0.013965
0.000000
0.000000
0.000000
0.012200
0.000000
0.000000
0.000000
0.007872
0.000000
0.000000
0.000000
Bellon, S.F.
Whittington, D.A.
Long, A.L.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.000
90.000
90.000
71.610
81.970
127.038
C29 H25 F N4 O5
528.531
N-{4-[(6,7-dimethoxyquinolin-4-yl)oxy]-3-fluorophenyl}-1,5-dimethyl-3-oxo-2-phenyl-2,3-dihydro-1H-pyrazole-4-carboxamide
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Y
1
N
N
N
2
N
N
Y
3
N
C
Y
4
N
C
Y
5
N
C
Y
6
N
C
Y
7
N
C
Y
8
N
C
Y
9
N
C
Y
10
N
C
Y
11
N
C
N
12
N
C
N
13
N
C
N
14
N
C
Y
15
N
C
Y
16
N
C
Y
17
N
C
N
18
N
C
N
19
N
O
Y
20
N
C
Y
21
N
C
Y
22
N
C
N
23
N
O
N
24
N
C
Y
25
N
C
N
26
N
O
Y
27
N
C
N
28
N
F
Y
29
N
C
N
30
N
N
N
31
N
C
N
32
N
O
N
33
N
C
N
34
N
O
N
35
N
C
N
36
N
N
Y
37
N
C
Y
38
N
C
Y
39
N
C
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
N
N
66
S
C
N
67
N
C
N
68
N
O
N
69
N
C
N
70
N
O
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
N
N
79
S
C
N
80
N
C
N
81
N
O
N
82
N
C
N
83
N
C
N
84
N
C
N
85
N
N
N
86
N
C
N
87
N
N
N
88
N
N
N
89
N
O
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
N
N
106
S
C
N
107
N
C
N
108
N
O
N
109
N
C
N
110
N
C
N
111
N
O
N
112
N
N
N
113
N
O
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
N
N
123
S
C
N
124
N
C
N
125
N
O
N
126
N
C
N
127
N
C
N
128
N
O
N
129
N
O
N
130
N
O
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
N
N
139
R
C
N
140
N
C
N
141
N
O
N
142
N
C
N
143
N
S
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
N
N
153
S
C
N
154
N
C
N
155
N
O
N
156
N
C
N
157
N
C
N
158
N
C
N
159
N
O
N
160
N
N
N
161
N
O
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
N
N
173
S
C
N
174
N
C
N
175
N
O
N
176
N
C
N
177
N
C
N
178
N
C
N
179
N
O
N
180
N
O
N
181
N
O
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
N
N
192
N
C
N
193
N
C
N
194
N
O
N
195
N
O
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
N
N
202
S
C
N
203
N
C
N
204
N
O
N
205
N
C
Y
206
N
C
Y
207
N
N
Y
208
N
C
Y
209
N
C
Y
210
N
N
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
O
N
223
N
H
N
224
N
H
N
225
N
N
N
226
S
C
N
227
N
C
N
228
N
O
N
229
S
C
N
230
N
C
N
231
N
C
N
232
N
C
N
233
N
O
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
N
252
N
C
N
253
N
C
N
254
N
C
N
255
N
O
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
N
N
270
S
C
N
271
N
C
N
272
N
O
N
273
N
C
N
274
N
C
N
275
N
C
N
276
N
C
N
277
N
N
N
278
N
O
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
N
N
295
S
C
N
296
N
C
N
297
N
O
N
298
N
C
N
299
N
C
N
300
N
S
N
301
N
C
N
302
N
O
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
N
N
315
S
C
N
316
N
C
N
317
N
O
N
318
N
C
Y
319
N
C
Y
320
N
C
Y
321
N
C
Y
322
N
C
Y
323
N
C
Y
324
N
C
N
325
N
O
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
N
N
338
S
C
N
339
N
C
N
340
N
O
N
341
N
C
N
342
N
C
N
343
N
C
N
344
N
O
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
N
N
355
S
C
N
356
N
C
N
357
N
O
N
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
N
N
369
S
C
N
370
N
C
N
371
N
O
N
372
R
C
N
373
N
O
N
374
N
C
N
375
N
O
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
N
N
386
S
C
N
387
N
C
N
388
N
O
N
389
N
C
Y
390
N
C
Y
391
N
C
Y
392
N
C
Y
393
N
N
Y
394
N
C
Y
395
N
C
Y
396
N
C
Y
397
N
C
Y
398
N
C
N
399
N
O
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
N
N
413
S
C
N
414
N
C
N
415
N
O
N
416
N
C
Y
417
N
C
Y
418
N
C
Y
419
N
C
Y
420
N
C
Y
421
N
C
Y
422
N
C
N
423
N
O
N
424
N
O
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
N
N
437
S
C
N
438
N
C
N
439
N
O
N
440
N
C
N
441
N
C
N
442
N
C
N
443
N
O
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
Y
1
N
doub
Y
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
Y
6
N
doub
Y
7
N
sing
N
8
N
sing
Y
9
N
sing
Y
10
N
sing
Y
11
N
doub
Y
12
N
sing
N
13
N
sing
Y
14
N
doub
N
15
N
sing
Y
16
N
doub
Y
17
N
sing
N
18
N
sing
Y
19
N
sing
N
20
N
sing
N
21
N
sing
Y
22
N
doub
Y
23
N
sing
Y
24
N
doub
N
25
N
sing
N
26
N
sing
N
27
N
doub
N
28
N
sing
N
29
N
sing
N
30
N
doub
N
31
N
sing
N
32
N
sing
N
33
N
sing
Y
34
N
doub
N
35
N
sing
Y
36
N
sing
Y
37
N
sing
Y
38
N
doub
N
39
N
sing
Y
40
N
sing
Y
41
N
doub
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
Y
48
N
doub
Y
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
doub
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
doub
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
doub
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
doub
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
doub
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
doub
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
doub
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
doub
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
doub
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
doub
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
doub
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
doub
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
Y
208
N
sing
Y
209
N
doub
Y
210
N
doub
N
211
N
sing
Y
212
N
sing
N
213
N
sing
Y
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
doub
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
doub
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
doub
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
doub
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
Y
316
N
doub
Y
317
N
sing
Y
318
N
sing
N
319
N
sing
Y
320
N
doub
N
321
N
sing
Y
322
N
doub
N
323
N
sing
Y
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
doub
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
doub
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
doub
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
Y
385
N
doub
Y
386
N
sing
Y
387
N
sing
N
388
N
sing
Y
389
N
doub
Y
390
N
sing
Y
391
N
sing
N
392
N
sing
Y
393
N
sing
Y
394
N
doub
N
395
N
sing
Y
396
N
doub
N
397
N
sing
Y
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
doub
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
Y
413
N
doub
Y
414
N
sing
Y
415
N
sing
N
416
N
sing
Y
417
N
doub
N
418
N
sing
Y
419
N
doub
N
420
N
sing
Y
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
doub
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
US
J.Med.Chem.
JMCMAR
0151
0022-2623
55
1858
1867
10.1021/jm201330u
22320343
Structure-based design of novel class II c-Met inhibitors: 1. Identification of pyrazolone-based derivatives.
2012
10.2210/pdb3u6h/pdb
pdb_00003u6h
100
1
IMAGE PLATE
2005-02-07
RIGAKU RAXIS IV++
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU FR-E SUPERBRIGHT
35215.715
Hepatocyte growth factor receptor
2.7.10.1
unp residues 1048-1351
1
man
polymer
528.531
N-{4-[(6,7-dimethoxyquinolin-4-yl)oxy]-3-fluorophenyl}-1,5-dimethyl-3-oxo-2-phenyl-2,3-dihydro-1H-pyrazole-4-carboxamide
1
syn
non-polymer
18.015
water
257
nat
water
HGF receptor, HGF/SF receptor, Proto-oncogene c-Met, Scatter factor receptor, SF receptor, Tyrosine-protein kinase Met
no
no
QNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE
GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAA
RNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV
NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHHHHHH
QNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE
GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAA
RNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV
NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHHHHHH
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
MET
9606
Homo sapiens
7111
Trichoplusia ni
baculovirus
pFastBac1
1
2.65
53.53
VAPOR DIFFUSION
5.0
12% PEG 6000, 1.0 M lithium chloride, 0.1 M sodium citrate, pH 5.0, VAPOR DIFFUSION, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
struct_site
repository
Initial release
Database references
Data collection
Database references
Derived calculations
Refinement description
1
0
2012-02-22
1
1
2012-05-23
1
2
2023-09-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2011-10-12
REL
REL
03X
N-{4-[(6,7-dimethoxyquinolin-4-yl)oxy]-3-fluorophenyl}-1,5-dimethyl-3-oxo-2-phenyl-2,3-dihydro-1H-pyrazole-4-carboxamide
HOH
water
2RFN
pdb entry 2RFN
PDB
experimental model
03X
1
2
03X
03X
1
A
HOH
2
3
HOH
HOH
2
A
HOH
3
3
HOH
HOH
3
A
HOH
4
3
HOH
HOH
4
A
HOH
5
3
HOH
HOH
5
A
HOH
6
3
HOH
HOH
6
A
HOH
7
3
HOH
HOH
7
A
HOH
8
3
HOH
HOH
8
A
HOH
9
3
HOH
HOH
9
A
HOH
10
3
HOH
HOH
10
A
HOH
11
3
HOH
HOH
11
A
HOH
12
3
HOH
HOH
12
A
HOH
13
3
HOH
HOH
13
A
HOH
14
3
HOH
HOH
14
A
HOH
15
3
HOH
HOH
15
A
HOH
16
3
HOH
HOH
16
A
HOH
17
3
HOH
HOH
17
A
HOH
18
3
HOH
HOH
18
A
HOH
19
3
HOH
HOH
19
A
HOH
20
3
HOH
HOH
20
A
HOH
21
3
HOH
HOH
21
A
HOH
22
3
HOH
HOH
22
A
HOH
23
3
HOH
HOH
23
A
HOH
24
3
HOH
HOH
24
A
HOH
25
3
HOH
HOH
25
A
HOH
26
3
HOH
HOH
26
A
HOH
27
3
HOH
HOH
27
A
HOH
28
3
HOH
HOH
28
A
HOH
29
3
HOH
HOH
29
A
HOH
30
3
HOH
HOH
30
A
HOH
31
3
HOH
HOH
31
A
HOH
32
3
HOH
HOH
32
A
HOH
33
3
HOH
HOH
33
A
HOH
34
3
HOH
HOH
34
A
HOH
35
3
HOH
HOH
35
A
HOH
36
3
HOH
HOH
36
A
HOH
37
3
HOH
HOH
37
A
HOH
38
3
HOH
HOH
38
A
HOH
39
3
HOH
HOH
39
A
HOH
40
3
HOH
HOH
40
A
HOH
41
3
HOH
HOH
41
A
HOH
42
3
HOH
HOH
42
A
HOH
43
3
HOH
HOH
43
A
HOH
44
3
HOH
HOH
44
A
HOH
45
3
HOH
HOH
45
A
HOH
46
3
HOH
HOH
46
A
HOH
47
3
HOH
HOH
47
A
HOH
48
3
HOH
HOH
48
A
HOH
49
3
HOH
HOH
49
A
HOH
50
3
HOH
HOH
50
A
HOH
51
3
HOH
HOH
51
A
HOH
52
3
HOH
HOH
52
A
HOH
53
3
HOH
HOH
53
A
HOH
54
3
HOH
HOH
54
A
HOH
55
3
HOH
HOH
55
A
HOH
56
3
HOH
HOH
56
A
HOH
57
3
HOH
HOH
57
A
HOH
58
3
HOH
HOH
58
A
HOH
59
3
HOH
HOH
59
A
HOH
60
3
HOH
HOH
60
A
HOH
61
3
HOH
HOH
61
A
HOH
62
3
HOH
HOH
62
A
HOH
63
3
HOH
HOH
63
A
HOH
64
3
HOH
HOH
64
A
HOH
65
3
HOH
HOH
65
A
HOH
66
3
HOH
HOH
66
A
HOH
67
3
HOH
HOH
67
A
HOH
68
3
HOH
HOH
68
A
HOH
69
3
HOH
HOH
69
A
HOH
70
3
HOH
HOH
70
A
HOH
71
3
HOH
HOH
71
A
HOH
72
3
HOH
HOH
72
A
HOH
73
3
HOH
HOH
73
A
HOH
74
3
HOH
HOH
74
A
HOH
75
3
HOH
HOH
75
A
HOH
76
3
HOH
HOH
76
A
HOH
77
3
HOH
HOH
77
A
HOH
78
3
HOH
HOH
78
A
HOH
79
3
HOH
HOH
79
A
HOH
80
3
HOH
HOH
80
A
HOH
81
3
HOH
HOH
81
A
HOH
82
3
HOH
HOH
82
A
HOH
83
3
HOH
HOH
83
A
HOH
84
3
HOH
HOH
84
A
HOH
85
3
HOH
HOH
85
A
HOH
86
3
HOH
HOH
86
A
HOH
87
3
HOH
HOH
87
A
HOH
88
3
HOH
HOH
88
A
HOH
89
3
HOH
HOH
89
A
HOH
90
3
HOH
HOH
90
A
HOH
91
3
HOH
HOH
91
A
HOH
92
3
HOH
HOH
92
A
HOH
93
3
HOH
HOH
93
A
HOH
94
3
HOH
HOH
94
A
HOH
95
3
HOH
HOH
95
A
HOH
96
3
HOH
HOH
96
A
HOH
97
3
HOH
HOH
97
A
HOH
98
3
HOH
HOH
98
A
HOH
99
3
HOH
HOH
99
A
HOH
100
3
HOH
HOH
100
A
HOH
101
3
HOH
HOH
101
A
HOH
102
3
HOH
HOH
102
A
HOH
103
3
HOH
HOH
103
A
HOH
104
3
HOH
HOH
104
A
HOH
105
3
HOH
HOH
105
A
HOH
106
3
HOH
HOH
106
A
HOH
107
3
HOH
HOH
107
A
HOH
108
3
HOH
HOH
108
A
HOH
109
3
HOH
HOH
109
A
HOH
110
3
HOH
HOH
110
A
HOH
111
3
HOH
HOH
111
A
HOH
112
3
HOH
HOH
112
A
HOH
113
3
HOH
HOH
113
A
HOH
114
3
HOH
HOH
114
A
HOH
115
3
HOH
HOH
115
A
HOH
116
3
HOH
HOH
116
A
HOH
117
3
HOH
HOH
117
A
HOH
118
3
HOH
HOH
118
A
HOH
119
3
HOH
HOH
119
A
HOH
120
3
HOH
HOH
120
A
HOH
121
3
HOH
HOH
121
A
HOH
122
3
HOH
HOH
122
A
HOH
123
3
HOH
HOH
123
A
HOH
124
3
HOH
HOH
124
A
HOH
125
3
HOH
HOH
125
A
HOH
126
3
HOH
HOH
126
A
HOH
127
3
HOH
HOH
127
A
HOH
128
3
HOH
HOH
128
A
HOH
129
3
HOH
HOH
129
A
HOH
130
3
HOH
HOH
130
A
HOH
131
3
HOH
HOH
131
A
HOH
132
3
HOH
HOH
132
A
HOH
133
3
HOH
HOH
133
A
HOH
134
3
HOH
HOH
134
A
HOH
135
3
HOH
HOH
135
A
HOH
136
3
HOH
HOH
136
A
HOH
137
3
HOH
HOH
137
A
HOH
138
3
HOH
HOH
138
A
HOH
139
3
HOH
HOH
139
A
HOH
140
3
HOH
HOH
140
A
HOH
141
3
HOH
HOH
141
A
HOH
142
3
HOH
HOH
142
A
HOH
143
3
HOH
HOH
143
A
HOH
144
3
HOH
HOH
144
A
HOH
145
3
HOH
HOH
145
A
HOH
146
3
HOH
HOH
146
A
HOH
147
3
HOH
HOH
147
A
HOH
148
3
HOH
HOH
148
A
HOH
149
3
HOH
HOH
149
A
HOH
150
3
HOH
HOH
150
A
HOH
151
3
HOH
HOH
151
A
HOH
152
3
HOH
HOH
152
A
HOH
153
3
HOH
HOH
153
A
HOH
154
3
HOH
HOH
154
A
HOH
155
3
HOH
HOH
155
A
HOH
156
3
HOH
HOH
156
A
HOH
157
3
HOH
HOH
157
A
HOH
158
3
HOH
HOH
158
A
HOH
159
3
HOH
HOH
159
A
HOH
160
3
HOH
HOH
160
A
HOH
161
3
HOH
HOH
161
A
HOH
162
3
HOH
HOH
162
A
HOH
163
3
HOH
HOH
163
A
HOH
164
3
HOH
HOH
164
A
HOH
165
3
HOH
HOH
165
A
HOH
166
3
HOH
HOH
166
A
HOH
167
3
HOH
HOH
167
A
HOH
168
3
HOH
HOH
168
A
HOH
169
3
HOH
HOH
169
A
HOH
170
3
HOH
HOH
170
A
HOH
171
3
HOH
HOH
171
A
HOH
172
3
HOH
HOH
172
A
HOH
173
3
HOH
HOH
173
A
HOH
174
3
HOH
HOH
174
A
HOH
175
3
HOH
HOH
175
A
HOH
176
3
HOH
HOH
176
A
HOH
177
3
HOH
HOH
177
A
HOH
178
3
HOH
HOH
178
A
HOH
179
3
HOH
HOH
179
A
HOH
180
3
HOH
HOH
180
A
HOH
181
3
HOH
HOH
181
A
HOH
182
3
HOH
HOH
182
A
HOH
183
3
HOH
HOH
183
A
HOH
184
3
HOH
HOH
184
A
HOH
185
3
HOH
HOH
185
A
HOH
186
3
HOH
HOH
186
A
HOH
187
3
HOH
HOH
187
A
HOH
188
3
HOH
HOH
188
A
HOH
189
3
HOH
HOH
189
A
HOH
190
3
HOH
HOH
190
A
HOH
191
3
HOH
HOH
191
A
HOH
192
3
HOH
HOH
192
A
HOH
193
3
HOH
HOH
193
A
HOH
194
3
HOH
HOH
194
A
HOH
195
3
HOH
HOH
195
A
HOH
196
3
HOH
HOH
196
A
HOH
197
3
HOH
HOH
197
A
HOH
198
3
HOH
HOH
198
A
HOH
199
3
HOH
HOH
199
A
HOH
200
3
HOH
HOH
200
A
HOH
201
3
HOH
HOH
201
A
HOH
202
3
HOH
HOH
202
A
HOH
203
3
HOH
HOH
203
A
HOH
204
3
HOH
HOH
204
A
HOH
205
3
HOH
HOH
205
A
HOH
206
3
HOH
HOH
206
A
HOH
207
3
HOH
HOH
207
A
HOH
208
3
HOH
HOH
208
A
HOH
209
3
HOH
HOH
209
A
HOH
210
3
HOH
HOH
210
A
HOH
211
3
HOH
HOH
211
A
HOH
212
3
HOH
HOH
212
A
HOH
213
3
HOH
HOH
213
A
HOH
214
3
HOH
HOH
214
A
HOH
215
3
HOH
HOH
215
A
HOH
216
3
HOH
HOH
216
A
HOH
217
3
HOH
HOH
217
A
HOH
218
3
HOH
HOH
218
A
HOH
219
3
HOH
HOH
219
A
HOH
220
3
HOH
HOH
220
A
HOH
221
3
HOH
HOH
221
A
HOH
222
3
HOH
HOH
222
A
HOH
223
3
HOH
HOH
223
A
HOH
224
3
HOH
HOH
224
A
HOH
225
3
HOH
HOH
225
A
HOH
226
3
HOH
HOH
226
A
HOH
227
3
HOH
HOH
227
A
HOH
228
3
HOH
HOH
228
A
HOH
229
3
HOH
HOH
229
A
HOH
230
3
HOH
HOH
230
A
HOH
231
3
HOH
HOH
231
A
HOH
232
3
HOH
HOH
232
A
HOH
233
3
HOH
HOH
233
A
HOH
234
3
HOH
HOH
234
A
HOH
235
3
HOH
HOH
235
A
HOH
236
3
HOH
HOH
236
A
HOH
237
3
HOH
HOH
237
A
HOH
238
3
HOH
HOH
238
A
HOH
239
3
HOH
HOH
239
A
HOH
240
3
HOH
HOH
240
A
HOH
241
3
HOH
HOH
241
A
HOH
242
3
HOH
HOH
242
A
HOH
243
3
HOH
HOH
243
A
HOH
244
3
HOH
HOH
244
A
HOH
245
3
HOH
HOH
245
A
HOH
246
3
HOH
HOH
246
A
HOH
247
3
HOH
HOH
247
A
HOH
248
3
HOH
HOH
248
A
HOH
249
3
HOH
HOH
249
A
HOH
250
3
HOH
HOH
250
A
HOH
251
3
HOH
HOH
251
A
HOH
252
3
HOH
HOH
252
A
HOH
253
3
HOH
HOH
253
A
HOH
254
3
HOH
HOH
254
A
HOH
255
3
HOH
HOH
255
A
HOH
256
3
HOH
HOH
256
A
HOH
257
3
HOH
HOH
257
A
HOH
1
3
HOH
HOH
1357
A
n
1
1048
A
n
2
1049
A
n
3
1050
A
VAL
1051
n
4
VAL
1051
A
HIS
1052
n
5
HIS
1052
A
ILE
1053
n
6
ILE
1053
A
ASP
1054
n
7
ASP
1054
A
LEU
1055
n
8
LEU
1055
A
SER
1056
n
9
SER
1056
A
ALA
1057
n
10
ALA
1057
A
LEU
1058
n
11
LEU
1058
A
ASN
1059
n
12
ASN
1059
A
PRO
1060
n
13
PRO
1060
A
GLU
1061
n
14
GLU
1061
A
LEU
1062
n
15
LEU
1062
A
VAL
1063
n
16
VAL
1063
A
GLN
1064
n
17
GLN
1064
A
ALA
1065
n
18
ALA
1065
A
VAL
1066
n
19
VAL
1066
A
GLN
1067
n
20
GLN
1067
A
HIS
1068
n
21
HIS
1068
A
VAL
1069
n
22
VAL
1069
A
VAL
1070
n
23
VAL
1070
A
ILE
1071
n
24
ILE
1071
A
GLY
1072
n
25
GLY
1072
A
PRO
1073
n
26
PRO
1073
A
SER
1074
n
27
SER
1074
A
SER
1075
n
28
SER
1075
A
LEU
1076
n
29
LEU
1076
A
ILE
1077
n
30
ILE
1077
A
VAL
1078
n
31
VAL
1078
A
HIS
1079
n
32
HIS
1079
A
PHE
1080
n
33
PHE
1080
A
ASN
1081
n
34
ASN
1081
A
GLU
1082
n
35
GLU
1082
A
VAL
1083
n
36
VAL
1083
A
ILE
1084
n
37
ILE
1084
A
GLY
1085
n
38
GLY
1085
A
ARG
1086
n
39
ARG
1086
A
GLY
1087
n
40
GLY
1087
A
HIS
1088
n
41
HIS
1088
A
PHE
1089
n
42
PHE
1089
A
GLY
1090
n
43
GLY
1090
A
CYS
1091
n
44
CYS
1091
A
VAL
1092
n
45
VAL
1092
A
TYR
1093
n
46
TYR
1093
A
HIS
1094
n
47
HIS
1094
A
GLY
1095
n
48
GLY
1095
A
THR
1096
n
49
THR
1096
A
LEU
1097
n
50
LEU
1097
A
LEU
1098
n
51
LEU
1098
A
ASP
1099
n
52
ASP
1099
A
ASN
1100
n
53
ASN
1100
A
ASP
1101
n
54
ASP
1101
A
GLY
1102
n
55
GLY
1102
A
LYS
1103
n
56
LYS
1103
A
LYS
1104
n
57
LYS
1104
A
ILE
1105
n
58
ILE
1105
A
HIS
1106
n
59
HIS
1106
A
CYS
1107
n
60
CYS
1107
A
ALA
1108
n
61
ALA
1108
A
VAL
1109
n
62
VAL
1109
A
LYS
1110
n
63
LYS
1110
A
SER
1111
n
64
SER
1111
A
LEU
1112
n
65
LEU
1112
A
ASN
1113
n
66
ASN
1113
A
ARG
1114
n
67
ARG
1114
A
ILE
1115
n
68
ILE
1115
A
THR
1116
n
69
THR
1116
A
ASP
1117
n
70
ASP
1117
A
ILE
1118
n
71
ILE
1118
A
GLY
1119
n
72
GLY
1119
A
GLU
1120
n
73
GLU
1120
A
VAL
1121
n
74
VAL
1121
A
SER
1122
n
75
SER
1122
A
GLN
1123
n
76
GLN
1123
A
PHE
1124
n
77
PHE
1124
A
LEU
1125
n
78
LEU
1125
A
THR
1126
n
79
THR
1126
A
GLU
1127
n
80
GLU
1127
A
GLY
1128
n
81
GLY
1128
A
ILE
1129
n
82
ILE
1129
A
ILE
1130
n
83
ILE
1130
A
MET
1131
n
84
MET
1131
A
LYS
1132
n
85
LYS
1132
A
ASP
1133
n
86
ASP
1133
A
PHE
1134
n
87
PHE
1134
A
SER
1135
n
88
SER
1135
A
HIS
1136
n
89
HIS
1136
A
PRO
1137
n
90
PRO
1137
A
ASN
1138
n
91
ASN
1138
A
VAL
1139
n
92
VAL
1139
A
LEU
1140
n
93
LEU
1140
A
SER
1141
n
94
SER
1141
A
LEU
1142
n
95
LEU
1142
A
LEU
1143
n
96
LEU
1143
A
GLY
1144
n
97
GLY
1144
A
ILE
1145
n
98
ILE
1145
A
CYS
1146
n
99
CYS
1146
A
LEU
1147
n
100
LEU
1147
A
ARG
1148
n
101
ARG
1148
A
SER
1149
n
102
SER
1149
A
GLU
1150
n
103
GLU
1150
A
GLY
1151
n
104
GLY
1151
A
SER
1152
n
105
SER
1152
A
PRO
1153
n
106
PRO
1153
A
LEU
1154
n
107
LEU
1154
A
VAL
1155
n
108
VAL
1155
A
VAL
1156
n
109
VAL
1156
A
LEU
1157
n
110
LEU
1157
A
PRO
1158
n
111
PRO
1158
A
TYR
1159
n
112
TYR
1159
A
MET
1160
n
113
MET
1160
A
LYS
1161
n
114
LYS
1161
A
HIS
1162
n
115
HIS
1162
A
GLY
1163
n
116
GLY
1163
A
ASP
1164
n
117
ASP
1164
A
LEU
1165
n
118
LEU
1165
A
ARG
1166
n
119
ARG
1166
A
ASN
1167
n
120
ASN
1167
A
PHE
1168
n
121
PHE
1168
A
ILE
1169
n
122
ILE
1169
A
ARG
1170
n
123
ARG
1170
A
ASN
1171
n
124
ASN
1171
A
GLU
1172
n
125
GLU
1172
A
THR
1173
n
126
THR
1173
A
HIS
1174
n
127
HIS
1174
A
ASN
1175
n
128
ASN
1175
A
PRO
1176
n
129
PRO
1176
A
THR
1177
n
130
THR
1177
A
VAL
1178
n
131
VAL
1178
A
LYS
1179
n
132
LYS
1179
A
ASP
1180
n
133
ASP
1180
A
LEU
1181
n
134
LEU
1181
A
ILE
1182
n
135
ILE
1182
A
GLY
1183
n
136
GLY
1183
A
PHE
1184
n
137
PHE
1184
A
GLY
1185
n
138
GLY
1185
A
LEU
1186
n
139
LEU
1186
A
GLN
1187
n
140
GLN
1187
A
VAL
1188
n
141
VAL
1188
A
ALA
1189
n
142
ALA
1189
A
LYS
1190
n
143
LYS
1190
A
GLY
1191
n
144
GLY
1191
A
MET
1192
n
145
MET
1192
A
LYS
1193
n
146
LYS
1193
A
TYR
1194
n
147
TYR
1194
A
LEU
1195
n
148
LEU
1195
A
ALA
1196
n
149
ALA
1196
A
SER
1197
n
150
SER
1197
A
LYS
1198
n
151
LYS
1198
A
LYS
1199
n
152
LYS
1199
A
PHE
1200
n
153
PHE
1200
A
VAL
1201
n
154
VAL
1201
A
HIS
1202
n
155
HIS
1202
A
ARG
1203
n
156
ARG
1203
A
ASP
1204
n
157
ASP
1204
A
LEU
1205
n
158
LEU
1205
A
ALA
1206
n
159
ALA
1206
A
ALA
1207
n
160
ALA
1207
A
ARG
1208
n
161
ARG
1208
A
ASN
1209
n
162
ASN
1209
A
CYS
1210
n
163
CYS
1210
A
MET
1211
n
164
MET
1211
A
LEU
1212
n
165
LEU
1212
A
ASP
1213
n
166
ASP
1213
A
GLU
1214
n
167
GLU
1214
A
LYS
1215
n
168
LYS
1215
A
PHE
1216
n
169
PHE
1216
A
THR
1217
n
170
THR
1217
A
VAL
1218
n
171
VAL
1218
A
LYS
1219
n
172
LYS
1219
A
VAL
1220
n
173
VAL
1220
A
ALA
1221
n
174
ALA
1221
A
ASP
1222
n
175
ASP
1222
A
PHE
1223
n
176
PHE
1223
A
GLY
1224
n
177
GLY
1224
A
n
178
1225
A
n
179
1226
A
n
180
1227
A
n
181
1228
A
n
182
1229
A
n
183
1230
A
n
184
1231
A
n
185
1232
A
n
186
1233
A
n
187
1234
A
n
188
1235
A
n
189
1236
A
n
190
1237
A
n
191
1238
A
n
192
1239
A
n
193
1240
A
n
194
1241
A
n
195
1242
A
n
196
1243
A
n
197
1244
A
n
198
1245
A
PRO
1246
n
199
PRO
1246
A
VAL
1247
n
200
VAL
1247
A
LYS
1248
n
201
LYS
1248
A
TRP
1249
n
202
TRP
1249
A
MET
1250
n
203
MET
1250
A
ALA
1251
n
204
ALA
1251
A
LEU
1252
n
205
LEU
1252
A
GLU
1253
n
206
GLU
1253
A
SER
1254
n
207
SER
1254
A
LEU
1255
n
208
LEU
1255
A
GLN
1256
n
209
GLN
1256
A
THR
1257
n
210
THR
1257
A
GLN
1258
n
211
GLN
1258
A
LYS
1259
n
212
LYS
1259
A
PHE
1260
n
213
PHE
1260
A
THR
1261
n
214
THR
1261
A
THR
1262
n
215
THR
1262
A
LYS
1263
n
216
LYS
1263
A
SER
1264
n
217
SER
1264
A
ASP
1265
n
218
ASP
1265
A
VAL
1266
n
219
VAL
1266
A
TRP
1267
n
220
TRP
1267
A
SER
1268
n
221
SER
1268
A
PHE
1269
n
222
PHE
1269
A
GLY
1270
n
223
GLY
1270
A
VAL
1271
n
224
VAL
1271
A
LEU
1272
n
225
LEU
1272
A
LEU
1273
n
226
LEU
1273
A
TRP
1274
n
227
TRP
1274
A
GLU
1275
n
228
GLU
1275
A
LEU
1276
n
229
LEU
1276
A
MET
1277
n
230
MET
1277
A
THR
1278
n
231
THR
1278
A
ARG
1279
n
232
ARG
1279
A
GLY
1280
n
233
GLY
1280
A
ALA
1281
n
234
ALA
1281
A
PRO
1282
n
235
PRO
1282
A
PRO
1283
n
236
PRO
1283
A
TYR
1284
n
237
TYR
1284
A
PRO
1285
n
238
PRO
1285
A
ASP
1286
n
239
ASP
1286
A
VAL
1287
n
240
VAL
1287
A
ASN
1288
n
241
ASN
1288
A
THR
1289
n
242
THR
1289
A
PHE
1290
n
243
PHE
1290
A
ASP
1291
n
244
ASP
1291
A
ILE
1292
n
245
ILE
1292
A
THR
1293
n
246
THR
1293
A
VAL
1294
n
247
VAL
1294
A
TYR
1295
n
248
TYR
1295
A
LEU
1296
n
249
LEU
1296
A
LEU
1297
n
250
LEU
1297
A
GLN
1298
n
251
GLN
1298
A
GLY
1299
n
252
GLY
1299
A
ARG
1300
n
253
ARG
1300
A
ARG
1301
n
254
ARG
1301
A
LEU
1302
n
255
LEU
1302
A
LEU
1303
n
256
LEU
1303
A
GLN
1304
n
257
GLN
1304
A
PRO
1305
n
258
PRO
1305
A
GLU
1306
n
259
GLU
1306
A
TYR
1307
n
260
TYR
1307
A
CYS
1308
n
261
CYS
1308
A
PRO
1309
n
262
PRO
1309
A
ASP
1310
n
263
ASP
1310
A
PRO
1311
n
264
PRO
1311
A
LEU
1312
n
265
LEU
1312
A
TYR
1313
n
266
TYR
1313
A
GLU
1314
n
267
GLU
1314
A
VAL
1315
n
268
VAL
1315
A
MET
1316
n
269
MET
1316
A
LEU
1317
n
270
LEU
1317
A
LYS
1318
n
271
LYS
1318
A
CYS
1319
n
272
CYS
1319
A
TRP
1320
n
273
TRP
1320
A
HIS
1321
n
274
HIS
1321
A
PRO
1322
n
275
PRO
1322
A
LYS
1323
n
276
LYS
1323
A
ALA
1324
n
277
ALA
1324
A
GLU
1325
n
278
GLU
1325
A
MET
1326
n
279
MET
1326
A
ARG
1327
n
280
ARG
1327
A
PRO
1328
n
281
PRO
1328
A
SER
1329
n
282
SER
1329
A
PHE
1330
n
283
PHE
1330
A
SER
1331
n
284
SER
1331
A
GLU
1332
n
285
GLU
1332
A
LEU
1333
n
286
LEU
1333
A
VAL
1334
n
287
VAL
1334
A
SER
1335
n
288
SER
1335
A
ARG
1336
n
289
ARG
1336
A
ILE
1337
n
290
ILE
1337
A
SER
1338
n
291
SER
1338
A
ALA
1339
n
292
ALA
1339
A
ILE
1340
n
293
ILE
1340
A
PHE
1341
n
294
PHE
1341
A
SER
1342
n
295
SER
1342
A
THR
1343
n
296
THR
1343
A
PHE
1344
n
297
PHE
1344
A
ILE
1345
n
298
ILE
1345
A
GLY
1346
n
299
GLY
1346
A
GLU
1347
n
300
GLU
1347
A
HIS
1348
n
301
HIS
1348
A
TYR
1349
n
302
TYR
1349
A
VAL
1350
n
303
VAL
1350
A
HIS
1351
n
304
HIS
1351
A
n
305
1352
A
n
306
1353
A
n
307
1354
A
n
308
1355
A
n
309
1356
A
author_defined_assembly
1
monomeric
software_defined_assembly
PISA
2
dimeric
1760
-10
25860
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_555
x,-y,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
1077
A
N
ILE
30
A
O
THR
1096
A
O
THR
49
A
N
TYR
1093
A
N
TYR
46
A
O
VAL
1109
A
O
VAL
62
A
N
ALA
1108
A
N
ALA
61
A
O
LEU
1157
A
O
LEU
110
A
O
VAL
1156
A
O
VAL
109
A
N
GLY
1144
A
N
GLY
97
A
N
MET
1211
A
N
MET
164
A
O
LYS
1219
A
O
LYS
172
1
A
HOH
241
C
HOH
1
A
GLN
1048
A
GLN
1
1
Y
1
A
ASN
1049
A
ASN
2
1
Y
1
A
THR
1050
A
THR
3
1
Y
1
A
LEU
1225
A
LEU
178
1
Y
1
A
ALA
1226
A
ALA
179
1
Y
1
A
ARG
1227
A
ARG
180
1
Y
1
A
ASP
1228
A
ASP
181
1
Y
1
A
MET
1229
A
MET
182
1
Y
1
A
TYR
1230
A
TYR
183
1
Y
1
A
ASP
1231
A
ASP
184
1
Y
1
A
LYS
1232
A
LYS
185
1
Y
1
A
GLU
1233
A
GLU
186
1
Y
1
A
TYR
1234
A
TYR
187
1
Y
1
A
TYR
1235
A
TYR
188
1
Y
1
A
SER
1236
A
SER
189
1
Y
1
A
VAL
1237
A
VAL
190
1
Y
1
A
HIS
1238
A
HIS
191
1
Y
1
A
ASN
1239
A
ASN
192
1
Y
1
A
LYS
1240
A
LYS
193
1
Y
1
A
THR
1241
A
THR
194
1
Y
1
A
GLY
1242
A
GLY
195
1
Y
1
A
ALA
1243
A
ALA
196
1
Y
1
A
LYS
1244
A
LYS
197
1
Y
1
A
LEU
1245
A
LEU
198
1
Y
1
A
HIS
1352
A
HIS
305
1
Y
1
A
HIS
1353
A
HIS
306
1
Y
1
A
HIS
1354
A
HIS
307
1
Y
1
A
HIS
1355
A
HIS
308
1
Y
1
A
HIS
1356
A
HIS
309
1
Y
1
A
ARG
1203
82.85
-16.84
1
A
ASP
1204
-145.35
40.92
1
A
GLN
1258
53.22
11.47
64.280
31.4478
12.750
1.7600
0.0000
0.0000
-2.9500
0.0000
1.1800
0.9400
0.9050
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.2737
0.2149
0.2207
2.0000
19.7100
2314
23067
21192
9.8000
91.87
0.2783
0.2194
1.000
0.500
0.8187
4.7680
0.1340
0.2188
0.2014
RANDOM
1
THROUGHOUT
0
MOLECULAR REPLACEMENT
0.2010
0.8000
0.8000
1.4000
pdb entry 2RFN
MAXIMUM LIKELIHOOD
MASK
2.0000
19.7100
257
2524
39
0
2228
0.008
0.022
2335
1.202
1.976
3169
4.717
5.000
280
34.195
23.535
99
14.308
15.000
397
12.595
15.000
12
0.079
0.200
349
0.003
0.020
1751
0.181
0.200
1095
0.300
0.200
1589
0.123
0.200
219
0.150
0.200
41
0.109
0.200
15
0.727
2.000
1440
1.277
3.000
2270
1.217
3.000
1039
1.959
6.000
898
0.4130
0.3050
2.0510
90
920
1010
20
55.0100
2.000
20.000
3U6H
116897
23515
-3
0.054
1.721
1
41.600
4.97
91.80
0.260
2.000
2.070
1434
1.943
1
57.500
0.209
2.070
2.150
1889
1.911
1
74.500
0.181
2.150
2.250
2335
1.881
1
91.800
0.143
2.250
2.370
2469
1.789
1
97.900
0.111
2.370
2.520
2505
1.746
1
98.700
0.084
2.520
2.710
2538
1.783
1
99.200
0.064
2.710
2.990
2534
1.748
1
99.400
0.051
2.990
3.420
2560
1.716
1
99.600
0.045
3.422
4.300
2570
1.556
1
99.200
0.046
4.302
20.000
2681
1.608
1
99.000
data reduction
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
DENZO
program
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
program
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
data extraction
PDB
deposit@deposit.rcsb.org
June 10, 2010
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.10
data collection
CrystalClear
phasing
AMoRE
N
Crystal structure of c-Met in complex with pyrazolone inhibitor 26
1
N
N
2
N
N
3
N
N
A
ASP
1054
A
ASP
7
HELX_P
A
LEU
1058
A
LEU
11
5
1
5
A
ASN
1059
A
ASN
12
HELX_P
A
GLN
1067
A
GLN
20
1
2
9
A
HIS
1068
A
HIS
21
HELX_P
A
VAL
1070
A
VAL
23
5
3
3
A
ASP
1117
A
ASP
70
HELX_P
A
PHE
1134
A
PHE
87
1
4
18
A
ASP
1164
A
ASP
117
HELX_P
A
ASN
1171
A
ASN
124
1
5
8
A
THR
1177
A
THR
130
HELX_P
A
LYS
1198
A
LYS
151
1
6
22
A
ALA
1206
A
ALA
159
HELX_P
A
ARG
1208
A
ARG
161
5
7
3
A
PRO
1246
A
PRO
199
HELX_P
A
MET
1250
A
MET
203
5
8
5
A
ALA
1251
A
ALA
204
HELX_P
A
GLN
1258
A
GLN
211
1
9
8
A
THR
1261
A
THR
214
HELX_P
A
THR
1278
A
THR
231
1
10
18
A
ASP
1291
A
ASP
244
HELX_P
A
GLN
1298
A
GLN
251
1
11
8
A
PRO
1309
A
PRO
262
HELX_P
A
TRP
1320
A
TRP
273
1
12
12
A
LYS
1323
A
LYS
276
HELX_P
A
ARG
1327
A
ARG
280
5
13
5
A
SER
1329
A
SER
282
HELX_P
A
PHE
1344
A
PHE
297
1
14
16
transferase/transferase inhibitor
kinase domain, phosphotransferase, cancer, hepatocyte growth factor, HGF, transferase-transferase inhibitor complex
MET_HUMAN
UNP
1
1048
P08581
QNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE
GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAA
RNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV
NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVH
1048
1351
3U6H
1048
1351
P08581
A
1
1
304
1
expression tag
HIS
1352
3U6H
A
P08581
UNP
305
1
expression tag
HIS
1353
3U6H
A
P08581
UNP
306
1
expression tag
HIS
1354
3U6H
A
P08581
UNP
307
1
expression tag
HIS
1355
3U6H
A
P08581
UNP
308
1
expression tag
HIS
1356
3U6H
A
P08581
UNP
309
5
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LEU
1076
A
LEU
29
A
VAL
1083
A
VAL
36
A
CYS
1091
A
CYS
44
A
LEU
1098
A
LEU
51
A
LYS
1104
A
LYS
57
A
SER
1111
A
SER
64
A
LEU
1154
A
LEU
107
A
PRO
1158
A
PRO
111
A
GLY
1144
A
GLY
97
A
CYS
1146
A
CYS
99
A
CYS
1210
A
CYS
163
A
LEU
1212
A
LEU
165
A
VAL
1218
A
VAL
171
A
VAL
1220
A
VAL
173
BINDING SITE FOR RESIDUE 03X A 1
A
03X
1
Software
19
A
HOH
33
C
HOH
19
1_555
A
HOH
48
C
HOH
19
1_555
A
ILE
1084
A
ILE
37
19
1_555
A
PHE
1089
A
PHE
42
19
1_555
A
VAL
1092
A
VAL
45
19
1_555
A
ALA
1108
A
ALA
61
19
1_555
A
PHE
1124
A
PHE
77
19
1_555
A
GLU
1127
A
GLU
80
19
1_555
A
MET
1131
A
MET
84
19
1_555
A
LEU
1140
A
LEU
93
19
1_555
A
VAL
1155
A
VAL
108
19
1_555
A
LEU
1157
A
LEU
110
19
1_555
A
PRO
1158
A
PRO
111
19
1_555
A
TYR
1159
A
TYR
112
19
1_555
A
MET
1160
A
MET
113
19
1_555
A
MET
1211
A
MET
164
19
1_555
A
ALA
1221
A
ALA
174
19
1_555
A
ASP
1222
A
ASP
175
19
1_555
A
PHE
1223
A
PHE
176
19
1_555
20
C 2 2 21