0.019649
0.000000
0.000000
0.000000
0.013048
0.000000
0.000000
0.000000
0.015985
0.00000
0.00000
0.00000
Banci, L.
Bertini, I.
Calderone, V.
Cefaro, C.
Ciofi-Baffoni, S.
Gallo, A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
50.894
76.641
62.560
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C27 H33 N9 O15 P2
785.550
FLAVIN-ADENINE DINUCLEOTIDE
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
R
P
N
89
N
O
N
90
N
O
N
91
N
O
N
92
N
C
N
93
R
C
N
94
N
O
N
95
S
C
N
96
N
O
N
97
R
C
N
98
N
O
N
99
R
C
Y
100
N
N
Y
101
N
C
Y
102
N
N
Y
103
N
C
Y
104
N
C
N
105
N
N
Y
106
N
N
Y
107
N
C
Y
108
N
N
Y
109
N
C
N
110
N
N
N
111
N
C
N
112
N
O
N
113
N
N
N
114
N
C
N
115
N
O
N
116
N
C
N
117
N
N
Y
118
N
C
Y
119
N
C
Y
120
N
C
N
121
N
C
Y
122
N
C
N
123
N
C
Y
124
N
C
Y
125
N
C
N
126
N
N
N
127
N
C
N
128
N
C
N
129
S
C
N
130
N
O
N
131
S
C
N
132
N
O
N
133
R
C
N
134
N
O
N
135
N
C
N
136
N
O
N
137
R
P
N
138
N
O
N
139
N
O
N
140
N
O
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
N
N
175
S
C
N
176
N
C
N
177
N
O
N
178
N
C
N
179
N
C
N
180
N
C
N
181
N
O
N
182
N
N
N
183
N
O
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
N
N
195
S
C
N
196
N
C
N
197
N
O
N
198
N
C
N
199
N
C
N
200
N
C
N
201
N
O
N
202
N
O
N
203
N
O
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
N
N
214
N
C
N
215
N
C
N
216
N
O
N
217
N
O
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
N
N
224
S
C
N
225
N
C
N
226
N
O
N
227
N
C
Y
228
N
C
Y
229
N
N
Y
230
N
C
Y
231
N
C
Y
232
N
N
N
233
N
O
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
O
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
S
C
N
252
N
C
N
253
N
C
N
254
N
C
N
255
N
O
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
N
N
270
S
C
N
271
N
C
N
272
N
O
N
273
N
C
N
274
N
C
N
275
N
C
N
276
N
C
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
N
N
292
S
C
N
293
N
C
N
294
N
O
N
295
N
C
N
296
N
C
N
297
N
C
N
298
N
C
N
299
N
N
N
300
N
O
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
N
N
317
S
C
N
318
N
C
N
319
N
O
N
320
N
C
N
321
N
C
N
322
N
S
N
323
N
C
N
324
N
O
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
N
N
337
S
C
N
338
N
C
N
339
N
O
N
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
C
Y
344
N
C
Y
345
N
C
Y
346
N
C
N
347
N
O
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
N
N
360
S
C
N
361
N
C
N
362
N
O
N
363
N
C
N
364
N
C
N
365
N
C
N
366
N
O
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
N
N
377
S
C
N
378
N
C
N
379
N
O
N
380
N
C
N
381
N
O
N
382
N
O
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
N
N
391
S
C
N
392
N
C
N
393
N
O
N
394
R
C
N
395
N
O
N
396
N
C
N
397
N
O
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
N
N
408
S
C
N
409
N
C
N
410
N
O
N
411
N
C
Y
412
N
C
Y
413
N
C
Y
414
N
C
Y
415
N
N
Y
416
N
C
Y
417
N
C
Y
418
N
C
Y
419
N
C
Y
420
N
C
N
421
N
O
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
N
N
435
S
C
N
436
N
C
N
437
N
O
N
438
N
C
Y
439
N
C
Y
440
N
C
Y
441
N
C
Y
442
N
C
Y
443
N
C
Y
444
N
C
N
445
N
O
N
446
N
O
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
N
N
459
S
C
N
460
N
C
N
461
N
O
N
462
N
C
N
463
N
C
N
464
N
C
N
465
N
O
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
doub
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
Y
106
N
sing
Y
107
N
sing
Y
108
N
doub
N
109
N
sing
Y
110
N
sing
Y
111
N
sing
Y
112
N
doub
N
113
N
sing
Y
114
N
doub
N
115
N
sing
N
116
N
sing
Y
117
N
sing
Y
118
N
doub
N
119
N
sing
Y
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
doub
N
128
N
sing
N
129
N
doub
N
130
N
sing
N
131
N
sing
Y
132
N
doub
Y
133
N
sing
Y
134
N
sing
N
135
N
sing
N
136
N
sing
Y
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
Y
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
Y
146
N
doub
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
doub
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
doub
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
doub
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
doub
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
doub
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
doub
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
Y
231
N
sing
Y
232
N
doub
Y
233
N
doub
N
234
N
sing
Y
235
N
sing
N
236
N
sing
Y
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
doub
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
doub
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
doub
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
Y
339
N
doub
Y
340
N
sing
Y
341
N
sing
N
342
N
sing
Y
343
N
doub
N
344
N
sing
Y
345
N
doub
N
346
N
sing
Y
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
doub
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
doub
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
doub
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
doub
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
Y
408
N
doub
Y
409
N
sing
Y
410
N
sing
N
411
N
sing
Y
412
N
doub
Y
413
N
sing
Y
414
N
sing
N
415
N
sing
Y
416
N
sing
Y
417
N
doub
N
418
N
sing
Y
419
N
doub
N
420
N
sing
Y
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
doub
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
Y
436
N
doub
Y
437
N
sing
Y
438
N
sing
N
439
N
sing
Y
440
N
doub
N
441
N
sing
Y
442
N
doub
N
443
N
sing
Y
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
doub
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
US
J.Am.Chem.Soc.
JACSAT
0004
0002-7863
134
1442
1445
10.1021/ja209881f
22224850
An electron-transfer path through an extended disulfide relay system: the case of the redox protein ALR.
2012
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
108
4811
4816
10.1073/pnas.1014542108
21383138
Molecular recognition and substrate mimicry drive the electron-transfer process between MIA40 and ALR.
2011
10.2210/pdb3u2l/pdb
pdb_00003u2l
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
mirrors
CCD
2010-07-14
OXFORD ONYX CCD
graphite
SINGLE WAVELENGTH
M
x-ray
1
1.541
1.0
1.541
SEALED TUBE
OXFORD DIFFRACTION ENHANCE ULTRA
13698.232
FAD-linked sulfhydryl oxidase ALR
1.8.3.2
unp residues 91-205
C142S
1
man
polymer
785.550
FLAVIN-ADENINE DINUCLEOTIDE
1
syn
non-polymer
18.015
water
121
nat
water
Augmenter of liver regeneration, hERV1, Hepatopoietin
no
no
FREDCPPDREELGRHSWAVLHTLAAYYPDLPTPEQQQDMAQFIHLFSKFYPSEECAEDLRKRLARNHPDTRTRAAFTQWL
CHLHNEVNRKLGKPDFDCSKVDERWRDGWKDGSCD
FREDCPPDREELGRHSWAVLHTLAAYYPDLPTPEQQQDMAQFIHLFSKFYPSEECAEDLRKRLARNHPDTRTRAAFTQWL
CHLHNEVNRKLGKPDFDCSKVDERWRDGWKDGSCD
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
GFER, ALR, HERV1, HPO
9606
Homo sapiens
469008
Escherichia coli
BL21 DE3
PLASMID
pDEST-His-MBP
1
2.23
44.76
VAPOR DIFFUSION, SITTING DROP
6.0
0.1 M MES, 20% PEG6000, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K
298
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
struct_site
repository
Initial release
Refinement description
Data collection
Database references
Derived calculations
Refinement description
1
0
2012-06-06
1
1
2017-11-08
1
2
2023-09-13
_software.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Crystal structure of human FAD-linked augmenter of liver regeneration (ALR)
RCSB
Y
RCSB
2011-10-04
REL
REL
FAD
FLAVIN-ADENINE DINUCLEOTIDE
HOH
water
3O55
PDB
experimental model
FAD
0
2
FAD
FAD
301
A
HOH
1
3
HOH
HOH
401
A
HOH
2
3
HOH
HOH
402
A
HOH
3
3
HOH
HOH
403
A
HOH
4
3
HOH
HOH
404
A
HOH
5
3
HOH
HOH
405
A
HOH
6
3
HOH
HOH
406
A
HOH
7
3
HOH
HOH
407
A
HOH
8
3
HOH
HOH
408
A
HOH
9
3
HOH
HOH
409
A
HOH
10
3
HOH
HOH
410
A
HOH
11
3
HOH
HOH
411
A
HOH
12
3
HOH
HOH
412
A
HOH
13
3
HOH
HOH
413
A
HOH
14
3
HOH
HOH
414
A
HOH
15
3
HOH
HOH
415
A
HOH
16
3
HOH
HOH
416
A
HOH
18
3
HOH
HOH
417
A
HOH
19
3
HOH
HOH
418
A
HOH
20
3
HOH
HOH
419
A
HOH
21
3
HOH
HOH
420
A
HOH
22
3
HOH
HOH
421
A
HOH
23
3
HOH
HOH
422
A
HOH
24
3
HOH
HOH
423
A
HOH
25
3
HOH
HOH
424
A
HOH
26
3
HOH
HOH
425
A
HOH
27
3
HOH
HOH
426
A
HOH
28
3
HOH
HOH
427
A
HOH
29
3
HOH
HOH
428
A
HOH
30
3
HOH
HOH
429
A
HOH
31
3
HOH
HOH
430
A
HOH
32
3
HOH
HOH
431
A
HOH
33
3
HOH
HOH
432
A
HOH
34
3
HOH
HOH
433
A
HOH
35
3
HOH
HOH
434
A
HOH
36
3
HOH
HOH
435
A
HOH
37
3
HOH
HOH
436
A
HOH
38
3
HOH
HOH
437
A
HOH
39
3
HOH
HOH
438
A
HOH
40
3
HOH
HOH
439
A
HOH
41
3
HOH
HOH
440
A
HOH
42
3
HOH
HOH
441
A
HOH
43
3
HOH
HOH
442
A
HOH
44
3
HOH
HOH
443
A
HOH
45
3
HOH
HOH
444
A
HOH
46
3
HOH
HOH
445
A
HOH
47
3
HOH
HOH
446
A
HOH
48
3
HOH
HOH
447
A
HOH
49
3
HOH
HOH
448
A
HOH
50
3
HOH
HOH
449
A
HOH
51
3
HOH
HOH
450
A
HOH
52
3
HOH
HOH
451
A
HOH
53
3
HOH
HOH
452
A
HOH
54
3
HOH
HOH
453
A
HOH
55
3
HOH
HOH
454
A
HOH
56
3
HOH
HOH
455
A
HOH
57
3
HOH
HOH
456
A
HOH
58
3
HOH
HOH
457
A
HOH
59
3
HOH
HOH
458
A
HOH
60
3
HOH
HOH
459
A
HOH
61
3
HOH
HOH
460
A
HOH
62
3
HOH
HOH
461
A
HOH
63
3
HOH
HOH
462
A
HOH
64
3
HOH
HOH
463
A
HOH
65
3
HOH
HOH
464
A
HOH
66
3
HOH
HOH
465
A
HOH
67
3
HOH
HOH
466
A
HOH
68
3
HOH
HOH
467
A
HOH
69
3
HOH
HOH
468
A
HOH
70
3
HOH
HOH
469
A
HOH
71
3
HOH
HOH
470
A
HOH
72
3
HOH
HOH
471
A
HOH
73
3
HOH
HOH
472
A
HOH
74
3
HOH
HOH
473
A
HOH
75
3
HOH
HOH
474
A
HOH
76
3
HOH
HOH
475
A
HOH
77
3
HOH
HOH
476
A
HOH
78
3
HOH
HOH
477
A
HOH
79
3
HOH
HOH
478
A
HOH
80
3
HOH
HOH
479
A
HOH
81
3
HOH
HOH
480
A
HOH
82
3
HOH
HOH
481
A
HOH
83
3
HOH
HOH
482
A
HOH
85
3
HOH
HOH
483
A
HOH
86
3
HOH
HOH
484
A
HOH
87
3
HOH
HOH
485
A
HOH
88
3
HOH
HOH
486
A
HOH
89
3
HOH
HOH
487
A
HOH
90
3
HOH
HOH
488
A
HOH
91
3
HOH
HOH
489
A
HOH
92
3
HOH
HOH
490
A
HOH
93
3
HOH
HOH
491
A
HOH
94
3
HOH
HOH
492
A
HOH
95
3
HOH
HOH
493
A
HOH
96
3
HOH
HOH
494
A
HOH
97
3
HOH
HOH
495
A
HOH
98
3
HOH
HOH
496
A
HOH
99
3
HOH
HOH
497
A
HOH
100
3
HOH
HOH
498
A
HOH
101
3
HOH
HOH
499
A
HOH
102
3
HOH
HOH
500
A
HOH
103
3
HOH
HOH
501
A
HOH
104
3
HOH
HOH
502
A
HOH
105
3
HOH
HOH
503
A
HOH
106
3
HOH
HOH
504
A
HOH
107
3
HOH
HOH
505
A
HOH
108
3
HOH
HOH
506
A
HOH
109
3
HOH
HOH
507
A
HOH
110
3
HOH
HOH
508
A
HOH
111
3
HOH
HOH
509
A
HOH
112
3
HOH
HOH
510
A
HOH
113
3
HOH
HOH
511
A
HOH
114
3
HOH
HOH
512
A
HOH
115
3
HOH
HOH
513
A
HOH
116
3
HOH
HOH
514
A
HOH
117
3
HOH
HOH
515
A
HOH
118
3
HOH
HOH
516
A
HOH
119
3
HOH
HOH
517
A
HOH
120
3
HOH
HOH
518
A
HOH
121
3
HOH
HOH
519
A
HOH
122
3
HOH
HOH
520
A
HOH
124
3
HOH
HOH
521
A
PHE
15
n
1
PHE
91
A
ARG
16
n
2
ARG
92
A
GLU
17
n
3
GLU
93
A
ASP
18
n
4
ASP
94
A
CYS
19
n
5
CYS
95
A
PRO
20
n
6
PRO
96
A
PRO
21
n
7
PRO
97
A
ASP
22
n
8
ASP
98
A
ARG
23
n
9
ARG
99
A
GLU
24
n
10
GLU
100
A
GLU
25
n
11
GLU
101
A
LEU
26
n
12
LEU
102
A
GLY
27
n
13
GLY
103
A
ARG
28
n
14
ARG
104
A
HIS
29
n
15
HIS
105
A
SER
30
n
16
SER
106
A
TRP
31
n
17
TRP
107
A
ALA
32
n
18
ALA
108
A
VAL
33
n
19
VAL
109
A
LEU
34
n
20
LEU
110
A
HIS
35
n
21
HIS
111
A
THR
36
n
22
THR
112
A
LEU
37
n
23
LEU
113
A
ALA
38
n
24
ALA
114
A
ALA
39
n
25
ALA
115
A
TYR
40
n
26
TYR
116
A
TYR
41
n
27
TYR
117
A
PRO
42
n
28
PRO
118
A
ASP
43
n
29
ASP
119
A
LEU
44
n
30
LEU
120
A
PRO
45
n
31
PRO
121
A
THR
46
n
32
THR
122
A
PRO
47
n
33
PRO
123
A
GLU
48
n
34
GLU
124
A
GLN
49
n
35
GLN
125
A
GLN
50
n
36
GLN
126
A
GLN
51
n
37
GLN
127
A
ASP
52
n
38
ASP
128
A
MET
53
n
39
MET
129
A
ALA
54
n
40
ALA
130
A
GLN
55
n
41
GLN
131
A
PHE
56
n
42
PHE
132
A
ILE
57
n
43
ILE
133
A
HIS
58
n
44
HIS
134
A
LEU
59
n
45
LEU
135
A
PHE
60
n
46
PHE
136
A
SER
61
n
47
SER
137
A
LYS
62
n
48
LYS
138
A
PHE
63
n
49
PHE
139
A
TYR
64
n
50
TYR
140
A
PRO
65
n
51
PRO
141
A
SER
66
n
52
SER
142
A
GLU
67
n
53
GLU
143
A
GLU
68
n
54
GLU
144
A
CYS
69
n
55
CYS
145
A
ALA
70
n
56
ALA
146
A
GLU
71
n
57
GLU
147
A
ASP
72
n
58
ASP
148
A
LEU
73
n
59
LEU
149
A
ARG
74
n
60
ARG
150
A
LYS
75
n
61
LYS
151
A
ARG
76
n
62
ARG
152
A
LEU
77
n
63
LEU
153
A
ALA
78
n
64
ALA
154
A
ARG
79
n
65
ARG
155
A
ASN
80
n
66
ASN
156
A
HIS
81
n
67
HIS
157
A
PRO
82
n
68
PRO
158
A
ASP
83
n
69
ASP
159
A
THR
84
n
70
THR
160
A
ARG
85
n
71
ARG
161
A
THR
86
n
72
THR
162
A
ARG
87
n
73
ARG
163
A
ALA
88
n
74
ALA
164
A
ALA
89
n
75
ALA
165
A
PHE
90
n
76
PHE
166
A
THR
91
n
77
THR
167
A
GLN
92
n
78
GLN
168
A
TRP
93
n
79
TRP
169
A
LEU
94
n
80
LEU
170
A
CYS
95
n
81
CYS
171
A
HIS
96
n
82
HIS
172
A
LEU
97
n
83
LEU
173
A
HIS
98
n
84
HIS
174
A
ASN
99
n
85
ASN
175
A
GLU
100
n
86
GLU
176
A
VAL
101
n
87
VAL
177
A
ASN
102
n
88
ASN
178
A
ARG
103
n
89
ARG
179
A
LYS
104
n
90
LYS
180
A
LEU
105
n
91
LEU
181
A
GLY
106
n
92
GLY
182
A
LYS
107
n
93
LYS
183
A
PRO
108
n
94
PRO
184
A
ASP
109
n
95
ASP
185
A
PHE
110
n
96
PHE
186
A
ASP
111
n
97
ASP
187
A
CYS
112
n
98
CYS
188
A
SER
113
n
99
SER
189
A
LYS
114
n
100
LYS
190
A
VAL
115
n
101
VAL
191
A
ASP
116
n
102
ASP
192
A
GLU
117
n
103
GLU
193
A
ARG
118
n
104
ARG
194
A
TRP
119
n
105
TRP
195
A
ARG
120
n
106
ARG
196
A
ASP
121
n
107
ASP
197
A
GLY
122
n
108
GLY
198
A
TRP
123
n
109
TRP
199
A
LYS
124
n
110
LYS
200
A
ASP
125
n
111
ASP
201
A
GLY
126
n
112
GLY
202
A
SER
127
n
113
SER
203
A
CYS
128
n
114
CYS
204
A
ASP
129
n
115
ASP
205
A
author_and_software_defined_assembly
PISA
2
dimeric
5870
-42
12080
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
3_555
-x,y,-z+1/2
crystal symmetry operation
0.0000000000
0.0000000000
31.2800000000
1
A
HOH
462
C
HOH
1
A
A
CB
CG
GLU
GLU
143
143
0.135
0.019
1.517
1.652
N
1
A
A
CG
CD
GLU
GLU
143
143
0.144
0.015
1.515
1.659
N
1
A
ARG
196
-137.01
-57.78
17.759
-0.45
-0.00
0.00
1.12
-0.00
-0.67
0.942
0.888
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.26476
0.18894
0.19557
0.19557
1.95
25.45
832
8364
8364
9.0
100.00
4.321
0.126
RANDOM
1
Isotropic
THROUGHOUT
0
MOLECULAR REPLACEMENT
0.197
0.80
0.80
1.40
3O55
MAXIMUM LIKELIHOOD
MASK
1.95
25.45
121
1138
53
0
964
0.022
0.021
1054
1.816
1.996
1439
6.389
5.000
114
32.065
23.051
59
15.970
15.000
163
11.033
15.000
11
0.121
0.200
137
0.011
0.021
834
1.057
1.500
579
1.856
2.000
933
3.142
3.000
475
4.719
4.500
506
0.360
0.233
2.000
61
603
1312
20
100.00
19.4
1.9
25.45
3U2L
9237
9237
0
0
0.10
0.10
1
6.6
11.3
99.9
0.44
1.9
2.0
1.8
1312
0.44
1
9.9
99.9
data collection
CrysalisPro
phasing
MOLREP
refinement
REFMAC
5.5.0109
data reduction
MOSFLM
data scaling
SCALA
Crystal structure of human ALR mutant C142S.
1
N
N
2
N
N
3
N
N
A
ASP
98
A
ASP
8
HELX_P
A
TYR
116
A
TYR
26
1
1
19
A
THR
122
A
THR
32
HELX_P
A
TYR
140
A
TYR
50
1
2
19
A
SER
142
A
SER
52
HELX_P
A
ASN
156
A
ASN
66
1
3
15
A
THR
162
A
THR
72
HELX_P
A
LEU
181
A
LEU
91
1
4
20
A
ASP
187
A
ASP
97
HELX_P
A
SER
189
A
SER
99
5
5
3
A
LYS
190
A
LYS
100
HELX_P
A
ARG
196
A
ARG
106
1
6
7
disulf
2.090
A
CYS
95
A
SG
CYS
5
1_555
A
CYS
204
A
SG
CYS
114
3_555
disulf
2.086
A
CYS
171
A
SG
CYS
81
1_555
A
CYS
188
A
SG
CYS
98
1_555
FLAVOPROTEIN
Flavoprotein, ALR, Sulfhydryl oxidase, Flavin, FAD
ALR_HUMAN
UNP
1
81
P55789
MRTQQKRDTKFREDCPPDREELGRHSWAVLHTLAAYYPDLPTPEQQQDMAQFIHLFSKFYPCEECAEDLRKRLCRNHPDT
RTRACFTQWLCHLHNEVNRKLGKPDFDCSKVDERWRDGWKDGSCD
91
205
3U2L
91
205
P55789
A
1
1
115
1
CYS
engineered mutation
SER
142
3U2L
A
P55789
UNP
142
52
1
CYS
engineered mutation
ALA
154
3U2L
A
P55789
UNP
154
64
1
CYS
engineered mutation
ALA
165
3U2L
A
P55789
UNP
165
75
BINDING SITE FOR RESIDUE FAD A 301
A
FAD
301
Software
24
A
GLY
103
A
GLY
13
24
1_555
A
ARG
104
A
ARG
14
24
1_555
A
SER
106
A
SER
16
24
1_555
A
TRP
107
A
TRP
17
24
1_555
A
HIS
111
A
HIS
21
24
1_555
A
TYR
140
A
TYR
50
24
1_555
A
CYS
145
A
CYS
55
24
1_555
A
CYS
171
A
CYS
81
24
1_555
A
HIS
174
A
HIS
84
24
1_555
A
ASN
175
A
ASN
85
24
1_555
A
VAL
177
A
VAL
87
24
1_555
A
ASN
178
A
ASN
88
24
1_555
A
LYS
180
A
LYS
90
24
1_555
A
LEU
181
A
LEU
91
24
1_555
A
LYS
183
A
LYS
93
24
1_555
A
PHE
186
A
PHE
96
24
1_555
A
ARG
194
A
ARG
104
24
1_555
A
TRP
195
A
TRP
105
24
1_555
A
HOH
417
C
HOH
24
1_555
A
HOH
424
C
HOH
24
1_555
A
HOH
426
C
HOH
24
1_555
A
HOH
444
C
HOH
24
1_555
A
HOH
474
C
HOH
24
1_555
A
HOH
500
C
HOH
24
1_555
20
C 2 2 21