0.019459
0.000000
0.000000
0.000000
0.019459
0.000000
0.000000
0.000000
0.005388
0.000000
0.000000
0.000000
Martin-Garcia, J.M.
Ruiz-Sanz, J.
Luque, I.
Camara-Artigas, A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
32
90.000
90.000
90.000
51.390
51.390
185.590
C2 H4 O
44.053
ACETYL GROUP
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cl -1
35.453
CHLORIDE ION
non-polymer
C H2 O2
46.025
FORMIC ACID
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Na 1
22.990
SODIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
C
N
2
N
O
N
3
N
C
N
4
N
H
N
5
N
H
N
6
N
H
N
7
N
H
N
8
N
N
N
9
S
C
N
10
N
C
N
11
N
O
N
12
N
C
N
13
N
O
N
14
N
H
N
15
N
H
N
16
N
H
N
17
N
H
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
N
N
22
S
C
N
23
N
C
N
24
N
O
N
25
N
C
N
26
N
C
N
27
N
C
N
28
N
N
N
29
N
C
N
30
N
N
N
31
N
N
N
32
N
O
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
N
N
49
S
C
N
50
N
C
N
51
N
O
N
52
N
C
N
53
N
C
N
54
N
O
N
55
N
N
N
56
N
O
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
N
N
66
S
C
N
67
N
C
N
68
N
O
N
69
N
C
N
70
N
C
N
71
N
O
N
72
N
O
N
73
N
O
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
CL
N
82
N
C
N
83
N
O
N
84
N
O
N
85
N
H
N
86
N
H
N
87
N
N
N
88
S
C
N
89
N
C
N
90
N
O
N
91
N
C
N
92
N
C
N
93
N
C
N
94
N
O
N
95
N
N
N
96
N
O
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
N
N
108
S
C
N
109
N
C
N
110
N
O
N
111
N
C
N
112
N
C
N
113
N
C
N
114
N
O
N
115
N
O
N
116
N
O
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
N
N
127
N
C
N
128
N
C
N
129
N
O
N
130
N
O
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
C
N
137
N
O
N
138
N
C
N
139
N
O
N
140
N
C
N
141
N
O
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
N
N
151
S
C
N
152
N
C
N
153
N
O
N
154
N
C
Y
155
N
C
Y
156
N
N
Y
157
N
C
Y
158
N
C
Y
159
N
N
N
160
N
O
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
O
N
172
N
H
N
173
N
H
N
174
N
N
N
175
S
C
N
176
N
C
N
177
N
O
N
178
S
C
N
179
N
C
N
180
N
C
N
181
N
C
N
182
N
O
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
N
N
197
S
C
N
198
N
C
N
199
N
O
N
200
N
C
N
201
N
C
N
202
N
C
N
203
N
C
N
204
N
O
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
N
N
219
S
C
N
220
N
C
N
221
N
O
N
222
N
C
N
223
N
C
N
224
N
C
N
225
N
C
N
226
N
N
N
227
N
O
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
N
N
244
S
C
N
245
N
C
N
246
N
O
N
247
N
C
N
248
N
C
N
249
N
S
N
250
N
C
N
251
N
O
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
NA
N
264
N
N
N
265
S
C
N
266
N
C
N
267
N
O
N
268
N
C
Y
269
N
C
Y
270
N
C
Y
271
N
C
Y
272
N
C
Y
273
N
C
Y
274
N
C
N
275
N
O
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
C
N
293
N
C
N
294
N
O
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
N
C
N
309
N
O
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
R
C
N
323
N
O
N
324
N
C
N
325
N
O
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
N
N
336
S
C
N
337
N
C
N
338
N
O
N
339
N
C
Y
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
N
Y
344
N
C
Y
345
N
C
Y
346
N
C
Y
347
N
C
Y
348
N
C
N
349
N
O
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
N
N
363
S
C
N
364
N
C
N
365
N
O
N
366
N
C
Y
367
N
C
Y
368
N
C
Y
369
N
C
Y
370
N
C
Y
371
N
C
Y
372
N
C
N
373
N
O
N
374
N
O
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
N
N
387
S
C
N
388
N
C
N
389
N
O
N
390
N
C
N
391
N
C
N
392
N
C
N
393
N
O
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
ZN
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
doub
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
doub
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
doub
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
doub
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
doub
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
doub
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
doub
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
doub
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
Y
150
N
sing
Y
151
N
doub
Y
152
N
doub
N
153
N
sing
Y
154
N
sing
N
155
N
sing
Y
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
doub
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
doub
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
doub
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
doub
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
doub
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
Y
258
N
doub
Y
259
N
sing
Y
260
N
sing
N
261
N
sing
Y
262
N
doub
N
263
N
sing
Y
264
N
doub
N
265
N
sing
Y
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
doub
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
doub
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
doub
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
doub
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
Y
327
N
doub
Y
328
N
sing
Y
329
N
sing
N
330
N
sing
Y
331
N
doub
Y
332
N
sing
Y
333
N
sing
N
334
N
sing
Y
335
N
sing
Y
336
N
doub
N
337
N
sing
Y
338
N
doub
N
339
N
sing
Y
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
doub
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
Y
355
N
doub
Y
356
N
sing
Y
357
N
sing
N
358
N
sing
Y
359
N
doub
N
360
N
sing
Y
361
N
doub
N
362
N
sing
Y
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
doub
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
68
1030
1040
10.1107/S0907444912019798
22868769
The promiscuous binding of the Fyn SH3 domain to a peptide from the NS5A protein.
2012
10.2210/pdb3ua7/pdb
pdb_00003ua7
100
1
CCD
2010-05-24
ADSC QUANTUM 210
Diamond(001)
SINGLE WAVELENGTH
M
x-ray
1
0.97
1.0
3.80
239711
0.095
1.450
49.526
44446
98.30
5.40
ID14-1
ESRF
0.97
SYNCHROTRON
ESRF BEAMLINE ID14-1
7171.764
Tyrosine-protein kinase Fyn
2.7.10.2
SH3 domain (UNP residues 81-143)
4
man
polymer
1314.624
Non-structural protein 5A
Proline-rich region (UNP residues 350-360)
2
syn
polymer
92.094
GLYCEROL
1
syn
non-polymer
35.453
CHLORIDE ION
1
syn
non-polymer
22.990
SODIUM ION
1
syn
non-polymer
65.409
ZINC ION
2
syn
non-polymer
46.025
FORMIC ACID
2
syn
non-polymer
18.015
water
173
nat
water
Proto-oncogene Syn, Proto-oncogene c-Fyn, Src-like kinase, SLK, p59-Fyn
NS5A
no
no
MGTGVTLFVALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPVDS
MGTGVTLFVALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPVDS
A,B,C,D
polypeptide(L)
no
yes
(ACE)APPIPPPRRKR
XAPPIPPPRRKR
E,F
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
FYN
9606
Homo sapiens
469008
Escherichia coli
BL21(DE3)
plasmid
pET3d
1
1.96
37.13
VAPOR DIFFUSION, HANGING DROP
8.0
4 M sodium formate, 10 mM zinc chloride, 0.1 M Tris, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_ncs_dom_lim
struct_ref_seq_dif
struct_site
repository
Initial release
Database references
Data collection
Database references
Derived calculations
Refinement description
1
0
2012-07-25
1
1
2013-01-23
1
2
2023-09-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ncs_dom_lim.beg_auth_comp_id
_struct_ncs_dom_lim.beg_label_asym_id
_struct_ncs_dom_lim.beg_label_comp_id
_struct_ncs_dom_lim.beg_label_seq_id
_struct_ncs_dom_lim.end_auth_comp_id
_struct_ncs_dom_lim.end_label_asym_id
_struct_ncs_dom_lim.end_label_comp_id
_struct_ncs_dom_lim.end_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2011-10-21
REL
REL
0.081
0.081
85.20
4.50
0.076
0.076
96.80
4.40
0.090
0.090
97.50
4.70
0.087
0.087
97.40
5.20
0.081
0.081
97.70
5.50
0.101
0.101
98.00
5.60
0.137
0.137
99.00
5.60
0.189
0.189
99.60
5.60
0.295
0.295
99.90
5.60
0.454
0.454
100.00
5.60
GOL
GLYCEROL
CL
CHLORIDE ION
NA
SODIUM ION
ZN
ZINC ION
FMT
FORMIC ACID
HOH
water
11103
HCV
Hepatitis C virus
sample
1SHF
PDB ENTRY 1SHF
PDB
experimental model
GOL
1
3
GOL
GOL
1
A
CL
1
4
CL
CL
144
A
NA
1
5
NA
NA
145
A
ZN
1
6
ZN
ZN
1
C
FMT
1
7
FMT
FMT
144
C
ZN
2
6
ZN
ZN
2
D
FMT
1
7
FMT
FMT
1
D
HOH
2
8
HOH
HOH
2
A
HOH
3
8
HOH
HOH
3
A
HOH
4
8
HOH
HOH
4
A
HOH
7
8
HOH
HOH
7
A
HOH
11
8
HOH
HOH
11
A
HOH
16
8
HOH
HOH
16
A
HOH
18
8
HOH
HOH
18
A
HOH
19
8
HOH
HOH
19
A
HOH
21
8
HOH
HOH
21
A
HOH
22
8
HOH
HOH
22
A
HOH
27
8
HOH
HOH
27
A
HOH
41
8
HOH
HOH
41
A
HOH
43
8
HOH
HOH
43
A
HOH
44
8
HOH
HOH
44
A
HOH
45
8
HOH
HOH
45
A
HOH
54
8
HOH
HOH
54
A
HOH
62
8
HOH
HOH
62
A
HOH
69
8
HOH
HOH
69
A
HOH
71
8
HOH
HOH
71
A
HOH
73
8
HOH
HOH
73
A
HOH
78
8
HOH
HOH
78
A
HOH
82
8
HOH
HOH
146
A
HOH
87
8
HOH
HOH
147
A
HOH
90
8
HOH
HOH
148
A
HOH
96
8
HOH
HOH
149
A
HOH
97
8
HOH
HOH
150
A
HOH
151
8
HOH
HOH
151
A
HOH
100
8
HOH
HOH
152
A
HOH
153
8
HOH
HOH
153
A
HOH
101
8
HOH
HOH
154
A
HOH
113
8
HOH
HOH
155
A
HOH
114
8
HOH
HOH
156
A
HOH
117
8
HOH
HOH
157
A
HOH
158
8
HOH
HOH
158
A
HOH
134
8
HOH
HOH
159
A
HOH
160
8
HOH
HOH
160
A
HOH
161
8
HOH
HOH
161
A
HOH
137
8
HOH
HOH
162
A
HOH
140
8
HOH
HOH
163
A
HOH
141
8
HOH
HOH
164
A
HOH
142
8
HOH
HOH
165
A
HOH
166
8
HOH
HOH
166
A
HOH
167
8
HOH
HOH
167
A
HOH
143
8
HOH
HOH
168
A
HOH
169
8
HOH
HOH
169
A
HOH
170
8
HOH
HOH
170
A
HOH
145
8
HOH
HOH
171
A
HOH
172
8
HOH
HOH
172
A
HOH
5
8
HOH
HOH
5
B
HOH
8
8
HOH
HOH
8
B
HOH
12
8
HOH
HOH
12
B
HOH
15
8
HOH
HOH
15
B
HOH
23
8
HOH
HOH
23
B
HOH
25
8
HOH
HOH
25
B
HOH
26
8
HOH
HOH
26
B
HOH
28
8
HOH
HOH
28
B
HOH
30
8
HOH
HOH
30
B
HOH
32
8
HOH
HOH
32
B
HOH
33
8
HOH
HOH
33
B
HOH
35
8
HOH
HOH
35
B
HOH
36
8
HOH
HOH
36
B
HOH
37
8
HOH
HOH
37
B
HOH
42
8
HOH
HOH
42
B
HOH
47
8
HOH
HOH
47
B
HOH
48
8
HOH
HOH
48
B
HOH
49
8
HOH
HOH
49
B
HOH
53
8
HOH
HOH
53
B
HOH
63
8
HOH
HOH
63
B
HOH
64
8
HOH
HOH
64
B
HOH
67
8
HOH
HOH
67
B
HOH
68
8
HOH
HOH
68
B
HOH
72
8
HOH
HOH
72
B
HOH
74
8
HOH
HOH
74
B
HOH
76
8
HOH
HOH
76
B
HOH
79
8
HOH
HOH
79
B
HOH
144
8
HOH
HOH
144
B
HOH
80
8
HOH
HOH
145
B
HOH
83
8
HOH
HOH
146
B
HOH
85
8
HOH
HOH
147
B
HOH
148
8
HOH
HOH
148
B
HOH
86
8
HOH
HOH
149
B
HOH
89
8
HOH
HOH
150
B
HOH
95
8
HOH
HOH
151
B
HOH
98
8
HOH
HOH
152
B
HOH
103
8
HOH
HOH
153
B
HOH
154
8
HOH
HOH
154
B
HOH
109
8
HOH
HOH
155
B
HOH
156
8
HOH
HOH
156
B
HOH
157
8
HOH
HOH
157
B
HOH
111
8
HOH
HOH
158
B
HOH
159
8
HOH
HOH
159
B
HOH
116
8
HOH
HOH
160
B
HOH
119
8
HOH
HOH
161
B
HOH
120
8
HOH
HOH
162
B
HOH
122
8
HOH
HOH
163
B
HOH
164
8
HOH
HOH
164
B
HOH
124
8
HOH
HOH
165
B
HOH
133
8
HOH
HOH
166
B
HOH
136
8
HOH
HOH
167
B
HOH
168
8
HOH
HOH
168
B
HOH
138
8
HOH
HOH
169
B
HOH
171
8
HOH
HOH
171
B
HOH
6
8
HOH
HOH
6
C
HOH
9
8
HOH
HOH
9
C
HOH
13
8
HOH
HOH
13
C
HOH
14
8
HOH
HOH
14
C
HOH
39
8
HOH
HOH
39
C
HOH
46
8
HOH
HOH
46
C
HOH
50
8
HOH
HOH
50
C
HOH
52
8
HOH
HOH
52
C
HOH
56
8
HOH
HOH
56
C
HOH
58
8
HOH
HOH
58
C
HOH
65
8
HOH
HOH
65
C
HOH
1
8
HOH
HOH
145
C
HOH
146
8
HOH
HOH
146
C
HOH
147
8
HOH
HOH
147
C
HOH
84
8
HOH
HOH
148
C
HOH
92
8
HOH
HOH
149
C
HOH
94
8
HOH
HOH
150
C
HOH
105
8
HOH
HOH
151
C
HOH
118
8
HOH
HOH
152
C
HOH
123
8
HOH
HOH
153
C
HOH
125
8
HOH
HOH
154
C
HOH
155
8
HOH
HOH
155
C
HOH
126
8
HOH
HOH
156
C
HOH
129
8
HOH
HOH
157
C
HOH
130
8
HOH
HOH
158
C
HOH
131
8
HOH
HOH
159
C
HOH
10
8
HOH
HOH
10
D
HOH
17
8
HOH
HOH
17
D
HOH
20
8
HOH
HOH
20
D
HOH
24
8
HOH
HOH
24
D
HOH
29
8
HOH
HOH
29
D
HOH
31
8
HOH
HOH
31
D
HOH
34
8
HOH
HOH
34
D
HOH
38
8
HOH
HOH
38
D
HOH
51
8
HOH
HOH
51
D
HOH
55
8
HOH
HOH
55
D
HOH
57
8
HOH
HOH
57
D
HOH
59
8
HOH
HOH
59
D
HOH
60
8
HOH
HOH
60
D
HOH
66
8
HOH
HOH
66
D
HOH
70
8
HOH
HOH
70
D
HOH
75
8
HOH
HOH
75
D
HOH
77
8
HOH
HOH
77
D
HOH
81
8
HOH
HOH
144
D
HOH
88
8
HOH
HOH
145
D
HOH
91
8
HOH
HOH
146
D
HOH
93
8
HOH
HOH
147
D
HOH
99
8
HOH
HOH
148
D
HOH
149
8
HOH
HOH
149
D
HOH
150
8
HOH
HOH
150
D
HOH
104
8
HOH
HOH
151
D
HOH
152
8
HOH
HOH
152
D
HOH
106
8
HOH
HOH
153
D
HOH
107
8
HOH
HOH
154
D
HOH
108
8
HOH
HOH
155
D
HOH
110
8
HOH
HOH
156
D
HOH
115
8
HOH
HOH
157
D
HOH
121
8
HOH
HOH
158
D
HOH
128
8
HOH
HOH
159
D
HOH
132
8
HOH
HOH
160
D
HOH
135
8
HOH
HOH
161
D
HOH
162
8
HOH
HOH
162
D
HOH
139
8
HOH
HOH
163
D
HOH
173
8
HOH
HOH
173
D
HOH
102
8
HOH
HOH
102
E
HOH
112
8
HOH
HOH
112
E
HOH
163
8
HOH
HOH
163
E
HOH
165
8
HOH
HOH
165
E
HOH
40
8
HOH
HOH
40
F
HOH
61
8
HOH
HOH
61
F
HOH
127
8
HOH
HOH
127
F
1.680
1.680
36.340
36.340
n
1
80
A
GLY
81
n
2
GLY
81
A
THR
82
n
3
THR
82
A
GLY
83
n
4
GLY
83
A
VAL
84
n
5
VAL
84
A
THR
85
n
6
THR
85
A
LEU
86
n
7
LEU
86
A
PHE
87
n
8
PHE
87
A
VAL
88
n
9
VAL
88
A
ALA
89
n
10
ALA
89
A
LEU
90
n
11
LEU
90
A
TYR
91
n
12
TYR
91
A
ASP
92
n
13
ASP
92
A
TYR
93
n
14
TYR
93
A
GLU
94
n
15
GLU
94
A
ALA
95
n
16
ALA
95
A
ARG
96
n
17
ARG
96
A
THR
97
n
18
THR
97
A
GLU
98
n
19
GLU
98
A
ASP
99
n
20
ASP
99
A
ASP
100
n
21
ASP
100
A
LEU
101
n
22
LEU
101
A
SER
102
n
23
SER
102
A
PHE
103
n
24
PHE
103
A
HIS
104
n
25
HIS
104
A
LYS
105
n
26
LYS
105
A
GLY
106
n
27
GLY
106
A
GLU
107
n
28
GLU
107
A
LYS
108
n
29
LYS
108
A
PHE
109
n
30
PHE
109
A
GLN
110
n
31
GLN
110
A
ILE
111
n
32
ILE
111
A
LEU
112
n
33
LEU
112
A
ASN
113
n
34
ASN
113
A
SER
114
n
35
SER
114
A
SER
115
n
36
SER
115
A
GLU
116
n
37
GLU
116
A
GLY
117
n
38
GLY
117
A
ASP
118
n
39
ASP
118
A
TRP
119
n
40
TRP
119
A
TRP
120
n
41
TRP
120
A
GLU
121
n
42
GLU
121
A
ALA
122
n
43
ALA
122
A
ARG
123
n
44
ARG
123
A
SER
124
n
45
SER
124
A
LEU
125
n
46
LEU
125
A
THR
126
n
47
THR
126
A
THR
127
n
48
THR
127
A
GLY
128
n
49
GLY
128
A
GLU
129
n
50
GLU
129
A
THR
130
n
51
THR
130
A
GLY
131
n
52
GLY
131
A
TYR
132
n
53
TYR
132
A
ILE
133
n
54
ILE
133
A
PRO
134
n
55
PRO
134
A
SER
135
n
56
SER
135
A
ASN
136
n
57
ASN
136
A
TYR
137
n
58
TYR
137
A
VAL
138
n
59
VAL
138
A
ALA
139
n
60
ALA
139
A
PRO
140
n
61
PRO
140
A
VAL
141
n
62
VAL
141
A
ASP
142
n
63
ASP
142
A
SER
143
n
64
SER
143
A
n
1
80
B
GLY
81
n
2
GLY
81
B
THR
82
n
3
THR
82
B
GLY
83
n
4
GLY
83
B
VAL
84
n
5
VAL
84
B
THR
85
n
6
THR
85
B
LEU
86
n
7
LEU
86
B
PHE
87
n
8
PHE
87
B
VAL
88
n
9
VAL
88
B
ALA
89
n
10
ALA
89
B
LEU
90
n
11
LEU
90
B
TYR
91
n
12
TYR
91
B
ASP
92
n
13
ASP
92
B
TYR
93
n
14
TYR
93
B
GLU
94
n
15
GLU
94
B
ALA
95
n
16
ALA
95
B
ARG
96
n
17
ARG
96
B
THR
97
n
18
THR
97
B
GLU
98
n
19
GLU
98
B
ASP
99
n
20
ASP
99
B
ASP
100
n
21
ASP
100
B
LEU
101
n
22
LEU
101
B
SER
102
n
23
SER
102
B
PHE
103
n
24
PHE
103
B
HIS
104
n
25
HIS
104
B
LYS
105
n
26
LYS
105
B
GLY
106
n
27
GLY
106
B
GLU
107
n
28
GLU
107
B
LYS
108
n
29
LYS
108
B
PHE
109
n
30
PHE
109
B
GLN
110
n
31
GLN
110
B
ILE
111
n
32
ILE
111
B
LEU
112
n
33
LEU
112
B
ASN
113
n
34
ASN
113
B
SER
114
n
35
SER
114
B
SER
115
n
36
SER
115
B
GLU
116
n
37
GLU
116
B
GLY
117
n
38
GLY
117
B
ASP
118
n
39
ASP
118
B
TRP
119
n
40
TRP
119
B
TRP
120
n
41
TRP
120
B
GLU
121
n
42
GLU
121
B
ALA
122
n
43
ALA
122
B
ARG
123
n
44
ARG
123
B
SER
124
n
45
SER
124
B
LEU
125
n
46
LEU
125
B
THR
126
n
47
THR
126
B
THR
127
n
48
THR
127
B
GLY
128
n
49
GLY
128
B
GLU
129
n
50
GLU
129
B
THR
130
n
51
THR
130
B
GLY
131
n
52
GLY
131
B
TYR
132
n
53
TYR
132
B
ILE
133
n
54
ILE
133
B
PRO
134
n
55
PRO
134
B
SER
135
n
56
SER
135
B
ASN
136
n
57
ASN
136
B
TYR
137
n
58
TYR
137
B
VAL
138
n
59
VAL
138
B
ALA
139
n
60
ALA
139
B
PRO
140
n
61
PRO
140
B
VAL
141
n
62
VAL
141
B
ASP
142
n
63
ASP
142
B
SER
143
n
64
SER
143
B
n
1
80
C
n
2
81
C
n
3
82
C
GLY
83
n
4
GLY
83
C
VAL
84
n
5
VAL
84
C
THR
85
n
6
THR
85
C
LEU
86
n
7
LEU
86
C
PHE
87
n
8
PHE
87
C
VAL
88
n
9
VAL
88
C
ALA
89
n
10
ALA
89
C
LEU
90
n
11
LEU
90
C
TYR
91
n
12
TYR
91
C
ASP
92
n
13
ASP
92
C
TYR
93
n
14
TYR
93
C
GLU
94
n
15
GLU
94
C
ALA
95
n
16
ALA
95
C
ARG
96
n
17
ARG
96
C
THR
97
n
18
THR
97
C
GLU
98
n
19
GLU
98
C
ASP
99
n
20
ASP
99
C
ASP
100
n
21
ASP
100
C
LEU
101
n
22
LEU
101
C
SER
102
n
23
SER
102
C
PHE
103
n
24
PHE
103
C
HIS
104
n
25
HIS
104
C
LYS
105
n
26
LYS
105
C
GLY
106
n
27
GLY
106
C
GLU
107
n
28
GLU
107
C
LYS
108
n
29
LYS
108
C
PHE
109
n
30
PHE
109
C
GLN
110
n
31
GLN
110
C
ILE
111
n
32
ILE
111
C
LEU
112
n
33
LEU
112
C
ASN
113
n
34
ASN
113
C
SER
114
n
35
SER
114
C
SER
115
n
36
SER
115
C
GLU
116
n
37
GLU
116
C
GLY
117
n
38
GLY
117
C
ASP
118
n
39
ASP
118
C
TRP
119
n
40
TRP
119
C
TRP
120
n
41
TRP
120
C
GLU
121
n
42
GLU
121
C
ALA
122
n
43
ALA
122
C
ARG
123
n
44
ARG
123
C
SER
124
n
45
SER
124
C
LEU
125
n
46
LEU
125
C
THR
126
n
47
THR
126
C
THR
127
n
48
THR
127
C
GLY
128
n
49
GLY
128
C
GLU
129
n
50
GLU
129
C
THR
130
n
51
THR
130
C
GLY
131
n
52
GLY
131
C
TYR
132
n
53
TYR
132
C
ILE
133
n
54
ILE
133
C
PRO
134
n
55
PRO
134
C
SER
135
n
56
SER
135
C
ASN
136
n
57
ASN
136
C
TYR
137
n
58
TYR
137
C
VAL
138
n
59
VAL
138
C
ALA
139
n
60
ALA
139
C
PRO
140
n
61
PRO
140
C
VAL
141
n
62
VAL
141
C
n
63
142
C
n
64
143
C
n
1
80
D
n
2
81
D
n
3
82
D
GLY
83
n
4
GLY
83
D
VAL
84
n
5
VAL
84
D
THR
85
n
6
THR
85
D
LEU
86
n
7
LEU
86
D
PHE
87
n
8
PHE
87
D
VAL
88
n
9
VAL
88
D
ALA
89
n
10
ALA
89
D
LEU
90
n
11
LEU
90
D
TYR
91
n
12
TYR
91
D
ASP
92
n
13
ASP
92
D
TYR
93
n
14
TYR
93
D
GLU
94
n
15
GLU
94
D
ALA
95
n
16
ALA
95
D
ARG
96
n
17
ARG
96
D
THR
97
n
18
THR
97
D
GLU
98
n
19
GLU
98
D
ASP
99
n
20
ASP
99
D
ASP
100
n
21
ASP
100
D
LEU
101
n
22
LEU
101
D
SER
102
n
23
SER
102
D
PHE
103
n
24
PHE
103
D
HIS
104
n
25
HIS
104
D
LYS
105
n
26
LYS
105
D
GLY
106
n
27
GLY
106
D
GLU
107
n
28
GLU
107
D
LYS
108
n
29
LYS
108
D
PHE
109
n
30
PHE
109
D
GLN
110
n
31
GLN
110
D
ILE
111
n
32
ILE
111
D
LEU
112
n
33
LEU
112
D
ASN
113
n
34
ASN
113
D
SER
114
n
35
SER
114
D
SER
115
n
36
SER
115
D
GLU
116
n
37
GLU
116
D
GLY
117
n
38
GLY
117
D
ASP
118
n
39
ASP
118
D
TRP
119
n
40
TRP
119
D
TRP
120
n
41
TRP
120
D
GLU
121
n
42
GLU
121
D
ALA
122
n
43
ALA
122
D
ARG
123
n
44
ARG
123
D
SER
124
n
45
SER
124
D
LEU
125
n
46
LEU
125
D
THR
126
n
47
THR
126
D
THR
127
n
48
THR
127
D
GLY
128
n
49
GLY
128
D
GLU
129
n
50
GLU
129
D
THR
130
n
51
THR
130
D
GLY
131
n
52
GLY
131
D
TYR
132
n
53
TYR
132
D
ILE
133
n
54
ILE
133
D
PRO
134
n
55
PRO
134
D
SER
135
n
56
SER
135
D
ASN
136
n
57
ASN
136
D
TYR
137
n
58
TYR
137
D
VAL
138
n
59
VAL
138
D
ALA
139
n
60
ALA
139
D
PRO
140
n
61
PRO
140
D
VAL
141
n
62
VAL
141
D
ASP
142
n
63
ASP
142
D
SER
143
n
64
SER
143
D
ACE
0
n
1
ACE
0
E
ALA
1
n
2
ALA
1
E
PRO
2
n
3
PRO
2
E
PRO
3
n
4
PRO
3
E
ILE
4
n
5
ILE
4
E
PRO
5
n
6
PRO
5
E
PRO
6
n
7
PRO
6
E
PRO
7
n
8
PRO
7
E
ARG
8
n
9
ARG
8
E
n
10
9
E
n
11
10
E
n
12
11
E
n
1
0
F
ALA
1
n
2
ALA
1
F
PRO
2
n
3
PRO
2
F
PRO
3
n
4
PRO
3
F
ILE
4
n
5
ILE
4
F
PRO
5
n
6
PRO
5
F
PRO
6
n
7
PRO
6
F
PRO
7
n
8
PRO
7
F
ARG
8
n
9
ARG
8
F
n
10
9
F
n
11
10
F
n
12
11
F
author_defined_assembly
2
dimeric
author_defined_assembly
2
dimeric
author_defined_assembly
1
monomeric
author_defined_assembly
1
monomeric
A
GLY
83
A
O
GLY
4
1_555
A
NA
145
I
NA
NA
1_555
A
HOH
167
N
O
HOH
1_555
85.1
A
GLY
83
A
O
GLY
4
1_555
A
NA
145
I
NA
NA
1_555
B
GLY
83
B
O
GLY
4
1_555
167.0
A
HOH
167
N
O
HOH
1_555
A
NA
145
I
NA
NA
1_555
B
GLY
83
B
O
GLY
4
1_555
82.5
A
GLY
83
A
O
GLY
4
1_555
A
NA
145
I
NA
NA
1_555
D
HOH
66
Q
O
HOH
1_555
107.3
A
HOH
167
N
O
HOH
1_555
A
NA
145
I
NA
NA
1_555
D
HOH
66
Q
O
HOH
1_555
131.6
B
GLY
83
B
O
GLY
4
1_555
A
NA
145
I
NA
NA
1_555
D
HOH
66
Q
O
HOH
1_555
78.6
C
HIS
104
C
ND1
HIS
25
1_555
C
ZN
1
J
ZN
ZN
1_555
C
GLU
107
C
OE2
GLU
28
1_555
107.8
C
HIS
104
C
ND1
HIS
25
1_555
C
ZN
1
J
ZN
ZN
1_555
C
FMT
144
K
O2
FMT
1_555
119.4
C
GLU
107
C
OE2
GLU
28
1_555
C
ZN
1
J
ZN
ZN
1_555
C
FMT
144
K
O2
FMT
1_555
111.8
D
FMT
1
M
O1
FMT
1_555
D
ZN
2
L
ZN
ZN
1_555
D
HIS
104
D
ND1
HIS
25
1_555
115.8
D
FMT
1
M
O1
FMT
1_555
D
ZN
2
L
ZN
ZN
1_555
D
GLU
107
D
OE2
GLU
28
1_555
116.2
D
HIS
104
D
ND1
HIS
25
1_555
D
ZN
2
L
ZN
ZN
1_555
D
GLU
107
D
OE2
GLU
28
1_555
102.8
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
GLY
131
A
O
GLY
52
A
N
ALA
122
A
N
ALA
43
A
O
GLU
121
A
O
GLU
42
A
N
LEU
112
A
N
LEU
33
A
O
PHE
109
A
O
PHE
30
A
N
PHE
87
A
N
PHE
8
A
N
VAL
88
A
N
VAL
9
A
O
ALA
139
A
O
ALA
60
B
O
GLY
131
B
O
GLY
52
B
N
ALA
122
B
N
ALA
43
B
O
ARG
123
B
O
ARG
44
B
N
GLN
110
B
N
GLN
31
B
O
PHE
109
B
O
PHE
30
B
N
PHE
87
B
N
PHE
8
B
N
VAL
88
B
N
VAL
9
B
O
ALA
139
B
O
ALA
60
C
O
GLY
131
C
O
GLY
52
C
N
ALA
122
C
N
ALA
43
C
O
GLU
121
C
O
GLU
42
C
N
LEU
112
C
N
LEU
33
C
O
PHE
109
C
O
PHE
30
C
N
PHE
87
C
N
PHE
8
C
N
VAL
88
C
N
VAL
9
C
O
ALA
139
C
O
ALA
60
D
O
GLY
131
D
O
GLY
52
D
N
ALA
122
D
N
ALA
43
D
O
GLU
121
D
O
GLU
42
D
N
LEU
112
D
N
LEU
33
D
O
PHE
109
D
O
PHE
30
D
N
PHE
87
D
N
PHE
8
D
N
VAL
88
D
N
VAL
9
D
O
ALA
139
D
O
ALA
60
1
F
HOH
40
S
HOH
1
A
MET
80
A
MET
1
1
Y
1
B
MET
80
B
MET
1
1
Y
1
C
MET
80
C
MET
1
1
Y
1
C
GLY
81
C
GLY
2
1
Y
1
C
THR
82
C
THR
3
1
Y
1
C
ASP
142
C
ASP
63
1
Y
1
C
SER
143
C
SER
64
1
Y
1
D
MET
80
D
MET
1
1
Y
1
D
GLY
81
D
GLY
2
1
Y
1
D
THR
82
D
THR
3
1
Y
1
E
ARG
9
E
ARG
10
1
Y
1
E
LYS
10
E
LYS
11
1
Y
1
E
ARG
11
E
ARG
12
1
Y
1
F
ACE
0
F
ACE
1
1
Y
1
F
ARG
9
F
ARG
10
1
Y
1
F
LYS
10
F
LYS
11
1
Y
1
F
ARG
11
F
ARG
12
1
Y
1
A
GLU
116
-107.80
53.38
91.820
22.9771
9.640
0.9600
0.0000
0.0000
0.9600
0.0000
-1.9200
0.9560
0.9440
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
U VALUES : REFINED INDIVIDUALLY
0.2314
0.1853
0.1899
0.1899
1.500
15.0
4012
41084
40262
10.0
98.22
0.2460
0.1914
1.000
0.500
0.8653
3.1540
0.0540
0.1095
0.0904
RANDOM
1
THROUGHOUT
0.0
0
MOLECULAR REPLACEMENT
0.110
0.0900
0.8000
0.8000
1.4000
PDB ENTRY 1SHF
MAXIMUM LIKELIHOOD
MASK
1.500
15.0
173
2266
16
0
2077
0.018
0.022
2146
1.877
1.951
2924
7.485
5.000
256
32.177
24.286
105
12.813
15.000
306
20.483
15.000
10
0.153
0.200
308
0.014
0.021
1682
3.322
1.500
1307
4.559
2.000
2100
5.818
3.000
839
7.904
4.500
824
3.554
3.000
2146
1
A
1
120
X-RAY DIFFRACTION
TIGHT POSITIONAL
0.230
0.050
2
B
1
120
X-RAY DIFFRACTION
TIGHT POSITIONAL
0.220
0.050
3
C
1
120
X-RAY DIFFRACTION
TIGHT POSITIONAL
0.230
0.050
4
D
1
120
X-RAY DIFFRACTION
TIGHT POSITIONAL
0.240
0.050
1
A
1
223
X-RAY DIFFRACTION
MEDIUM POSITIONAL
0.510
0.500
2
B
1
223
X-RAY DIFFRACTION
MEDIUM POSITIONAL
0.850
0.500
3
C
1
223
X-RAY DIFFRACTION
MEDIUM POSITIONAL
0.640
0.500
4
D
1
223
X-RAY DIFFRACTION
MEDIUM POSITIONAL
0.760
0.500
1
A
1
93
X-RAY DIFFRACTION
LOOSE POSITIONAL
0.630
5.000
2
B
1
93
X-RAY DIFFRACTION
LOOSE POSITIONAL
0.500
5.000
3
C
1
93
X-RAY DIFFRACTION
LOOSE POSITIONAL
0.460
5.000
4
D
1
93
X-RAY DIFFRACTION
LOOSE POSITIONAL
0.490
5.000
1
A
1
120
X-RAY DIFFRACTION
TIGHT THERMAL
3.150
0.500
2
B
1
120
X-RAY DIFFRACTION
TIGHT THERMAL
3.680
0.500
3
C
1
120
X-RAY DIFFRACTION
TIGHT THERMAL
3.470
0.500
4
D
1
120
X-RAY DIFFRACTION
TIGHT THERMAL
3.340
0.500
1
A
1
223
X-RAY DIFFRACTION
MEDIUM THERMAL
3.380
2.000
2
B
1
223
X-RAY DIFFRACTION
MEDIUM THERMAL
3.630
2.000
3
C
1
223
X-RAY DIFFRACTION
MEDIUM THERMAL
3.670
2.000
4
D
1
223
X-RAY DIFFRACTION
MEDIUM THERMAL
3.280
2.000
1
A
1
93
X-RAY DIFFRACTION
LOOSE THERMAL
3.360
10.000
2
B
1
93
X-RAY DIFFRACTION
LOOSE THERMAL
3.980
10.000
3
C
1
93
X-RAY DIFFRACTION
LOOSE THERMAL
3.710
10.000
4
D
1
93
X-RAY DIFFRACTION
LOOSE THERMAL
3.350
10.000
0.2970
0.2280
1.539
262
2687
2949
20
99.93
17.476
1.450
49.526
3UA7
44446
44446
0
0
0.095
0.095
1
9.1
5.4
98.3
0.454
1.450
1.530
1.6
36494
6480
0.454
1
5.6
100.0
0.295
1.530
1.620
2.5
34505
6154
0.295
1
5.6
99.9
0.189
1.620
1.730
3.7
32329
5767
0.189
1
5.6
99.6
0.137
1.730
1.870
4.7
29978
5336
0.137
1
5.6
99.0
0.101
1.870
2.050
5.7
27533
4895
0.101
1
5.6
98.0
0.081
2.050
2.290
7.3
24393
4420
0.081
1
5.5
97.7
0.087
2.290
2.650
6.3
20609
3933
0.087
1
5.2
97.4
0.090
2.650
3.240
6.1
15952
3400
0.090
1
4.7
97.5
0.076
3.240
4.590
7.9
11618
2666
0.076
1
4.4
96.8
0.081
4.590
19.540
6.7
6300
1395
0.081
1
4.5
85.2
data reduction
Andrew G.W. Leslie
andrew@mrc-lmb.cam.ac.uk
2010/01/06
http://www.mrc-lmb.cam.ac.uk/harry/mosflm/
MOSFLM
package
3.3.16
data scaling
Phil R. Evans
pre@mrc-lmb.cam.ac.uk
2010/01/06
Fortran_77
http://www.ccp4.ac.uk/dist/html/scala.html
SCALA
other
3.3.16
phasing
Alexei Vaguine
alexei@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/molrep.html
MOLREP
program
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
data extraction
PDB
deposit@deposit.rcsb.org
June 10, 2010
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.10
data collection
ADSC
Quantum
Crystal Structure of the Human Fyn SH3 domain in complex with a peptide from the Hepatitis C virus NS5A-protein
1
N
N
1
N
N
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
7
N
N
6
N
N
7
N
N
8
N
N
8
N
N
8
N
N
8
N
N
8
N
N
8
N
N
covale
1.331
both
E
ACE
0
E
C
ACE
1
1_555
E
ALA
1
E
N
ALA
2
1_555
metalc
2.162
A
GLY
83
A
O
GLY
4
1_555
A
NA
145
I
NA
NA
1_555
metalc
2.496
A
NA
145
I
NA
NA
1_555
A
HOH
167
N
O
HOH
1_555
metalc
2.367
A
NA
145
I
NA
NA
1_555
B
GLY
83
B
O
GLY
4
1_555
metalc
2.628
A
NA
145
I
NA
NA
1_555
D
HOH
66
Q
O
HOH
1_555
metalc
2.091
C
ZN
1
J
ZN
ZN
1_555
C
HIS
104
C
ND1
HIS
25
1_555
metalc
1.985
C
ZN
1
J
ZN
ZN
1_555
C
GLU
107
C
OE2
GLU
28
1_555
metalc
1.855
C
ZN
1
J
ZN
ZN
1_555
C
FMT
144
K
O2
FMT
1_555
metalc
1.947
D
FMT
1
M
O1
FMT
1_555
D
ZN
2
L
ZN
ZN
1_555
metalc
2.064
D
ZN
2
L
ZN
ZN
1_555
D
HIS
104
D
ND1
HIS
25
1_555
metalc
1.999
D
ZN
2
L
ZN
ZN
1_555
D
GLU
107
D
OE2
GLU
28
1_555
TRANSFERASE/VIRAL PROTEIN
beta barrel, kinase, poly proline rich motif, TRANSFERASE-VIRAL PROTEIN complex
A
B
C
D
A
THR
85
A
THR
6
A
SER
114
A
SER
35
2
B
THR
85
B
THR
6
B
SER
114
B
SER
35
2
C
THR
85
C
THR
6
C
SER
114
C
SER
35
2
D
THR
85
D
THR
6
D
SER
114
D
SER
35
2
A
ASP
118
A
ASP
39
A
PRO
140
A
PRO
61
5
B
ASP
118
B
ASP
39
B
PRO
140
B
PRO
61
5
C
ASP
118
C
ASP
39
C
PRO
140
C
PRO
61
5
D
ASP
118
D
ASP
39
D
PRO
140
D
PRO
61
5
FYN_HUMAN
UNP
1
81
P06241
GTGVTLFVALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPVDS
Q9YKI6_9HEPC
UNP
2
350
Q9YKI6
APPIPPPRRKR
81
143
3UA7
81
143
P06241
A
1
2
64
81
143
3UA7
81
143
P06241
B
1
2
64
81
143
3UA7
81
143
P06241
C
1
2
64
81
143
3UA7
81
143
P06241
D
1
2
64
350
360
3UA7
1
11
Q9YKI6
E
2
2
12
350
360
3UA7
1
11
Q9YKI6
F
2
2
12
1
initiating methionine
MET
80
3UA7
A
P06241
UNP
1
2
initiating methionine
MET
80
3UA7
B
P06241
UNP
1
3
initiating methionine
MET
80
3UA7
C
P06241
UNP
1
4
initiating methionine
MET
80
3UA7
D
P06241
UNP
1
5
acetylation
ACE
0
3UA7
E
Q9YKI6
UNP
1
6
acetylation
ACE
0
3UA7
F
Q9YKI6
UNP
1
5
5
5
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
THR
130
A
THR
51
A
PRO
134
A
PRO
55
A
TRP
119
A
TRP
40
A
SER
124
A
SER
45
A
LYS
108
A
LYS
29
A
ASN
113
A
ASN
34
A
PHE
87
A
PHE
8
A
ALA
89
A
ALA
10
A
VAL
138
A
VAL
59
A
PRO
140
A
PRO
61
B
THR
130
B
THR
51
B
PRO
134
B
PRO
55
B
TRP
119
B
TRP
40
B
SER
124
B
SER
45
B
LYS
108
B
LYS
29
B
ASN
113
B
ASN
34
B
PHE
87
B
PHE
8
B
ALA
89
B
ALA
10
B
VAL
138
B
VAL
59
B
PRO
140
B
PRO
61
C
THR
130
C
THR
51
C
PRO
134
C
PRO
55
C
TRP
119
C
TRP
40
C
SER
124
C
SER
45
C
LYS
108
C
LYS
29
C
ASN
113
C
ASN
34
C
PHE
87
C
PHE
8
C
ALA
89
C
ALA
10
C
VAL
138
C
VAL
59
C
PRO
140
C
PRO
61
D
THR
130
D
THR
51
D
PRO
134
D
PRO
55
D
TRP
119
D
TRP
40
D
SER
124
D
SER
45
D
LYS
108
D
LYS
29
D
ASN
113
D
ASN
34
D
LEU
86
D
LEU
7
D
ALA
89
D
ALA
10
D
VAL
138
D
VAL
59
D
PRO
140
D
PRO
61
BINDING SITE FOR RESIDUE ZN C 1
C
ZN
1
Software
4
BINDING SITE FOR RESIDUE ZN D 2
D
ZN
2
Software
4
BINDING SITE FOR RESIDUE GOL A 1
A
GOL
1
Software
4
BINDING SITE FOR RESIDUE FMT D 1
D
FMT
1
Software
8
BINDING SITE FOR RESIDUE FMT C 144
C
FMT
144
Software
7
BINDING SITE FOR RESIDUE CL A 144
A
CL
144
Software
4
BINDING SITE FOR RESIDUE NA A 145
A
NA
145
Software
4
B
HIS
104
B
HIS
25
4
6_444
C
HIS
104
C
HIS
25
4
1_555
C
GLU
107
C
GLU
28
4
1_555
C
FMT
144
K
FMT
4
1_555
A
HIS
104
A
HIS
25
4
6_544
D
FMT
1
M
FMT
4
1_555
D
HIS
104
D
HIS
25
4
1_555
D
GLU
107
D
GLU
28
4
1_555
A
THR
97
A
THR
18
4
1_555
A
ASP
100
A
ASP
21
4
1_555
A
TRP
119
A
TRP
40
4
1_555
A
TYR
132
A
TYR
53
4
1_555
A
HIS
104
A
HIS
25
8
6_544
D
ZN
2
L
ZN
8
1_555
D
HOH
75
Q
HOH
8
1_555
D
SER
102
D
SER
23
8
1_555
D
PHE
103
D
PHE
24
8
1_555
D
HIS
104
D
HIS
25
8
1_555
D
GLU
107
D
GLU
28
8
1_555
D
HOH
158
Q
HOH
8
1_555
B
HIS
104
B
HIS
25
7
6_444
C
ZN
1
J
ZN
7
1_555
C
SER
102
C
SER
23
7
1_555
C
PHE
103
C
PHE
24
7
1_555
C
HIS
104
C
HIS
25
7
1_555
C
GLU
107
C
GLU
28
7
1_555
C
HOH
154
P
HOH
7
1_555
A
THR
127
A
THR
48
4
1_555
D
VAL
88
D
VAL
9
4
6_444
D
GLY
106
D
GLY
27
4
6_444
D
LYS
108
D
LYS
29
4
6_444
A
GLY
83
A
GLY
4
4
1_555
A
HOH
167
N
HOH
4
1_555
B
GLY
83
B
GLY
4
4
1_555
D
HOH
66
Q
HOH
4
1_555
92
P 41 21 2