
N
C
N
181
N
C
N
182
N
C
N
183
N
O
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
N
N
198
S
C
N
199
N
C
N
200
N
O
N
201
N
C
N
202
N
C
N
203
N
C
N
204
N
C
N
205
N
O
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
N
N
220
S
C
N
221
N
C
N
222
N
O
N
223
N
C
N
224
N
C
N
225
N
C
N
226
N
C
N
227
N
N
N
228
N
O
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
N
N
245
S
C
N
246
N
C
N
247
N
O
N
248
N
C
N
249
N
C
N
250
N
S
N
251
N
C
N
252
N
O
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
N
N
265
S
C
N
266
N
C
N
267
N
O
N
268
N
C
Y
269
N
C
Y
270
N
C
Y
271
N
C
Y
272
N
C
Y
273
N
C
Y
274
N
C
N
275
N
O
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
C
N
293
N
C
N
294
N
O
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
N
C
N
309
N
O
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
S
N
319
N
O
N
320
N
O
N
321
N
O
N
322
N
O
N
323
N
N
N
324
S
C
N
325
N
C
N
326
N
O
N
327
R
C
N
328
N
O
N
329
N
C
N
330
N
O
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
N
N
341
S
C
N
342
N
C
N
343
N
O
N
344
N
C
Y
345
N
C
Y
346
N
C
Y
347
N
C
Y
348
N
N
Y
349
N
C
Y
350
N
C
Y
351
N
C
Y
352
N
C
Y
353
N
C
N
354
N
O
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
N
N
368
S
C
N
369
N
C
N
370
N
O
N
371
N
C
Y
372
N
C
Y
373
N
C
Y
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
C
N
378
N
O
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
N
N
392
S
C
N
393
N
C
Y
394
N
C
Y
395
N
C
Y
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
C
N
400
N
O
N
401
N
S
N
402
N
O
N
403
N
O
N
404
N
O
N
405
N
C
N
406
N
O
N
407
N
O
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
N
N
420
S
C
N
421
N
C
N
422
N
O
N
423
N
C
N
424
N
C
N
425
N
C
N
426
N
O
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
Y
153
N
sing
Y
154
N
doub
Y
155
N
doub
N
156
N
sing
Y
157
N
sing
N
158
N
sing
Y
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
doub
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
doub
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
doub
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
doub
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
Y
261
N
doub
Y
262
N
sing
Y
263
N
sing
N
264
N
sing
Y
265
N
doub
N
266
N
sing
Y
267
N
doub
N
268
N
sing
Y
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
doub
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
doub
N
304
N
doub
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
doub
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
doub
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
Y
334
N
doub
Y
335
N
sing
Y
336
N
sing
N
337
N
sing
Y
338
N
doub
Y
339
N
sing
Y
340
N
sing
N
341
N
sing
Y
342
N
sing
Y
343
N
doub
N
344
N
sing
Y
345
N
doub
N
346
N
sing
Y
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
doub
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
Y
362
N
doub
Y
363
N
sing
Y
364
N
sing
N
365
N
sing
Y
366
N
doub
N
367
N
sing
Y
368
N
doub
N
369
N
sing
Y
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
Y
384
N
doub
Y
385
N
sing
Y
386
N
sing
N
387
N
sing
Y
388
N
doub
N
389
N
sing
Y
390
N
doub
N
391
N
sing
Y
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
doub
N
397
N
doub
N
398
N
sing
N
399
N
sing
N
400
N
doub
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
doub
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
UK
Nature
NATUAS
0006
0028-0836
480
336
343
10.1038/nature10696
22113616
Structure of HIV-1 gp120 V1/V2 domain with broadly neutralizing antibody PG9.
2011
10.2210/pdb3u1s/pdb
pdb_00003u1s
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2011-08-04
MARMOSAIC 300 mm CCD
Double crystal cryo-cooled
SINGLE WAVELENGTH
M
x-ray
1
1.03322
1.0
23-ID-D
APS
1.03322
SYNCHROTRON
APS BEAMLINE 23-ID-D
26050.344
Fab PGT145 Light chain
fragment antigen binding
1
man
polymer
28953.285
Fab PGT145 Heavy chain
fragment antigen binding
1
man
polymer
96.063
SULFATE ION
6
syn
non-polymer
92.094
GLYCEROL
1
syn
non-polymer
18.015
water
313
nat
water
no
no
MRLPAQLLGLLMLWVSGSGAEVVITQSPLFLPVTPGEAASLSCKCSHSLQHSTGANYLAWYLQRPGQTPRLLIHLATHRA
SGVPDRFSGSGSGTDFTLKISRVESDDVGTYYCMQGLHSPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCL
LNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
MRLPAQLLGLLMLWVSGSGAEVVITQSPLFLPVTPGEAASLSCKCSHSLQHSTGANYLAWYLQRPGQTPRLLIHLATHRA
SGVPDRFSGSGSGTDFTLKISRVESDDVGTYYCMQGLHSPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCL
LNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
L
polypeptide(L)
no
yes
QASTMDWIWRILFLVAAATSAHSQVQLVQSGAEVKKPGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDK
TGLAQKFQGRVTITRDSGASTVYMELRGLTADDTAIYYCLTGSKHRLRDYFL(TYS)NE(TYS)GPNYEEWGDYLATLDV
WGHGTAVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVV
TVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
QASTMDWIWRILFLVAAATSAHSQVQLVQSGAEVKKPGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDK
TGLAQKFQGRVTITRDSGASTVYMELRGLTADDTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVT
VSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLG
TQTYICNVNHKPSNTKVDKKVEPKSCD
H
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
human
sample
9606
Homo sapiens
HEK 293T
9606
Homo sapiens
human
human
sample
9606
Homo sapiens
HEK 293T
9606
Homo sapiens
1
3.24
62.05
VAPOR DIFFUSION, SITTING DROP
7.5
0.1 M HEPES, pH 7.5, 2 M ammonium sulfate and 20% PEG 400, VAPOR DIFFUSION, SITTING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_conn
struct_site
chem_comp_atom
chem_comp_bond
repository
Initial release
Database references
Data collection
Database references
Derived calculations
Refinement description
Data collection
1
0
2011-12-07
1
1
2011-12-21
1
2
2023-09-13
1
3
2023-12-06
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_chem_comp_atom.atom_id
_chem_comp_bond.atom_id_2
RCSB
Y
RCSB
2011-09-30
REL
REL
SO4
SULFATE ION
GOL
GLYCEROL
HOH
water
3MUG
PDB
experimental model
SO4
215
3
SO4
SO4
215
L
SO4
216
3
SO4
SO4
216
L
SO4
217
3
SO4
SO4
217
L
SO4
218
3
SO4
SO4
218
L
GOL
219
4
GOL
GOL
219
L
SO4
223
3
SO4
SO4
223
H
SO4
224
3
SO4
SO4
224
H
HOH
220
5
HOH
HOH
220
L
HOH
221
5
HOH
HOH
221
L
HOH
222
5
HOH
HOH
222
L
HOH
223
5
HOH
HOH
223
L
HOH
224
5
HOH
HOH
224
L
HOH
225
5
HOH
HOH
225
L
HOH
226
5
HOH
HOH
226
L
HOH
227
5
HOH
HOH
227
L
HOH
228
5
HOH
HOH
228
L
HOH
229
5
HOH
HOH
229
L
HOH
230
5
HOH
HOH
230
L
HOH
231
5
HOH
HOH
231
L
HOH
232
5
HOH
HOH
232
L
HOH
233
5
HOH
HOH
233
L
HOH
234
5
HOH
HOH
234
L
HOH
235
5
HOH
HOH
235
L
HOH
236
5
HOH
HOH
236
L
HOH
237
5
HOH
HOH
237
L
HOH
238
5
HOH
HOH
238
L
HOH
239
5
HOH
HOH
239
L
HOH
240
5
HOH
HOH
240
L
HOH
241
5
HOH
HOH
241
L
HOH
242
5
HOH
HOH
242
L
HOH
243
5
HOH
HOH
243
L
HOH
244
5
HOH
HOH
244
L
HOH
245
5
HOH
HOH
245
L
HOH
246
5
HOH
HOH
246
L
HOH
247
5
HOH
HOH
247
L
HOH
248
5
HOH
HOH
248
L
HOH
249
5
HOH
HOH
249
L
HOH
250
5
HOH
HOH
250
L
HOH
251
5
HOH
HOH
251
L
HOH
252
5
HOH
HOH
252
L
HOH
253
5
HOH
HOH
253
L
HOH
254
5
HOH
HOH
254
L
HOH
255
5
HOH
HOH
255
L
HOH
256
5
HOH
HOH
256
L
HOH
257
5
HOH
HOH
257
L
HOH
258
5
HOH
HOH
258
L
HOH
259
5
HOH
HOH
259
L
HOH
260
5
HOH
HOH
260
L
HOH
261
5
HOH
HOH
261
L
HOH
262
5
HOH
HOH
262
L
HOH
263
5
HOH
HOH
263
L
HOH
264
5
HOH
HOH
264
L
HOH
265
5
HOH
HOH
265
L
HOH
266
5
HOH
HOH
266
L
HOH
267
5
HOH
HOH
267
L
HOH
268
5
HOH
HOH
268
L
HOH
269
5
HOH
HOH
269
L
HOH
270
5
HOH
HOH
270
L
HOH
271
5
HOH
HOH
271
L
HOH
272
5
HOH
HOH
272
L
HOH
273
5
HOH
HOH
273
L
HOH
274
5
HOH
HOH
274
L
HOH
275
5
HOH
HOH
275
L
HOH
276
5
HOH
HOH
276
L
HOH
277
5
HOH
HOH
277
L
HOH
278
5
HOH
HOH
278
L
HOH
279
5
HOH
HOH
279
L
HOH
280
5
HOH
HOH
280
L
HOH
281
5
HOH
HOH
281
L
HOH
282
5
HOH
HOH
282
L
HOH
283
5
HOH
HOH
283
L
HOH
284
5
HOH
HOH
284
L
HOH
285
5
HOH
HOH
285
L
HOH
286
5
HOH
HOH
286
L
HOH
287
5
HOH
HOH
287
L
HOH
288
5
HOH
HOH
288
L
HOH
289
5
HOH
HOH
289
L
HOH
290
5
HOH
HOH
290
L
HOH
291
5
HOH
HOH
291
L
HOH
292
5
HOH
HOH
292
L
HOH
293
5
HOH
HOH
293
L
HOH
294
5
HOH
HOH
294
L
HOH
295
5
HOH
HOH
295
L
HOH
296
5
HOH
HOH
296
L
HOH
297
5
HOH
HOH
297
L
HOH
298
5
HOH
HOH
298
L
HOH
299
5
HOH
HOH
299
L
HOH
300
5
HOH
HOH
300
L
HOH
301
5
HOH
HOH
301
L
HOH
302
5
HOH
HOH
302
L
HOH
303
5
HOH
HOH
303
L
HOH
304
5
HOH
HOH
304
L
HOH
305
5
HOH
HOH
305
L
HOH
307
5
HOH
HOH
307
L
HOH
308
5
HOH
HOH
308
L
HOH
309
5
HOH
HOH
309
L
HOH
310
5
HOH
HOH
310
L
HOH
311
5
HOH
HOH
311
L
HOH
312
5
HOH
HOH
312
L
HOH
313
5
HOH
HOH
313
L
HOH
314
5
HOH
HOH
314
L
HOH
315
5
HOH
HOH
315
L
HOH
316
5
HOH
HOH
316
L
HOH
317
5
HOH
HOH
317
L
HOH
318
5
HOH
HOH
318
L
HOH
319
5
HOH
HOH
319
L
HOH
320
5
HOH
HOH
320
L
HOH
321
5
HOH
HOH
321
L
HOH
322
5
HOH
HOH
322
L
HOH
323
5
HOH
HOH
323
L
HOH
324
5
HOH
HOH
324
L
HOH
325
5
HOH
HOH
325
L
HOH
326
5
HOH
HOH
326
L
HOH
327
5
HOH
HOH
327
L
HOH
328
5
HOH
HOH
328
L
HOH
329
5
HOH
HOH
329
L
HOH
330
5
HOH
HOH
330
L
HOH
331
5
HOH
HOH
331
L
HOH
332
5
HOH
HOH
332
L
HOH
333
5
HOH
HOH
333
L
HOH
334
5
HOH
HOH
334
L
HOH
335
5
HOH
HOH
335
L
HOH
336
5
HOH
HOH
336
L
HOH
337
5
HOH
HOH
337
L
HOH
338
5
HOH
HOH
338
L
HOH
339
5
HOH
HOH
339
L
HOH
340
5
HOH
HOH
340
L
HOH
341
5
HOH
HOH
341
L
HOH
342
5
HOH
HOH
342
L
HOH
343
5
HOH
HOH
343
L
HOH
344
5
HOH
HOH
344
L
HOH
345
5
HOH
HOH
345
L
HOH
346
5
HOH
HOH
346
L
HOH
347
5
HOH
HOH
347
L
HOH
348
5
HOH
HOH
348
L
HOH
349
5
HOH
HOH
349
L
HOH
350
5
HOH
HOH
350
L
HOH
351
5
HOH
HOH
351
L
HOH
352
5
HOH
HOH
352
L
HOH
353
5
HOH
HOH
353
L
HOH
354
5
HOH
HOH
354
L
HOH
355
5
HOH
HOH
355
L
HOH
356
5
HOH
HOH
356
L
HOH
357
5
HOH
HOH
357
L
HOH
358
5
HOH
HOH
358
L
HOH
359
5
HOH
HOH
359
L
HOH
360
5
HOH
HOH
360
L
HOH
361
5
HOH
HOH
361
L
HOH
362
5
HOH
HOH
362
L
HOH
363
5
HOH
HOH
363
L
HOH
364
5
HOH
HOH
364
L
HOH
365
5
HOH
HOH
365
L
HOH
225
5
HOH
HOH
225
H
HOH
226
5
HOH
HOH
226
H
HOH
227
5
HOH
HOH
227
H
HOH
228
5
HOH
HOH
228
H
HOH
229
5
HOH
HOH
229
H
HOH
230
5
HOH
HOH
230
H
HOH
231
5
HOH
HOH
231
H
HOH
232
5
HOH
HOH
232
H
HOH
233
5
HOH
HOH
233
H
HOH
234
5
HOH
HOH
234
H
HOH
235
5
HOH
HOH
235
H
HOH
236
5
HOH
HOH
236
H
HOH
237
5
HOH
HOH
237
H
HOH
238
5
HOH
HOH
238
H
HOH
239
5
HOH
HOH
239
H
HOH
240
5
HOH
HOH
240
H
HOH
241
5
HOH
HOH
241
H
HOH
242
5
HOH
HOH
242
H
HOH
243
5
HOH
HOH
243
H
HOH
244
5
HOH
HOH
244
H
HOH
245
5
HOH
HOH
245
H
HOH
246
5
HOH
HOH
246
H
HOH
247
5
HOH
HOH
247
H
HOH
248
5
HOH
HOH
248
H
HOH
249
5
HOH
HOH
249
H
HOH
250
5
HOH
HOH
250
H
HOH
251
5
HOH
HOH
251
H
HOH
252
5
HOH
HOH
252
H
HOH
253
5
HOH
HOH
253
H
HOH
254
5
HOH
HOH
254
H
HOH
255
5
HOH
HOH
255
H
HOH
256
5
HOH
HOH
256
H
HOH
257
5
HOH
HOH
257
H
HOH
258
5
HOH
HOH
258
H
HOH
259
5
HOH
HOH
259
H
HOH
260
5
HOH
HOH
260
H
HOH
261
5
HOH
HOH
261
H
HOH
262
5
HOH
HOH
262
H
HOH
263
5
HOH
HOH
263
H
HOH
264
5
HOH
HOH
264
H
HOH
265
5
HOH
HOH
265
H
HOH
266
5
HOH
HOH
266
H
HOH
267
5
HOH
HOH
267
H
HOH
268
5
HOH
HOH
268
H
HOH
269
5
HOH
HOH
269
H
HOH
270
5
HOH
HOH
270
H
HOH
271
5
HOH
HOH
271
H
HOH
272
5
HOH
HOH
272
H
HOH
273
5
HOH
HOH
273
H
HOH
274
5
HOH
HOH
274
H
HOH
275
5
HOH
HOH
275
H
HOH
276
5
HOH
HOH
276
H
HOH
277
5
HOH
HOH
277
H
HOH
278
5
HOH
HOH
278
H
HOH
279
5
HOH
HOH
279
H
HOH
280
5
HOH
HOH
280
H
HOH
281
5
HOH
HOH
281
H
HOH
282
5
HOH
HOH
282
H
HOH
283
5
HOH
HOH
283
H
HOH
284
5
HOH
HOH
284
H
HOH
285
5
HOH
HOH
285
H
HOH
286
5
HOH
HOH
286
H
HOH
287
5
HOH
HOH
287
H
HOH
288
5
HOH
HOH
288
H
HOH
289
5
HOH
HOH
289
H
HOH
290
5
HOH
HOH
290
H
HOH
291
5
HOH
HOH
291
H
HOH
293
5
HOH
HOH
293
H
HOH
294
5
HOH
HOH
294
H
HOH
295
5
HOH
HOH
295
H
HOH
296
5
HOH
HOH
296
H
HOH
297
5
HOH
HOH
297
H
HOH
298
5
HOH
HOH
298
H
HOH
299
5
HOH
HOH
299
H
HOH
300
5
HOH
HOH
300
H
HOH
301
5
HOH
HOH
301
H
HOH
302
5
HOH
HOH
302
H
HOH
303
5
HOH
HOH
303
H
HOH
304
5
HOH
HOH
304
H
HOH
305
5
HOH
HOH
305
H
HOH
306
5
HOH
HOH
306
H
HOH
307
5
HOH
HOH
307
H
HOH
308
5
HOH
HOH
308
H
HOH
309
5
HOH
HOH
309
H
HOH
310
5
HOH
HOH
310
H
HOH
311
5
HOH
HOH
311
H
HOH
312
5
HOH
HOH
312
H
HOH
313
5
HOH
HOH
313
H
HOH
314
5
HOH
HOH
314
H
HOH
315
5
HOH
HOH
315
H
HOH
316
5
HOH
HOH
316
H
HOH
317
5
HOH
HOH
317
H
HOH
318
5
HOH
HOH
318
H
HOH
319
5
HOH
HOH
319
H
HOH
320
5
HOH
HOH
320
H
HOH
321
5
HOH
HOH
321
H
HOH
322
5
HOH
HOH
322
H
HOH
323
5
HOH
HOH
323
H
HOH
324
5
HOH
HOH
324
H
HOH
325
5
HOH
HOH
325
H
HOH
326
5
HOH
HOH
326
H
HOH
327
5
HOH
HOH
327
H
HOH
328
5
HOH
HOH
328
H
HOH
329
5
HOH
HOH
329
H
HOH
330
5
HOH
HOH
330
H
HOH
331
5
HOH
HOH
331
H
HOH
332
5
HOH
HOH
332
H
HOH
333
5
HOH
HOH
333
H
HOH
334
5
HOH
HOH
334
H
HOH
335
5
HOH
HOH
335
H
HOH
336
5
HOH
HOH
336
H
HOH
337
5
HOH
HOH
337
H
HOH
340
5
HOH
HOH
340
H
HOH
341
5
HOH
HOH
341
H
HOH
342
5
HOH
HOH
342
H
HOH
343
5
HOH
HOH
343
H
HOH
344
5
HOH
HOH
344
H
HOH
345
5
HOH
HOH
345
H
HOH
346
5
HOH
HOH
346
H
HOH
347
5
HOH
HOH
347
H
HOH
348
5
HOH
HOH
348
H
HOH
349
5
HOH
HOH
349
H
HOH
350
5
HOH
HOH
350
H
HOH
351
5
HOH
HOH
351
H
HOH
352
5
HOH
HOH
352
H
HOH
353
5
HOH
HOH
353
H
HOH
354
5
HOH
HOH
354
H
HOH
355
5
HOH
HOH
355
H
HOH
356
5
HOH
HOH
356
H
HOH
357
5
HOH
HOH
357
H
HOH
358
5
HOH
HOH
358
H
HOH
359
5
HOH
HOH
359
H
HOH
360
5
HOH
HOH
360
H
HOH
361
5
HOH
HOH
361
H
HOH
362
5
HOH
HOH
362
H
HOH
363
5
HOH
HOH
363
H
HOH
364
5
HOH
HOH
364
H
HOH
365
5
HOH
HOH
365
H
HOH
366
5
HOH
HOH
366
H
HOH
367
5
HOH
HOH
367
H
HOH
368
5
HOH
HOH
368
H
HOH
369
5
HOH
HOH
369
H
HOH
370
5
HOH
HOH
370
H
HOH
371
5
HOH
HOH
371
H
HOH
372
5
HOH
HOH
372
H
HOH
373
5
HOH
HOH
373
H
HOH
374
5
HOH
HOH
374
H
HOH
375
5
HOH
HOH
375
H
HOH
376
5
HOH
HOH
376
H
HOH
377
5
HOH
HOH
377
H
HOH
378
5
HOH
HOH
378
H
HOH
379
5
HOH
HOH
379
H
HOH
380
5
HOH
HOH
380
H
HOH
381
5
HOH
HOH
381
H
HOH
382
5
HOH
HOH
382
H
HOH
383
5
HOH
HOH
383
H
HOH
384
5
HOH
HOH
384
H
HOH
385
5
HOH
HOH
385
H
HOH
386
5
HOH
HOH
386
H
HOH
387
5
HOH
HOH
387
H
HOH
388
5
HOH
HOH
388
H
HOH
389
5
HOH
HOH
389
H
HOH
390
5
HOH
HOH
390
H
HOH
391
5
HOH
HOH
391
H
HOH
392
5
HOH
HOH
392
H
HOH
393
5
HOH
HOH
393
H
HOH
394
5
HOH
HOH
394
H
HOH
395
5
HOH
HOH
395
H
n
1
-19
L
n
2
-18
L
n
3
-17
L
n
4
-16
L
n
5
-15
L
n
6
-14
L
n
7
-13
L
n
8
-12
L
n
9
-11
L
n
10
-10
L
n
11
-9
L
n
12
-8
L
n
13
-7
L
n
14
-6
L
n
15
-5
L
n
16
-4
L
n
17
-3
L
n
18
-2
L
n
19
-1
L
n
20
0
L
n
21
1
L
VAL
2
n
22
VAL
2
L
VAL
3
n
23
VAL
3
L
ILE
4
n
24
ILE
4
L
THR
5
n
25
THR
5
L
GLN
6
n
26
GLN
6
L
SER
7
n
27
SER
7
L
PRO
8
n
28
PRO
8
L
LEU
9
n
29
LEU
9
L
PHE
10
n
30
PHE
10
L
LEU
11
n
31
LEU
11
L
PRO
12
n
32
PRO
12
L
VAL
13
n
33
VAL
13
L
THR
14
n
34
THR
14
L
PRO
15
n
35
PRO
15
L
GLY
16
n
36
GLY
16
L
GLU
17
n
37
GLU
17
L
ALA
18
n
38
ALA
18
L
ALA
19
n
39
ALA
19
L
SER
20
n
40
SER
20
L
LEU
21
n
41
LEU
21
L
SER
22
n
42
SER
22
L
CYS
23
n
43
CYS
23
L
LYS
24
n
44
LYS
24
L
CYS
25
n
45
CYS
25
L
SER
26
n
46
SER
26
L
HIS
27
n
47
HIS
27
L
SER
27
n
48
A
SER
27
L
LEU
27
n
49
B
LEU
27
L
GLN
27
n
50
C
GLN
27
L
HIS
27
n
51
D
HIS
27
L
SER
27
n
52
E
SER
27
L
THR
28
n
53
THR
28
L
GLY
29
n
54
GLY
29
L
ALA
30
n
55
ALA
30
L
ASN
31
n
56
ASN
31
L
TYR
32
n
57
TYR
32
L
LEU
33
n
58
LEU
33
L
ALA
34
n
59
ALA
34
L
TRP
35
n
60
TRP
35
L
TYR
36
n
61
TYR
36
L
LEU
37
n
62
LEU
37
L
GLN
38
n
63
GLN
38
L
ARG
39
n
64
ARG
39
L
PRO
40
n
65
PRO
40
L
GLY
41
n
66
GLY
41
L
GLN
42
n
67
GLN
42
L
THR
43
n
68
THR
43
L
PRO
44
n
69
PRO
44
L
ARG
45
n
70
ARG
45
L
LEU
46
n
71
LEU
46
L
LEU
47
n
72
LEU
47
L
ILE
48
n
73
ILE
48
L
HIS
49
n
74
HIS
49
L
LEU
50
n
75
LEU
50
L
ALA
51
n
76
ALA
51
L
THR
52
n
77
THR
52
L
HIS
53
n
78
HIS
53
L
ARG
54
n
79
ARG
54
L
ALA
55
n
80
ALA
55
L
SER
56
n
81
SER
56
L
GLY
57
n
82
GLY
57
L
VAL
58
n
83
VAL
58
L
PRO
59
n
84
PRO
59
L
ASP
60
n
85
ASP
60
L
ARG
61
n
86
ARG
61
L
PHE
62
n
87
PHE
62
L
SER
63
n
88
SER
63
L
GLY
64
n
89
GLY
64
L
SER
65
n
90
SER
65
L
GLY
66
n
91
GLY
66
L
SER
67
n
92
SER
67
L
GLY
68
n
93
GLY
68
L
THR
69
n
94
THR
69
L
ASP
70
n
95
ASP
70
L
PHE
71
n
96
PHE
71
L
THR
72
n
97
THR
72
L
LEU
73
n
98
LEU
73
L
LYS
74
n
99
LYS
74
L
ILE
75
n
100
ILE
75
L
SER
76
n
101
SER
76
L
ARG
77
n
102
ARG
77
L
VAL
78
n
103
VAL
78
L
GLU
79
n
104
GLU
79
L
SER
80
n
105
SER
80
L
ASP
81
n
106
ASP
81
L
ASP
82
n
107
ASP
82
L
VAL
83
n
108
VAL
83
L
GLY
84
n
109
GLY
84
L
THR
85
n
110
THR
85
L
TYR
86
n
111
TYR
86
L
TYR
87
n
112
TYR
87
L
CYS
88
n
113
CYS
88
L
MET
89
n
114
MET
89
L
GLN
90
n
115
GLN
90
L
GLY
91
n
116
GLY
91
L
LEU
92
n
117
LEU
92
L
HIS
93
n
118
HIS
93
L
SER
94
n
119
SER
94
L
PRO
95
n
120
PRO
95
L
TRP
96
n
121
TRP
96
L
THR
97
n
122
THR
97
L
PHE
98
n
123
PHE
98
L
GLY
99
n
124
GLY
99
L
GLN
100
n
125
GLN
100
L
GLY
101
n
126
GLY
101
L
THR
102
n
127
THR
102
L
LYS
103
n
128
LYS
103
L
VAL
104
n
129
VAL
104
L
GLU
105
n
130
GLU
105
L
ILE
106
n
131
ILE
106
L
LYS
107
n
132
LYS
107
L
ARG
108
n
133
ARG
108
L
THR
109
n
134
THR
109
L
VAL
110
n
135
VAL
110
L
ALA
111
n
136
ALA
111
L
ALA
112
n
137
ALA
112
L
PRO
113
n
138
PRO
113
L
SER
114
n
139
SER
114
L
VAL
115
n
140
VAL
115
L
PHE
116
n
141
PHE
116
L
ILE
117
n
142
ILE
117
L
PHE
118
n
143
PHE
118
L
PRO
119
n
144
PRO
119
L
PRO
120
n
145
PRO
120
L
SER
121
n
146
SER
121
L
ASP
122
n
147
ASP
122
L
GLU
123
n
148
GLU
123
L
GLN
124
n
149
GLN
124
L
LEU
125
n
150
LEU
125
L
LYS
126
n
151
LYS
126
L
SER
127
n
152
SER
127
L
GLY
128
n
153
GLY
128
L
THR
129
n
154
THR
129
L
ALA
130
n
155
ALA
130
L
SER
131
n
156
SER
131
L
VAL
132
n
157
VAL
132
L
VAL
133
n
158
VAL
133
L
CYS
134
n
159
CYS
134
L
LEU
135
n
160
LEU
135
L
LEU
136
n
161
LEU
136
L
ASN
137
n
162
ASN
137
L
ASN
138
n
163
ASN
138
L
PHE
139
n
164
PHE
139
L
TYR
140
n
165
TYR
140
L
PRO
141
n
166
PRO
141
L
ARG
142
n
167
ARG
142
L
GLU
143
n
168
GLU
143
L
ALA
144
n
169
ALA
144
L
LYS
145
n
170
LYS
145
L
VAL
146
n
171
VAL
146
L
GLN
147
n
172
GLN
147
L
TRP
148
n
173
TRP
148
L
LYS
149
n
174
LYS
149
L
VAL
150
n
175
VAL
150
L
ASP
151
n
176
ASP
151
L
ASN
152
n
177
ASN
152
L
ALA
153
n
178
ALA
153
L
LEU
154
n
179
LEU
154
L
GLN
155
n
180
GLN
155
L
SER
156
n
181
SER
156
L
GLY
157
n
182
GLY
157
L
ASN
158
n
183
ASN
158
L
SER
159
n
184
SER
159
L
GLN
160
n
185
GLN
160
L
GLU
161
n
186
GLU
161
L
SER
162
n
187
SER
162
L
VAL
163
n
188
VAL
163
L
THR
164
n
189
THR
164
L
GLU
165
n
190
GLU
165
L
GLN
166
n
191
GLN
166
L
ASP
167
n
192
ASP
167
L
SER
168
n
193
SER
168
L
LYS
169
n
194
LYS
169
L
ASP
170
n
195
ASP
170
L
SER
171
n
196
SER
171
L
THR
172
n
197
THR
172
L
TYR
173
n
198
TYR
173
L
SER
174
n
199
SER
174
L
LEU
175
n
200
LEU
175
L
SER
176
n
201
SER
176
L
SER
177
n
202
SER
177
L
THR
178
n
203
THR
178
L
LEU
179
n
204
LEU
179
L
THR
180
n
205
THR
180
L
LEU
181
n
206
LEU
181
L
SER
182
n
207
SER
182
L
LYS
183
n
208
LYS
183
L
ALA
184
n
209
ALA
184
L
ASP
185
n
210
ASP
185
L
TYR
186
n
211
TYR
186
L
GLU
187
n
212
GLU
187
L
LYS
188
n
213
LYS
188
L
HIS
189
n
214
HIS
189
L
LYS
190
n
215
LYS
190
L
VAL
191
n
216
VAL
191
L
TYR
192
n
217
TYR
192
L
ALA
193
n
218
ALA
193
L
CYS
194
n
219
CYS
194
L
GLU
195
n
220
GLU
195
L
VAL
196
n
221
VAL
196
L
THR
197
n
222
THR
197
L
HIS
198
n
223
HIS
198
L
GLN
199
n
224
GLN
199
L
GLY
200
n
225
GLY
200
L
LEU
201
n
226
LEU
201
L
SER
202
n
227
SER
202
L
SER
203
n
228
SER
203
L
PRO
204
n
229
PRO
204
L
VAL
205
n
230
VAL
205
L
THR
206
n
231
THR
206
L
LYS
207
n
232
LYS
207
L
SER
208
n
233
SER
208
L
PHE
209
n
234
PHE
209
L
ASN
210
n
235
ASN
210
L
ARG
211
n
236
ARG
211
L
GLY
212
n
237
GLY
212
L
GLU
213
n
238
GLU
213
L
n
239
214
L
n
1
-22
H
n
2
-21
H
n
3
-20
H
n
4
-19
H
n
5
-18
H
n
6
-17
H
n
7
-16
H
n
8
-15
H
n
9
-14
H
n
10
-13
H
n
11
-12
H
n
12
-11
H
n
13
-10
H
n
14
-9
H
n
15
-8
H
n
16
-7
H
n
17
-6
H
n
18
-5
H
n
19
-4
H
n
20
-3
H
n
21
-2
H
n
22
-1
H
n
23
0
H
GLN
1
n
24
GLN
1
H
VAL
2
n
25
VAL
2
H
GLN
3
n
26
GLN
3
H
LEU
4
n
27
LEU
4
H
VAL
5
n
28
VAL
5
H
GLN
6
n
29
GLN
6
H
SER
7
n
30
SER
7
H
GLY
8
n
31
GLY
8
H
ALA
9
n
32
ALA
9
H
GLU
10
n
33
GLU
10
H
VAL
11
n
34
VAL
11
H
LYS
12
n
35
LYS
12
H
LYS
13
n
36
LYS
13
H
PRO
14
n
37
PRO
14
H
GLY
15
n
38
GLY
15
H
SER
16
n
39
SER
16
H
SER
17
n
40
SER
17
H
VAL
18
n
41
VAL
18
H
LYS
19
n
42
LYS
19
H
VAL
20
n
43
VAL
20
H
SER
21
n
44
SER
21
H
CYS
22
n
45
CYS
22
H
LYS
23
n
46
LYS
23
H
ALA
24
n
47
ALA
24
H
SER
25
n
48
SER
25
H
GLY
26
n
49
GLY
26
H
ASN
27
n
50
ASN
27
H
SER
28
n
51
SER
28
H
PHE
29
n
52
PHE
29
H
SER
30
n
53
SER
30
H
ASN
31
n
54
ASN
31
H
HIS
32
n
55
HIS
32
H
ASP
33
n
56
ASP
33
H
VAL
34
n
57
VAL
34
H
HIS
35
n
58
HIS
35
H
TRP
36
n
59
TRP
36
H
VAL
37
n
60
VAL
37
H
ARG
38
n
61
ARG
38
H
GLN
39
n
62
GLN
39
H
ALA
40
n
63
ALA
40
H
THR
41
n
64
THR
41
H
GLY
42
n
65
GLY
42
H
GLN
43
n
66
GLN
43
H
GLY
44
n
67
GLY
44
H
LEU
45
n
68
LEU
45
H
GLU
46
n
69
GLU
46
H
TRP
47
n
70
TRP
47
H
MET
48
n
71
MET
48
H
GLY
49
n
72
GLY
49
H
TRP
50
n
73
TRP
50
H
MET
51
n
74
MET
51
H
SER
52
n
75
SER
52
H
HIS
52
n
76
A
HIS
52
H
GLU
52
n
77
B
GLU
52
H
GLY
52
n
78
C
GLY
52
H
ASP
53
n
79
ASP
53
H
LYS
54
n
80
LYS
54
H
THR
55
n
81
THR
55
H
GLY
56
n
82
GLY
56
H
LEU
57
n
83
LEU
57
H
ALA
58
n
84
ALA
58
H
GLN
59
n
85
GLN
59
H
LYS
60
n
86
LYS
60
H
PHE
61
n
87
PHE
61
H
GLN
62
n
88
GLN
62
H
GLY
63
n
89
GLY
63
H
ARG
64
n
90
ARG
64
H
VAL
65
n
91
VAL
65
H
THR
68
n
92
THR
68
H
ILE
69
n
93
ILE
69
H
THR
70
n
94
THR
70
H
ARG
71
n
95
ARG
71
H
ASP
72
n
96
ASP
72
H
SER
73
n
97
SER
73
H
GLY
74
n
98
GLY
74
H
ALA
75
n
99
ALA
75
H
SER
76
n
100
SER
76
H
THR
77
n
101
THR
77
H
VAL
78
n
102
VAL
78
H
TYR
79
n
103
TYR
79
H
MET
80
n
104
MET
80
H
GLU
81
n
105
GLU
81
H
LEU
82
n
106
LEU
82
H
ARG
82
n
107
A
ARG
82
H
GLY
82
n
108
B
GLY
82
H
LEU
82
n
109
C
LEU
82
H
THR
83
n
110
THR
83
H
ALA
84
n
111
ALA
84
H
ASP
85
n
112
ASP
85
H
ASP
86
n
113
ASP
86
H
THR
87
n
114
THR
87
H
ALA
88
n
115
ALA
88
H
ILE
89
n
116
ILE
89
H
TYR
90
n
117
TYR
90
H
TYR
91
n
118
TYR
91
H
CYS
92
n
119
CYS
92
H
LEU
93
n
120
LEU
93
H
THR
94
n
121
THR
94
H
GLY
95
n
122
GLY
95
H
SER
96
n
123
SER
96
H
LYS
97
n
124
LYS
97
H
HIS
98
n
125
HIS
98
H
ARG
99
n
126
ARG
99
H
LEU
100
n
127
LEU
100
H
ARG
100
n
128
A
ARG
100
H
ASP
100
n
129
B
ASP
100
H
TYR
100
n
130
C
TYR
100
H
PHE
100
n
131
D
PHE
100
H
LEU
100
n
132
E
LEU
100
H
TYS
100
n
133
F
TYS
100
H
ASN
100
n
134
G
ASN
100
H
GLU
100
n
135
H
GLU
100
H
TYS
100
n
136
I
TYS
100
H
GLY
100
n
137
J
GLY
100
H
PRO
100
n
138
K
PRO
100
H
ASN
100
n
139
L
ASN
100
H
TYR
100
n
140
M
TYR
100
H
GLU
100
n
141
N
GLU
100
H
GLU
100
n
142
O
GLU
100
H
TRP
100
n
143
P
TRP
100
H
GLY
100
n
144
Q
GLY
100
H
ASP
100
n
145
R
ASP
100
H
TYR
101
n
146
TYR
101
H
LEU
102
n
147
LEU
102
H
ALA
103
n
148
ALA
103
H
THR
104
n
149
THR
104
H
LEU
105
n
150
LEU
105
H
ASP
106
n
151
ASP
106
H
VAL
107
n
152
VAL
107
H
TRP
108
n
153
TRP
108
H
GLY
109
n
154
GLY
109
H
HIS
110
n
155
HIS
110
H
GLY
111
n
156
GLY
111
H
THR
112
n
157
THR
112
H
ALA
113
n
158
ALA
113
H
VAL
114
n
159
VAL
114
H
THR
115
n
160
THR
115
H
VAL
116
n
161
VAL
116
H
SER
117
n
162
SER
117
H
SER
118
n
163
SER
118
H
ALA
119
n
164
ALA
119
H
SER
120
n
165
SER
120
H
THR
121
n
166
THR
121
H
LYS
122
n
167
LYS
122
H
GLY
123
n
168
GLY
123
H
PRO
124
n
169
PRO
124
H
SER
125
n
170
SER
125
H
VAL
126
n
171
VAL
126
H
PHE
127
n
172
PHE
127
H
PRO
128
n
173
PRO
128
H
LEU
129
n
174
LEU
129
H
ALA
130
n
175
ALA
130
H
PRO
131
n
176
PRO
131
H
SER
132
n
177
SER
132
H
SER
133
n
178
SER
133
H
LYS
134
n
179
LYS
134
H
SER
135
n
180
SER
135
H
THR
136
n
181
THR
136
H
SER
137
n
182
SER
137
H
GLY
138
n
183
GLY
138
H
GLY
139
n
184
GLY
139
H
THR
140
n
185
THR
140
H
ALA
141
n
186
ALA
141
H
ALA
142
n
187
ALA
142
H
LEU
143
n
188
LEU
143
H
GLY
144
n
189
GLY
144
H
CYS
145
n
190
CYS
145
H
LEU
146
n
191
LEU
146
H
VAL
147
n
192
VAL
147
H
LYS
148
n
193
LYS
148
H
ASP
149
n
194
ASP
149
H
TYR
150
n
195
TYR
150
H
PHE
151
n
196
PHE
151
H
PRO
152
n
197
PRO
152
H
GLU
153
n
198
GLU
153
H
PRO
154
n
199
PRO
154
H
VAL
155
n
200
VAL
155
H
THR
156
n
201
THR
156
H
VAL
157
n
202
VAL
157
H
SER
158
n
203
SER
158
H
TRP
159
n
204
TRP
159
H
ASN
160
n
205
ASN
160
H
SER
161
n
206
SER
161
H
GLY
162
n
207
GLY
162
H
ALA
163
n
208
ALA
163
H
LEU
164
n
209
LEU
164
H
THR
165
n
210
THR
165
H
SER
166
n
211
SER
166
H
GLY
167
n
212
GLY
167
H
VAL
168
n
213
VAL
168
H
HIS
169
n
214
HIS
169
H
THR
170
n
215
THR
170
H
PHE
171
n
216
PHE
171
H
PRO
172
n
217
PRO
172
H
ALA
173
n
218
ALA
173
H
VAL
174
n
219
VAL
174
H
LEU
175
n
220
LEU
175
H
GLN
176
n
221
GLN
176
H
SER
177
n
222
SER
177
H
SER
178
n
223
SER
178
H
GLY
179
n
224
GLY
179
H
LEU
180
n
225
LEU
180
H
TYR
181
n
226
TYR
181
H
SER
182
n
227
SER
182
H
LEU
183
n
228
LEU
183
H
SER
184
n
229
SER
184
H
SER
185
n
230
SER
185
H
VAL
186
n
231
VAL
186
H
VAL
187
n
232
VAL
187
H
THR
188
n
233
THR
188
H
VAL
189
n
234
VAL
189
H
PRO
190
n
235
PRO
190
H
SER
191
n
236
SER
191
H
SER
192
n
237
SER
192
H
SER
193
n
238
SER
193
H
LEU
194
n
239
LEU
194
H
GLY
195
n
240
GLY
195
H
THR
196
n
241
THR
196
H
GLN
197
n
242
GLN
197
H
THR
198
n
243
THR
198
H
TYR
199
n
244
TYR
199
H
ILE
200
n
245
ILE
200
H
CYS
201
n
246
CYS
201
H
ASN
202
n
247
ASN
202
H
VAL
203
n
248
VAL
203
H
ASN
204
n
249
ASN
204
H
HIS
205
n
250
HIS
205
H
LYS
206
n
251
LYS
206
H
PRO
207
n
252
PRO
207
H
SER
208
n
253
SER
208
H
ASN
209
n
254
ASN
209
H
THR
210
n
255
THR
210
H
LYS
211
n
256
LYS
211
H
VAL
212
n
257
VAL
212
H
ASP
213
n
258
ASP
213
H
LYS
214
n
259
LYS
214
H
LYS
215
n
260
LYS
215
H
VAL
216
n
261
VAL
216
H
GLU
217
n
262
GLU
217
H
PRO
218
n
263
PRO
218
H
n
264
219
H
n
265
220
H
n
266
221
H
n
267
222
H
0.0477
0.0428
-0.0556
0.4454
-0.3350
0.2861
0.0073
0.0056
0.0142
0.0360
0.0044
0.0240
-0.0170
-0.0104
-0.0117
0.0267
-0.0008
0.0007
0.0281
-0.0019
0.0127
refined
2.6412
38.0771
-18.4103
X-RAY DIFFRACTION
0.1005
0.1605
-0.0901
0.5106
-0.2769
0.1839
-0.0010
-0.0193
0.0065
-0.0385
-0.0068
-0.0269
0.0440
0.0200
0.0078
0.0315
-0.0021
-0.0010
0.0294
-0.0052
0.0074
refined
10.9787
21.7270
-20.4163
X-RAY DIFFRACTION
L
2
L
213
X-RAY DIFFRACTION
1
L
215
L
219
X-RAY DIFFRACTION
1
L
220
L
365
X-RAY DIFFRACTION
1
H
1
H
218
X-RAY DIFFRACTION
2
H
223
H
224
X-RAY DIFFRACTION
2
H
225
H
395
X-RAY DIFFRACTION
2
author_and_software_defined_assembly
PISA
2
dimeric
4770
-82
21910
F
H
TYS
100
O-SULFO-L-TYROSINE
B
TYS
133
TYR
I
H
TYS
100
O-SULFO-L-TYROSINE
B
TYS
136
TYR
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
L
N
SER
7
A
N
SER
27
L
O
SER
22
A
O
SER
42
L
N
ALA
19
A
N
ALA
39
L
O
ILE
75
A
O
ILE
100
L
O
LYS
74
A
O
LYS
99
L
N
SER
63
A
N
SER
88
L
N
LEU
11
A
N
LEU
31
L
O
LYS
103
A
O
LYS
128
L
O
VAL
104
A
O
VAL
129
L
N
GLY
84
A
N
GLY
109
L
O
TYR
87
A
O
TYR
112
L
N
TYR
36
A
N
TYR
61
L
N
TRP
35
A
N
TRP
60
L
O
LEU
47
A
O
LEU
72
L
N
HIS
49
A
N
HIS
74
L
O
HIS
53
A
O
HIS
78
L
N
LEU
11
A
N
LEU
31
L
O
LYS
103
A
O
LYS
128
L
O
VAL
104
A
O
VAL
129
L
N
GLY
84
A
N
GLY
109
L
N
GLN
90
A
N
GLN
115
L
O
THR
97
A
O
THR
122
L
N
SER
114
A
N
SER
139
L
O
ASN
137
A
O
ASN
162
L
N
LEU
136
A
N
LEU
161
L
O
LEU
175
A
O
LEU
200
L
O
THR
178
A
O
THR
203
L
N
GLN
160
A
N
GLN
185
L
O
ALA
153
A
O
ALA
178
L
N
VAL
150
A
N
VAL
175
L
N
GLN
147
A
N
GLN
172
L
O
GLU
195
A
O
GLU
220
L
N
CYS
194
A
N
CYS
219
L
O
LYS
207
A
O
LYS
232
H
N
VAL
5
B
N
VAL
28
H
O
LYS
23
B
O
LYS
46
H
N
VAL
20
B
N
VAL
43
H
O
MET
80
B
O
MET
104
H
O
TYR
79
B
O
TYR
103
H
N
THR
70
B
N
THR
94
H
N
LYS
12
B
N
LYS
35
H
O
THR
115
B
O
THR
160
H
O
THR
112
B
O
THR
157
H
N
TYR
90
B
N
TYR
117
H
O
TYR
91
B
O
TYR
118
H
N
VAL
37
B
N
VAL
60
H
N
TRP
36
B
N
TRP
59
H
O
MET
48
B
O
MET
71
H
N
TRP
50
B
N
TRP
73
H
O
GLY
56
B
O
GLY
82
H
N
LYS
12
B
N
LYS
35
H
O
THR
115
B
O
THR
160
H
O
THR
112
B
O
THR
157
H
N
TYR
90
B
N
TYR
117
H
N
THR
94
B
N
THR
121
H
O
ASP
106
B
O
ASP
151
H
N
PHE
127
B
N
PHE
172
H
O
LEU
146
B
O
LEU
191
H
N
ALA
141
B
N
ALA
186
H
O
VAL
189
B
O
VAL
234
H
O
VAL
186
B
O
VAL
231
H
N
HIS
169
B
N
HIS
214
H
N
SER
137
B
N
SER
182
H
O
THR
140
B
O
THR
185
H
N
ALA
141
B
N
ALA
186
H
O
VAL
189
B
O
VAL
234
H
O
SER
182
B
O
SER
227
H
N
VAL
174
B
N
VAL
219
H
N
SER
158
B
N
SER
203
H
O
ASN
202
B
O
ASN
247
H
N
VAL
203
B
N
VAL
248
H
O
VAL
212
B
O
VAL
257
1
L
MET
-19
A
MET
1
1
Y
1
L
ARG
-18
A
ARG
2
1
Y
1
L
LEU
-17
A
LEU
3
1
Y
1
L
PRO
-16
A
PRO
4
1
Y
1
L
ALA
-15
A
ALA
5
1
Y
1
L
GLN
-14
A
GLN
6
1
Y
1
L
LEU
-13
A
LEU
7
1
Y
1
L
LEU
-12
A
LEU
8
1
Y
1
L
GLY
-11
A
GLY
9
1
Y
1
L
LEU
-10
A
LEU
10
1
Y
1
L
LEU
-9
A
LEU
11
1
Y
1
L
MET
-8
A
MET
12
1
Y
1
L
LEU
-7
A
LEU
13
1
Y
1
L
TRP
-6
A
TRP
14
1
Y
1
L
VAL
-5
A
VAL
15
1
Y
1
L
SER
-4
A
SER
16
1
Y
1
L
GLY
-3
A
GLY
17
1
Y
1
L
SER
-2
A
SER
18
1
Y
1
L
GLY
-1
A
GLY
19
1
Y
1
L
ALA
0
A
ALA
20
1
Y
1
L
GLU
1
A
GLU
21
1
Y
1
L
CYS
214
A
CYS
239
1
Y
1
H
GLN
-22
B
GLN
1
1
Y
1
H
ALA
-21
B
ALA
2
1
Y
1
H
SER
-20
B
SER
3
1
Y
1
H
THR
-19
B
THR
4
1
Y
1
H
MET
-18
B
MET
5
1
Y
1
H
ASP
-17
B
ASP
6
1
Y
1
H
TRP
-16
B
TRP
7
1
Y
1
H
ILE
-15
B
ILE
8
1
Y
1
H
TRP
-14
B
TRP
9
1
Y
1
H
ARG
-13
B
ARG
10
1
Y
1
H
ILE
-12
B
ILE
11
1
Y
1
H
LEU
-11
B
LEU
12
1
Y
1
H
PHE
-10
B
PHE
13
1
Y
1
H
LEU
-9
B
LEU
14
1
Y
1
H
VAL
-8
B
VAL
15
1
Y
1
H
ALA
-7
B
ALA
16
1
Y
1
H
ALA
-6
B
ALA
17
1
Y
1
H
ALA
-5
B
ALA
18
1
Y
1
H
THR
-4
B
THR
19
1
Y
1
H
SER
-3
B
SER
20
1
Y
1
H
ALA
-2
B
ALA
21
1
Y
1
H
HIS
-1
B
HIS
22
1
Y
1
H
SER
0
B
SER
23
1
Y
1
H
LYS
219
B
LYS
264
1
Y
1
H
SER
220
B
SER
265
1
Y
1
H
CYS
221
B
CYS
266
1
Y
1
H
ASP
222
B
ASP
267
1
Y
1
-11.58
1.90
111.40
99.82
H
H
H
CB
CA
C
VAL
VAL
VAL
34
34
34
N
1
L
ALA
51
74.08
-38.36
1
H
ASP
106
-109.63
-80.41
1
H
ASP
149
67.29
64.86
34.339
1.24
0.00
0.00
1.24
0.00
-2.47
0.946
0.926
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.22785
0.19463
0.19633
2.30
50.00
1656
32853
31036
5.1
99.98
11.849
0.129
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.225
0.188
0.80
0.80
1.40
3MUG
MAXIMUM LIKELIHOOD
MASK
2.30
50.00
313
3840
36
0
3491
0.009
0.021
3609
1.217
1.955
4916
6.303
5.000
454
36.475
24.126
143
14.652
15.000
566
22.396
15.000
14
0.078
0.200
543
0.005
0.021
2694
0.755
1.500
2266
1.443
2.000
3659
1.780
3.000
1343
2.977
4.500
1257
0.271
0.246
2.360
121
2235
20
100.00
2.3
50
3U1S
32853
32493
0.087
1
19.1
8.4
99.2
0.472
2.3
2.4
4.1
1
8.6
99.9
data collection
Blu-Ice
phasing
PHASER
refinement
REFMAC
5.5.0109
data reduction
XDS
data scaling
XDS
Crystal structure of human Fab PGT145, a broadly reactive and potent HIV-1 neutralizing antibody
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
4
N
N
3
N
N
3
N
N
5
N
N
5
N
N
L
GLU
79
A
GLU
104
HELX_P
L
VAL
83
A
VAL
108
5
1
5
L
SER
121
A
SER
146
HELX_P
L
SER
127
A
SER
152
1
2
7
L
LYS
183
A
LYS
208
HELX_P
L
GLU
187
A
GLU
212
1
3
5
H
GLY
26
B
GLY
49
HELX_P
H
ASN
31
B
ASN
54
5
4
6
H
GLN
59
B
GLN
85
HELX_P
H
GLN
62
B
GLN
88
5
5
4
H
SER
73
B
SER
97
HELX_P
H
SER
76
B
SER
100
5
6
4
H
THR
83
B
THR
110
HELX_P
H
THR
87
B
THR
114
5
7
5
H
SER
132
B
SER
177
HELX_P
H
LYS
134
B
LYS
179
5
8
3
H
SER
161
B
SER
206
HELX_P
H
ALA
163
B
ALA
208
5
9
3
H
SER
192
B
SER
237
HELX_P
H
THR
196
B
THR
241
5
10
5
H
LYS
206
B
LYS
251
HELX_P
H
ASN
209
B
ASN
254
5
11
4
disulf
2.114
L
CYS
23
A
SG
CYS
43
1_555
L
CYS
88
A
SG
CYS
113
1_555
disulf
2.043
L
CYS
134
A
SG
CYS
159
1_555
L
CYS
194
A
SG
CYS
219
1_555
disulf
2.064
H
CYS
22
B
SG
CYS
45
1_555
H
CYS
92
B
SG
CYS
119
1_555
disulf
2.059
H
CYS
145
B
SG
CYS
190
1_555
H
CYS
201
B
SG
CYS
246
1_555
covale
1.327
both
F
G
H
TYS
100
B
C
TYS
133
1_555
H
ASN
100
B
N
ASN
134
1_555
covale
1.327
both
I
J
H
TYS
100
B
C
TYS
136
1_555
H
GLY
100
B
N
GLY
137
1_555
IMMUNE SYSTEM
IgG, broadly neutralizing antibody, HIV-1 gp120, IMMUNE SYSTEM
L
SER
7
A
SER
27
1
L
PRO
8
A
PRO
28
-5.44
L
SER
94
A
SER
119
1
L
PRO
95
A
PRO
120
1.01
L
TYR
140
A
TYR
165
1
L
PRO
141
A
PRO
166
3.73
H
PHE
151
B
PHE
196
1
H
PRO
152
B
PRO
197
-8.69
H
GLU
153
B
GLU
198
1
H
PRO
154
B
PRO
199
3.05
3U1S
PDB
1
3U1S
MRLPAQLLGLLMLWVSGSGAEVVITQSPLFLPVTPGEAASLSCKCSHSLQHSTGANYLAWYLQRPGQTPRLLIHLATHRA
SGVPDRFSGSGSGTDFTLKISRVESDDVGTYYCMQGLHSPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCL
LNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
3U1S
PDB
2
3U1S
QASTMDWIWRILFLVAAATSAHSQVQLVQSGAEVKKPGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDK
TGLAQKFQGRVTITRDSGASTVYMELRGLTADDTAIYYCLTGSKHRLRDYFL(TYS)NE(TYS)GPNYEEWGDYLATLDV
WGHGTAVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVV
TVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
-19
214
3U1S
-19
214
3U1S
L
1
1
239
-22
222
3U1S
-22
222
3U1S
H
2
1
267
4
6
4
4
4
4
6
4
4
4
3
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
L
ILE
4
A
ILE
24
L
SER
7
A
SER
27
L
ALA
19
A
ALA
39
L
CYS
25
A
CYS
45
L
ASP
70
A
ASP
95
L
ILE
75
A
ILE
100
L
PHE
62
A
PHE
87
L
SER
67
A
SER
92
L
PHE
10
A
PHE
30
L
VAL
13
A
VAL
33
L
THR
102
A
THR
127
L
ILE
106
A
ILE
131
L
GLY
84
A
GLY
109
L
GLN
90
A
GLN
115
L
LEU
33
A
LEU
58
L
GLN
38
A
GLN
63
L
ARG
45
A
ARG
70
L
HIS
49
A
HIS
74
L
HIS
53
A
HIS
78
L
ARG
54
A
ARG
79
L
PHE
10
A
PHE
30
L
VAL
13
A
VAL
33
L
THR
102
A
THR
127
L
ILE
106
A
ILE
131
L
GLY
84
A
GLY
109
L
GLN
90
A
GLN
115
L
THR
97
A
THR
122
L
PHE
98
A
PHE
123
L
SER
114
A
SER
139
L
PHE
118
A
PHE
143
L
THR
129
A
THR
154
L
PHE
139
A
PHE
164
L
TYR
173
A
TYR
198
L
SER
182
A
SER
207
L
SER
159
A
SER
184
L
VAL
163
A
VAL
188
L
ALA
153
A
ALA
178
L
LEU
154
A
LEU
179
L
ALA
144
A
ALA
169
L
VAL
150
A
VAL
175
L
VAL
191
A
VAL
216
L
HIS
198
A
HIS
223
L
VAL
205
A
VAL
230
L
ASN
210
A
ASN
235
H
LEU
4
B
LEU
27
H
GLN
6
B
GLN
29
H
VAL
18
B
VAL
41
H
ALA
24
B
ALA
47
H
VAL
78
B
VAL
102
H
LEU
82
B
LEU
106
H
VAL
65
B
VAL
91
H
ARG
71
B
ARG
95
H
GLU
10
B
GLU
33
H
LYS
12
B
LYS
35
H
THR
112
B
THR
157
H
VAL
116
B
VAL
161
H
ALA
88
B
ALA
115
H
LEU
100
B
LEU
132
E
H
ASP
33
B
ASP
56
H
GLN
39
B
GLN
62
H
GLU
46
B
GLU
69
H
MET
51
B
MET
74
H
THR
55
B
THR
81
H
LEU
57
B
LEU
83
H
GLU
10
B
GLU
33
H
LYS
12
B
LYS
35
H
THR
112
B
THR
157
H
VAL
116
B
VAL
161
H
ALA
88
B
ALA
115
H
LEU
100
B
LEU
132
E
H
TYR
100
B
TYR
140
H
TRP
108
B
TRP
153
M
H
SER
125
B
SER
170
H
LEU
129
B
LEU
174
H
THR
140
B
THR
185
H
TYR
150
B
TYR
195
H
TYR
181
B
TYR
226
H
PRO
190
B
PRO
235
H
VAL
168
B
VAL
213
H
THR
170
B
THR
215
H
THR
136
B
THR
181
H
SER
137
B
SER
182
H
THR
140
B
THR
185
H
TYR
150
B
TYR
195
H
TYR
181
B
TYR
226
H
PRO
190
B
PRO
235
H
VAL
174
B
VAL
219
H
LEU
175
B
LEU
220
H
THR
156
B
THR
201
H
TRP
159
B
TRP
204
H
ILE
200
B
ILE
245
H
HIS
205
B
HIS
250
H
THR
210
B
THR
255
H
LYS
215
B
LYS
260
BINDING SITE FOR RESIDUE SO4 L 215
L
SO4
215
Software
2
BINDING SITE FOR RESIDUE SO4 L 216
L
SO4
216
Software
4
BINDING SITE FOR RESIDUE SO4 L 217
L
SO4
217
Software
5
BINDING SITE FOR RESIDUE SO4 L 218
L
SO4
218
Software
5
BINDING SITE FOR RESIDUE GOL L 219
L
GOL
219
Software
2
BINDING SITE FOR RESIDUE SO4 H 223
H
SO4
223
Software
5
BINDING SITE FOR RESIDUE SO4 H 224
H
SO4
224
Software
10
L
ARG
39
A
ARG
64
2
1_555
L
ARG
45
A
ARG
70
2
1_555
L
ARG
54
A
ARG
79
4
1_555
L
HOH
221
J
HOH
4
1_555
L
HOH
258
J
HOH
4
1_555
L
HOH
279
J
HOH
4
1_555
H
SER
133
B
SER
178
5
4_454
H
LYS
134
B
LYS
179
5
4_454
L
LYS
188
A
LYS
213
5
1_555
L
LYS
207
A
LYS
232
5
4_454
L
HOH
315
J
HOH
5
4_454
L
GLY
41
A
GLY
66
5
1_555
L
GLN
42
A
GLN
67
5
1_555
L
THR
43
A
THR
68
5
1_555
L
ARG
45
A
ARG
70
5
1_555
L
HOH
294
J
HOH
5
1_555
L
LEU
9
A
LEU
29
2
1_555
L
PHE
10
A
PHE
30
2
1_555
H
ARG
71
B
ARG
95
5
1_555
H
ASP
72
B
ASP
96
5
1_555
H
SER
73
B
SER
97
5
1_555
H
GLY
74
B
GLY
98
5
1_555
H
ALA
75
B
ALA
99
5
1_555
H
HIS
52
B
HIS
76
A
10
1_555
H
HIS
52
B
HIS
76
A
10
7_555
H
GLU
52
B
GLU
77
B
10
7_555
H
GLU
52
B
GLU
77
B
10
1_555
H
LYS
97
B
LYS
124
10
1_555
H
LYS
97
B
LYS
124
10
7_555
H
ARG
99
B
ARG
126
10
7_555
H
ARG
99
B
ARG
126
10
1_555
H
HOH
305
K
HOH
10
7_555
H
HOH
305
K
HOH
10
1_555
92
P 41 21 2