0.016092
0.000000
0.000000
0.000000
0.013306
0.000000
0.000000
0.000000
0.007748
0.00000
0.00000
0.00000
Filippova, E.V.
Minasov, G.
Shuvalova, L.
Kiryukhina, O.
Massa, C.
Schirmer, T.
Joachimiak, A.
Anderson, W.F.
Midwest Center for Structural Genomics (MCSG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
62.144
75.154
129.066
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O8 P
363.221
y
GUANOSINE-5'-MONOPHOSPHATE
RNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
O
N
89
N
P
N
90
N
O
N
91
N
O
N
92
N
O
N
93
N
C
N
94
R
C
N
95
N
O
N
96
S
C
N
97
N
O
N
98
R
C
N
99
N
O
N
100
R
C
Y
101
N
N
Y
102
N
C
Y
103
N
N
Y
104
N
C
N
105
N
C
N
106
N
O
N
107
N
N
N
108
N
C
N
109
N
N
N
110
N
N
Y
111
N
C
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
N
N
127
S
C
N
128
N
C
N
129
N
O
N
130
N
C
N
131
N
C
N
132
N
C
N
133
N
O
N
134
N
N
N
135
N
O
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
N
N
147
S
C
N
148
N
C
N
149
N
O
N
150
N
C
N
151
N
C
N
152
N
C
N
153
N
O
N
154
N
O
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
N
N
166
N
C
N
167
N
C
N
168
N
O
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
N
N
176
S
C
N
177
N
C
N
178
N
O
N
179
N
C
Y
180
N
C
Y
181
N
N
Y
182
N
C
Y
183
N
C
Y
184
N
N
N
185
N
O
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
O
N
197
N
H
N
198
N
H
N
199
N
N
N
200
S
C
N
201
N
C
N
202
N
O
N
203
S
C
N
204
N
C
N
205
N
C
N
206
N
C
N
207
N
O
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
N
N
222
S
C
N
223
N
C
N
224
N
O
N
225
N
C
N
226
N
C
N
227
N
C
N
228
N
C
N
229
N
O
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
N
N
244
S
C
N
245
N
C
N
246
N
O
N
247
N
C
N
248
N
C
N
249
N
C
N
250
N
C
N
251
N
N
N
252
N
O
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
MG
N
269
N
N
N
270
S
C
N
271
N
C
N
272
N
O
N
273
N
O
N
274
N
C
N
275
N
C
N
276
N
SE
N
277
N
C
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
N
N
290
S
C
N
291
N
C
N
292
N
O
N
293
N
C
Y
294
N
C
Y
295
N
C
Y
296
N
C
Y
297
N
C
Y
298
N
C
Y
299
N
C
N
300
N
O
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
N
N
313
S
C
N
314
N
C
N
315
N
O
N
316
N
C
N
317
N
C
N
318
N
C
N
319
N
O
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
N
N
330
S
C
N
331
N
C
N
332
N
O
N
333
N
C
N
334
N
O
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
N
N
344
S
C
N
345
N
C
N
346
N
O
N
347
R
C
N
348
N
O
N
349
N
C
N
350
N
O
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
N
N
361
S
C
N
362
N
C
N
363
N
O
N
364
N
C
Y
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
N
Y
369
N
C
Y
370
N
C
Y
371
N
C
Y
372
N
C
Y
373
N
C
N
374
N
O
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
N
N
388
S
C
N
389
N
C
N
390
N
O
N
391
N
C
Y
392
N
C
Y
393
N
C
Y
394
N
C
Y
395
N
C
Y
396
N
C
Y
397
N
C
N
398
N
O
N
399
N
O
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
N
N
412
S
C
N
413
N
C
N
414
N
O
N
415
N
C
N
416
N
C
N
417
N
C
N
418
N
O
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
Y
107
N
sing
Y
108
N
sing
Y
109
N
doub
N
110
N
sing
Y
111
N
sing
N
112
N
sing
Y
113
N
doub
N
114
N
doub
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
doub
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
doub
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
doub
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
Y
180
N
sing
Y
181
N
doub
Y
182
N
doub
N
183
N
sing
Y
184
N
sing
N
185
N
sing
Y
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
doub
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
doub
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
doub
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
Y
288
N
doub
Y
289
N
sing
Y
290
N
sing
N
291
N
sing
Y
292
N
doub
N
293
N
sing
Y
294
N
doub
N
295
N
sing
Y
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
doub
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
doub
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
doub
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
doub
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
Y
357
N
doub
Y
358
N
sing
Y
359
N
sing
N
360
N
sing
Y
361
N
doub
Y
362
N
sing
Y
363
N
sing
N
364
N
sing
Y
365
N
sing
Y
366
N
doub
N
367
N
sing
Y
368
N
doub
N
369
N
sing
Y
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
doub
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
Y
385
N
doub
Y
386
N
sing
Y
387
N
sing
N
388
N
sing
Y
389
N
doub
N
390
N
sing
Y
391
N
doub
N
392
N
sing
Y
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
doub
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
To be Published
0353
EAL domain from Caulobacter crescentus in complex with 5'-pGpG and Mg++
10.2210/pdb3u2e/pdb
pdb_00003u2e
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
BE
CCD
2011-08-24
MARMOSAIC 225 mm CCD
C(111)
SINGLE WAVELENGTH
M
x-ray
1
0.97872
1.0
21-ID-F
APS
0.97872
SYNCHROTRON
APS BEAMLINE 21-ID-F
28746.342
GGDEF family protein
2
man
polymer
645.454
RNA (5'-R(P*GP*G)-3')
2
syn
polymer
24.305
MAGNESIUM ION
6
syn
non-polymer
18.015
water
154
nat
water
no
yes
LSRLALEADLRGAIGRGEITPYFQPIVRLSTGALSGFEALARWIHPRRG(MSE)LPPDEFLPLIEE(MSE)GL(MSE)SE
LGAH(MSE)(MSE)HAAAQQLSTWRAAHPA(MSE)GNLTVSVNLSTGEIDRPGLVADVAETLRVNRLPRGALKLEVTESD
I(MSE)RDPERAAVILKTLRDAGAGLALDDFGTGFSSLSYLTRLPFDTLKIDRYFVRT(MSE)GNNAGSAKIVRSVVKLG
QDLDLEVVAEGVENAE(MSE)AHALQSLGCDYGQGFGYAPALSPQEAEVYLNEAYVD
LSRLALEADLRGAIGRGEITPYFQPIVRLSTGALSGFEALARWIHPRRGMLPPDEFLPLIEEMGLMSELGAHMMHAAAQQ
LSTWRAAHPAMGNLTVSVNLSTGEIDRPGLVADVAETLRVNRLPRGALKLEVTESDIMRDPERAAVILKTLRDAGAGLAL
DDFGTGFSSLSYLTRLPFDTLKIDRYFVRTMGNNAGSAKIVRSVVKLGQDLDLEVVAEGVENAEMAHALQSLGCDYGQGF
GYAPALSPQEAEVYLNEAYVD
A,B
apc106607
polypeptide(L)
no
no
GG
GG
C,D
polyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
CB15
sample
CC_3396
190650
Caulobacter vibrioides
562
Escherichia coli
BL21 (DE3) magic
PLASMID
pMCSG7
1
2.56
52.02
VAPOR DIFFUSION, SITTING DROP
8.3
0.2 M Magnesium chloride hexahydrate, 20% w/v PEG3350, pH 8.3, VAPOR DIFFUSION, SITTING DROP, temperature 293K
293
Midwest Center for Structural Genomics
MCSG
PSI:Biology
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
chem_comp_atom
chem_comp_bond
repository
Initial release
Structure summary
Structure summary
Refinement description
Data collection
Database references
Derived calculations
Refinement description
Data collection
1
0
2011-10-12
1
1
2016-08-31
1
2
2016-10-12
1
3
2017-11-08
1
4
2023-09-13
1
5
2023-12-06
_software.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_chem_comp_atom.atom_id
_chem_comp_bond.atom_id_2
Y
RCSB
Y
RCSB
2011-10-03
REL
REL
MG
MAGNESIUM ION
HOH
water
ACCORDING TO PROTEOLYSIS THE PROTEIN WAS DEGRADED AND ONLY PART OF THE PROTEIN WAS CRYSTALLIZED WHICH IS SEEN IN THE CRYSTAL STRUCTURE
3S83
pdb entry 3S83
PDB
experimental model
MG
2
3
MG
MG
2
A
MG
3
3
MG
MG
3
A
MG
1
3
MG
MG
1
B
MG
4
3
MG
MG
4
B
MG
5
3
MG
MG
5
C
MG
6
3
MG
MG
6
D
HOH
1
4
HOH
HOH
1
A
HOH
4
4
HOH
HOH
4
A
HOH
9
4
HOH
HOH
9
A
HOH
10
4
HOH
HOH
10
A
HOH
12
4
HOH
HOH
12
A
HOH
17
4
HOH
HOH
17
A
HOH
19
4
HOH
HOH
19
A
HOH
20
4
HOH
HOH
20
A
HOH
23
4
HOH
HOH
23
A
HOH
25
4
HOH
HOH
25
A
HOH
26
4
HOH
HOH
26
A
HOH
29
4
HOH
HOH
29
A
HOH
31
4
HOH
HOH
31
A
HOH
32
4
HOH
HOH
32
A
HOH
33
4
HOH
HOH
33
A
HOH
35
4
HOH
HOH
35
A
HOH
37
4
HOH
HOH
37
A
HOH
39
4
HOH
HOH
39
A
HOH
43
4
HOH
HOH
43
A
HOH
44
4
HOH
HOH
44
A
HOH
45
4
HOH
HOH
45
A
HOH
46
4
HOH
HOH
46
A
HOH
53
4
HOH
HOH
53
A
HOH
55
4
HOH
HOH
55
A
HOH
59
4
HOH
HOH
59
A
HOH
67
4
HOH
HOH
67
A
HOH
68
4
HOH
HOH
68
A
HOH
69
4
HOH
HOH
69
A
HOH
70
4
HOH
HOH
70
A
HOH
71
4
HOH
HOH
71
A
HOH
84
4
HOH
HOH
84
A
HOH
85
4
HOH
HOH
85
A
HOH
86
4
HOH
HOH
86
A
HOH
87
4
HOH
HOH
87
A
HOH
90
4
HOH
HOH
90
A
HOH
91
4
HOH
HOH
91
A
HOH
92
4
HOH
HOH
92
A
HOH
93
4
HOH
HOH
93
A
HOH
96
4
HOH
HOH
96
A
HOH
97
4
HOH
HOH
97
A
HOH
98
4
HOH
HOH
98
A
HOH
99
4
HOH
HOH
99
A
HOH
100
4
HOH
HOH
100
A
HOH
101
4
HOH
HOH
101
A
HOH
102
4
HOH
HOH
102
A
HOH
103
4
HOH
HOH
103
A
HOH
104
4
HOH
HOH
104
A
HOH
106
4
HOH
HOH
106
A
HOH
107
4
HOH
HOH
107
A
HOH
108
4
HOH
HOH
108
A
HOH
109
4
HOH
HOH
109
A
HOH
110
4
HOH
HOH
110
A
HOH
111
4
HOH
HOH
111
A
HOH
112
4
HOH
HOH
112
A
HOH
113
4
HOH
HOH
113
A
HOH
114
4
HOH
HOH
114
A
HOH
115
4
HOH
HOH
115
A
HOH
116
4
HOH
HOH
116
A
HOH
117
4
HOH
HOH
117
A
HOH
147
4
HOH
HOH
147
A
HOH
149
4
HOH
HOH
149
A
HOH
150
4
HOH
HOH
150
A
HOH
151
4
HOH
HOH
151
A
HOH
152
4
HOH
HOH
152
A
HOH
2
4
HOH
HOH
2
B
HOH
3
4
HOH
HOH
3
B
HOH
5
4
HOH
HOH
5
B
HOH
8
4
HOH
HOH
8
B
HOH
11
4
HOH
HOH
11
B
HOH
13
4
HOH
HOH
13
B
HOH
14
4
HOH
HOH
14
B
HOH
15
4
HOH
HOH
15
B
HOH
16
4
HOH
HOH
16
B
HOH
18
4
HOH
HOH
18
B
HOH
21
4
HOH
HOH
21
B
HOH
22
4
HOH
HOH
22
B
HOH
24
4
HOH
HOH
24
B
HOH
27
4
HOH
HOH
27
B
HOH
28
4
HOH
HOH
28
B
HOH
30
4
HOH
HOH
30
B
HOH
34
4
HOH
HOH
34
B
HOH
36
4
HOH
HOH
36
B
HOH
38
4
HOH
HOH
38
B
HOH
40
4
HOH
HOH
40
B
HOH
41
4
HOH
HOH
41
B
HOH
42
4
HOH
HOH
42
B
HOH
47
4
HOH
HOH
47
B
HOH
48
4
HOH
HOH
48
B
HOH
49
4
HOH
HOH
49
B
HOH
50
4
HOH
HOH
50
B
HOH
51
4
HOH
HOH
51
B
HOH
54
4
HOH
HOH
54
B
HOH
56
4
HOH
HOH
56
B
HOH
57
4
HOH
HOH
57
B
HOH
58
4
HOH
HOH
58
B
HOH
60
4
HOH
HOH
60
B
HOH
61
4
HOH
HOH
61
B
HOH
62
4
HOH
HOH
62
B
HOH
63
4
HOH
HOH
63
B
HOH
65
4
HOH
HOH
65
B
HOH
66
4
HOH
HOH
66
B
HOH
72
4
HOH
HOH
72
B
HOH
73
4
HOH
HOH
73
B
HOH
74
4
HOH
HOH
74
B
HOH
75
4
HOH
HOH
75
B
HOH
76
4
HOH
HOH
76
B
HOH
77
4
HOH
HOH
77
B
HOH
78
4
HOH
HOH
78
B
HOH
79
4
HOH
HOH
79
B
HOH
80
4
HOH
HOH
80
B
HOH
81
4
HOH
HOH
81
B
HOH
82
4
HOH
HOH
82
B
HOH
83
4
HOH
HOH
83
B
HOH
88
4
HOH
HOH
88
B
HOH
89
4
HOH
HOH
89
B
HOH
94
4
HOH
HOH
94
B
HOH
95
4
HOH
HOH
95
B
HOH
118
4
HOH
HOH
118
B
HOH
119
4
HOH
HOH
119
B
HOH
120
4
HOH
HOH
120
B
HOH
121
4
HOH
HOH
121
B
HOH
123
4
HOH
HOH
123
B
HOH
124
4
HOH
HOH
124
B
HOH
125
4
HOH
HOH
125
B
HOH
126
4
HOH
HOH
126
B
HOH
128
4
HOH
HOH
128
B
HOH
129
4
HOH
HOH
129
B
HOH
130
4
HOH
HOH
130
B
HOH
131
4
HOH
HOH
131
B
HOH
132
4
HOH
HOH
132
B
HOH
133
4
HOH
HOH
133
B
HOH
134
4
HOH
HOH
134
B
HOH
135
4
HOH
HOH
135
B
HOH
136
4
HOH
HOH
136
B
HOH
137
4
HOH
HOH
137
B
HOH
138
4
HOH
HOH
138
B
HOH
139
4
HOH
HOH
139
B
HOH
140
4
HOH
HOH
140
B
HOH
141
4
HOH
HOH
141
B
HOH
142
4
HOH
HOH
142
B
HOH
143
4
HOH
HOH
143
B
HOH
144
4
HOH
HOH
144
B
HOH
145
4
HOH
HOH
145
B
HOH
146
4
HOH
HOH
146
B
HOH
154
4
HOH
HOH
154
B
HOH
105
4
HOH
HOH
105
C
HOH
148
4
HOH
HOH
148
C
HOH
153
4
HOH
HOH
153
C
HOH
7
4
HOH
HOH
7
D
HOH
52
4
HOH
HOH
52
D
HOH
64
4
HOH
HOH
64
D
HOH
122
4
HOH
HOH
122
D
HOH
127
4
HOH
HOH
127
D
HOH
6
4
HOH
HOH
603
D
n
1
286
A
SER
287
n
2
SER
287
A
ARG
288
n
3
ARG
288
A
LEU
289
n
4
LEU
289
A
ALA
290
n
5
ALA
290
A
LEU
291
n
6
LEU
291
A
GLU
292
n
7
GLU
292
A
ALA
293
n
8
ALA
293
A
ASP
294
n
9
ASP
294
A
LEU
295
n
10
LEU
295
A
ARG
296
n
11
ARG
296
A
GLY
297
n
12
GLY
297
A
ALA
298
n
13
ALA
298
A
ILE
299
n
14
ILE
299
A
GLY
300
n
15
GLY
300
A
ARG
301
n
16
ARG
301
A
GLY
302
n
17
GLY
302
A
GLU
303
n
18
GLU
303
A
ILE
304
n
19
ILE
304
A
THR
305
n
20
THR
305
A
PRO
306
n
21
PRO
306
A
TYR
307
n
22
TYR
307
A
PHE
308
n
23
PHE
308
A
GLN
309
n
24
GLN
309
A
PRO
310
n
25
PRO
310
A
ILE
311
n
26
ILE
311
A
VAL
312
n
27
VAL
312
A
ARG
313
n
28
ARG
313
A
LEU
314
n
29
LEU
314
A
SER
315
n
30
SER
315
A
THR
316
n
31
THR
316
A
GLY
317
n
32
GLY
317
A
ALA
318
n
33
ALA
318
A
LEU
319
n
34
LEU
319
A
SER
320
n
35
SER
320
A
GLY
321
n
36
GLY
321
A
PHE
322
n
37
PHE
322
A
GLU
323
n
38
GLU
323
A
ALA
324
n
39
ALA
324
A
LEU
325
n
40
LEU
325
A
ALA
326
n
41
ALA
326
A
ARG
327
n
42
ARG
327
A
TRP
328
n
43
TRP
328
A
ILE
329
n
44
ILE
329
A
HIS
330
n
45
HIS
330
A
PRO
331
n
46
PRO
331
A
ARG
332
n
47
ARG
332
A
ARG
333
n
48
ARG
333
A
GLY
334
n
49
GLY
334
A
MSE
335
n
50
MSE
335
A
LEU
336
n
51
LEU
336
A
PRO
337
n
52
PRO
337
A
PRO
338
n
53
PRO
338
A
ASP
339
n
54
ASP
339
A
GLU
340
n
55
GLU
340
A
PHE
341
n
56
PHE
341
A
LEU
342
n
57
LEU
342
A
PRO
343
n
58
PRO
343
A
LEU
344
n
59
LEU
344
A
ILE
345
n
60
ILE
345
A
GLU
346
n
61
GLU
346
A
GLU
347
n
62
GLU
347
A
MSE
348
n
63
MSE
348
A
GLY
349
n
64
GLY
349
A
LEU
350
n
65
LEU
350
A
MSE
351
n
66
MSE
351
A
SER
352
n
67
SER
352
A
GLU
353
n
68
GLU
353
A
LEU
354
n
69
LEU
354
A
GLY
355
n
70
GLY
355
A
ALA
356
n
71
ALA
356
A
HIS
357
n
72
HIS
357
A
MSE
358
n
73
MSE
358
A
MSE
359
n
74
MSE
359
A
HIS
360
n
75
HIS
360
A
ALA
361
n
76
ALA
361
A
ALA
362
n
77
ALA
362
A
ALA
363
n
78
ALA
363
A
GLN
364
n
79
GLN
364
A
GLN
365
n
80
GLN
365
A
LEU
366
n
81
LEU
366
A
SER
367
n
82
SER
367
A
THR
368
n
83
THR
368
A
TRP
369
n
84
TRP
369
A
ARG
370
n
85
ARG
370
A
ALA
371
n
86
ALA
371
A
ALA
372
n
87
ALA
372
A
HIS
373
n
88
HIS
373
A
PRO
374
n
89
PRO
374
A
ALA
375
n
90
ALA
375
A
MSE
376
n
91
MSE
376
A
GLY
377
n
92
GLY
377
A
ASN
378
n
93
ASN
378
A
LEU
379
n
94
LEU
379
A
THR
380
n
95
THR
380
A
VAL
381
n
96
VAL
381
A
SER
382
n
97
SER
382
A
VAL
383
n
98
VAL
383
A
ASN
384
n
99
ASN
384
A
LEU
385
n
100
LEU
385
A
SER
386
n
101
SER
386
A
THR
387
n
102
THR
387
A
GLY
388
n
103
GLY
388
A
GLU
389
n
104
GLU
389
A
ILE
390
n
105
ILE
390
A
ASP
391
n
106
ASP
391
A
ARG
392
n
107
ARG
392
A
PRO
393
n
108
PRO
393
A
GLY
394
n
109
GLY
394
A
LEU
395
n
110
LEU
395
A
VAL
396
n
111
VAL
396
A
ALA
397
n
112
ALA
397
A
ASP
398
n
113
ASP
398
A
VAL
399
n
114
VAL
399
A
ALA
400
n
115
ALA
400
A
GLU
401
n
116
GLU
401
A
THR
402
n
117
THR
402
A
LEU
403
n
118
LEU
403
A
ARG
404
n
119
ARG
404
A
VAL
405
n
120
VAL
405
A
ASN
406
n
121
ASN
406
A
ARG
407
n
122
ARG
407
A
LEU
408
n
123
LEU
408
A
PRO
409
n
124
PRO
409
A
ARG
410
n
125
ARG
410
A
GLY
411
n
126
GLY
411
A
ALA
412
n
127
ALA
412
A
LEU
413
n
128
LEU
413
A
LYS
414
n
129
LYS
414
A
LEU
415
n
130
LEU
415
A
GLU
416
n
131
GLU
416
A
VAL
417
n
132
VAL
417
A
THR
418
n
133
THR
418
A
GLU
419
n
134
GLU
419
A
SER
420
n
135
SER
420
A
ASP
421
n
136
ASP
421
A
ILE
422
n
137
ILE
422
A
MSE
423
n
138
MSE
423
A
ARG
424
n
139
ARG
424
A
ASP
425
n
140
ASP
425
A
PRO
426
n
141
PRO
426
A
GLU
427
n
142
GLU
427
A
ARG
428
n
143
ARG
428
A
ALA
429
n
144
ALA
429
A
ALA
430
n
145
ALA
430
A
VAL
431
n
146
VAL
431
A
ILE
432
n
147
ILE
432
A
LEU
433
n
148
LEU
433
A
LYS
434
n
149
LYS
434
A
THR
435
n
150
THR
435
A
LEU
436
n
151
LEU
436
A
ARG
437
n
152
ARG
437
A
ASP
438
n
153
ASP
438
A
ALA
439
n
154
ALA
439
A
GLY
440
n
155
GLY
440
A
ALA
441
n
156
ALA
441
A
GLY
442
n
157
GLY
442
A
LEU
443
n
158
LEU
443
A
ALA
444
n
159
ALA
444
A
LEU
445
n
160
LEU
445
A
ASP
446
n
161
ASP
446
A
ASP
447
n
162
ASP
447
A
PHE
448
n
163
PHE
448
A
GLY
449
n
164
GLY
449
A
THR
450
n
165
THR
450
A
GLY
451
n
166
GLY
451
A
PHE
452
n
167
PHE
452
A
SER
453
n
168
SER
453
A
SER
454
n
169
SER
454
A
LEU
455
n
170
LEU
455
A
SER
456
n
171
SER
456
A
TYR
457
n
172
TYR
457
A
LEU
458
n
173
LEU
458
A
THR
459
n
174
THR
459
A
ARG
460
n
175
ARG
460
A
LEU
461
n
176
LEU
461
A
PRO
462
n
177
PRO
462
A
PHE
463
n
178
PHE
463
A
ASP
464
n
179
ASP
464
A
THR
465
n
180
THR
465
A
LEU
466
n
181
LEU
466
A
LYS
467
n
182
LYS
467
A
ILE
468
n
183
ILE
468
A
ASP
469
n
184
ASP
469
A
ARG
470
n
185
ARG
470
A
TYR
471
n
186
TYR
471
A
PHE
472
n
187
PHE
472
A
VAL
473
n
188
VAL
473
A
ARG
474
n
189
ARG
474
A
THR
475
n
190
THR
475
A
MSE
476
n
191
MSE
476
A
GLY
477
n
192
GLY
477
A
ASN
478
n
193
ASN
478
A
ASN
479
n
194
ASN
479
A
ALA
480
n
195
ALA
480
A
GLY
481
n
196
GLY
481
A
SER
482
n
197
SER
482
A
ALA
483
n
198
ALA
483
A
LYS
484
n
199
LYS
484
A
ILE
485
n
200
ILE
485
A
VAL
486
n
201
VAL
486
A
ARG
487
n
202
ARG
487
A
SER
488
n
203
SER
488
A
VAL
489
n
204
VAL
489
A
VAL
490
n
205
VAL
490
A
LYS
491
n
206
LYS
491
A
LEU
492
n
207
LEU
492
A
GLY
493
n
208
GLY
493
A
GLN
494
n
209
GLN
494
A
ASP
495
n
210
ASP
495
A
LEU
496
n
211
LEU
496
A
ASP
497
n
212
ASP
497
A
LEU
498
n
213
LEU
498
A
GLU
499
n
214
GLU
499
A
VAL
500
n
215
VAL
500
A
VAL
501
n
216
VAL
501
A
ALA
502
n
217
ALA
502
A
GLU
503
n
218
GLU
503
A
GLY
504
n
219
GLY
504
A
VAL
505
n
220
VAL
505
A
GLU
506
n
221
GLU
506
A
ASN
507
n
222
ASN
507
A
ALA
508
n
223
ALA
508
A
GLU
509
n
224
GLU
509
A
MSE
510
n
225
MSE
510
A
ALA
511
n
226
ALA
511
A
HIS
512
n
227
HIS
512
A
ALA
513
n
228
ALA
513
A
LEU
514
n
229
LEU
514
A
GLN
515
n
230
GLN
515
A
SER
516
n
231
SER
516
A
LEU
517
n
232
LEU
517
A
GLY
518
n
233
GLY
518
A
CYS
519
n
234
CYS
519
A
ASP
520
n
235
ASP
520
A
TYR
521
n
236
TYR
521
A
GLY
522
n
237
GLY
522
A
GLN
523
n
238
GLN
523
A
GLY
524
n
239
GLY
524
A
PHE
525
n
240
PHE
525
A
GLY
526
n
241
GLY
526
A
TYR
527
n
242
TYR
527
A
ALA
528
n
243
ALA
528
A
PRO
529
n
244
PRO
529
A
ALA
530
n
245
ALA
530
A
LEU
531
n
246
LEU
531
A
SER
532
n
247
SER
532
A
PRO
533
n
248
PRO
533
A
GLN
534
n
249
GLN
534
A
GLU
535
n
250
GLU
535
A
ALA
536
n
251
ALA
536
A
GLU
537
n
252
GLU
537
A
VAL
538
n
253
VAL
538
A
TYR
539
n
254
TYR
539
A
LEU
540
n
255
LEU
540
A
ASN
541
n
256
ASN
541
A
GLU
542
n
257
GLU
542
A
ALA
543
n
258
ALA
543
A
TYR
544
n
259
TYR
544
A
VAL
545
n
260
VAL
545
A
ASP
546
n
261
ASP
546
A
LEU
286
n
1
LEU
286
B
SER
287
n
2
SER
287
B
ARG
288
n
3
ARG
288
B
LEU
289
n
4
LEU
289
B
ALA
290
n
5
ALA
290
B
LEU
291
n
6
LEU
291
B
GLU
292
n
7
GLU
292
B
ALA
293
n
8
ALA
293
B
ASP
294
n
9
ASP
294
B
LEU
295
n
10
LEU
295
B
ARG
296
n
11
ARG
296
B
GLY
297
n
12
GLY
297
B
ALA
298
n
13
ALA
298
B
ILE
299
n
14
ILE
299
B
GLY
300
n
15
GLY
300
B
ARG
301
n
16
ARG
301
B
GLY
302
n
17
GLY
302
B
GLU
303
n
18
GLU
303
B
ILE
304
n
19
ILE
304
B
THR
305
n
20
THR
305
B
PRO
306
n
21
PRO
306
B
TYR
307
n
22
TYR
307
B
PHE
308
n
23
PHE
308
B
GLN
309
n
24
GLN
309
B
PRO
310
n
25
PRO
310
B
ILE
311
n
26
ILE
311
B
VAL
312
n
27
VAL
312
B
ARG
313
n
28
ARG
313
B
LEU
314
n
29
LEU
314
B
SER
315
n
30
SER
315
B
THR
316
n
31
THR
316
B
GLY
317
n
32
GLY
317
B
ALA
318
n
33
ALA
318
B
LEU
319
n
34
LEU
319
B
SER
320
n
35
SER
320
B
GLY
321
n
36
GLY
321
B
PHE
322
n
37
PHE
322
B
GLU
323
n
38
GLU
323
B
ALA
324
n
39
ALA
324
B
LEU
325
n
40
LEU
325
B
ALA
326
n
41
ALA
326
B
ARG
327
n
42
ARG
327
B
TRP
328
n
43
TRP
328
B
ILE
329
n
44
ILE
329
B
HIS
330
n
45
HIS
330
B
PRO
331
n
46
PRO
331
B
ARG
332
n
47
ARG
332
B
ARG
333
n
48
ARG
333
B
GLY
334
n
49
GLY
334
B
MSE
335
n
50
MSE
335
B
LEU
336
n
51
LEU
336
B
PRO
337
n
52
PRO
337
B
PRO
338
n
53
PRO
338
B
ASP
339
n
54
ASP
339
B
GLU
340
n
55
GLU
340
B
PHE
341
n
56
PHE
341
B
LEU
342
n
57
LEU
342
B
PRO
343
n
58
PRO
343
B
LEU
344
n
59
LEU
344
B
ILE
345
n
60
ILE
345
B
GLU
346
n
61
GLU
346
B
GLU
347
n
62
GLU
347
B
MSE
348
n
63
MSE
348
B
GLY
349
n
64
GLY
349
B
LEU
350
n
65
LEU
350
B
MSE
351
n
66
MSE
351
B
SER
352
n
67
SER
352
B
GLU
353
n
68
GLU
353
B
LEU
354
n
69
LEU
354
B
GLY
355
n
70
GLY
355
B
ALA
356
n
71
ALA
356
B
HIS
357
n
72
HIS
357
B
MSE
358
n
73
MSE
358
B
MSE
359
n
74
MSE
359
B
HIS
360
n
75
HIS
360
B
ALA
361
n
76
ALA
361
B
ALA
362
n
77
ALA
362
B
ALA
363
n
78
ALA
363
B
GLN
364
n
79
GLN
364
B
GLN
365
n
80
GLN
365
B
LEU
366
n
81
LEU
366
B
SER
367
n
82
SER
367
B
THR
368
n
83
THR
368
B
TRP
369
n
84
TRP
369
B
ARG
370
n
85
ARG
370
B
ALA
371
n
86
ALA
371
B
ALA
372
n
87
ALA
372
B
HIS
373
n
88
HIS
373
B
PRO
374
n
89
PRO
374
B
ALA
375
n
90
ALA
375
B
MSE
376
n
91
MSE
376
B
GLY
377
n
92
GLY
377
B
ASN
378
n
93
ASN
378
B
LEU
379
n
94
LEU
379
B
THR
380
n
95
THR
380
B
VAL
381
n
96
VAL
381
B
SER
382
n
97
SER
382
B
VAL
383
n
98
VAL
383
B
ASN
384
n
99
ASN
384
B
LEU
385
n
100
LEU
385
B
SER
386
n
101
SER
386
B
THR
387
n
102
THR
387
B
GLY
388
n
103
GLY
388
B
GLU
389
n
104
GLU
389
B
ILE
390
n
105
ILE
390
B
ASP
391
n
106
ASP
391
B
ARG
392
n
107
ARG
392
B
PRO
393
n
108
PRO
393
B
GLY
394
n
109
GLY
394
B
LEU
395
n
110
LEU
395
B
VAL
396
n
111
VAL
396
B
ALA
397
n
112
ALA
397
B
ASP
398
n
113
ASP
398
B
VAL
399
n
114
VAL
399
B
ALA
400
n
115
ALA
400
B
GLU
401
n
116
GLU
401
B
THR
402
n
117
THR
402
B
LEU
403
n
118
LEU
403
B
ARG
404
n
119
ARG
404
B
VAL
405
n
120
VAL
405
B
ASN
406
n
121
ASN
406
B
ARG
407
n
122
ARG
407
B
LEU
408
n
123
LEU
408
B
PRO
409
n
124
PRO
409
B
ARG
410
n
125
ARG
410
B
GLY
411
n
126
GLY
411
B
ALA
412
n
127
ALA
412
B
LEU
413
n
128
LEU
413
B
LYS
414
n
129
LYS
414
B
LEU
415
n
130
LEU
415
B
GLU
416
n
131
GLU
416
B
VAL
417
n
132
VAL
417
B
THR
418
n
133
THR
418
B
GLU
419
n
134
GLU
419
B
SER
420
n
135
SER
420
B
ASP
421
n
136
ASP
421
B
ILE
422
n
137
ILE
422
B
MSE
423
n
138
MSE
423
B
ARG
424
n
139
ARG
424
B
ASP
425
n
140
ASP
425
B
PRO
426
n
141
PRO
426
B
GLU
427
n
142
GLU
427
B
ARG
428
n
143
ARG
428
B
ALA
429
n
144
ALA
429
B
ALA
430
n
145
ALA
430
B
VAL
431
n
146
VAL
431
B
ILE
432
n
147
ILE
432
B
LEU
433
n
148
LEU
433
B
LYS
434
n
149
LYS
434
B
THR
435
n
150
THR
435
B
LEU
436
n
151
LEU
436
B
ARG
437
n
152
ARG
437
B
ASP
438
n
153
ASP
438
B
ALA
439
n
154
ALA
439
B
GLY
440
n
155
GLY
440
B
ALA
441
n
156
ALA
441
B
GLY
442
n
157
GLY
442
B
LEU
443
n
158
LEU
443
B
ALA
444
n
159
ALA
444
B
LEU
445
n
160
LEU
445
B
ASP
446
n
161
ASP
446
B
ASP
447
n
162
ASP
447
B
PHE
448
n
163
PHE
448
B
GLY
449
n
164
GLY
449
B
THR
450
n
165
THR
450
B
ALA
451
n
166
GLY
451
B
PHE
452
n
167
PHE
452
B
SER
453
n
168
SER
453
B
SER
454
n
169
SER
454
B
LEU
455
n
170
LEU
455
B
SER
456
n
171
SER
456
B
TYR
457
n
172
TYR
457
B
LEU
458
n
173
LEU
458
B
THR
459
n
174
THR
459
B
ARG
460
n
175
ARG
460
B
LEU
461
n
176
LEU
461
B
PRO
462
n
177
PRO
462
B
PHE
463
n
178
PHE
463
B
ASP
464
n
179
ASP
464
B
THR
465
n
180
THR
465
B
LEU
466
n
181
LEU
466
B
LYS
467
n
182
LYS
467
B
ILE
468
n
183
ILE
468
B
ASP
469
n
184
ASP
469
B
ARG
470
n
185
ARG
470
B
TYR
471
n
186
TYR
471
B
PHE
472
n
187
PHE
472
B
VAL
473
n
188
VAL
473
B
ARG
474
n
189
ARG
474
B
THR
475
n
190
THR
475
B
MSE
476
n
191
MSE
476
B
GLY
477
n
192
GLY
477
B
ASN
478
n
193
ASN
478
B
ASN
479
n
194
ASN
479
B
ALA
480
n
195
ALA
480
B
GLY
481
n
196
GLY
481
B
SER
482
n
197
SER
482
B
ALA
483
n
198
ALA
483
B
LYS
484
n
199
LYS
484
B
ILE
485
n
200
ILE
485
B
VAL
486
n
201
VAL
486
B
ARG
487
n
202
ARG
487
B
SER
488
n
203
SER
488
B
VAL
489
n
204
VAL
489
B
VAL
490
n
205
VAL
490
B
LYS
491
n
206
LYS
491
B
LEU
492
n
207
LEU
492
B
GLY
493
n
208
GLY
493
B
GLN
494
n
209
GLN
494
B
ASP
495
n
210
ASP
495
B
LEU
496
n
211
LEU
496
B
ASP
497
n
212
ASP
497
B
LEU
498
n
213
LEU
498
B
GLU
499
n
214
GLU
499
B
VAL
500
n
215
VAL
500
B
VAL
501
n
216
VAL
501
B
ALA
502
n
217
ALA
502
B
GLU
503
n
218
GLU
503
B
GLY
504
n
219
GLY
504
B
VAL
505
n
220
VAL
505
B
GLU
506
n
221
GLU
506
B
ASN
507
n
222
ASN
507
B
ALA
508
n
223
ALA
508
B
GLU
509
n
224
GLU
509
B
MSE
510
n
225
MSE
510
B
ALA
511
n
226
ALA
511
B
HIS
512
n
227
HIS
512
B
ALA
513
n
228
ALA
513
B
LEU
514
n
229
LEU
514
B
GLN
515
n
230
GLN
515
B
SER
516
n
231
SER
516
B
LEU
517
n
232
LEU
517
B
GLY
518
n
233
GLY
518
B
CYS
519
n
234
CYS
519
B
ASP
520
n
235
ASP
520
B
TYR
521
n
236
TYR
521
B
GLY
522
n
237
GLY
522
B
GLN
523
n
238
GLN
523
B
GLY
524
n
239
GLY
524
B
PHE
525
n
240
PHE
525
B
GLY
526
n
241
GLY
526
B
TYR
527
n
242
TYR
527
B
ALA
528
n
243
ALA
528
B
PRO
529
n
244
PRO
529
B
ALA
530
n
245
ALA
530
B
LEU
531
n
246
LEU
531
B
SER
532
n
247
SER
532
B
PRO
533
n
248
PRO
533
B
GLN
534
n
249
GLN
534
B
GLU
535
n
250
GLU
535
B
ALA
536
n
251
ALA
536
B
GLU
537
n
252
GLU
537
B
VAL
538
n
253
VAL
538
B
TYR
539
n
254
TYR
539
B
LEU
540
n
255
LEU
540
B
n
256
541
B
n
257
542
B
n
258
543
B
n
259
544
B
n
260
545
B
n
261
546
B
G
601
n
1
G
601
C
G
602
n
2
G
602
C
G
601
n
1
G
601
D
G
602
n
2
G
602
D
2.2893
-0.1977
0.6906
1.9342
-0.3551
2.1051
0.1548
0.1260
-0.5034
-0.0283
-0.0991
0.1462
0.1666
-0.1458
-0.0557
0.0335
0.0132
-0.0274
0.0868
-0.0258
0.1320
refined
17.1738
-4.6857
50.9360
X-RAY DIFFRACTION
1.9195
-0.0777
-0.4125
0.8215
0.0364
2.1283
-0.0932
0.0632
-0.1670
0.0166
0.0249
-0.1015
0.2141
0.3931
0.0683
0.0447
0.0487
-0.0077
0.1261
-0.0026
0.0524
refined
33.4510
-2.2965
56.2099
X-RAY DIFFRACTION
2.2993
-0.8169
1.3551
1.0262
-0.7760
3.5203
-0.2166
-0.3471
0.0405
0.2587
0.1515
0.0342
-0.4041
-0.2578
0.0651
0.1205
0.0638
-0.0108
0.0966
-0.0092
0.0151
refined
21.2627
7.8710
67.1796
X-RAY DIFFRACTION
1.0738
-0.0911
0.6148
2.1727
-0.3667
1.8196
0.0638
-0.0795
-0.1617
-0.0164
-0.0656
-0.1993
0.2175
0.1223
0.0018
0.0395
-0.0076
-0.0137
0.0809
0.0342
0.0774
refined
46.7783
-9.8260
104.3591
X-RAY DIFFRACTION
1.2713
0.4595
-0.4471
1.0027
-0.6172
1.7581
-0.0090
-0.1271
0.0872
0.0104
0.0937
0.1267
0.0987
-0.3162
-0.0847
0.0172
-0.0208
-0.0137
0.1275
0.0304
0.0517
refined
30.3656
-2.6934
103.1087
X-RAY DIFFRACTION
1.3755
-0.0792
0.6191
1.1359
-0.7958
2.1828
-0.0581
0.0815
0.1551
-0.1828
-0.0223
-0.1193
-0.0313
0.0447
0.0804
0.0544
-0.0159
0.0014
0.0594
0.0368
0.0597
refined
40.3442
5.9184
89.3510
X-RAY DIFFRACTION
A
287
A
375
X-RAY DIFFRACTION
1
A
376
A
443
X-RAY DIFFRACTION
2
A
444
A
546
X-RAY DIFFRACTION
3
B
286
B
359
X-RAY DIFFRACTION
4
B
360
B
441
X-RAY DIFFRACTION
5
B
442
B
540
X-RAY DIFFRACTION
6
author_and_software_defined_assembly
PISA
4
tetrameric
4820
-92
21990
A
GLU
323
A
OE2
GLU
38
1_555
A
MG
2
E
MG
MG
1_555
A
ASN
384
A
OD1
ASN
99
1_555
86.2
A
GLU
323
A
OE2
GLU
38
1_555
A
MG
2
E
MG
MG
1_555
A
GLU
416
A
OE1
GLU
131
1_555
85.3
A
ASN
384
A
OD1
ASN
99
1_555
A
MG
2
E
MG
MG
1_555
A
GLU
416
A
OE1
GLU
131
1_555
81.9
A
GLU
323
A
OE2
GLU
38
1_555
A
MG
2
E
MG
MG
1_555
A
ASP
446
A
OD2
ASP
161
1_555
161.2
A
ASN
384
A
OD1
ASN
99
1_555
A
MG
2
E
MG
MG
1_555
A
ASP
446
A
OD2
ASP
161
1_555
88.7
A
GLU
416
A
OE1
GLU
131
1_555
A
MG
2
E
MG
MG
1_555
A
ASP
446
A
OD2
ASP
161
1_555
76.1
A
GLU
323
A
OE2
GLU
38
1_555
A
MG
2
E
MG
MG
1_555
C
G
601
C
OP2
G
1
1_555
95.1
A
ASN
384
A
OD1
ASN
99
1_555
A
MG
2
E
MG
MG
1_555
C
G
601
C
OP2
G
1
1_555
91.8
A
GLU
416
A
OE1
GLU
131
1_555
A
MG
2
E
MG
MG
1_555
C
G
601
C
OP2
G
1
1_555
173.6
A
ASP
446
A
OD2
ASP
161
1_555
A
MG
2
E
MG
MG
1_555
C
G
601
C
OP2
G
1
1_555
103.1
A
ASP
446
A
OD1
ASP
161
1_555
A
MG
3
F
MG
MG
1_555
A
ASP
447
A
OD1
ASP
162
1_555
84.7
A
ASP
446
A
OD1
ASP
161
1_555
A
MG
3
F
MG
MG
1_555
A
GLU
503
A
OE1
GLU
218
1_555
93.5
A
ASP
447
A
OD1
ASP
162
1_555
A
MG
3
F
MG
MG
1_555
A
GLU
503
A
OE1
GLU
218
1_555
112.8
A
ASP
446
A
OD1
ASP
161
1_555
A
MG
3
F
MG
MG
1_555
A
GLU
503
A
OE2
GLU
218
1_555
105.4
A
ASP
447
A
OD1
ASP
162
1_555
A
MG
3
F
MG
MG
1_555
A
GLU
503
A
OE2
GLU
218
1_555
167.4
A
GLU
503
A
OE1
GLU
218
1_555
A
MG
3
F
MG
MG
1_555
A
GLU
503
A
OE2
GLU
218
1_555
60.0
A
ASP
446
A
OD1
ASP
161
1_555
A
MG
3
F
MG
MG
1_555
C
G
601
C
OP3
G
1
1_555
100.6
A
ASP
447
A
OD1
ASP
162
1_555
A
MG
3
F
MG
MG
1_555
C
G
601
C
OP3
G
1
1_555
105.6
A
GLU
503
A
OE1
GLU
218
1_555
A
MG
3
F
MG
MG
1_555
C
G
601
C
OP3
G
1
1_555
140.1
A
GLU
503
A
OE2
GLU
218
1_555
A
MG
3
F
MG
MG
1_555
C
G
601
C
OP3
G
1
1_555
80.1
A
HOH
149
K
O
HOH
1_555
C
MG
5
I
MG
MG
1_555
A
HOH
150
K
O
HOH
1_555
83.9
A
HOH
149
K
O
HOH
1_555
C
MG
5
I
MG
MG
1_555
A
HOH
151
K
O
HOH
1_555
92.3
A
HOH
150
K
O
HOH
1_555
C
MG
5
I
MG
MG
1_555
A
HOH
151
K
O
HOH
1_555
98.8
A
HOH
149
K
O
HOH
1_555
C
MG
5
I
MG
MG
1_555
C
G
601
C
OP1
G
1
1_555
168.2
A
HOH
150
K
O
HOH
1_555
C
MG
5
I
MG
MG
1_555
C
G
601
C
OP1
G
1
1_555
96.7
A
HOH
151
K
O
HOH
1_555
C
MG
5
I
MG
MG
1_555
C
G
601
C
OP1
G
1
1_555
75.9
A
HOH
149
K
O
HOH
1_555
C
MG
5
I
MG
MG
1_555
C
G
602
C
O3'
G
2
1_555
105.7
A
HOH
150
K
O
HOH
1_555
C
MG
5
I
MG
MG
1_555
C
G
602
C
O3'
G
2
1_555
167.2
A
HOH
151
K
O
HOH
1_555
C
MG
5
I
MG
MG
1_555
C
G
602
C
O3'
G
2
1_555
89.4
C
G
601
C
OP1
G
1
1_555
C
MG
5
I
MG
MG
1_555
C
G
602
C
O3'
G
2
1_555
75.7
A
HOH
149
K
O
HOH
1_555
C
MG
5
I
MG
MG
1_555
C
G
602
C
O2'
G
2
1_555
103.3
A
HOH
150
K
O
HOH
1_555
C
MG
5
I
MG
MG
1_555
C
G
602
C
O2'
G
2
1_555
96.0
A
HOH
151
K
O
HOH
1_555
C
MG
5
I
MG
MG
1_555
C
G
602
C
O2'
G
2
1_555
159.5
C
G
601
C
OP1
G
1
1_555
C
MG
5
I
MG
MG
1_555
C
G
602
C
O2'
G
2
1_555
88.3
C
G
602
C
O3'
G
2
1_555
C
MG
5
I
MG
MG
1_555
C
G
602
C
O2'
G
2
1_555
73.8
B
HOH
2
L
O
HOH
1_555
B
MG
1
G
MG
MG
1_555
B
GLU
323
B
OE2
GLU
38
1_555
83.9
B
HOH
2
L
O
HOH
1_555
B
MG
1
G
MG
MG
1_555
B
ASN
384
B
OD1
ASN
99
1_555
161.2
B
GLU
323
B
OE2
GLU
38
1_555
B
MG
1
G
MG
MG
1_555
B
ASN
384
B
OD1
ASN
99
1_555
84.2
B
HOH
2
L
O
HOH
1_555
B
MG
1
G
MG
MG
1_555
B
GLU
416
B
OE2
GLU
131
1_555
81.9
B
GLU
323
B
OE2
GLU
38
1_555
B
MG
1
G
MG
MG
1_555
B
GLU
416
B
OE2
GLU
131
1_555
84.5
B
ASN
384
B
OD1
ASN
99
1_555
B
MG
1
G
MG
MG
1_555
B
GLU
416
B
OE2
GLU
131
1_555
82.5
B
HOH
2
L
O
HOH
1_555
B
MG
1
G
MG
MG
1_555
B
ASP
446
B
OD2
ASP
161
1_555
94.6
B
GLU
323
B
OE2
GLU
38
1_555
B
MG
1
G
MG
MG
1_555
B
ASP
446
B
OD2
ASP
161
1_555
164.3
B
ASN
384
B
OD1
ASN
99
1_555
B
MG
1
G
MG
MG
1_555
B
ASP
446
B
OD2
ASP
161
1_555
92.9
B
GLU
416
B
OE2
GLU
131
1_555
B
MG
1
G
MG
MG
1_555
B
ASP
446
B
OD2
ASP
161
1_555
79.9
B
HOH
2
L
O
HOH
1_555
B
MG
1
G
MG
MG
1_555
D
G
601
D
OP2
G
1
1_555
100.3
B
GLU
323
B
OE2
GLU
38
1_555
B
MG
1
G
MG
MG
1_555
D
G
601
D
OP2
G
1
1_555
99.9
B
ASN
384
B
OD1
ASN
99
1_555
B
MG
1
G
MG
MG
1_555
D
G
601
D
OP2
G
1
1_555
96.0
B
GLU
416
B
OE2
GLU
131
1_555
B
MG
1
G
MG
MG
1_555
D
G
601
D
OP2
G
1
1_555
175.3
B
ASP
446
B
OD2
ASP
161
1_555
B
MG
1
G
MG
MG
1_555
D
G
601
D
OP2
G
1
1_555
95.8
B
HOH
80
L
O
HOH
1_555
B
MG
4
H
MG
MG
1_555
B
ASP
446
B
OD1
ASP
161
1_555
158.1
B
HOH
80
L
O
HOH
1_555
B
MG
4
H
MG
MG
1_555
B
ASP
447
B
OD1
ASP
162
1_555
76.6
B
ASP
446
B
OD1
ASP
161
1_555
B
MG
4
H
MG
MG
1_555
B
ASP
447
B
OD1
ASP
162
1_555
89.9
B
HOH
80
L
O
HOH
1_555
B
MG
4
H
MG
MG
1_555
B
GLU
503
B
OE2
GLU
218
1_555
88.4
B
ASP
446
B
OD1
ASP
161
1_555
B
MG
4
H
MG
MG
1_555
B
GLU
503
B
OE2
GLU
218
1_555
100.9
B
ASP
447
B
OD1
ASP
162
1_555
B
MG
4
H
MG
MG
1_555
B
GLU
503
B
OE2
GLU
218
1_555
161.5
B
HOH
80
L
O
HOH
1_555
B
MG
4
H
MG
MG
1_555
B
GLU
503
B
OE1
GLU
218
1_555
85.4
B
ASP
446
B
OD1
ASP
161
1_555
B
MG
4
H
MG
MG
1_555
B
GLU
503
B
OE1
GLU
218
1_555
82.0
B
ASP
447
B
OD1
ASP
162
1_555
B
MG
4
H
MG
MG
1_555
B
GLU
503
B
OE1
GLU
218
1_555
106.7
B
GLU
503
B
OE2
GLU
218
1_555
B
MG
4
H
MG
MG
1_555
B
GLU
503
B
OE1
GLU
218
1_555
60.7
B
HOH
80
L
O
HOH
1_555
B
MG
4
H
MG
MG
1_555
D
G
601
D
OP3
G
1
1_555
97.3
B
ASP
446
B
OD1
ASP
161
1_555
B
MG
4
H
MG
MG
1_555
D
G
601
D
OP3
G
1
1_555
103.8
B
ASP
447
B
OD1
ASP
162
1_555
B
MG
4
H
MG
MG
1_555
D
G
601
D
OP3
G
1
1_555
111.6
B
GLU
503
B
OE2
GLU
218
1_555
B
MG
4
H
MG
MG
1_555
D
G
601
D
OP3
G
1
1_555
80.6
B
GLU
503
B
OE1
GLU
218
1_555
B
MG
4
H
MG
MG
1_555
D
G
601
D
OP3
G
1
1_555
141.2
B
HOH
65
L
O
HOH
1_555
D
MG
6
J
MG
MG
1_555
D
HOH
64
N
O
HOH
1_555
81.4
B
HOH
65
L
O
HOH
1_555
D
MG
6
J
MG
MG
1_555
D
G
601
D
OP1
G
1
1_555
105.5
D
HOH
64
N
O
HOH
1_555
D
MG
6
J
MG
MG
1_555
D
G
601
D
OP1
G
1
1_555
162.3
B
HOH
65
L
O
HOH
1_555
D
MG
6
J
MG
MG
1_555
D
G
602
D
O3'
G
2
1_555
153.1
D
HOH
64
N
O
HOH
1_555
D
MG
6
J
MG
MG
1_555
D
G
602
D
O3'
G
2
1_555
90.1
D
G
601
D
OP1
G
1
1_555
D
MG
6
J
MG
MG
1_555
D
G
602
D
O3'
G
2
1_555
76.4
B
HOH
65
L
O
HOH
1_555
D
MG
6
J
MG
MG
1_555
D
G
602
D
O2'
G
2
1_555
88.4
D
HOH
64
N
O
HOH
1_555
D
MG
6
J
MG
MG
1_555
D
G
602
D
O2'
G
2
1_555
69.4
D
G
601
D
OP1
G
1
1_555
D
MG
6
J
MG
MG
1_555
D
G
602
D
O2'
G
2
1_555
94.2
D
G
602
D
O3'
G
2
1_555
D
MG
6
J
MG
MG
1_555
D
G
602
D
O2'
G
2
1_555
64.7
A
MSE
335
SELENOMETHIONINE
A
MSE
50
MET
A
MSE
348
SELENOMETHIONINE
A
MSE
63
MET
A
MSE
351
SELENOMETHIONINE
A
MSE
66
MET
A
MSE
358
SELENOMETHIONINE
A
MSE
73
MET
A
MSE
359
SELENOMETHIONINE
A
MSE
74
MET
A
MSE
376
SELENOMETHIONINE
A
MSE
91
MET
A
MSE
423
SELENOMETHIONINE
A
MSE
138
MET
A
MSE
476
SELENOMETHIONINE
A
MSE
191
MET
A
MSE
510
SELENOMETHIONINE
A
MSE
225
MET
B
MSE
335
SELENOMETHIONINE
B
MSE
50
MET
B
MSE
348
SELENOMETHIONINE
B
MSE
63
MET
B
MSE
351
SELENOMETHIONINE
B
MSE
66
MET
B
MSE
358
SELENOMETHIONINE
B
MSE
73
MET
B
MSE
359
SELENOMETHIONINE
B
MSE
74
MET
B
MSE
376
SELENOMETHIONINE
B
MSE
91
MET
B
MSE
423
SELENOMETHIONINE
B
MSE
138
MET
B
MSE
476
SELENOMETHIONINE
B
MSE
191
MET
B
MSE
510
SELENOMETHIONINE
B
MSE
225
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
LEU
336
A
O
LEU
51
A
N
TRP
328
A
N
TRP
43
A
N
ALA
324
A
N
ALA
39
A
O
SER
382
A
O
SER
97
A
N
VAL
383
A
N
VAL
98
A
O
GLU
416
A
O
GLU
131
A
N
LEU
415
A
N
LEU
130
A
O
ALA
444
A
O
ALA
159
A
N
LEU
445
A
N
LEU
160
A
O
LYS
467
A
O
LYS
182
A
N
ILE
468
A
N
ILE
183
A
O
VAL
501
A
O
VAL
216
A
N
VAL
500
A
N
VAL
215
A
O
TYR
521
A
O
TYR
236
A
O
GLY
522
A
O
GLY
237
A
N
VAL
312
A
N
VAL
27
A
N
ILE
311
A
N
ILE
26
A
O
GLY
321
A
O
GLY
36
B
O
GLY
334
B
O
GLY
49
B
N
HIS
330
B
N
HIS
45
B
N
ALA
324
B
N
ALA
39
B
O
SER
382
B
O
SER
97
B
N
VAL
381
B
N
VAL
96
B
O
LYS
414
B
O
LYS
129
B
N
VAL
417
B
N
VAL
132
B
O
ASP
446
B
O
ASP
161
B
N
LEU
445
B
N
LEU
160
B
O
LYS
467
B
O
LYS
182
B
N
ILE
468
B
N
ILE
183
B
O
VAL
501
B
O
VAL
216
B
N
ALA
502
B
N
ALA
217
B
O
TYR
521
B
O
TYR
236
B
O
GLY
522
B
O
GLY
237
B
N
VAL
312
B
N
VAL
27
B
N
GLN
309
B
N
GLN
24
B
O
GLU
323
B
O
GLU
38
1
A
LEU
286
A
LEU
1
1
Y
1
B
ASN
541
B
ASN
256
1
Y
1
B
GLU
542
B
GLU
257
1
Y
1
B
ALA
543
B
ALA
258
1
Y
1
B
TYR
544
B
TYR
259
1
Y
1
B
VAL
545
B
VAL
260
1
Y
1
B
ASP
546
B
ASP
261
1
Y
1
10.50
1.50
119.30
129.80
A
A
A
C
N
CA
ARG
PRO
PRO
392
393
393
B
B
Y
1
-8.86
0.90
105.70
96.84
D
D
D
O5'
P
OP1
G
G
G
601
601
601
N
1
C
C
P
OP3
G
G
601
601
-0.117
0.012
1.607
1.490
N
1
D
D
P
OP3
G
G
601
601
-0.113
0.012
1.607
1.494
N
1
A
PRO
393
B
-64.41
2.78
1
A
PRO
462
-79.39
42.04
1
A
ASP
520
-64.40
-73.01
1
A
TYR
527
-108.53
-64.95
1
A
PRO
529
-79.96
-169.18
1
B
PRO
462
-80.00
49.94
1
B
ALA
528
-174.11
149.90
29.511
-1.57
0.00
0.00
3.08
0.00
-1.51
0.951
0.921
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.23737
0.18927
0.19175
2.32
30.00
1333
25068
25068
5.0
100
11.740
0.150
RANDOM
1
ISOTROPIC
THROUGHOUT
0.000
MOLECULAR REPLACEMENT
0.231
0.80
0.80
1.20
pdb entry 3S83
MAXIMUM LIKELIHOOD
MASK
2.32
30.00
154
4171
6
94
3917
0.015
0.019
4111
0.001
0.020
2764
1.738
1.979
5599
0.971
3.000
6713
2.959
5.000
517
33.546
23.200
175
12.239
15.000
609
12.405
15.000
38
0.109
0.200
632
0.009
0.021
4584
0.002
0.020
842
0.325
0.261
2.383
68
1569
20
89.50
2.32
30.00
3U2E
51468
51468
-3.000
0.093
1
30.76
7.7
100
0.454
2.32
2.36
5.02
1
7.6
100
data collection
Blu-Ice
Max
phasing
PHASER
refinement
REFMAC
5.6.0117
data reduction
HKL-3000
data scaling
HKL-3000
EAL domain of phosphodiesterase PdeA in complex with 5'-pGpG and Mg++
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
A
SER
287
A
SER
2
HELX_P
A
ARG
296
A
ARG
11
1
1
10
A
PRO
337
A
PRO
52
HELX_P
A
GLU
340
A
GLU
55
5
2
4
A
PHE
341
A
PHE
56
HELX_P
A
MSE
348
A
MSE
63
1
3
8
A
LEU
350
A
LEU
65
HELX_P
A
HIS
373
A
HIS
88
1
4
24
A
GLY
388
A
GLY
103
HELX_P
A
ARG
392
A
ARG
107
5
5
5
A
GLY
394
A
GLY
109
HELX_P
A
ASN
406
A
ASN
121
1
6
13
A
GLU
419
A
GLU
134
HELX_P
A
ARG
424
A
ARG
139
1
7
6
A
ASP
425
A
ASP
140
HELX_P
A
GLY
440
A
GLY
155
1
8
16
A
SER
454
A
SER
169
HELX_P
A
LEU
461
A
LEU
176
1
9
8
A
ASP
469
A
ASP
184
HELX_P
A
MSE
476
A
MSE
191
1
10
8
A
ASN
479
A
ASN
194
HELX_P
A
LEU
496
A
LEU
211
1
11
18
A
ASN
507
A
ASN
222
HELX_P
A
SER
516
A
SER
231
1
12
10
A
SER
532
A
SER
247
HELX_P
A
TYR
544
A
TYR
259
1
13
13
B
SER
287
B
SER
2
HELX_P
B
ARG
296
B
ARG
11
1
14
10
B
PRO
337
B
PRO
52
HELX_P
B
GLY
349
B
GLY
64
1
15
13
B
LEU
350
B
LEU
65
HELX_P
B
HIS
373
B
HIS
88
1
16
24
B
GLY
388
B
GLY
103
HELX_P
B
ARG
392
B
ARG
107
5
17
5
B
GLY
394
B
GLY
109
HELX_P
B
ASN
406
B
ASN
121
1
18
13
B
GLU
419
B
GLU
134
HELX_P
B
ARG
424
B
ARG
139
1
19
6
B
ASP
425
B
ASP
140
HELX_P
B
ALA
439
B
ALA
154
1
20
15
B
SER
454
B
SER
169
HELX_P
B
THR
459
B
THR
174
1
21
6
B
ASP
469
B
ASP
184
HELX_P
B
MSE
476
B
MSE
191
1
22
8
B
ASN
479
B
ASN
194
HELX_P
B
ASP
497
B
ASP
212
1
23
19
B
ASN
507
B
ASN
222
HELX_P
B
LEU
517
B
LEU
232
1
24
11
B
SER
532
B
SER
247
HELX_P
B
LEU
540
B
LEU
255
1
25
9
covale
1.324
both
A
GLY
334
A
C
GLY
49
1_555
A
MSE
335
A
N
MSE
50
1_555
covale
1.319
both
A
MSE
335
A
C
MSE
50
1_555
A
LEU
336
A
N
LEU
51
1_555
covale
1.331
both
A
GLU
347
A
C
GLU
62
1_555
A
MSE
348
A
N
MSE
63
1_555
covale
1.330
both
A
MSE
348
A
C
MSE
63
1_555
A
GLY
349
A
N
GLY
64
1_555
covale
1.334
both
A
LEU
350
A
C
LEU
65
1_555
A
MSE
351
A
N
MSE
66
1_555
covale
1.313
both
A
MSE
351
A
C
MSE
66
1_555
A
SER
352
A
N
SER
67
1_555
covale
1.323
both
A
HIS
357
A
C
HIS
72
1_555
A
MSE
358
A
N
MSE
73
1_555
covale
1.313
both
A
MSE
358
A
C
MSE
73
1_555
A
MSE
359
A
N
MSE
74
1_555
covale
1.328
both
A
MSE
359
A
C
MSE
74
1_555
A
HIS
360
A
N
HIS
75
1_555
covale
1.325
both
A
ALA
375
A
C
ALA
90
1_555
A
MSE
376
A
N
MSE
91
1_555
covale
1.326
both
A
MSE
376
A
C
MSE
91
1_555
A
GLY
377
A
N
GLY
92
1_555
covale
1.335
both
A
ILE
422
A
C
ILE
137
1_555
A
MSE
423
A
N
MSE
138
1_555
covale
1.325
both
A
MSE
423
A
C
MSE
138
1_555
A
ARG
424
A
N
ARG
139
1_555
covale
1.326
both
A
THR
475
A
C
THR
190
1_555
A
MSE
476
A
N
MSE
191
1_555
covale
1.333
both
A
MSE
476
A
C
MSE
191
1_555
A
GLY
477
A
N
GLY
192
1_555
covale
1.325
both
A
GLU
509
A
C
GLU
224
1_555
A
MSE
510
A
N
MSE
225
1_555
covale
1.330
both
A
MSE
510
A
C
MSE
225
1_555
A
ALA
511
A
N
ALA
226
1_555
covale
1.321
both
B
GLY
334
B
C
GLY
49
1_555
B
MSE
335
B
N
MSE
50
1_555
covale
1.339
both
B
MSE
335
B
C
MSE
50
1_555
B
LEU
336
B
N
LEU
51
1_555
covale
1.319
both
B
GLU
347
B
C
GLU
62
1_555
B
MSE
348
B
N
MSE
63
1_555
covale
1.345
both
B
MSE
348
B
C
MSE
63
1_555
B
GLY
349
B
N
GLY
64
1_555
covale
1.330
both
B
LEU
350
B
C
LEU
65
1_555
B
MSE
351
B
N
MSE
66
1_555
covale
1.319
both
B
MSE
351
B
C
MSE
66
1_555
B
SER
352
B
N
SER
67
1_555
covale
1.318
both
B
HIS
357
B
C
HIS
72
1_555
B
MSE
358
B
N
MSE
73
1_555
covale
1.303
both
B
MSE
358
B
C
MSE
73
1_555
B
MSE
359
B
N
MSE
74
1_555
covale
1.297
both
B
MSE
359
B
C
MSE
74
1_555
B
HIS
360
B
N
HIS
75
1_555
covale
1.336
both
B
ALA
375
B
C
ALA
90
1_555
B
MSE
376
B
N
MSE
91
1_555
covale
1.333
both
B
MSE
376
B
C
MSE
91
1_555
B
GLY
377
B
N
GLY
92
1_555
covale
1.320
both
B
ILE
422
B
C
ILE
137
1_555
B
MSE
423
B
N
MSE
138
1_555
covale
1.342
both
B
MSE
423
B
C
MSE
138
1_555
B
ARG
424
B
N
ARG
139
1_555
covale
1.329
both
B
THR
475
B
C
THR
190
1_555
B
MSE
476
B
N
MSE
191
1_555
covale
1.322
both
B
MSE
476
B
C
MSE
191
1_555
B
GLY
477
B
N
GLY
192
1_555
covale
1.319
both
B
GLU
509
B
C
GLU
224
1_555
B
MSE
510
B
N
MSE
225
1_555
covale
1.335
both
B
MSE
510
B
C
MSE
225
1_555
B
ALA
511
B
N
ALA
226
1_555
metalc
2.223
A
MG
2
E
MG
MG
1_555
A
GLU
323
A
OE2
GLU
38
1_555
metalc
2.068
A
MG
2
E
MG
MG
1_555
A
ASN
384
A
OD1
ASN
99
1_555
metalc
2.084
A
MG
2
E
MG
MG
1_555
A
GLU
416
A
OE1
GLU
131
1_555
metalc
2.010
A
MG
2
E
MG
MG
1_555
A
ASP
446
A
OD2
ASP
161
1_555
metalc
2.125
A
MG
2
E
MG
MG
1_555
C
G
601
C
OP2
G
1
1_555
metalc
2.163
A
MG
3
F
MG
MG
1_555
A
ASP
446
A
OD1
ASP
161
1_555
metalc
1.883
A
MG
3
F
MG
MG
1_555
A
ASP
447
A
OD1
ASP
162
1_555
metalc
2.178
A
MG
3
F
MG
MG
1_555
A
GLU
503
A
OE1
GLU
218
1_555
metalc
2.188
A
MG
3
F
MG
MG
1_555
A
GLU
503
A
OE2
GLU
218
1_555
metalc
1.945
A
MG
3
F
MG
MG
1_555
C
G
601
C
OP3
G
1
1_555
metalc
2.131
A
HOH
149
K
O
HOH
1_555
C
MG
5
I
MG
MG
1_555
metalc
1.939
A
HOH
150
K
O
HOH
1_555
C
MG
5
I
MG
MG
1_555
metalc
2.088
A
HOH
151
K
O
HOH
1_555
C
MG
5
I
MG
MG
1_555
metalc
2.276
B
MG
1
G
MG
MG
1_555
B
HOH
2
L
O
HOH
1_555
metalc
2.126
B
MG
1
G
MG
MG
1_555
B
GLU
323
B
OE2
GLU
38
1_555
metalc
2.187
B
MG
1
G
MG
MG
1_555
B
ASN
384
B
OD1
ASN
99
1_555
metalc
2.093
B
MG
1
G
MG
MG
1_555
B
GLU
416
B
OE2
GLU
131
1_555
metalc
2.044
B
MG
1
G
MG
MG
1_555
B
ASP
446
B
OD2
ASP
161
1_555
metalc
2.156
B
MG
1
G
MG
MG
1_555
D
G
601
D
OP2
G
1
1_555
metalc
2.605
B
MG
4
H
MG
MG
1_555
B
HOH
80
L
O
HOH
1_555
metalc
2.233
B
MG
4
H
MG
MG
1_555
B
ASP
446
B
OD1
ASP
161
1_555
metalc
2.080
B
MG
4
H
MG
MG
1_555
B
ASP
447
B
OD1
ASP
162
1_555
metalc
2.182
B
MG
4
H
MG
MG
1_555
B
GLU
503
B
OE2
GLU
218
1_555
metalc
2.203
B
MG
4
H
MG
MG
1_555
B
GLU
503
B
OE1
GLU
218
1_555
metalc
1.908
B
MG
4
H
MG
MG
1_555
D
G
601
D
OP3
G
1
1_555
metalc
2.079
B
HOH
65
L
O
HOH
1_555
D
MG
6
J
MG
MG
1_555
metalc
2.358
C
MG
5
I
MG
MG
1_555
C
G
601
C
OP1
G
1
1_555
metalc
2.302
C
MG
5
I
MG
MG
1_555
C
G
602
C
O3'
G
2
1_555
metalc
2.424
C
MG
5
I
MG
MG
1_555
C
G
602
C
O2'
G
2
1_555
metalc
2.093
D
MG
6
J
MG
MG
1_555
D
HOH
64
N
O
HOH
1_555
metalc
2.407
D
MG
6
J
MG
MG
1_555
D
G
601
D
OP1
G
1
1_555
metalc
2.448
D
MG
6
J
MG
MG
1_555
D
G
602
D
O3'
G
2
1_555
metalc
2.493
D
MG
6
J
MG
MG
1_555
D
G
602
D
O2'
G
2
1_555
lyase/RNA
Structural Genomics, PSI-Biology, Midwest Center for Structural Genomics, MCSG, GGDEF, EAL, c-diGMP, lyase-RNA complex
Q9A310_CAUCR
UNP
1
286
Q9A310
LSRLALEADLRGAIGRGEITPYFQPIVRLSTGALSGFEALARWIHPRRGMLPPDEFLPLIEEMGLMSELGAHMMHAAAQQ
LSTWRAAHPAMGNLTVSVNLSTGEIDRPGLVADVAETLRVNRLPRGALKLEVTESDIMRDPERAAVILKTLRDAGAGLAL
DDFGTGFSSLSYLTRLPFDTLKIDRYFVRTMGNNAGSAKIVRSVVKLGQDLDLEVVAEGVENAEMAHALQSLGCDYGQGF
GYAPALSPQEAEVYLNEAYVD
3U2E
PDB
2
3U2E
286
546
3U2E
286
546
Q9A310
A
1
1
261
286
546
3U2E
286
546
Q9A310
B
1
1
261
601
602
3U2E
601
602
3U2E
C
2
1
2
601
602
3U2E
601
602
3U2E
D
2
1
2
10
10
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
A
GLY
334
A
GLY
49
A
LEU
336
A
LEU
51
A
LEU
319
A
LEU
34
A
HIS
330
A
HIS
45
A
THR
380
A
THR
95
A
ASN
384
A
ASN
99
A
LEU
413
A
LEU
128
A
THR
418
A
THR
133
A
GLY
442
A
GLY
157
A
PHE
448
A
PHE
163
A
THR
465
A
THR
180
A
ILE
468
A
ILE
183
A
GLU
499
A
GLU
214
A
ALA
502
A
ALA
217
A
TYR
521
A
TYR
236
A
GLY
522
A
GLY
237
A
ILE
304
A
ILE
19
A
ARG
313
A
ARG
28
A
LEU
319
A
LEU
34
A
HIS
330
A
HIS
45
B
GLY
334
B
GLY
49
B
LEU
336
B
LEU
51
B
LEU
319
B
LEU
34
B
HIS
330
B
HIS
45
B
THR
380
B
THR
95
B
ASN
384
B
ASN
99
B
LEU
413
B
LEU
128
B
THR
418
B
THR
133
B
GLY
442
B
GLY
157
B
PHE
448
B
PHE
163
B
THR
465
B
THR
180
B
ILE
468
B
ILE
183
B
GLU
499
B
GLU
214
B
GLU
503
B
GLU
218
B
TYR
521
B
TYR
236
B
GLN
523
B
GLN
238
B
ILE
304
B
ILE
19
B
ARG
313
B
ARG
28
B
LEU
319
B
LEU
34
B
HIS
330
B
HIS
45
BINDING SITE FOR RESIDUE MG A 2
A
MG
2
Software
5
BINDING SITE FOR RESIDUE MG A 3
A
MG
3
Software
4
BINDING SITE FOR RESIDUE MG B 1
B
MG
1
Software
6
BINDING SITE FOR RESIDUE MG B 4
B
MG
4
Software
5
BINDING SITE FOR RESIDUE MG C 5
C
MG
5
Software
5
BINDING SITE FOR RESIDUE MG D 6
D
MG
6
Software
4
A
GLU
323
A
GLU
38
5
1_555
A
ASN
384
A
ASN
99
5
1_555
A
GLU
416
A
GLU
131
5
1_555
A
ASP
446
A
ASP
161
5
1_555
C
G
601
C
G
1
5
1_555
A
ASP
446
A
ASP
161
4
1_555
A
ASP
447
A
ASP
162
4
1_555
A
GLU
503
A
GLU
218
4
1_555
C
G
601
C
G
1
4
1_555
B
HOH
2
L
HOH
6
1_555
B
GLU
323
B
GLU
38
6
1_555
B
ASN
384
B
ASN
99
6
1_555
B
GLU
416
B
GLU
131
6
1_555
B
ASP
446
B
ASP
161
6
1_555
D
G
601
D
G
1
6
1_555
B
HOH
80
L
HOH
5
1_555
B
ASP
446
B
ASP
161
5
1_555
B
ASP
447
B
ASP
162
5
1_555
B
GLU
503
B
GLU
218
5
1_555
D
G
601
D
G
1
5
1_555
A
HOH
149
K
HOH
5
1_555
A
HOH
150
K
HOH
5
1_555
A
HOH
151
K
HOH
5
1_555
C
G
601
C
G
1
5
1_555
C
G
602
C
G
2
5
1_555
B
HOH
65
L
HOH
4
1_555
D
HOH
64
N
HOH
4
1_555
D
G
601
D
G
1
4
1_555
D
G
602
D
G
2
4
1_555
19
P 21 21 21