0.015987
0.000000
0.000000
0.000000
0.014514
0.000000
0.000000
0.000000
0.008506
0.00000
0.00000
0.00000
Gabdulkhakov, A.G.
Nevskaya, N.A.
NIkonov, S.V.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
62.550
68.900
117.560
C10 H14 N5 O7 P
347.221
y
ADENOSINE-5'-MONOPHOSPHATE
RNA linking
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C9 H14 N3 O8 P
323.197
y
CYTIDINE-5'-MONOPHOSPHATE
RNA linking
Cl -1
35.453
CHLORIDE ION
non-polymer
C10 H14 N5 O8 P
363.221
y
GUANOSINE-5'-MONOPHOSPHATE
RNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C3 H2 O4 -2
102.046
MALONATE ION
non-polymer
Na 1
22.990
SODIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C9 H13 N2 O9 P
324.181
y
URIDINE-5'-MONOPHOSPHATE
RNA linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
R
C
N
12
N
O
N
13
R
C
Y
14
N
N
Y
15
N
C
Y
16
N
N
Y
17
N
C
Y
18
N
C
N
19
N
N
Y
20
N
N
Y
21
N
C
Y
22
N
N
Y
23
N
C
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
N
N
39
S
C
N
40
N
C
N
41
N
O
N
42
N
C
N
43
N
O
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
N
N
52
S
C
N
53
N
C
N
54
N
O
N
55
N
C
N
56
N
C
N
57
N
C
N
58
N
N
N
59
N
C
N
60
N
N
N
61
N
N
N
62
N
O
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
N
N
79
S
C
N
80
N
C
N
81
N
O
N
82
N
C
N
83
N
C
N
84
N
O
N
85
N
N
N
86
N
O
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
N
N
96
S
C
N
97
N
C
N
98
N
O
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
O
N
112
N
P
N
113
N
O
N
114
N
O
N
115
N
O
N
116
N
C
N
117
R
C
N
118
N
O
N
119
S
C
N
120
N
O
N
121
R
C
N
122
N
O
N
123
R
C
N
124
N
N
N
125
N
C
N
126
N
O
N
127
N
N
N
128
N
C
N
129
N
N
N
130
N
C
N
131
N
C
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
CL
N
147
N
O
N
148
N
P
N
149
N
O
N
150
N
O
N
151
N
O
N
152
N
C
N
153
R
C
N
154
N
O
N
155
S
C
N
156
N
O
N
157
R
C
N
158
N
O
N
159
R
C
Y
160
N
N
Y
161
N
C
Y
162
N
N
Y
163
N
C
N
164
N
C
N
165
N
O
N
166
N
N
N
167
N
C
N
168
N
N
N
169
N
N
Y
170
N
C
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
N
N
186
S
C
N
187
N
C
N
188
N
O
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
O
N
193
N
N
N
194
N
O
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
O
N
213
N
O
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
N
N
225
N
C
N
226
N
C
N
227
N
O
N
228
N
O
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
N
N
235
S
C
N
236
N
C
N
237
N
O
N
238
N
C
Y
239
N
C
Y
240
N
N
Y
241
N
C
Y
242
N
C
Y
243
N
N
N
244
N
O
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
O
N
256
N
H
N
257
N
H
N
258
N
N
N
259
S
C
N
260
N
C
N
261
N
O
N
262
S
C
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
N
C
N
285
N
C
N
286
N
C
N
287
N
C
N
288
N
O
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
N
N
303
S
C
N
304
N
C
N
305
N
O
N
306
N
C
N
307
N
C
N
308
N
C
N
309
N
C
N
310
N
N
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
N
N
328
S
C
N
329
N
C
N
330
N
O
N
331
N
C
N
332
N
C
N
333
N
S
N
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
MG
N
348
N
C
N
349
N
C
N
350
N
C
N
351
N
O
N
352
N
O
N
353
N
O
N
354
N
O
N
355
N
H
N
356
N
H
N
357
N
NA
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
N
C
Y
363
N
C
Y
364
N
C
Y
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
C
N
369
N
O
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
N
N
382
S
C
N
383
N
C
N
384
N
O
N
385
N
C
N
386
N
C
N
387
N
C
N
388
N
O
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
N
N
399
S
C
N
400
N
C
N
401
N
O
N
402
N
C
N
403
N
O
N
404
N
O
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
S
N
413
N
O
N
414
N
O
N
415
N
O
N
416
N
O
N
417
N
N
N
418
S
C
N
419
N
C
N
420
N
O
N
421
R
C
N
422
N
O
N
423
N
C
N
424
N
O
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
N
N
435
S
C
N
436
N
C
N
437
N
O
N
438
N
C
Y
439
N
C
Y
440
N
C
Y
441
N
C
Y
442
N
N
Y
443
N
C
Y
444
N
C
Y
445
N
C
Y
446
N
C
Y
447
N
C
N
448
N
O
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
N
N
462
S
C
N
463
N
C
N
464
N
O
N
465
N
C
Y
466
N
C
Y
467
N
C
Y
468
N
C
Y
469
N
C
Y
470
N
C
Y
471
N
C
N
472
N
O
N
473
N
O
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
O
N
486
N
P
N
487
N
O
N
488
N
O
N
489
N
O
N
490
N
C
N
491
R
C
N
492
N
O
N
493
S
C
N
494
N
O
N
495
R
C
N
496
N
O
N
497
R
C
N
498
N
N
N
499
N
C
N
500
N
O
N
501
N
N
N
502
N
C
N
503
N
O
N
504
N
C
N
505
N
C
N
506
N
H
N
507
N
H
N
508
N
H
N
509
N
H
N
510
N
H
N
511
N
H
N
512
N
H
N
513
N
H
N
514
N
H
N
515
N
H
N
516
N
H
N
517
N
H
N
518
N
H
N
519
N
N
N
520
S
C
N
521
N
C
N
522
N
O
N
523
N
C
N
524
N
C
N
525
N
C
N
526
N
O
N
527
N
H
N
528
N
H
N
529
N
H
N
530
N
H
N
531
N
H
N
532
N
H
N
533
N
H
N
534
N
H
N
535
N
H
N
536
N
H
N
537
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
Y
25
N
sing
Y
26
N
sing
Y
27
N
doub
N
28
N
sing
Y
29
N
sing
Y
30
N
sing
Y
31
N
doub
N
32
N
sing
Y
33
N
doub
N
34
N
sing
N
35
N
sing
Y
36
N
sing
Y
37
N
doub
N
38
N
sing
Y
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
doub
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
doub
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
doub
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
doub
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
doub
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
Y
169
N
sing
Y
170
N
sing
Y
171
N
doub
N
172
N
sing
Y
173
N
sing
N
174
N
sing
Y
175
N
doub
N
176
N
doub
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
doub
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
doub
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
doub
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
doub
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
doub
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
Y
242
N
sing
Y
243
N
doub
Y
244
N
doub
N
245
N
sing
Y
246
N
sing
N
247
N
sing
Y
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
doub
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
doub
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
doub
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
doub
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
doub
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
Y
358
N
doub
Y
359
N
sing
Y
360
N
sing
N
361
N
sing
Y
362
N
doub
N
363
N
sing
Y
364
N
doub
N
365
N
sing
Y
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
doub
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
doub
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
doub
N
401
N
doub
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
doub
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
doub
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
Y
431
N
doub
Y
432
N
sing
Y
433
N
sing
N
434
N
sing
Y
435
N
doub
Y
436
N
sing
Y
437
N
sing
N
438
N
sing
Y
439
N
sing
Y
440
N
doub
N
441
N
sing
Y
442
N
doub
N
443
N
sing
Y
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
doub
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
Y
459
N
doub
Y
460
N
sing
Y
461
N
sing
N
462
N
sing
Y
463
N
doub
N
464
N
sing
Y
465
N
doub
N
466
N
sing
Y
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
doub
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
doub
N
499
N
sing
N
500
N
sing
N
501
N
sing
N
502
N
doub
N
503
N
sing
N
504
N
doub
N
505
N
sing
N
506
N
sing
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
N
512
N
sing
N
513
N
doub
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
N
523
N
sing
N
524
N
sing
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
68
1051
1057
10.1107/S0907444912020136
22868771
High-resolution crystal structure of the isolated ribosomal L1 stalk.
2012
10.2210/pdb3u4m/pdb
pdb_00003u4m
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
110
1
CCD
2010-12-18
Bruker Platinum 135
Montel 200
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
BRUKER AXS MICROSTAR
24867.699
50S ribosomal protein L1
V218R
1
man
polymer
fragment of 23S rRNA
25974.475
RNA (80-MER)
1
man
polymer
96.063
SULFATE ION
2
syn
non-polymer
102.046
MALONATE ION
7
syn
non-polymer
24.305
MAGNESIUM ION
5
syn
non-polymer
35.453
CHLORIDE ION
2
syn
non-polymer
22.990
SODIUM ION
5
syn
non-polymer
18.015
water
203
nat
water
no
no
MPKHGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAK
GEKIKEAEEAGADYVGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAG
RIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTMGPSVRINPHS
MPKHGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAK
GEKIKEAEEAGADYVGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAG
RIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTMGPSVRINPHS
A
polypeptide(L)
no
no
GGGAUGCGUAGGAUAGGUGGGAGCCUGUGAACCCCCGCCUCCGGGUGGGGGGGAGGCGCCGGUGAAAUACCACCCUUCCC
GGGAUGCGUAGGAUAGGUGGGAGCCUGUGAACCCCCGCCUCCGGGUGGGGGGGAGGCGCCGGUGAAAUACCACCCUUCCC
B
polyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
rplA, rpl1
274
Thermus thermophilus
469008
Escherichia coli
BL11(DE3)
PLASMID
pET11a-PL/TthL1
sample
274
Thermus thermophilus
469008
Escherichia coli
BL11(DE3)
PLASMID
pUC18/rRNATth
1
2.49
50.63
VAPOR DIFFUSION, HANGING DROP
5.6
50mM NaCl, 2.5M Ammonium sulfate, 50mM MES, 10mM Magnesium acetate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 295K
295
-19.159
1
19
B
2105
B
2184
1.374
B_G2105:C2184_B
1
-0.180
-0.542
-0.072
-0.046
-1.574
1
19
B
2106
B
2183
0.975
B_G2106:C2183_B
2
-10.352
-0.055
0.288
-0.292
-3.547
1
19
B
2107
B
2182
3.366
B_G2107:C2182_B
3
-11.573
-0.395
-0.033
-0.220
-5.557
1
20
B
2108
B
2181
5.483
B_A2108:U2181_B
4
-17.687
-0.028
-0.230
-0.135
-12.101
1
16
B
2109
B
2180
12.096
B_U2109:U2180_B
5
-17.921
2.389
0.346
-1.741
-0.048
1
19
B
2110
B
2179
1.732
B_G2110:C2179_B
6
-2.464
-0.221
-0.393
-0.228
-6.100
1
19
B
2120
B
2178
-2.315
B_G2120:C2178_B
7
-6.230
-0.289
-0.016
-0.179
-4.114
1
19
B
2121
B
2177
-4.272
B_G2121:C2177_B
8
-12.899
-0.145
0.032
-0.160
6.760
1
20
B
2122
B
2176
7.138
B_U2122:A2176_B
9
-13.444
0.054
0.120
-0.039
3.024
1
19
B
2123
B
2175
2.155
B_G2123:C2175_B
10
-10.291
-0.210
0.042
-0.035
-14.362
1
19
B
2124
B
2174
7.354
B_G2124:C2174_B
11
-21.607
-0.349
-0.348
-0.195
-13.273
10
11
B
2125
B
2173
-8.291
B_G2125:A2173_B
12
-9.045
6.870
0.204
-4.486
49.932
6
B
2126
B
2162
148.670
B_A2126:G2162_B
13
-4.661
2.311
-1.928
7.006
-8.364
1
19
B
2127
B
2161
2.765
B_G2127:C2161_B
14
-5.616
-0.446
-0.285
-0.254
25.713
9
11
B
2133
B
2158
11.348
B_G2133:A2158_B
15
16.344
6.371
0.936
-4.348
-29.635
10
11
B
2134
B
2157
-2.085
B_A2134:G2157_B
16
10.945
-6.476
0.665
-4.746
-2.090
10
11
B
2135
B
2156
-2.080
B_A2135:G2156_B
17
-0.950
-6.897
0.354
-4.413
7.948
1
19
B
2136
B
2155
-0.893
B_C2136:G2155_B
18
-2.661
0.132
0.015
-0.175
10.695
1
19
B
2137
B
2154
8.958
B_C2137:G2154_B
19
-3.480
0.314
-0.277
0.038
11.963
1
19
B
2138
B
2153
3.771
B_C2138:G2153_B
20
-11.463
0.489
-0.189
-0.147
3.608
1
19
B
2139
B
2152
0.050
B_C2139:G2152_B
21
-5.773
0.168
-0.133
-0.191
3.959
1
19
B
2140
B
2151
3.950
B_C2140:G2151_B
22
-3.428
0.337
-0.147
-0.020
4.915
1
28
B
2141
B
2150
-2.490
B_G2141:U2150_B
23
-12.885
-2.329
0.264
-0.604
10.158
1
19
B
2142
B
2149
-1.817
B_C2142:G2149_B
24
-18.257
0.257
0.042
-0.191
-3.740
1
19
B
2143
B
2148
1.268
B_C2143:G2148_B
25
-5.446
0.252
0.235
-0.179
-3.367
B
2111
B
2147
-71.520
B_C2111:G2147_B
26
17.369
-0.505
0.250
3.466
-27.848
B
2112
B
2169
-166.691
B_G2112:A2169_B
27
-6.195
-3.492
-0.344
5.548
-23.336
B
2113
B
2170
-159.134
B_U2113:A2170_B
28
5.026
-0.292
-0.511
4.158
-30.875
6
10
B
2119
B
2168
72.227
B_A2119:G2168_B
29
2.826
-3.392
0.364
3.946
-5.698
4
24
B
2171
B
2167
-93.795
B_A2171:U2167_B
30
6.056
-4.203
0.469
-2.190
-1.425
1
20
B
2172
B
2117
-0.157
B_U2172:A2117_B
31
-8.229
-0.094
-0.059
-0.125
-2.975
B
2166
B
2116
-49.434
B_G2166:G2116_B
32
-14.185
3.958
2.309
3.816
-4.141
1
19
B
2128
B
2160
1.393
B_C2128:G2160_B
33
1.961
0.129
-0.001
-0.213
1.140
1
19
B
2129
B
2159
2.176
B_C2129:G2159_B
34
1.399
0.395
-0.034
-0.118
2.709
32.834
B
B
2105
2106
6.594
B
B
2184
2183
2.901
3.716
-0.071
-1.559
BB_G2105G2106:C2183C2184_BB
1
-2.467
4.378
32.538
-3.307
-0.240
3.122
27.104
B
B
2106
2107
9.048
B
B
2183
2182
3.355
4.193
0.793
-1.873
BB_G2106G2107:C2182C2183_BB
2
5.704
-12.309
26.180
-5.064
-0.238
3.071
27.631
B
B
2107
2108
10.531
B
B
2182
2181
3.366
4.992
0.706
-1.687
BB_G2107A2108:U2181C2182_BB
3
3.116
-6.573
27.009
-4.740
-0.725
3.345
48.143
B
B
2108
2109
4.773
B
B
2181
2180
3.449
3.889
0.474
-0.997
BB_A2108U2109:U2180U2181_BB
4
-1.756
2.155
47.965
-1.539
-0.724
0.558
26.690
B
B
2109
2110
38.926
B
B
2180
2179
2.705
16.045
-0.320
-1.939
BB_U2109G2110:C2179U2180_BB
5
11.346
-27.525
18.151
-6.704
2.462
3.549
31.242
B
B
2110
2120
-1.530
B
B
2179
2178
3.496
-0.823
-0.305
-1.593
BB_G2110G2120:C2178C2179_BB
6
-2.998
5.576
31.090
-2.790
-0.047
3.014
28.120
B
B
2120
2121
6.385
B
B
2178
2177
3.246
3.096
-1.095
-2.287
BB_G2120G2121:C2177C2178_BB
7
-0.931
1.921
27.937
-5.405
2.044
3.046
31.937
B
B
2121
2122
6.393
B
B
2177
2176
3.144
3.511
0.712
-0.734
BB_G2121U2122:A2176C2177_BB
8
-0.050
0.091
31.749
-1.938
-1.302
2.444
33.511
B
B
2122
2123
20.739
B
B
2176
2175
3.181
11.712
-0.158
-1.616
BB_U2122G2123:C2175A2176_BB
9
-2.026
3.588
31.389
-4.517
-0.023
2.683
30.377
B
B
2123
2124
23.200
B
B
2175
2174
3.712
11.840
0.173
-1.965
BB_G2123G2124:C2174C2175_BB
10
1.869
-3.662
27.963
-6.175
0.053
3.330
67.309
B
B
2124
2125
9.499
B
B
2174
2173
3.443
10.495
-0.841
-0.517
BB_G2124G2125:A2173C2174_BB
11
0.737
-0.667
66.578
-0.890
0.789
4.931
-99.309
B
B
2125
2126
-20.373
B
B
2173
2162
4.128
30.772
-4.390
-3.810
BB_G2125A2126:G2162A2173_BB
12
0.788
0.522
-95.638
1.795
-2.862
3.336
160.248
B
B
2126
2127
-64.849
B
B
2162
2161
3.156
-123.482
-2.119
-3.294
BB_A2126G2127:C2161G2162_BB
13
86.590
-45.475
94.187
-0.637
1.801
0.303
-14.455
B
B
2133
2134
59.119
B
B
2158
2157
4.708
-12.144
-1.517
-1.771
BB_G2133A2134:G2157A2158_BB
14
-3.989
-19.420
-6.764
18.415
-9.766
3.026
32.561
B
B
2134
2135
9.294
B
B
2157
2156
3.127
5.077
-0.627
-0.539
BB_A2134A2135:G2156G2157_BB
15
-11.774
21.553
29.993
-1.831
-0.898
3.022
65.178
B
B
2135
2136
6.547
B
B
2156
2155
3.118
7.040
0.080
-0.790
BB_A2135C2136:G2155G2156_BB
16
-2.882
2.680
64.782
-1.008
-0.187
2.555
26.556
B
B
2136
2137
14.508
B
B
2155
2154
3.136
6.596
0.151
-2.000
BB_C2136C2137:G2154G2155_BB
17
0.575
-1.265
25.731
-5.890
-0.196
2.958
34.916
B
B
2137
2138
9.539
B
B
2154
2153
3.238
5.697
-0.509
-1.641
BB_C2137C2138:G2153G2154_BB
18
-1.701
2.849
34.421
-3.557
0.602
2.796
30.642
B
B
2138
2139
15.292
B
B
2153
2152
3.400
7.989
-0.598
-2.021
BB_C2138C2139:G2152G2153_BB
19
-1.431
2.739
29.573
-5.344
0.859
2.751
29.650
B
B
2139
2140
12.972
B
B
2152
2151
3.238
6.585
0.253
-1.882
BB_C2139C2140:G2151G2152_BB
20
-0.091
0.180
28.926
-4.964
-0.513
2.259
23.065
B
B
2140
2141
19.147
B
B
2151
2150
3.016
7.482
-0.432
-1.951
BB_C2140G2141:U2150G2151_BB
21
-3.948
10.104
21.477
-7.068
-0.075
2.982
43.122
B
B
2141
2142
3.523
B
B
2150
2149
3.049
2.587
0.010
-1.074
BB_G2141C2142:G2149U2150_BB
22
0.977
-1.330
43.038
-1.695
0.075
3.138
33.582
B
B
2142
2143
11.930
B
B
2149
2148
3.605
6.841
0.329
-1.827
BB_C2142C2143:G2148G2149_BB
23
-2.469
4.305
32.807
-4.331
-0.992
3.383
103.536
B
B
2143
2111
4.031
B
B
2148
2147
3.109
6.328
-4.811
1.148
BB_C2143C2111:G2147G2148_BB
24
-6.961
4.434
103.231
0.641
2.963
3.411
50.930
B
B
2112
2113
5.064
B
B
2169
2170
3.497
4.346
-0.043
-0.779
BB_G2112U2113:A2170A2169_BB
25
4.006
-4.667
50.608
-1.227
0.346
4.549
169.947
B
B
2113
2119
-74.072
B
B
2170
2168
4.742
-140.700
0.794
-5.422
BB_U2113A2119:G2168A2170_BB
26
-95.206
50.122
12.762
0.732
-2.735
-1.746
174.861
B
B
2119
2171
-23.722
B
B
2168
2167
-3.029
-46.491
-1.554
-2.834
BB_A2119A2171:U2167G2168_BB
27
168.216
-85.833
40.508
-1.862
-0.827
3.498
-22.734
B
B
2171
2172
6.891
B
B
2167
2117
3.458
-2.705
-2.092
-1.201
BB_A2171U2172:A2117U2167_BB
28
2.483
6.325
-22.439
4.090
-4.351
-2.409
-163.591
B
B
2172
2166
-49.487
B
B
2117
2116
-2.236
94.355
0.006
2.151
BB_U2172G2166:G2116A2117_BB
29
127.828
67.043
-77.718
-0.427
-0.891
2.693
29.798
B
B
2128
2129
11.261
B
B
2160
2159
3.144
5.756
-0.013
-2.084
BB_C2128C2129:G2159G2160_BB
30
0.212
-0.415
29.248
-5.135
0.065
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Database references
Data collection
Database references
Derived calculations
Refinement description
1
0
2012-08-08
1
1
2013-01-23
1
2
2023-09-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
THE STRUCTURE OF A RIBOSOMAL PROTEIN L1-mRNA COMPLEX
THE STRUCTURE OF THE COMPLEX BETWEEN THE FIRST DOMAIN OF L1 PROTEIN FROM THERMUS THERMOPHILUS AND MRNA FROM METHANOCOCCUS JANNASCHII
Structure of ribosomal protein L1-mRNA complex at 2.1 resolution.
The structure of a ribosomal protein L1 in complex with mRNA
Structure of the L1 protuberance in the ribosome
RCSB
Y
RCSB
2011-10-10
REL
REL
SO4
SULFATE ION
MLI
MALONATE ION
MG
MAGNESIUM ION
CL
CHLORIDE ION
NA
SODIUM ION
HOH
water
1AD2
pdb entries 1AD2, 1MZP
PDB
experimental model
1MZP
pdb entries 1AD2, 1MZP
PDB
experimental model
SO4
2
3
SO4
SO4
301
A
MLI
3
4
MLI
MLI
302
A
MLI
7
4
MLI
MLI
303
A
MLI
8
4
MLI
MLI
304
A
MG
4
5
MG
MG
305
A
CL
1
6
CL
CL
306
A
CL
2
6
CL
CL
307
A
NA
2
7
NA
NA
308
A
NA
3
7
NA
NA
309
A
NA
4
7
NA
NA
310
A
NA
239
7
NA
NA
311
A
SO4
1
3
SO4
SO4
2201
B
MLI
4
4
MLI
MLI
2202
B
MLI
5
4
MLI
MLI
2203
B
MLI
6
4
MLI
MLI
2204
B
MLI
9
4
MLI
MLI
2205
B
MG
1
5
MG
MG
2206
B
MG
3
5
MG
MG
2207
B
MG
5
5
MG
MG
2208
B
MG
6
5
MG
MG
2209
B
NA
1
7
NA
NA
2210
B
HOH
10
8
HOH
HOH
401
A
HOH
11
8
HOH
HOH
402
A
HOH
13
8
HOH
HOH
403
A
HOH
14
8
HOH
HOH
404
A
HOH
19
8
HOH
HOH
405
A
HOH
20
8
HOH
HOH
406
A
HOH
24
8
HOH
HOH
407
A
HOH
29
8
HOH
HOH
408
A
HOH
30
8
HOH
HOH
409
A
HOH
31
8
HOH
HOH
410
A
HOH
32
8
HOH
HOH
411
A
HOH
33
8
HOH
HOH
412
A
HOH
34
8
HOH
HOH
413
A
HOH
35
8
HOH
HOH
414
A
HOH
36
8
HOH
HOH
415
A
HOH
37
8
HOH
HOH
416
A
HOH
41
8
HOH
HOH
417
A
HOH
47
8
HOH
HOH
418
A
HOH
50
8
HOH
HOH
419
A
HOH
54
8
HOH
HOH
420
A
HOH
56
8
HOH
HOH
421
A
HOH
59
8
HOH
HOH
422
A
HOH
63
8
HOH
HOH
423
A
HOH
64
8
HOH
HOH
424
A
HOH
66
8
HOH
HOH
425
A
HOH
73
8
HOH
HOH
426
A
HOH
76
8
HOH
HOH
427
A
HOH
78
8
HOH
HOH
428
A
HOH
79
8
HOH
HOH
429
A
HOH
85
8
HOH
HOH
430
A
HOH
87
8
HOH
HOH
431
A
HOH
88
8
HOH
HOH
432
A
HOH
90
8
HOH
HOH
433
A
HOH
91
8
HOH
HOH
434
A
HOH
92
8
HOH
HOH
435
A
HOH
94
8
HOH
HOH
436
A
HOH
97
8
HOH
HOH
437
A
HOH
99
8
HOH
HOH
438
A
HOH
101
8
HOH
HOH
439
A
HOH
103
8
HOH
HOH
440
A
HOH
104
8
HOH
HOH
441
A
HOH
105
8
HOH
HOH
442
A
HOH
108
8
HOH
HOH
443
A
HOH
110
8
HOH
HOH
444
A
HOH
111
8
HOH
HOH
445
A
HOH
112
8
HOH
HOH
446
A
HOH
113
8
HOH
HOH
447
A
HOH
114
8
HOH
HOH
448
A
HOH
115
8
HOH
HOH
449
A
HOH
116
8
HOH
HOH
450
A
HOH
117
8
HOH
HOH
451
A
HOH
118
8
HOH
HOH
452
A
HOH
119
8
HOH
HOH
453
A
HOH
120
8
HOH
HOH
454
A
HOH
121
8
HOH
HOH
455
A
HOH
122
8
HOH
HOH
456
A
HOH
123
8
HOH
HOH
457
A
HOH
124
8
HOH
HOH
458
A
HOH
125
8
HOH
HOH
459
A
HOH
126
8
HOH
HOH
460
A
HOH
127
8
HOH
HOH
461
A
HOH
128
8
HOH
HOH
462
A
HOH
129
8
HOH
HOH
463
A
HOH
130
8
HOH
HOH
464
A
HOH
131
8
HOH
HOH
465
A
HOH
153
8
HOH
HOH
466
A
HOH
164
8
HOH
HOH
467
A
HOH
165
8
HOH
HOH
468
A
HOH
180
8
HOH
HOH
469
A
HOH
182
8
HOH
HOH
470
A
HOH
183
8
HOH
HOH
471
A
HOH
186
8
HOH
HOH
472
A
HOH
187
8
HOH
HOH
473
A
HOH
188
8
HOH
HOH
474
A
HOH
189
8
HOH
HOH
475
A
HOH
190
8
HOH
HOH
476
A
HOH
191
8
HOH
HOH
477
A
HOH
194
8
HOH
HOH
478
A
HOH
195
8
HOH
HOH
479
A
HOH
1
8
HOH
HOH
2301
B
HOH
2
8
HOH
HOH
2302
B
HOH
93
8
HOH
HOH
2303
B
HOH
3
8
HOH
HOH
2304
B
HOH
95
8
HOH
HOH
2305
B
HOH
96
8
HOH
HOH
2306
B
HOH
4
8
HOH
HOH
2307
B
HOH
98
8
HOH
HOH
2308
B
HOH
5
8
HOH
HOH
2309
B
HOH
100
8
HOH
HOH
2310
B
HOH
6
8
HOH
HOH
2311
B
HOH
102
8
HOH
HOH
2312
B
HOH
7
8
HOH
HOH
2313
B
HOH
8
8
HOH
HOH
2314
B
HOH
9
8
HOH
HOH
2315
B
HOH
106
8
HOH
HOH
2316
B
HOH
107
8
HOH
HOH
2317
B
HOH
15
8
HOH
HOH
2318
B
HOH
109
8
HOH
HOH
2319
B
HOH
17
8
HOH
HOH
2320
B
HOH
18
8
HOH
HOH
2321
B
HOH
21
8
HOH
HOH
2322
B
HOH
22
8
HOH
HOH
2323
B
HOH
23
8
HOH
HOH
2324
B
HOH
25
8
HOH
HOH
2325
B
HOH
26
8
HOH
HOH
2326
B
HOH
27
8
HOH
HOH
2327
B
HOH
28
8
HOH
HOH
2328
B
HOH
38
8
HOH
HOH
2329
B
HOH
39
8
HOH
HOH
2330
B
HOH
40
8
HOH
HOH
2331
B
HOH
42
8
HOH
HOH
2332
B
HOH
43
8
HOH
HOH
2333
B
HOH
44
8
HOH
HOH
2334
B
HOH
45
8
HOH
HOH
2335
B
HOH
46
8
HOH
HOH
2336
B
HOH
48
8
HOH
HOH
2337
B
HOH
49
8
HOH
HOH
2338
B
HOH
51
8
HOH
HOH
2339
B
HOH
52
8
HOH
HOH
2340
B
HOH
53
8
HOH
HOH
2341
B
HOH
132
8
HOH
HOH
2342
B
HOH
133
8
HOH
HOH
2343
B
HOH
134
8
HOH
HOH
2344
B
HOH
135
8
HOH
HOH
2345
B
HOH
136
8
HOH
HOH
2346
B
HOH
137
8
HOH
HOH
2347
B
HOH
138
8
HOH
HOH
2348
B
HOH
139
8
HOH
HOH
2349
B
HOH
140
8
HOH
HOH
2350
B
HOH
141
8
HOH
HOH
2351
B
HOH
142
8
HOH
HOH
2352
B
HOH
143
8
HOH
HOH
2353
B
HOH
144
8
HOH
HOH
2354
B
HOH
145
8
HOH
HOH
2355
B
HOH
146
8
HOH
HOH
2356
B
HOH
147
8
HOH
HOH
2357
B
HOH
148
8
HOH
HOH
2358
B
HOH
149
8
HOH
HOH
2359
B
HOH
150
8
HOH
HOH
2360
B
HOH
151
8
HOH
HOH
2361
B
HOH
152
8
HOH
HOH
2362
B
HOH
55
8
HOH
HOH
2363
B
HOH
154
8
HOH
HOH
2364
B
HOH
155
8
HOH
HOH
2365
B
HOH
57
8
HOH
HOH
2366
B
HOH
157
8
HOH
HOH
2367
B
HOH
158
8
HOH
HOH
2368
B
HOH
159
8
HOH
HOH
2369
B
HOH
160
8
HOH
HOH
2370
B
HOH
161
8
HOH
HOH
2371
B
HOH
162
8
HOH
HOH
2372
B
HOH
163
8
HOH
HOH
2373
B
HOH
58
8
HOH
HOH
2374
B
HOH
60
8
HOH
HOH
2375
B
HOH
166
8
HOH
HOH
2376
B
HOH
167
8
HOH
HOH
2377
B
HOH
168
8
HOH
HOH
2378
B
HOH
169
8
HOH
HOH
2379
B
HOH
170
8
HOH
HOH
2380
B
HOH
171
8
HOH
HOH
2381
B
HOH
172
8
HOH
HOH
2382
B
HOH
173
8
HOH
HOH
2383
B
HOH
174
8
HOH
HOH
2384
B
HOH
175
8
HOH
HOH
2385
B
HOH
176
8
HOH
HOH
2386
B
HOH
177
8
HOH
HOH
2387
B
HOH
178
8
HOH
HOH
2388
B
HOH
179
8
HOH
HOH
2389
B
HOH
62
8
HOH
HOH
2390
B
HOH
181
8
HOH
HOH
2391
B
HOH
65
8
HOH
HOH
2392
B
HOH
67
8
HOH
HOH
2393
B
HOH
184
8
HOH
HOH
2394
B
HOH
185
8
HOH
HOH
2395
B
HOH
68
8
HOH
HOH
2396
B
HOH
69
8
HOH
HOH
2397
B
HOH
70
8
HOH
HOH
2398
B
HOH
71
8
HOH
HOH
2399
B
HOH
72
8
HOH
HOH
2400
B
HOH
75
8
HOH
HOH
2401
B
HOH
192
8
HOH
HOH
2402
B
HOH
193
8
HOH
HOH
2403
B
HOH
77
8
HOH
HOH
2404
B
HOH
80
8
HOH
HOH
2405
B
HOH
196
8
HOH
HOH
2406
B
HOH
197
8
HOH
HOH
2407
B
HOH
198
8
HOH
HOH
2408
B
HOH
199
8
HOH
HOH
2409
B
HOH
200
8
HOH
HOH
2410
B
HOH
201
8
HOH
HOH
2411
B
HOH
202
8
HOH
HOH
2412
B
HOH
203
8
HOH
HOH
2413
B
HOH
204
8
HOH
HOH
2414
B
HOH
205
8
HOH
HOH
2415
B
HOH
206
8
HOH
HOH
2416
B
HOH
207
8
HOH
HOH
2417
B
HOH
208
8
HOH
HOH
2418
B
HOH
81
8
HOH
HOH
2419
B
HOH
82
8
HOH
HOH
2420
B
HOH
83
8
HOH
HOH
2421
B
HOH
84
8
HOH
HOH
2422
B
HOH
86
8
HOH
HOH
2423
B
HOH
89
8
HOH
HOH
2424
B
n
1
0
A
PRO
1
n
2
PRO
1
A
LYS
2
n
3
LYS
2
A
HIS
3
n
4
HIS
3
A
GLY
4
n
5
GLY
4
A
LYS
5
n
6
LYS
5
A
ARG
6
n
7
ARG
6
A
TYR
7
n
8
TYR
7
A
ARG
8
n
9
ARG
8
A
ALA
9
n
10
ALA
9
A
LEU
10
n
11
LEU
10
A
LEU
11
n
12
LEU
11
A
GLU
12
n
13
GLU
12
A
LYS
13
n
14
LYS
13
A
VAL
14
n
15
VAL
14
A
ASP
15
n
16
ASP
15
A
PRO
16
n
17
PRO
16
A
ASN
17
n
18
ASN
17
A
LYS
18
n
19
LYS
18
A
ILE
19
n
20
ILE
19
A
TYR
20
n
21
TYR
20
A
THR
21
n
22
THR
21
A
ILE
22
n
23
ILE
22
A
ASP
23
n
24
ASP
23
A
GLU
24
n
25
GLU
24
A
ALA
25
n
26
ALA
25
A
ALA
26
n
27
ALA
26
A
HIS
27
n
28
HIS
27
A
LEU
28
n
29
LEU
28
A
VAL
29
n
30
VAL
29
A
LYS
30
n
31
LYS
30
A
GLU
31
n
32
GLU
31
A
LEU
32
n
33
LEU
32
A
ALA
33
n
34
ALA
33
A
THR
34
n
35
THR
34
A
ALA
35
n
36
ALA
35
A
LYS
36
n
37
LYS
36
A
PHE
37
n
38
PHE
37
A
ASP
38
n
39
ASP
38
A
GLU
39
n
40
GLU
39
A
THR
40
n
41
THR
40
A
VAL
41
n
42
VAL
41
A
GLU
42
n
43
GLU
42
A
VAL
43
n
44
VAL
43
A
HIS
44
n
45
HIS
44
A
ALA
45
n
46
ALA
45
A
LYS
46
n
47
LYS
46
A
LEU
47
n
48
LEU
47
A
GLY
48
n
49
GLY
48
A
ILE
49
n
50
ILE
49
A
ASP
50
n
51
ASP
50
A
PRO
51
n
52
PRO
51
A
ARG
52
n
53
ARG
52
A
ARG
53
n
54
ARG
53
A
SER
54
n
55
SER
54
A
ASP
55
n
56
ASP
55
A
GLN
56
n
57
GLN
56
A
ASN
57
n
58
ASN
57
A
VAL
58
n
59
VAL
58
A
ARG
59
n
60
ARG
59
A
GLY
60
n
61
GLY
60
A
THR
61
n
62
THR
61
A
VAL
62
n
63
VAL
62
A
SER
63
n
64
SER
63
A
LEU
64
n
65
LEU
64
A
PRO
65
n
66
PRO
65
A
HIS
66
n
67
HIS
66
A
GLY
67
n
68
GLY
67
A
LEU
68
n
69
LEU
68
A
GLY
69
n
70
GLY
69
A
LYS
70
n
71
LYS
70
A
GLN
71
n
72
GLN
71
A
VAL
72
n
73
VAL
72
A
ARG
73
n
74
ARG
73
A
VAL
74
n
75
VAL
74
A
LEU
75
n
76
LEU
75
A
ALA
76
n
77
ALA
76
A
ILE
77
n
78
ILE
77
A
ALA
78
n
79
ALA
78
A
LYS
79
n
80
LYS
79
A
GLY
80
n
81
GLY
80
A
GLU
81
n
82
GLU
81
A
LYS
82
n
83
LYS
82
A
ILE
83
n
84
ILE
83
A
LYS
84
n
85
LYS
84
A
GLU
85
n
86
GLU
85
A
ALA
86
n
87
ALA
86
A
GLU
87
n
88
GLU
87
A
GLU
88
n
89
GLU
88
A
ALA
89
n
90
ALA
89
A
GLY
90
n
91
GLY
90
A
ALA
91
n
92
ALA
91
A
ASP
92
n
93
ASP
92
A
TYR
93
n
94
TYR
93
A
VAL
94
n
95
VAL
94
A
GLY
95
n
96
GLY
95
A
GLY
96
n
97
GLY
96
A
GLU
97
n
98
GLU
97
A
GLU
98
n
99
GLU
98
A
ILE
99
n
100
ILE
99
A
ILE
100
n
101
ILE
100
A
GLN
101
n
102
GLN
101
A
LYS
102
n
103
LYS
102
A
ILE
103
n
104
ILE
103
A
LEU
104
n
105
LEU
104
A
ASP
105
n
106
ASP
105
A
GLY
106
n
107
GLY
106
A
TRP
107
n
108
TRP
107
A
MET
108
n
109
MET
108
A
ASP
109
n
110
ASP
109
A
PHE
110
n
111
PHE
110
A
ASP
111
n
112
ASP
111
A
ALA
112
n
113
ALA
112
A
VAL
113
n
114
VAL
113
A
VAL
114
n
115
VAL
114
A
ALA
115
n
116
ALA
115
A
THR
116
n
117
THR
116
A
PRO
117
n
118
PRO
117
A
ASP
118
n
119
ASP
118
A
VAL
119
n
120
VAL
119
A
MET
120
n
121
MET
120
A
GLY
121
n
122
GLY
121
A
ALA
122
n
123
ALA
122
A
VAL
123
n
124
VAL
123
A
GLY
124
n
125
GLY
124
A
SER
125
n
126
SER
125
A
LYS
126
n
127
LYS
126
A
LEU
127
n
128
LEU
127
A
GLY
128
n
129
GLY
128
A
ARG
129
n
130
ARG
129
A
ILE
130
n
131
ILE
130
A
LEU
131
n
132
LEU
131
A
GLY
132
n
133
GLY
132
A
PRO
133
n
134
PRO
133
A
ARG
134
n
135
ARG
134
A
GLY
135
n
136
GLY
135
A
LEU
136
n
137
LEU
136
A
LEU
137
n
138
LEU
137
A
PRO
138
n
139
PRO
138
A
ASN
139
n
140
ASN
139
A
PRO
140
n
141
PRO
140
A
LYS
141
n
142
LYS
141
A
ALA
142
n
143
ALA
142
A
GLY
143
n
144
GLY
143
A
THR
144
n
145
THR
144
A
VAL
145
n
146
VAL
145
A
GLY
146
n
147
GLY
146
A
PHE
147
n
148
PHE
147
A
ASN
148
n
149
ASN
148
A
ILE
149
n
150
ILE
149
A
GLY
150
n
151
GLY
150
A
GLU
151
n
152
GLU
151
A
ILE
152
n
153
ILE
152
A
ILE
153
n
154
ILE
153
A
ARG
154
n
155
ARG
154
A
GLU
155
n
156
GLU
155
A
ILE
156
n
157
ILE
156
A
LYS
157
n
158
LYS
157
A
ALA
158
n
159
ALA
158
A
GLY
159
n
160
GLY
159
A
ARG
160
n
161
ARG
160
A
ILE
161
n
162
ILE
161
A
GLU
162
n
163
GLU
162
A
PHE
163
n
164
PHE
163
A
ARG
164
n
165
ARG
164
A
ASN
165
n
166
ASN
165
A
ASP
166
n
167
ASP
166
A
LYS
167
n
168
LYS
167
A
THR
168
n
169
THR
168
A
GLY
169
n
170
GLY
169
A
ALA
170
n
171
ALA
170
A
ILE
171
n
172
ILE
171
A
HIS
172
n
173
HIS
172
A
ALA
173
n
174
ALA
173
A
PRO
174
n
175
PRO
174
A
VAL
175
n
176
VAL
175
A
GLY
176
n
177
GLY
176
A
LYS
177
n
178
LYS
177
A
ALA
178
n
179
ALA
178
A
SER
179
n
180
SER
179
A
PHE
180
n
181
PHE
180
A
PRO
181
n
182
PRO
181
A
PRO
182
n
183
PRO
182
A
GLU
183
n
184
GLU
183
A
LYS
184
n
185
LYS
184
A
LEU
185
n
186
LEU
185
A
ALA
186
n
187
ALA
186
A
ASP
187
n
188
ASP
187
A
ASN
188
n
189
ASN
188
A
ILE
189
n
190
ILE
189
A
ARG
190
n
191
ARG
190
A
ALA
191
n
192
ALA
191
A
PHE
192
n
193
PHE
192
A
ILE
193
n
194
ILE
193
A
ARG
194
n
195
ARG
194
A
ALA
195
n
196
ALA
195
A
LEU
196
n
197
LEU
196
A
GLU
197
n
198
GLU
197
A
ALA
198
n
199
ALA
198
A
HIS
199
n
200
HIS
199
A
LYS
200
n
201
LYS
200
A
PRO
201
n
202
PRO
201
A
GLU
202
n
203
GLU
202
A
GLY
203
n
204
GLY
203
A
ALA
204
n
205
ALA
204
A
LYS
205
n
206
LYS
205
A
GLY
206
n
207
GLY
206
A
THR
207
n
208
THR
207
A
PHE
208
n
209
PHE
208
A
LEU
209
n
210
LEU
209
A
ARG
210
n
211
ARG
210
A
SER
211
n
212
SER
211
A
VAL
212
n
213
VAL
212
A
TYR
213
n
214
TYR
213
A
VAL
214
n
215
VAL
214
A
THR
215
n
216
THR
215
A
THR
216
n
217
THR
216
A
THR
217
n
218
THR
217
A
MET
218
n
219
MET
218
A
GLY
219
n
220
GLY
219
A
PRO
220
n
221
PRO
220
A
SER
221
n
222
SER
221
A
VAL
222
n
223
VAL
222
A
ARG
223
n
224
ARG
223
A
ILE
224
n
225
ILE
224
A
ASN
225
n
226
ASN
225
A
PRO
226
n
227
PRO
226
A
HIS
227
n
228
HIS
227
A
SER
228
n
229
SER
228
A
G
1
n
1
G
2105
B
G
2
n
2
G
2106
B
G
3
n
3
G
2107
B
A
4
n
4
A
2108
B
U
5
n
5
U
2109
B
G
6
n
6
G
2110
B
C
7
n
7
C
2111
B
G
8
n
8
G
2112
B
U
9
n
9
U
2113
B
A
10
n
10
A
2114
B
G
11
n
11
G
2115
B
G
12
n
12
G
2116
B
A
13
n
13
A
2117
B
U
14
n
14
U
2118
B
A
15
n
15
A
2119
B
G
16
n
16
G
2120
B
G
17
n
17
G
2121
B
U
18
n
18
U
2122
B
G
19
n
19
G
2123
B
G
20
n
20
G
2124
B
G
21
n
21
G
2125
B
A
22
n
22
A
2126
B
G
23
n
23
G
2127
B
C
24
n
24
C
2128
B
C
25
n
25
C
2129
B
U
26
n
26
U
2130
B
G
27
n
27
G
2131
B
U
28
n
28
U
2132
B
G
29
n
29
G
2133
B
A
30
n
30
A
2134
B
A
31
n
31
A
2135
B
C
32
n
32
C
2136
B
C
33
n
33
C
2137
B
C
34
n
34
C
2138
B
C
35
n
35
C
2139
B
C
36
n
36
C
2140
B
G
37
n
37
G
2141
B
C
38
n
38
C
2142
B
C
39
n
39
C
2143
B
U
40
n
40
U
2144
B
C
41
n
41
C
2145
B
C
42
n
42
C
2146
B
G
43
n
43
G
2147
B
G
44
n
44
G
2148
B
G
45
n
45
G
2149
B
U
46
n
46
U
2150
B
G
47
n
47
G
2151
B
G
48
n
48
G
2152
B
G
49
n
49
G
2153
B
G
50
n
50
G
2154
B
G
51
n
51
G
2155
B
G
52
n
52
G
2156
B
G
53
n
53
G
2157
B
A
54
n
54
A
2158
B
G
55
n
55
G
2159
B
G
56
n
56
G
2160
B
C
57
n
57
C
2161
B
G
58
n
58
G
2162
B
C
59
n
59
C
2163
B
C
60
n
60
C
2164
B
G
61
n
61
G
2165
B
G
62
n
62
G
2166
B
U
63
n
63
U
2167
B
G
64
n
64
G
2168
B
A
65
n
65
A
2169
B
A
66
n
66
A
2170
B
A
67
n
67
A
2171
B
U
68
n
68
U
2172
B
A
69
n
69
A
2173
B
C
70
n
70
C
2174
B
C
71
n
71
C
2175
B
A
72
n
72
A
2176
B
C
73
n
73
C
2177
B
C
74
n
74
C
2178
B
C
75
n
75
C
2179
B
U
76
n
76
U
2180
B
U
77
n
77
U
2181
B
C
78
n
78
C
2182
B
C
79
n
79
C
2183
B
C
80
n
80
C
2184
B
author_and_software_defined_assembly
PISA
2
dimeric
5750
-150
21320
A
ARG
6
A
O
ARG
7
1_555
A
NA
308
J
NA
NA
1_555
A
THR
34
A
OG1
THR
35
1_555
103.7
A
ARG
6
A
O
ARG
7
1_555
A
NA
308
J
NA
NA
1_555
A
HOH
408
X
O
HOH
1_555
133.3
A
THR
34
A
OG1
THR
35
1_555
A
NA
308
J
NA
NA
1_555
A
HOH
408
X
O
HOH
1_555
109.5
A
ARG
6
A
O
ARG
7
1_555
A
NA
308
J
NA
NA
1_555
A
HOH
409
X
O
HOH
1_555
119.8
A
THR
34
A
OG1
THR
35
1_555
A
NA
308
J
NA
NA
1_555
A
HOH
409
X
O
HOH
1_555
89.1
A
HOH
408
X
O
HOH
1_555
A
NA
308
J
NA
NA
1_555
A
HOH
409
X
O
HOH
1_555
93.0
A
LEU
32
A
O
LEU
33
1_555
A
NA
309
K
NA
NA
1_555
A
GLU
39
A
OE2
GLU
40
1_555
95.7
A
ALA
33
A
O
ALA
34
1_555
A
MG
305
G
MG
MG
1_555
A
ALA
35
A
O
ALA
36
1_555
107.5
A
ALA
33
A
O
ALA
34
1_555
A
MG
305
G
MG
MG
1_555
A
PHE
37
A
O
PHE
38
1_555
163.5
A
ALA
35
A
O
ALA
36
1_555
A
MG
305
G
MG
MG
1_555
A
PHE
37
A
O
PHE
38
1_555
88.1
A
ALA
33
A
O
ALA
34
1_555
A
MG
305
G
MG
MG
1_555
A
GLU
39
A
OE1
GLU
40
1_555
74.9
A
ALA
35
A
O
ALA
36
1_555
A
MG
305
G
MG
MG
1_555
A
GLU
39
A
OE1
GLU
40
1_555
93.0
A
PHE
37
A
O
PHE
38
1_555
A
MG
305
G
MG
MG
1_555
A
GLU
39
A
OE1
GLU
40
1_555
110.4
A
ALA
33
A
O
ALA
34
1_555
A
MG
305
G
MG
MG
1_555
A
MLI
302
D
O7
MLI
1_555
78.5
A
ALA
35
A
O
ALA
36
1_555
A
MG
305
G
MG
MG
1_555
A
MLI
302
D
O7
MLI
1_555
94.1
A
PHE
37
A
O
PHE
38
1_555
A
MG
305
G
MG
MG
1_555
A
MLI
302
D
O7
MLI
1_555
95.4
A
GLU
39
A
OE1
GLU
40
1_555
A
MG
305
G
MG
MG
1_555
A
MLI
302
D
O7
MLI
1_555
153.4
A
ALA
33
A
O
ALA
34
1_555
A
MG
305
G
MG
MG
1_555
A
MLI
302
D
O8
MLI
1_555
83.9
A
ALA
35
A
O
ALA
36
1_555
A
MG
305
G
MG
MG
1_555
A
MLI
302
D
O8
MLI
1_555
161.7
A
PHE
37
A
O
PHE
38
1_555
A
MG
305
G
MG
MG
1_555
A
MLI
302
D
O8
MLI
1_555
79.7
A
GLU
39
A
OE1
GLU
40
1_555
A
MG
305
G
MG
MG
1_555
A
MLI
302
D
O8
MLI
1_555
103.9
A
MLI
302
D
O7
MLI
1_555
A
MG
305
G
MG
MG
1_555
A
MLI
302
D
O8
MLI
1_555
73.8
A
GLU
42
A
OE2
GLU
43
1_555
A
NA
311
M
NA
NA
1_555
A
GLU
42
A
OE1
GLU
43
1_555
42.9
A
GLU
42
A
OE2
GLU
43
1_555
A
NA
311
M
NA
NA
1_555
A
THR
216
A
O
THR
217
1_555
81.8
A
GLU
42
A
OE1
GLU
43
1_555
A
NA
311
M
NA
NA
1_555
A
THR
216
A
O
THR
217
1_555
109.4
A
GLU
42
A
OE2
GLU
43
1_555
A
NA
311
M
NA
NA
1_555
B
C
2175
B
O2
C
71
1_555
105.6
A
GLU
42
A
OE1
GLU
43
1_555
A
NA
311
M
NA
NA
1_555
B
C
2175
B
O2
C
71
1_555
107.7
A
THR
216
A
O
THR
217
1_555
A
NA
311
M
NA
NA
1_555
B
C
2175
B
O2
C
71
1_555
130.8
A
GLU
42
A
OE2
GLU
43
1_555
A
NA
311
M
NA
NA
1_555
B
C
2175
B
O2'
C
71
1_555
149.0
A
GLU
42
A
OE1
GLU
43
1_555
A
NA
311
M
NA
NA
1_555
B
C
2175
B
O2'
C
71
1_555
167.1
A
THR
216
A
O
THR
217
1_555
A
NA
311
M
NA
NA
1_555
B
C
2175
B
O2'
C
71
1_555
75.0
B
C
2175
B
O2
C
71
1_555
A
NA
311
M
NA
NA
1_555
B
C
2175
B
O2'
C
71
1_555
76.0
A
GLU
42
A
OE2
GLU
43
1_555
A
NA
311
M
NA
NA
1_555
B
A
2176
B
O4'
A
72
1_555
134.1
A
GLU
42
A
OE1
GLU
43
1_555
A
NA
311
M
NA
NA
1_555
B
A
2176
B
O4'
A
72
1_555
91.2
A
THR
216
A
O
THR
217
1_555
A
NA
311
M
NA
NA
1_555
B
A
2176
B
O4'
A
72
1_555
124.7
B
C
2175
B
O2
C
71
1_555
A
NA
311
M
NA
NA
1_555
B
A
2176
B
O4'
A
72
1_555
85.0
B
C
2175
B
O2'
C
71
1_555
A
NA
311
M
NA
NA
1_555
B
A
2176
B
O4'
A
72
1_555
76.7
A
GLU
42
A
OE1
GLU
43
1_555
B
NA
2210
W
NA
NA
1_555
B
G
2123
B
O2'
G
19
1_555
150.7
A
HOH
466
X
O
HOH
1_555
A
NA
310
L
NA
NA
1_555
B
C
2129
B
OP1
C
25
1_555
116.0
A
HOH
466
X
O
HOH
1_555
A
NA
310
L
NA
NA
1_555
B
U
2130
B
OP2
U
26
1_555
100.7
B
C
2129
B
OP1
C
25
1_555
A
NA
310
L
NA
NA
1_555
B
U
2130
B
OP2
U
26
1_555
121.0
B
G
2120
B
OP1
G
16
1_555
B
MG
2208
U
MG
MG
1_555
B
HOH
2304
Y
O
HOH
1_555
101.8
B
G
2120
B
OP1
G
16
1_555
B
MG
2208
U
MG
MG
1_555
B
HOH
2376
Y
O
HOH
1_555
170.9
B
HOH
2304
Y
O
HOH
1_555
B
MG
2208
U
MG
MG
1_555
B
HOH
2376
Y
O
HOH
1_555
86.6
B
G
2120
B
OP1
G
16
1_555
B
MG
2208
U
MG
MG
1_555
B
HOH
2377
Y
O
HOH
1_555
92.0
B
HOH
2304
Y
O
HOH
1_555
B
MG
2208
U
MG
MG
1_555
B
HOH
2377
Y
O
HOH
1_555
162.6
B
HOH
2376
Y
O
HOH
1_555
B
MG
2208
U
MG
MG
1_555
B
HOH
2377
Y
O
HOH
1_555
79.2
B
G
2120
B
OP1
G
16
1_555
B
MG
2208
U
MG
MG
1_555
B
HOH
2378
Y
O
HOH
1_555
115.8
B
HOH
2304
Y
O
HOH
1_555
B
MG
2208
U
MG
MG
1_555
B
HOH
2378
Y
O
HOH
1_555
99.8
B
HOH
2376
Y
O
HOH
1_555
B
MG
2208
U
MG
MG
1_555
B
HOH
2378
Y
O
HOH
1_555
65.6
B
HOH
2377
Y
O
HOH
1_555
B
MG
2208
U
MG
MG
1_555
B
HOH
2378
Y
O
HOH
1_555
83.5
B
G
2120
B
OP1
G
16
1_555
B
MG
2208
U
MG
MG
1_555
B
HOH
2424
Y
O
HOH
1_555
94.6
B
HOH
2304
Y
O
HOH
1_555
B
MG
2208
U
MG
MG
1_555
B
HOH
2424
Y
O
HOH
1_555
84.2
B
HOH
2376
Y
O
HOH
1_555
B
MG
2208
U
MG
MG
1_555
B
HOH
2424
Y
O
HOH
1_555
82.6
B
HOH
2377
Y
O
HOH
1_555
B
MG
2208
U
MG
MG
1_555
B
HOH
2424
Y
O
HOH
1_555
84.1
B
HOH
2378
Y
O
HOH
1_555
B
MG
2208
U
MG
MG
1_555
B
HOH
2424
Y
O
HOH
1_555
147.4
B
U
2122
B
O4
U
18
1_555
B
MG
2206
S
MG
MG
1_555
B
G
2123
B
O6
G
19
1_555
88.0
B
U
2122
B
O4
U
18
1_555
B
MG
2206
S
MG
MG
1_555
B
HOH
2302
Y
O
HOH
1_555
96.2
B
G
2123
B
O6
G
19
1_555
B
MG
2206
S
MG
MG
1_555
B
HOH
2302
Y
O
HOH
1_555
92.6
B
U
2122
B
O4
U
18
1_555
B
MG
2206
S
MG
MG
1_555
B
HOH
2321
Y
O
HOH
1_555
88.5
B
G
2123
B
O6
G
19
1_555
B
MG
2206
S
MG
MG
1_555
B
HOH
2321
Y
O
HOH
1_555
91.1
B
HOH
2302
Y
O
HOH
1_555
B
MG
2206
S
MG
MG
1_555
B
HOH
2321
Y
O
HOH
1_555
174.1
B
U
2122
B
O4
U
18
1_555
B
MG
2206
S
MG
MG
1_555
B
HOH
2325
Y
O
HOH
1_555
93.5
B
G
2123
B
O6
G
19
1_555
B
MG
2206
S
MG
MG
1_555
B
HOH
2325
Y
O
HOH
1_555
178.1
B
HOH
2302
Y
O
HOH
1_555
B
MG
2206
S
MG
MG
1_555
B
HOH
2325
Y
O
HOH
1_555
86.1
B
HOH
2321
Y
O
HOH
1_555
B
MG
2206
S
MG
MG
1_555
B
HOH
2325
Y
O
HOH
1_555
90.1
B
U
2122
B
O4
U
18
1_555
B
MG
2206
S
MG
MG
1_555
B
HOH
2326
Y
O
HOH
1_555
168.0
B
G
2123
B
O6
G
19
1_555
B
MG
2206
S
MG
MG
1_555
B
HOH
2326
Y
O
HOH
1_555
81.4
B
HOH
2302
Y
O
HOH
1_555
B
MG
2206
S
MG
MG
1_555
B
HOH
2326
Y
O
HOH
1_555
89.9
B
HOH
2321
Y
O
HOH
1_555
B
MG
2206
S
MG
MG
1_555
B
HOH
2326
Y
O
HOH
1_555
86.2
B
HOH
2325
Y
O
HOH
1_555
B
MG
2206
S
MG
MG
1_555
B
HOH
2326
Y
O
HOH
1_555
97.2
B
U
2172
B
O2
U
68
1_555
B
MG
2209
V
MG
MG
1_555
B
HOH
2341
Y
O
HOH
1_555
93.7
B
U
2172
B
O2
U
68
1_555
B
MG
2209
V
MG
MG
1_555
B
HOH
2379
Y
O
HOH
1_555
100.9
B
HOH
2341
Y
O
HOH
1_555
B
MG
2209
V
MG
MG
1_555
B
HOH
2379
Y
O
HOH
1_555
76.1
B
U
2172
B
O2
U
68
1_555
B
MG
2209
V
MG
MG
1_555
B
HOH
2380
Y
O
HOH
1_555
84.3
B
HOH
2341
Y
O
HOH
1_555
B
MG
2209
V
MG
MG
1_555
B
HOH
2380
Y
O
HOH
1_555
178.0
B
HOH
2379
Y
O
HOH
1_555
B
MG
2209
V
MG
MG
1_555
B
HOH
2380
Y
O
HOH
1_555
104.5
B
U
2172
B
O2
U
68
1_555
B
MG
2209
V
MG
MG
1_555
B
HOH
2381
Y
O
HOH
1_555
96.5
B
HOH
2341
Y
O
HOH
1_555
B
MG
2209
V
MG
MG
1_555
B
HOH
2381
Y
O
HOH
1_555
103.4
B
HOH
2379
Y
O
HOH
1_555
B
MG
2209
V
MG
MG
1_555
B
HOH
2381
Y
O
HOH
1_555
162.5
B
HOH
2380
Y
O
HOH
1_555
B
MG
2209
V
MG
MG
1_555
B
HOH
2381
Y
O
HOH
1_555
76.6
B
HOH
2304
Y
O
HOH
1_555
B
MG
2207
T
MG
MG
1_555
B
HOH
2315
Y
O
HOH
1_555
95.4
B
HOH
2304
Y
O
HOH
1_555
B
MG
2207
T
MG
MG
1_555
B
HOH
2321
Y
O
HOH
1_555
87.8
B
HOH
2315
Y
O
HOH
1_555
B
MG
2207
T
MG
MG
1_555
B
HOH
2321
Y
O
HOH
1_555
73.5
B
HOH
2304
Y
O
HOH
1_555
B
MG
2207
T
MG
MG
1_555
B
HOH
2325
Y
O
HOH
1_555
164.1
B
HOH
2315
Y
O
HOH
1_555
B
MG
2207
T
MG
MG
1_555
B
HOH
2325
Y
O
HOH
1_555
91.9
B
HOH
2321
Y
O
HOH
1_555
B
MG
2207
T
MG
MG
1_555
B
HOH
2325
Y
O
HOH
1_555
80.9
B
HOH
2304
Y
O
HOH
1_555
B
MG
2207
T
MG
MG
1_555
B
HOH
2363
Y
O
HOH
1_555
89.1
B
HOH
2315
Y
O
HOH
1_555
B
MG
2207
T
MG
MG
1_555
B
HOH
2363
Y
O
HOH
1_555
77.7
B
HOH
2321
Y
O
HOH
1_555
B
MG
2207
T
MG
MG
1_555
B
HOH
2363
Y
O
HOH
1_555
150.6
B
HOH
2325
Y
O
HOH
1_555
B
MG
2207
T
MG
MG
1_555
B
HOH
2363
Y
O
HOH
1_555
106.2
B
HOH
2304
Y
O
HOH
1_555
B
MG
2207
T
MG
MG
1_555
B
HOH
2399
Y
O
HOH
1_555
91.9
B
HOH
2315
Y
O
HOH
1_555
B
MG
2207
T
MG
MG
1_555
B
HOH
2399
Y
O
HOH
1_555
170.5
B
HOH
2321
Y
O
HOH
1_555
B
MG
2207
T
MG
MG
1_555
B
HOH
2399
Y
O
HOH
1_555
100.7
B
HOH
2325
Y
O
HOH
1_555
B
MG
2207
T
MG
MG
1_555
B
HOH
2399
Y
O
HOH
1_555
79.5
B
HOH
2363
Y
O
HOH
1_555
B
MG
2207
T
MG
MG
1_555
B
HOH
2399
Y
O
HOH
1_555
108.6
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
VAL
175
A
O
VAL
176
A
N
VAL
41
A
N
VAL
42
A
N
GLU
42
A
N
GLU
43
A
O
THR
215
A
O
THR
216
A
N
VAL
214
A
N
VAL
215
A
O
VAL
222
A
O
VAL
223
A
N
VAL
62
A
N
VAL
63
A
O
ILE
161
A
O
ILE
162
A
O
TYR
93
A
O
TYR
94
A
N
ALA
76
A
N
ALA
77
A
N
LEU
75
A
N
LEU
76
A
O
ALA
112
A
O
ALA
113
1
A
MET
0
A
MET
1
1
Y
1
A
LYS
36
-83.06
49.29
1
A
TRP
107
-85.07
35.84
1
A
MET
108
-106.85
57.51
-0.3981
-0.0000
0.0000
-1.0343
0.0000
1.4324
0.2077
0.1793
0.1807
2.0
19.675
1668
33346
33346
5.00
94.62
0.23
RANDOM
1
2.08
MOLECULAR REPLACEMENT
18.44
0.83
1.10
pdb entries 1AD2, 1MZP
ML
FLAT BULK SOLVENT MODEL
27.589
0.454
2.0
19.675
203
3738
71
1722
1742
0.007
3781
1.007
5507
15.761
1661
0.067
671
0.006
415
0.2485
0.2045
2.0671
154
2922
3076
88.00
0.2345
0.1894
2.1498
161
3062
3223
93.00
0.2465
0.1847
2.2475
162
3069
3231
94.00
0.2012
0.1836
2.3658
164
3131
3295
94.00
0.2405
0.1916
2.5138
167
3160
3327
95.00
0.2235
0.2067
2.7074
166
3155
3321
95.00
0.2471
0.2140
2.9790
169
3217
3386
96.00
0.2182
0.1806
3.4081
170
3232
3402
97.00
0.1565
0.1446
4.2866
173
3288
3461
97.00
0.1853
0.1647
19.6758
182
3442
3624
97.00
31.0
2.0
20.67
3U4M
35285
33346
0
0
0.052
0.064
1
19.14
3.99
94.5
0.204
2.0
2.1
6.68
4415
0.169
1
3.75
89.7
data scaling
XDS
phasing
PHASER
refinement
PHENIX
(phenix.refine: 1.6.4_486)
data reduction
XDS
Crystal structure of ribosomal protein tthl1 in complex with 80nt 23s rna from thermus thermophilus
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
5
N
N
6
N
N
6
N
N
7
N
N
7
N
N
7
N
N
7
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
5
N
N
5
N
N
5
N
N
5
N
N
7
N
N
8
N
N
8
N
N
A
GLY
4
A
GLY
5
HELX_P
A
GLU
12
A
GLU
13
1
1
9
A
THR
21
A
THR
22
HELX_P
A
LYS
30
A
LYS
31
1
2
10
A
ARG
53
A
ARG
54
HELX_P
A
ASN
57
A
ASN
58
5
3
5
A
GLU
81
A
GLU
82
HELX_P
A
ALA
89
A
ALA
90
1
4
9
A
ILE
99
A
ILE
100
HELX_P
A
GLY
106
A
GLY
107
1
5
8
A
VAL
119
A
VAL
120
HELX_P
A
GLY
132
A
GLY
133
1
6
14
A
PRO
133
A
PRO
134
HELX_P
A
GLY
135
A
GLY
136
5
7
3
A
ASN
139
A
ASN
140
HELX_P
A
GLY
143
A
GLY
144
5
8
5
A
ASN
148
A
ASN
149
HELX_P
A
ALA
158
A
ALA
159
1
9
11
A
PRO
181
A
PRO
182
HELX_P
A
HIS
199
A
HIS
200
1
10
19
metalc
2.854
A
ARG
6
A
O
ARG
7
1_555
A
NA
308
J
NA
NA
1_555
metalc
2.967
A
LEU
32
A
O
LEU
33
1_555
A
NA
309
K
NA
NA
1_555
metalc
2.541
A
ALA
33
A
O
ALA
34
1_555
A
MG
305
G
MG
MG
1_555
metalc
2.974
A
THR
34
A
OG1
THR
35
1_555
A
NA
308
J
NA
NA
1_555
metalc
2.401
A
ALA
35
A
O
ALA
36
1_555
A
MG
305
G
MG
MG
1_555
metalc
2.410
A
PHE
37
A
O
PHE
38
1_555
A
MG
305
G
MG
MG
1_555
metalc
2.552
A
GLU
39
A
OE1
GLU
40
1_555
A
MG
305
G
MG
MG
1_555
metalc
2.841
A
GLU
39
A
OE2
GLU
40
1_555
A
NA
309
K
NA
NA
1_555
metalc
2.916
A
GLU
42
A
OE2
GLU
43
1_555
A
NA
311
M
NA
NA
1_555
metalc
3.066
A
GLU
42
A
OE1
GLU
43
1_555
A
NA
311
M
NA
NA
1_555
metalc
2.795
A
GLU
42
A
OE1
GLU
43
1_555
B
NA
2210
W
NA
NA
1_555
metalc
2.778
A
THR
216
A
O
THR
217
1_555
A
NA
311
M
NA
NA
1_555
metalc
2.369
A
MLI
302
D
O7
MLI
1_555
A
MG
305
G
MG
MG
1_555
metalc
2.497
A
MLI
302
D
O8
MLI
1_555
A
MG
305
G
MG
MG
1_555
metalc
2.880
A
NA
308
J
NA
NA
1_555
A
HOH
408
X
O
HOH
1_555
metalc
3.022
A
NA
308
J
NA
NA
1_555
A
HOH
409
X
O
HOH
1_555
metalc
3.004
A
NA
310
L
NA
NA
1_555
A
HOH
466
X
O
HOH
1_555
metalc
2.856
A
NA
310
L
NA
NA
1_555
B
C
2129
B
OP1
C
25
1_555
metalc
2.601
A
NA
310
L
NA
NA
1_555
B
U
2130
B
OP2
U
26
1_555
metalc
2.793
A
NA
311
M
NA
NA
1_555
B
C
2175
B
O2
C
71
1_555
metalc
2.921
A
NA
311
M
NA
NA
1_555
B
C
2175
B
O2'
C
71
1_555
metalc
2.982
A
NA
311
M
NA
NA
1_555
B
A
2176
B
O4'
A
72
1_555
metalc
2.372
B
G
2120
B
OP1
G
16
1_555
B
MG
2208
U
MG
MG
1_555
metalc
2.394
B
U
2122
B
O4
U
18
1_555
B
MG
2206
S
MG
MG
1_555
metalc
2.572
B
G
2123
B
O6
G
19
1_555
B
MG
2206
S
MG
MG
1_555
metalc
2.689
B
G
2123
B
O2'
G
19
1_555
B
NA
2210
W
NA
NA
1_555
metalc
2.690
B
U
2172
B
O2
U
68
1_555
B
MG
2209
V
MG
MG
1_555
metalc
2.446
B
MG
2206
S
MG
MG
1_555
B
HOH
2302
Y
O
HOH
1_555
metalc
2.416
B
MG
2206
S
MG
MG
1_555
B
HOH
2321
Y
O
HOH
1_555
metalc
2.541
B
MG
2206
S
MG
MG
1_555
B
HOH
2325
Y
O
HOH
1_555
metalc
2.496
B
MG
2206
S
MG
MG
1_555
B
HOH
2326
Y
O
HOH
1_555
metalc
2.453
B
MG
2207
T
MG
MG
1_555
B
HOH
2304
Y
O
HOH
1_555
metalc
2.390
B
MG
2207
T
MG
MG
1_555
B
HOH
2315
Y
O
HOH
1_555
metalc
2.786
B
MG
2207
T
MG
MG
1_555
B
HOH
2321
Y
O
HOH
1_555
metalc
2.620
B
MG
2207
T
MG
MG
1_555
B
HOH
2325
Y
O
HOH
1_555
metalc
2.648
B
MG
2207
T
MG
MG
1_555
B
HOH
2363
Y
O
HOH
1_555
metalc
2.501
B
MG
2207
T
MG
MG
1_555
B
HOH
2399
Y
O
HOH
1_555
metalc
2.473
B
MG
2208
U
MG
MG
1_555
B
HOH
2304
Y
O
HOH
1_555
metalc
2.589
B
MG
2208
U
MG
MG
1_555
B
HOH
2376
Y
O
HOH
1_555
metalc
2.597
B
MG
2208
U
MG
MG
1_555
B
HOH
2377
Y
O
HOH
1_555
metalc
2.848
B
MG
2208
U
MG
MG
1_555
B
HOH
2378
Y
O
HOH
1_555
metalc
2.530
B
MG
2208
U
MG
MG
1_555
B
HOH
2424
Y
O
HOH
1_555
metalc
2.403
B
MG
2209
V
MG
MG
1_555
B
HOH
2341
Y
O
HOH
1_555
metalc
2.468
B
MG
2209
V
MG
MG
1_555
B
HOH
2379
Y
O
HOH
1_555
metalc
2.636
B
MG
2209
V
MG
MG
1_555
B
HOH
2380
Y
O
HOH
1_555
metalc
2.544
B
MG
2209
V
MG
MG
1_555
B
HOH
2381
Y
O
HOH
1_555
hydrog
WATSON-CRICK
B
G
2105
B
N1
G
1
1_555
B
C
2184
B
N3
C
80
1_555
hydrog
WATSON-CRICK
B
G
2105
B
N2
G
1
1_555
B
C
2184
B
O2
C
80
1_555
hydrog
WATSON-CRICK
B
G
2105
B
O6
G
1
1_555
B
C
2184
B
N4
C
80
1_555
hydrog
WATSON-CRICK
B
G
2106
B
N1
G
2
1_555
B
C
2183
B
N3
C
79
1_555
hydrog
WATSON-CRICK
B
G
2106
B
N2
G
2
1_555
B
C
2183
B
O2
C
79
1_555
hydrog
WATSON-CRICK
B
G
2106
B
O6
G
2
1_555
B
C
2183
B
N4
C
79
1_555
hydrog
WATSON-CRICK
B
G
2107
B
N1
G
3
1_555
B
C
2182
B
N3
C
78
1_555
hydrog
WATSON-CRICK
B
G
2107
B
N2
G
3
1_555
B
C
2182
B
O2
C
78
1_555
hydrog
WATSON-CRICK
B
G
2107
B
O6
G
3
1_555
B
C
2182
B
N4
C
78
1_555
hydrog
WATSON-CRICK
B
A
2108
B
N1
A
4
1_555
B
U
2181
B
N3
U
77
1_555
hydrog
WATSON-CRICK
B
A
2108
B
N6
A
4
1_555
B
U
2181
B
O4
U
77
1_555
hydrog
TYPE_16_PAIR
B
U
2109
B
N3
U
5
1_555
B
U
2180
B
O4
U
76
1_555
hydrog
TYPE_16_PAIR
B
U
2109
B
O2
U
5
1_555
B
U
2180
B
N3
U
76
1_555
hydrog
WATSON-CRICK
B
G
2110
B
N1
G
6
1_555
B
C
2179
B
N3
C
75
1_555
hydrog
WATSON-CRICK
B
G
2110
B
N2
G
6
1_555
B
C
2179
B
O2
C
75
1_555
hydrog
WATSON-CRICK
B
G
2110
B
O6
G
6
1_555
B
C
2179
B
N4
C
75
1_555
hydrog
C-G PAIR
B
C
2111
B
N4
C
7
1_555
B
G
2147
B
O6
G
43
1_555
hydrog
G-A MISPAIR
B
G
2112
B
O6
G
8
1_555
B
A
2169
B
N6
A
65
1_555
hydrog
U-A PAIR
B
U
2113
B
O4
U
9
1_555
B
A
2170
B
N6
A
66
1_555
hydrog
TYPE_5_PAIR
B
A
2114
B
N1
A
10
1_555
B
A
2119
B
N6
A
15
1_555
hydrog
TYPE_5_PAIR
B
A
2114
B
N6
A
10
1_555
B
A
2119
B
N7
A
15
1_555
hydrog
TYPE_10_PAIR
B
G
2115
B
N2
G
11
1_555
B
A
2171
B
N1
A
67
1_555
hydrog
TYPE_10_PAIR
B
G
2115
B
N3
G
11
1_555
B
A
2171
B
N6
A
67
1_555
hydrog
G-G MISPAIR
B
G
2116
B
N7
G
12
1_555
B
G
2166
B
N2
G
62
1_555
hydrog
WATSON-CRICK
B
A
2117
B
N1
A
13
1_555
B
U
2172
B
N3
U
68
1_555
hydrog
WATSON-CRICK
B
A
2117
B
N6
A
13
1_555
B
U
2172
B
O4
U
68
1_555
hydrog
U-G MISPAIR
B
U
2118
B
O4
U
14
1_555
B
G
2148
B
N2
G
44
1_555
hydrog
TYPE_10_PAIR
B
A
2119
B
N1
A
15
1_555
B
G
2168
B
N2
G
64
1_555
hydrog
TYPE_10_PAIR
B
A
2119
B
N6
A
15
1_555
B
G
2168
B
N3
G
64
1_555
hydrog
WATSON-CRICK
B
G
2120
B
N1
G
16
1_555
B
C
2178
B
N3
C
74
1_555
hydrog
WATSON-CRICK
B
G
2120
B
N2
G
16
1_555
B
C
2178
B
O2
C
74
1_555
hydrog
WATSON-CRICK
B
G
2120
B
O6
G
16
1_555
B
C
2178
B
N4
C
74
1_555
hydrog
WATSON-CRICK
B
G
2121
B
N1
G
17
1_555
B
C
2177
B
N3
C
73
1_555
hydrog
WATSON-CRICK
B
G
2121
B
N2
G
17
1_555
B
C
2177
B
O2
C
73
1_555
hydrog
WATSON-CRICK
B
G
2121
B
O6
G
17
1_555
B
C
2177
B
N4
C
73
1_555
hydrog
WATSON-CRICK
B
U
2122
B
N3
U
18
1_555
B
A
2176
B
N1
A
72
1_555
hydrog
WATSON-CRICK
B
U
2122
B
O4
U
18
1_555
B
A
2176
B
N6
A
72
1_555
hydrog
WATSON-CRICK
B
G
2123
B
N1
G
19
1_555
B
C
2175
B
N3
C
71
1_555
hydrog
WATSON-CRICK
B
G
2123
B
N2
G
19
1_555
B
C
2175
B
O2
C
71
1_555
hydrog
WATSON-CRICK
B
G
2123
B
O6
G
19
1_555
B
C
2175
B
N4
C
71
1_555
hydrog
WATSON-CRICK
B
G
2124
B
N1
G
20
1_555
B
C
2174
B
N3
C
70
1_555
hydrog
WATSON-CRICK
B
G
2124
B
N2
G
20
1_555
B
C
2174
B
O2
C
70
1_555
hydrog
WATSON-CRICK
B
G
2124
B
O6
G
20
1_555
B
C
2174
B
N4
C
70
1_555
hydrog
TYPE_11_PAIR
B
G
2125
B
N2
G
21
1_555
B
A
2173
B
N7
A
69
1_555
hydrog
TYPE_11_PAIR
B
G
2125
B
N3
G
21
1_555
B
A
2173
B
N6
A
69
1_555
hydrog
A-G MISPAIR
B
A
2126
B
N3
A
22
1_555
B
G
2162
B
N2
G
58
1_555
hydrog
WATSON-CRICK
B
G
2127
B
N1
G
23
1_555
B
C
2161
B
N3
C
57
1_555
hydrog
WATSON-CRICK
B
G
2127
B
N2
G
23
1_555
B
C
2161
B
O2
C
57
1_555
hydrog
WATSON-CRICK
B
G
2127
B
O6
G
23
1_555
B
C
2161
B
N4
C
57
1_555
hydrog
G-A MISPAIR
B
G
2127
B
N2
G
23
1_555
B
A
2173
B
N3
A
69
1_555
hydrog
WATSON-CRICK
B
C
2128
B
N3
C
24
1_555
B
G
2160
B
N1
G
56
1_555
hydrog
WATSON-CRICK
B
C
2128
B
N4
C
24
1_555
B
G
2160
B
O6
G
56
1_555
hydrog
WATSON-CRICK
B
C
2128
B
O2
C
24
1_555
B
G
2160
B
N2
G
56
1_555
hydrog
WATSON-CRICK
B
C
2129
B
N3
C
25
1_555
B
G
2159
B
N1
G
55
1_555
hydrog
WATSON-CRICK
B
C
2129
B
N4
C
25
1_555
B
G
2159
B
O6
G
55
1_555
hydrog
WATSON-CRICK
B
C
2129
B
O2
C
25
1_555
B
G
2159
B
N2
G
55
1_555
hydrog
TYPE_11_PAIR
B
G
2133
B
N2
G
29
1_555
B
A
2158
B
N7
A
54
1_555
hydrog
TYPE_11_PAIR
B
G
2133
B
N3
G
29
1_555
B
A
2158
B
N6
A
54
1_555
hydrog
TYPE_11_PAIR
B
A
2134
B
N6
A
30
1_555
B
G
2157
B
N3
G
53
1_555
hydrog
TYPE_11_PAIR
B
A
2134
B
N7
A
30
1_555
B
G
2157
B
N2
G
53
1_555
hydrog
TYPE_11_PAIR
B
A
2135
B
N6
A
31
1_555
B
G
2156
B
N3
G
52
1_555
hydrog
TYPE_11_PAIR
B
A
2135
B
N7
A
31
1_555
B
G
2156
B
N2
G
52
1_555
hydrog
WATSON-CRICK
B
C
2136
B
N3
C
32
1_555
B
G
2155
B
N1
G
51
1_555
hydrog
WATSON-CRICK
B
C
2136
B
N4
C
32
1_555
B
G
2155
B
O6
G
51
1_555
hydrog
WATSON-CRICK
B
C
2136
B
O2
C
32
1_555
B
G
2155
B
N2
G
51
1_555
hydrog
WATSON-CRICK
B
C
2137
B
N3
C
33
1_555
B
G
2154
B
N1
G
50
1_555
hydrog
WATSON-CRICK
B
C
2137
B
N4
C
33
1_555
B
G
2154
B
O6
G
50
1_555
hydrog
WATSON-CRICK
B
C
2137
B
O2
C
33
1_555
B
G
2154
B
N2
G
50
1_555
hydrog
WATSON-CRICK
B
C
2138
B
N3
C
34
1_555
B
G
2153
B
N1
G
49
1_555
hydrog
WATSON-CRICK
B
C
2138
B
N4
C
34
1_555
B
G
2153
B
O6
G
49
1_555
hydrog
WATSON-CRICK
B
C
2138
B
O2
C
34
1_555
B
G
2153
B
N2
G
49
1_555
hydrog
WATSON-CRICK
B
C
2139
B
N3
C
35
1_555
B
G
2152
B
N1
G
48
1_555
hydrog
WATSON-CRICK
B
C
2139
B
N4
C
35
1_555
B
G
2152
B
O6
G
48
1_555
hydrog
WATSON-CRICK
B
C
2139
B
O2
C
35
1_555
B
G
2152
B
N2
G
48
1_555
hydrog
WATSON-CRICK
B
C
2140
B
N3
C
36
1_555
B
G
2151
B
N1
G
47
1_555
hydrog
WATSON-CRICK
B
C
2140
B
N4
C
36
1_555
B
G
2151
B
O6
G
47
1_555
hydrog
WATSON-CRICK
B
C
2140
B
O2
C
36
1_555
B
G
2151
B
N2
G
47
1_555
hydrog
TYPE_28_PAIR
B
G
2141
B
N1
G
37
1_555
B
U
2150
B
O2
U
46
1_555
hydrog
TYPE_28_PAIR
B
G
2141
B
O6
G
37
1_555
B
U
2150
B
N3
U
46
1_555
hydrog
WATSON-CRICK
B
C
2142
B
N3
C
38
1_555
B
G
2149
B
N1
G
45
1_555
hydrog
WATSON-CRICK
B
C
2142
B
N4
C
38
1_555
B
G
2149
B
O6
G
45
1_555
hydrog
WATSON-CRICK
B
C
2142
B
O2
C
38
1_555
B
G
2149
B
N2
G
45
1_555
hydrog
WATSON-CRICK
B
C
2143
B
N3
C
39
1_555
B
G
2148
B
N1
G
44
1_555
hydrog
WATSON-CRICK
B
C
2143
B
N4
C
39
1_555
B
G
2148
B
O6
G
44
1_555
hydrog
WATSON-CRICK
B
C
2143
B
O2
C
39
1_555
B
G
2148
B
N2
G
44
1_555
hydrog
U-G MISPAIR
B
U
2144
B
O2
U
40
1_555
B
G
2147
B
N1
G
43
1_555
hydrog
G-U MISPAIR
B
G
2166
B
N1
G
62
1_555
B
U
2172
B
O4
U
68
1_555
hydrog
REVERSED HOOGSTEEN
B
U
2167
B
N3
U
63
1_555
B
A
2171
B
N7
A
67
1_555
hydrog
REVERSED HOOGSTEEN
B
U
2167
B
O2
U
63
1_555
B
A
2171
B
N6
A
67
1_555
RNA/RNA BINDING PROTEIN
Rossmann Fold, RIBOSOMAL PROTEIN, rRNA, rRNA BINDING, RIBOSOME, RNA-RNA BINDING PROTEIN complex
RL1_THETH
UNP
1
1
P27150
MPKHGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAK
GEKIKEAEEAGADYVGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAG
RIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTMGPSVRINPHS
3U4M
PDB
2
3U4M
1
229
3U4M
0
228
P27150
A
1
1
229
2105
2184
3U4M
2105
2184
3U4M
B
2
1
80
4
2
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
A
ALA
170
A
ALA
171
A
LYS
177
A
LYS
178
A
THR
40
A
THR
41
A
LEU
47
A
LEU
48
A
LEU
209
A
LEU
210
A
THR
216
A
THR
217
A
SER
221
A
SER
222
A
ARG
223
A
ARG
224
A
ARG
59
A
ARG
60
A
SER
63
A
SER
64
A
ARG
160
A
ARG
161
A
ARG
164
A
ARG
165
A
TYR
93
A
TYR
94
A
GLY
96
A
GLY
97
A
VAL
74
A
VAL
75
A
ALA
78
A
ALA
79
A
ALA
112
A
ALA
113
A
ALA
115
A
ALA
116
BINDING SITE FOR RESIDUE SO4 A 301
A
SO4
301
Software
4
BINDING SITE FOR RESIDUE MLI A 302
A
MLI
302
Software
12
BINDING SITE FOR RESIDUE MLI A 303
A
MLI
303
Software
7
BINDING SITE FOR RESIDUE MLI A 304
A
MLI
304
Software
8
BINDING SITE FOR RESIDUE MG A 305
A
MG
305
Software
5
BINDING SITE FOR RESIDUE CL A 306
A
CL
306
Software
1
BINDING SITE FOR RESIDUE CL A 307
A
CL
307
Software
3
BINDING SITE FOR RESIDUE NA A 308
A
NA
308
Software
5
BINDING SITE FOR RESIDUE NA A 309
A
NA
309
Software
8
BINDING SITE FOR RESIDUE NA A 310
A
NA
310
Software
4
BINDING SITE FOR RESIDUE NA A 311
A
NA
311
Software
6
BINDING SITE FOR RESIDUE SO4 B 2201
B
SO4
2201
Software
9
BINDING SITE FOR RESIDUE MLI B 2202
B
MLI
2202
Software
4
BINDING SITE FOR RESIDUE MLI B 2203
B
MLI
2203
Software
6
BINDING SITE FOR RESIDUE MLI B 2204
B
MLI
2204
Software
7
BINDING SITE FOR RESIDUE MLI B 2205
B
MLI
2205
Software
9
BINDING SITE FOR RESIDUE MG B 2206
B
MG
2206
Software
6
BINDING SITE FOR RESIDUE MG B 2207
B
MG
2207
Software
6
BINDING SITE FOR RESIDUE MG B 2208
B
MG
2208
Software
6
BINDING SITE FOR RESIDUE MG B 2209
B
MG
2209
Software
5
BINDING SITE FOR RESIDUE NA B 2210
B
NA
2210
Software
4
A
GLU
197
A
GLU
198
4
1_555
A
THR
207
A
THR
208
4
1_555
A
PHE
208
A
PHE
209
4
1_555
A
LEU
209
A
LEU
210
4
1_555
A
ALA
33
A
ALA
34
12
1_555
A
ALA
35
A
ALA
36
12
1_555
A
PHE
37
A
PHE
38
12
1_555
A
ASP
38
A
ASP
39
12
1_555
A
GLU
39
A
GLU
40
12
1_555
A
ILE
83
A
ILE
84
12
3_554
A
LYS
84
A
LYS
85
12
3_554
A
GLU
87
A
GLU
88
12
3_554
A
ALA
178
A
ALA
179
12
1_555
A
SER
179
A
SER
180
12
1_555
A
MG
305
G
MG
12
1_555
A
HOH
417
X
HOH
12
3_554
A
ALA
112
A
ALA
113
7
1_555
A
ILE
156
A
ILE
157
7
1_555
A
ARG
160
A
ARG
161
7
1_555
A
ILE
161
A
ILE
162
7
1_555
A
GLU
162
A
GLU
163
7
1_555
A
HOH
453
X
HOH
7
1_555
A
HOH
457
X
HOH
7
1_555
A
PHE
37
A
PHE
38
8
1_555
A
ASP
38
A
ASP
39
8
1_555
A
ALA
78
A
ALA
79
8
3_554
A
GLY
80
A
GLY
81
8
3_554
A
GLY
96
A
GLY
97
8
3_554
A
GLU
97
A
GLU
98
8
3_554
A
GLU
98
A
GLU
99
8
3_554
A
HOH
474
X
HOH
8
1_555
A
ALA
33
A
ALA
34
5
1_555
A
ALA
35
A
ALA
36
5
1_555
A
PHE
37
A
PHE
38
5
1_555
A
GLU
39
A
GLU
40
5
1_555
A
MLI
302
D
MLI
5
1_555
A
GLU
81
A
GLU
82
1
1_555
A
GLY
60
A
GLY
61
3
1_555
A
THR
61
A
THR
62
3
1_555
A
HIS
199
A
HIS
200
3
1_555
A
ARG
6
A
ARG
7
5
1_555
A
LEU
10
A
LEU
11
5
1_555
A
THR
34
A
THR
35
5
1_555
A
HOH
408
X
HOH
5
1_555
A
HOH
409
X
HOH
5
1_555
A
ARG
6
A
ARG
7
8
1_555
A
LEU
10
A
LEU
11
8
1_555
A
LEU
32
A
LEU
33
8
1_555
A
ALA
33
A
ALA
34
8
1_555
A
THR
34
A
THR
35
8
1_555
A
GLU
39
A
GLU
40
8
1_555
A
MET
218
A
MET
219
8
1_555
A
GLY
219
A
GLY
220
8
1_555
A
ARG
6
A
ARG
7
4
1_555
A
HOH
466
X
HOH
4
1_555
B
C
2129
B
C
25
4
1_555
B
U
2130
B
U
26
4
1_555
A
GLU
42
A
GLU
43
6
1_555
A
THR
216
A
THR
217
6
1_555
A
THR
217
A
THR
218
6
1_555
B
G
2123
B
G
19
6
1_555
B
C
2175
B
C
71
6
1_555
B
A
2176
B
A
72
6
1_555
B
C
2175
B
C
71
9
1_555
B
A
2176
B
A
72
9
1_555
B
HOH
2304
Y
HOH
9
1_555
B
HOH
2321
Y
HOH
9
1_555
B
HOH
2372
Y
HOH
9
1_555
B
HOH
2375
Y
HOH
9
1_555
B
HOH
2376
Y
HOH
9
1_555
B
HOH
2383
Y
HOH
9
1_555
B
HOH
2388
Y
HOH
9
1_555
B
A
2134
B
A
30
4
1_555
B
A
2135
B
A
31
4
1_555
B
G
2156
B
G
52
4
1_555
B
G
2157
B
G
53
4
1_555
B
C
2178
B
C
74
6
1_555
B
C
2179
B
C
75
6
1_555
B
HOH
2361
Y
HOH
6
1_555
B
HOH
2362
Y
HOH
6
1_555
B
HOH
2370
Y
HOH
6
1_555
B
HOH
2391
Y
HOH
6
1_555
B
U
2130
B
U
26
7
1_555
B
G
2131
B
G
27
7
1_555
B
C
2139
B
C
35
7
4_555
B
C
2140
B
C
36
7
4_555
B
G
2152
B
G
48
7
4_555
B
G
2159
B
G
55
7
1_555
B
HOH
2371
Y
HOH
7
1_555
B
A
2119
B
A
15
9
1_555
B
G
2121
B
G
17
9
1_555
B
A
2170
B
A
66
9
1_555
B
HOH
2325
Y
HOH
9
1_555
B
HOH
2334
Y
HOH
9
1_555
B
HOH
2400
Y
HOH
9
1_555
B
HOH
2410
Y
HOH
9
1_555
B
HOH
2414
Y
HOH
9
1_555
B
HOH
2416
Y
HOH
9
1_555
B
U
2122
B
U
18
6
1_555
B
G
2123
B
G
19
6
1_555
B
HOH
2302
Y
HOH
6
1_555
B
HOH
2321
Y
HOH
6
1_555
B
HOH
2325
Y
HOH
6
1_555
B
HOH
2326
Y
HOH
6
1_555
B
HOH
2304
Y
HOH
6
1_555
B
HOH
2315
Y
HOH
6
1_555
B
HOH
2321
Y
HOH
6
1_555
B
HOH
2325
Y
HOH
6
1_555
B
HOH
2363
Y
HOH
6
1_555
B
HOH
2399
Y
HOH
6
1_555
B
G
2120
B
G
16
6
1_555
B
HOH
2304
Y
HOH
6
1_555
B
HOH
2376
Y
HOH
6
1_555
B
HOH
2377
Y
HOH
6
1_555
B
HOH
2378
Y
HOH
6
1_555
B
HOH
2424
Y
HOH
6
1_555
B
U
2172
B
U
68
5
1_555
B
HOH
2341
Y
HOH
5
1_555
B
HOH
2379
Y
HOH
5
1_555
B
HOH
2380
Y
HOH
5
1_555
B
HOH
2381
Y
HOH
5
1_555
A
GLU
42
A
GLU
43
4
1_555
A
HIS
44
A
HIS
45
4
1_555
B
G
2123
B
G
19
4
1_555
B
G
2124
B
G
20
4
1_555
19
P 21 21 21