0.008021
0.000000
0.001015
0.000000
0.024402
0.000000
0.000000
0.000000
0.019369
0.000000
0.000000
0.000000
Vandevenne, M.S.
Jacques, D.A.
Guss, J.M.
Mackay, J.P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.000
97.210
90.000
124.670
40.980
52.040
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
Cl -1
35.453
CHLORIDE ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
CL
N
59
N
N
N
60
R
C
N
61
N
C
N
62
N
O
N
63
N
C
N
64
N
S
N
65
N
O
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
O
N
74
N
P
N
75
N
O
N
76
N
O
N
77
N
O
N
78
N
C
N
79
R
C
N
80
N
O
N
81
S
C
N
82
N
O
N
83
N
C
N
84
R
C
Y
85
N
N
Y
86
N
C
Y
87
N
N
Y
88
N
C
Y
89
N
C
N
90
N
N
Y
91
N
N
Y
92
N
C
Y
93
N
N
Y
94
N
C
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
O
N
110
N
P
N
111
N
O
N
112
N
O
N
113
N
O
N
114
N
C
N
115
R
C
N
116
N
O
N
117
S
C
N
118
N
O
N
119
N
C
N
120
R
C
N
121
N
N
N
122
N
C
N
123
N
O
N
124
N
N
N
125
N
C
N
126
N
N
N
127
N
C
N
128
N
C
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
O
N
144
N
P
N
145
N
O
N
146
N
O
N
147
N
O
N
148
N
C
N
149
R
C
N
150
N
O
N
151
S
C
N
152
N
O
N
153
N
C
N
154
R
C
Y
155
N
N
Y
156
N
C
Y
157
N
N
Y
158
N
C
N
159
N
C
N
160
N
O
N
161
N
N
N
162
N
C
N
163
N
N
N
164
N
N
Y
165
N
C
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
O
N
181
N
P
N
182
N
O
N
183
N
O
N
184
N
O
N
185
N
C
N
186
R
C
N
187
N
O
N
188
S
C
N
189
N
O
N
190
N
C
N
191
R
C
N
192
N
N
N
193
N
C
N
194
N
O
N
195
N
N
N
196
N
C
N
197
N
O
N
198
N
C
N
199
N
C
N
200
N
C
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
N
C
N
221
N
C
N
222
N
C
N
223
N
O
N
224
N
N
N
225
N
O
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
N
C
N
241
N
C
N
242
N
C
N
243
N
O
N
244
N
O
N
245
N
O
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
N
N
256
N
C
N
257
N
C
N
258
N
O
N
259
N
O
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
N
N
266
S
C
N
267
N
C
N
268
N
O
N
269
N
C
Y
270
N
C
Y
271
N
N
Y
272
N
C
Y
273
N
C
Y
274
N
N
N
275
N
O
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
O
N
287
N
H
N
288
N
H
N
289
N
N
N
290
S
C
N
291
N
C
N
292
N
O
N
293
S
C
N
294
N
C
N
295
N
C
N
296
N
C
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
N
N
312
S
C
N
313
N
C
N
314
N
O
N
315
N
C
N
316
N
C
N
317
N
C
N
318
N
C
N
319
N
O
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
N
N
334
S
C
N
335
N
C
N
336
N
O
N
337
N
C
N
338
N
C
N
339
N
C
N
340
N
C
N
341
N
N
N
342
N
O
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
N
C
Y
363
N
C
Y
364
N
C
Y
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
C
N
369
N
O
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
N
N
382
S
C
N
383
N
C
N
384
N
O
N
385
N
C
N
386
N
C
N
387
N
C
N
388
N
O
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
N
N
399
S
C
N
400
N
C
N
401
N
O
N
402
N
C
N
403
N
O
N
404
N
O
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
N
N
413
S
C
N
414
N
C
N
415
N
O
N
416
R
C
N
417
N
O
N
418
N
C
N
419
N
O
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
N
N
430
S
C
N
431
N
C
N
432
N
O
N
433
N
C
Y
434
N
C
Y
435
N
C
Y
436
N
C
Y
437
N
C
Y
438
N
C
Y
439
N
C
N
440
N
O
N
441
N
O
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
doub
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
Y
91
N
sing
Y
92
N
sing
Y
93
N
doub
N
94
N
sing
Y
95
N
sing
Y
96
N
sing
Y
97
N
doub
N
98
N
sing
Y
99
N
doub
N
100
N
sing
N
101
N
sing
Y
102
N
sing
Y
103
N
doub
N
104
N
sing
Y
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
doub
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
doub
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
Y
164
N
sing
Y
165
N
sing
Y
166
N
doub
N
167
N
sing
Y
168
N
sing
N
169
N
sing
Y
170
N
doub
N
171
N
doub
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
doub
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
doub
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
doub
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
doub
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
doub
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
doub
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
doub
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
doub
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
doub
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
doub
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
Y
274
N
sing
Y
275
N
doub
Y
276
N
doub
N
277
N
sing
Y
278
N
sing
N
279
N
sing
Y
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
doub
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
doub
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
doub
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
doub
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
Y
363
N
doub
Y
364
N
sing
Y
365
N
sing
N
366
N
sing
Y
367
N
doub
N
368
N
sing
Y
369
N
doub
N
370
N
sing
Y
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
doub
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
doub
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
doub
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
doub
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
Y
432
N
doub
Y
433
N
sing
Y
434
N
sing
N
435
N
sing
Y
436
N
doub
N
437
N
sing
Y
438
N
doub
N
439
N
sing
Y
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
To be Published
0353
Rediscovering DNA recognition by classical Zinc Fingers.
10.2210/pdb3uk3/pdb
pdb_00003uk3
100
1
osmic mirrors
IMAGE PLATE
2011-10-07
MAR scanner 345 mm plate
OSMIC VARIMAX
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU MICROMAX-007 HF
6123.977
5'-D(*TP*TP*TP*GP*CP*AP*GP*AP*AP*TP*CP*GP*AP*TP*TP*CP*TP*GP*CP*A)-3'
1
syn
polymer
6142.004
5'-D(*AP*AP*TP*GP*CP*AP*GP*AP*AP*TP*CP*GP*AP*TP*TP*CP*TP*GP*CP*A)-3'
1
syn
polymer
6848.725
Zinc finger protein 217
Zinc fingers 6 and 7 (UNP RESIDUES 469-523)
2
man
polymer
65.409
ZINC ION
8
syn
non-polymer
35.453
CHLORIDE ION
1
syn
non-polymer
18.015
water
57
nat
water
transcription factor ZnF217
no
no
(DT)(DT)(DT)(DG)(DC)(DA)(DG)(DA)(DA)(DT)(DC)(DG)(DA)(DT)(DT)(DC)(DT)(DG)(DC)(DA)
TTTGCAGAATCGATTCTGCA
A
polydeoxyribonucleotide
no
no
(DA)(DA)(DT)(DG)(DC)(DA)(DG)(DA)(DA)(DT)(DC)(DG)(DA)(DT)(DT)(DC)(DT)(DG)(DC)(DA)
AATGCAGAATCGATTCTGCA
B
polydeoxyribonucleotide
no
no
GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK
GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK
C,D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
ZNF217, ZABC1
9606
Homo sapiens
562
Escherichia coli
Rosetta 2
plasmid
pMal
1
2.54
51.57
1.731
VAPOR DIFFUSION, HANGING DROP
6
0.01M Zinc chloride, 0.1M MES, 20% PEG 6000, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
-4.998
1
20
A
3
B
20
1.739
A_DT3:DA20_B
1
-8.678
-0.078
0.207
-0.083
-4.017
1
19
A
4
B
19
0.591
A_DG4:DC19_B
2
-5.796
-0.387
0.034
-0.228
-1.736
1
19
A
5
B
18
-0.592
A_DC5:DG18_B
3
-13.160
0.186
0.230
-0.203
0.329
1
20
A
6
B
17
5.285
A_DA6:DT17_B
4
-5.425
0.071
0.136
-0.160
14.484
1
19
A
7
B
16
0.441
A_DG7:DC16_B
5
-4.318
-0.231
0.086
-0.155
5.819
1
20
A
8
B
15
-6.147
A_DA8:DT15_B
6
-20.876
0.318
-0.071
-0.214
3.377
1
20
A
9
B
14
1.225
A_DA9:DT14_B
7
-19.067
-0.073
0.189
-0.134
-4.073
1
20
A
10
B
13
-1.410
A_DT10:DA13_B
8
-18.163
0.067
0.223
-0.014
5.829
1
19
A
11
B
12
0.254
A_DC11:DG12_B
9
-5.890
0.635
-0.217
-0.340
2.139
1
19
A
12
B
11
5.332
A_DG12:DC11_B
10
-18.288
0.008
-0.011
-0.069
1.232
1
20
A
13
B
10
0.216
A_DA13:DT10_B
11
-17.272
0.150
0.079
-0.117
0.873
1
20
A
14
B
9
-0.861
A_DT14:DA9_B
12
-18.045
0.019
0.233
-0.183
0.493
1
20
A
15
B
8
-2.921
A_DT15:DA8_B
13
-16.457
0.050
-0.176
-0.130
-14.136
1
19
A
16
B
7
0.328
A_DC16:DG7_B
14
-5.956
-0.108
0.032
-0.098
-1.840
1
20
A
17
B
6
1.186
A_DT17:DA6_B
15
-4.793
0.064
0.023
-0.213
-1.901
1
19
A
18
B
5
-8.049
A_DG18:DC5_B
16
-8.320
0.146
0.069
-0.202
6.052
1
19
A
19
B
4
-1.965
A_DC19:DG4_B
17
-2.818
0.306
-0.112
-0.295
6.430
1
20
A
20
B
3
3.393
A_DA20:DT3_B
18
-10.287
0.084
0.176
-0.121
3.032
28.360
A
A
3
4
9.490
B
B
20
19
3.222
4.630
-0.013
-0.927
AA_DT3DG4:DC19DA20_BB
1
-0.411
0.843
27.985
-2.920
-0.064
3.283
35.918
A
A
4
5
1.141
B
B
19
18
3.254
0.703
-1.008
-0.434
AA_DG4DC5:DG18DC19_BB
2
-1.479
2.399
35.882
-0.805
1.424
3.383
37.056
A
A
5
6
3.701
B
B
18
17
3.215
2.346
1.310
0.764
AA_DC5DA6:DT17DG18_BB
3
4.323
-6.821
36.740
0.883
-1.475
3.103
28.167
A
A
6
7
4.255
B
B
17
16
3.090
2.069
0.005
0.292
AA_DA6DG7:DC16DT17_BB
4
0.101
-0.208
28.092
0.141
0.013
3.626
43.807
A
A
7
8
-2.729
B
B
16
15
3.626
-2.035
-0.917
0.346
AA_DG7DA8:DT15DC16_BB
5
-0.999
1.339
43.751
0.678
1.124
3.225
41.472
A
A
8
9
-7.798
B
B
15
14
3.285
-5.501
0.105
0.097
AA_DA8DA9:DT14DT15_BB
6
-3.702
5.248
40.962
0.724
-0.544
3.446
35.120
A
A
9
10
-9.548
B
B
14
13
3.444
-5.736
-0.230
-0.242
AA_DA9DT10:DA13DT14_BB
7
-1.435
2.389
34.634
0.509
0.154
3.365
39.065
A
A
10
11
0.177
B
B
13
12
3.219
0.117
1.050
1.905
AA_DT10DC11:DG12DA13_BB
8
7.728
-11.628
38.322
2.834
-0.625
3.689
36.831
A
A
11
12
7.332
B
B
12
11
3.472
4.615
-0.559
1.712
AA_DC11DG12:DC11DG12_BB
9
-3.319
5.273
36.404
2.020
0.388
3.286
35.602
A
A
12
13
1.525
B
B
11
10
3.292
0.932
-0.005
0.051
AA_DG12DA13:DT10DC11_BB
10
-2.273
3.720
35.520
-0.053
-0.325
3.395
32.032
A
A
13
14
-11.673
B
B
10
9
3.332
-6.398
-0.026
-0.662
AA_DA13DT14:DA9DT10_BB
11
-1.591
2.902
31.364
-0.001
-0.252
3.252
39.140
A
A
14
15
-7.965
B
B
9
8
3.279
-5.312
-0.196
-0.265
AA_DT14DT15:DA8DA9_BB
12
3.881
-5.818
38.604
0.246
0.760
3.660
42.271
A
A
15
16
-2.153
B
B
8
7
3.638
-1.552
0.704
0.059
AA_DT15DC16:DG7DA8_BB
13
1.900
-2.637
42.203
0.259
-0.760
3.170
33.233
A
A
16
17
-3.851
B
B
7
6
3.194
-2.201
0.007
0.273
AA_DC16DT17:DA6DG7_BB
14
0.406
-0.710
33.160
0.836
0.053
3.443
38.616
A
A
17
18
8.258
B
B
6
5
3.286
5.427
-1.239
0.345
AA_DT17DG18:DC5DA6_BB
15
-5.563
8.466
37.856
-0.174
1.160
3.178
32.095
A
A
18
19
-2.263
B
B
5
4
3.119
-1.250
1.036
-0.109
AA_DG18DC19:DG4DC5_BB
16
2.016
-3.649
32.009
0.020
-1.524
3.031
32.340
A
A
19
20
13.831
B
B
4
3
3.280
7.634
-0.097
-0.704
AA_DC19DA20:DT3DG4_BB
17
-0.188
0.341
31.449
-2.586
0.142
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Data collection
Database references
Derived calculations
1
0
2012-12-05
1
1
2024-03-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
PDBJ
2011-11-08
REL
REL
ZN
ZINC ION
CL
CHLORIDE ION
HOH
water
ZN
2
4
ZN
ZN
21
B
ZN
2
4
ZN
ZN
22
B
ZN
967
4
ZN
ZN
967
C
ZN
968
4
ZN
ZN
968
C
ZN
1
4
ZN
ZN
1
C
CL
1
5
CL
CL
524
C
ZN
967
4
ZN
ZN
967
D
ZN
968
4
ZN
ZN
968
D
ZN
1
4
ZN
ZN
1
D
HOH
2
6
HOH
HOH
21
A
HOH
22
6
HOH
HOH
22
A
HOH
23
6
HOH
HOH
23
A
HOH
12
6
HOH
HOH
24
A
HOH
26
6
HOH
HOH
26
A
HOH
42
6
HOH
HOH
42
A
HOH
43
6
HOH
HOH
43
A
HOH
52
6
HOH
HOH
52
A
HOH
55
6
HOH
HOH
55
A
HOH
56
6
HOH
HOH
56
A
HOH
57
6
HOH
HOH
57
A
HOH
14
6
HOH
HOH
23
B
HOH
24
6
HOH
HOH
24
B
HOH
15
6
HOH
HOH
25
B
HOH
28
6
HOH
HOH
28
B
HOH
29
6
HOH
HOH
29
B
HOH
31
6
HOH
HOH
31
B
HOH
34
6
HOH
HOH
34
B
HOH
35
6
HOH
HOH
35
B
HOH
37
6
HOH
HOH
37
B
HOH
39
6
HOH
HOH
39
B
HOH
51
6
HOH
HOH
51
B
HOH
53
6
HOH
HOH
53
B
HOH
7
6
HOH
HOH
7
C
HOH
9
6
HOH
HOH
9
C
HOH
11
6
HOH
HOH
11
C
HOH
13
6
HOH
HOH
13
C
HOH
17
6
HOH
HOH
17
C
HOH
19
6
HOH
HOH
19
C
HOH
20
6
HOH
HOH
20
C
HOH
21
6
HOH
HOH
21
C
HOH
25
6
HOH
HOH
25
C
HOH
36
6
HOH
HOH
36
C
HOH
40
6
HOH
HOH
40
C
HOH
41
6
HOH
HOH
41
C
HOH
46
6
HOH
HOH
46
C
HOH
48
6
HOH
HOH
48
C
HOH
3
6
HOH
HOH
3
D
HOH
4
6
HOH
HOH
4
D
HOH
5
6
HOH
HOH
5
D
HOH
6
6
HOH
HOH
6
D
HOH
8
6
HOH
HOH
8
D
HOH
10
6
HOH
HOH
10
D
HOH
16
6
HOH
HOH
16
D
HOH
18
6
HOH
HOH
18
D
HOH
27
6
HOH
HOH
27
D
HOH
30
6
HOH
HOH
30
D
HOH
32
6
HOH
HOH
32
D
HOH
33
6
HOH
HOH
33
D
HOH
38
6
HOH
HOH
38
D
HOH
44
6
HOH
HOH
44
D
HOH
45
6
HOH
HOH
45
D
HOH
47
6
HOH
HOH
47
D
HOH
49
6
HOH
HOH
49
D
HOH
50
6
HOH
HOH
50
D
HOH
54
6
HOH
HOH
54
D
HOH
1
6
HOH
HOH
524
D
44.530
2.100
2.100
14.990
14.990
Phaser MODE: MR_AUTO
DT
1
n
1
DT
1
A
DT
2
n
2
DT
2
A
DT
3
n
3
DT
3
A
DG
4
n
4
DG
4
A
DC
5
n
5
DC
5
A
DA
6
n
6
DA
6
A
DG
7
n
7
DG
7
A
DA
8
n
8
DA
8
A
DA
9
n
9
DA
9
A
DT
10
n
10
DT
10
A
DC
11
n
11
DC
11
A
DG
12
n
12
DG
12
A
DA
13
n
13
DA
13
A
DT
14
n
14
DT
14
A
DT
15
n
15
DT
15
A
DC
16
n
16
DC
16
A
DT
17
n
17
DT
17
A
DG
18
n
18
DG
18
A
DC
19
n
19
DC
19
A
DA
20
n
20
DA
20
A
DA
1
n
1
DA
1
B
DA
2
n
2
DA
2
B
DT
3
n
3
DT
3
B
DG
4
n
4
DG
4
B
DC
5
n
5
DC
5
B
DA
6
n
6
DA
6
B
DG
7
n
7
DG
7
B
DA
8
n
8
DA
8
B
DA
9
n
9
DA
9
B
DT
10
n
10
DT
10
B
DC
11
n
11
DC
11
B
DG
12
n
12
DG
12
B
DA
13
n
13
DA
13
B
DT
14
n
14
DT
14
B
DT
15
n
15
DT
15
B
DC
16
n
16
DC
16
B
DT
17
n
17
DT
17
B
DG
18
n
18
DG
18
B
DC
19
n
19
DC
19
B
DA
20
n
20
DA
20
B
n
1
467
C
n
2
468
C
n
3
469
C
n
4
470
C
ARG
471
n
5
ARG
471
C
GLU
472
n
6
GLU
472
C
CYS
473
n
7
CYS
473
C
SER
474
n
8
SER
474
C
TYR
475
n
9
TYR
475
C
CYS
476
n
10
CYS
476
C
GLY
477
n
11
GLY
477
C
LYS
478
n
12
LYS
478
C
PHE
479
n
13
PHE
479
C
PHE
480
n
14
PHE
480
C
ARG
481
n
15
ARG
481
C
SER
482
n
16
SER
482
C
ASN
483
n
17
ASN
483
C
TYR
484
n
18
TYR
484
C
TYR
485
n
19
TYR
485
C
LEU
486
n
20
LEU
486
C
ASN
487
n
21
ASN
487
C
ILE
488
n
22
ILE
488
C
HIS
489
n
23
HIS
489
C
LEU
490
n
24
LEU
490
C
ARG
491
n
25
ARG
491
C
THR
492
n
26
THR
492
C
HIS
493
n
27
HIS
493
C
THR
494
n
28
THR
494
C
GLY
495
n
29
GLY
495
C
GLU
496
n
30
GLU
496
C
LYS
497
n
31
LYS
497
C
PRO
498
n
32
PRO
498
C
TYR
499
n
33
TYR
499
C
LYS
500
n
34
LYS
500
C
CYS
501
n
35
CYS
501
C
GLU
502
n
36
GLU
502
C
PHE
503
n
37
PHE
503
C
CYS
504
n
38
CYS
504
C
GLU
505
n
39
GLU
505
C
TYR
506
n
40
TYR
506
C
ALA
507
n
41
ALA
507
C
ALA
508
n
42
ALA
508
C
ALA
509
n
43
ALA
509
C
GLN
510
n
44
GLN
510
C
LYS
511
n
45
LYS
511
C
THR
512
n
46
THR
512
C
SER
513
n
47
SER
513
C
LEU
514
n
48
LEU
514
C
ARG
515
n
49
ARG
515
C
TYR
516
n
50
TYR
516
C
HIS
517
n
51
HIS
517
C
LEU
518
n
52
LEU
518
C
GLU
519
n
53
GLU
519
C
ARG
520
n
54
ARG
520
C
HIS
521
n
55
HIS
521
C
HIS
522
n
56
HIS
522
C
n
57
523
C
n
1
467
D
n
2
468
D
n
3
469
D
SER
470
n
4
SER
470
D
ARG
471
n
5
ARG
471
D
GLU
472
n
6
GLU
472
D
CYS
473
n
7
CYS
473
D
SER
474
n
8
SER
474
D
TYR
475
n
9
TYR
475
D
CYS
476
n
10
CYS
476
D
GLY
477
n
11
GLY
477
D
LYS
478
n
12
LYS
478
D
PHE
479
n
13
PHE
479
D
PHE
480
n
14
PHE
480
D
ARG
481
n
15
ARG
481
D
SER
482
n
16
SER
482
D
ASN
483
n
17
ASN
483
D
TYR
484
n
18
TYR
484
D
TYR
485
n
19
TYR
485
D
LEU
486
n
20
LEU
486
D
ASN
487
n
21
ASN
487
D
ILE
488
n
22
ILE
488
D
HIS
489
n
23
HIS
489
D
LEU
490
n
24
LEU
490
D
ARG
491
n
25
ARG
491
D
THR
492
n
26
THR
492
D
HIS
493
n
27
HIS
493
D
THR
494
n
28
THR
494
D
GLY
495
n
29
GLY
495
D
GLU
496
n
30
GLU
496
D
LYS
497
n
31
LYS
497
D
PRO
498
n
32
PRO
498
D
TYR
499
n
33
TYR
499
D
LYS
500
n
34
LYS
500
D
CYS
501
n
35
CYS
501
D
GLU
502
n
36
GLU
502
D
PHE
503
n
37
PHE
503
D
CYS
504
n
38
CYS
504
D
GLU
505
n
39
GLU
505
D
TYR
506
n
40
TYR
506
D
ALA
507
n
41
ALA
507
D
ALA
508
n
42
ALA
508
D
ALA
509
n
43
ALA
509
D
GLN
510
n
44
GLN
510
D
LYS
511
n
45
LYS
511
D
THR
512
n
46
THR
512
D
SER
513
n
47
SER
513
D
LEU
514
n
48
LEU
514
D
ARG
515
n
49
ARG
515
D
TYR
516
n
50
TYR
516
D
HIS
517
n
51
HIS
517
D
LEU
518
n
52
LEU
518
D
GLU
519
n
53
GLU
519
D
ARG
520
n
54
ARG
520
D
HIS
521
n
55
HIS
521
D
HIS
522
n
56
HIS
522
D
LYS
523
n
57
LYS
523
D
7.5836
3.7592
-0.1325
3.2506
0.7492
1.3724
-0.1464
0.2549
-0.6245
0.0032
0.0658
-0.2031
-0.0476
0.0163
0.0806
0.3060
-0.0165
-0.0127
0.1827
0.0340
0.1285
refined
19.3587
-1.5944
41.8660
X-RAY DIFFRACTION
6.5397
4.1170
1.4746
3.0718
0.8080
0.4202
-0.0019
-0.2089
0.1162
0.0538
-0.0558
-0.1092
-0.0196
0.0619
0.0577
0.3333
-0.0642
0.0141
0.3497
0.0125
0.2732
refined
26.5924
0.7169
41.8937
X-RAY DIFFRACTION
6.0867
0.9083
2.0865
6.5742
4.0467
9.0871
0.0374
0.6882
0.0845
-0.0557
-0.3277
-0.0172
-0.1135
-0.7093
0.2903
0.2714
-0.0103
0.0384
0.4702
0.0092
0.1212
refined
34.9097
8.4499
33.6502
X-RAY DIFFRACTION
4.8323
0.2189
0.9333
5.3419
0.0333
4.2381
-0.2372
0.4149
0.7919
-0.1501
-0.0706
0.2485
-0.3698
-0.1160
0.3078
0.3470
-0.0166
-0.0381
0.1553
0.1103
0.3243
refined
7.9806
-1.8645
32.4413
X-RAY DIFFRACTION
24.7229
10.6618
3.4996
17.9603
-6.8533
5.7343
-0.0959
0.2950
0.1378
0.2475
-0.5153
-0.9868
-0.1965
0.4129
0.6112
0.1579
0.0140
0.0270
0.2434
0.3615
0.7750
refined
22.0628
-0.4840
36.8457
X-RAY DIFFRACTION
A
1
A
20
X-RAY DIFFRACTION
1
B
1
B
20
X-RAY DIFFRACTION
2
C
471
C
522
X-RAY DIFFRACTION
3
D
470
D
523
X-RAY DIFFRACTION
4
C
1
C
1
X-RAY DIFFRACTION
5
B
21
B
21
X-RAY DIFFRACTION
5
software_defined_assembly
PISA
4
tetrameric
5670
-141
13050
B
DG
12
B
N7
DG
12
1_555
B
ZN
21
E
ZN
ZN
1_555
B
HOH
51
O
O
HOH
1_555
82.4
B
DT
17
B
OP2
DT
17
1_555
B
ZN
22
F
ZN
ZN
1_555
B
HOH
53
O
O
HOH
1_555
111.5
B
DT
17
B
OP2
DT
17
1_555
B
ZN
22
F
ZN
ZN
1_555
D
HOH
50
Q
O
HOH
1_555
118.8
B
HOH
53
O
O
HOH
1_555
B
ZN
22
F
ZN
ZN
1_555
D
HOH
50
Q
O
HOH
1_555
123.1
C
CYS
473
C
SG
CYS
7
1_555
C
ZN
968
H
ZN
ZN
1_555
C
CYS
476
C
SG
CYS
10
1_555
107.3
C
CYS
473
C
SG
CYS
7
1_555
C
ZN
968
H
ZN
ZN
1_555
C
HIS
489
C
NE2
HIS
23
1_555
110.9
C
CYS
476
C
SG
CYS
10
1_555
C
ZN
968
H
ZN
ZN
1_555
C
HIS
489
C
NE2
HIS
23
1_555
108.7
C
CYS
473
C
SG
CYS
7
1_555
C
ZN
968
H
ZN
ZN
1_555
C
HIS
493
C
NE2
HIS
27
1_555
106.9
C
CYS
476
C
SG
CYS
10
1_555
C
ZN
968
H
ZN
ZN
1_555
C
HIS
493
C
NE2
HIS
27
1_555
117.5
C
HIS
489
C
NE2
HIS
23
1_555
C
ZN
968
H
ZN
ZN
1_555
C
HIS
493
C
NE2
HIS
27
1_555
105.6
C
CYS
501
C
SG
CYS
35
1_555
C
ZN
967
G
ZN
ZN
1_555
C
CYS
504
C
SG
CYS
38
1_555
115.9
C
CYS
501
C
SG
CYS
35
1_555
C
ZN
967
G
ZN
ZN
1_555
C
HIS
517
C
NE2
HIS
51
1_555
110.8
C
CYS
504
C
SG
CYS
38
1_555
C
ZN
967
G
ZN
ZN
1_555
C
HIS
517
C
NE2
HIS
51
1_555
106.4
C
CYS
501
C
SG
CYS
35
1_555
C
ZN
967
G
ZN
ZN
1_555
C
HIS
522
C
NE2
HIS
56
1_555
97.6
C
CYS
504
C
SG
CYS
38
1_555
C
ZN
967
G
ZN
ZN
1_555
C
HIS
522
C
NE2
HIS
56
1_555
130.3
C
HIS
517
C
NE2
HIS
51
1_555
C
ZN
967
G
ZN
ZN
1_555
C
HIS
522
C
NE2
HIS
56
1_555
93.3
D
CYS
473
D
SG
CYS
7
1_555
D
ZN
968
L
ZN
ZN
1_555
D
CYS
476
D
SG
CYS
10
1_555
115.6
D
CYS
473
D
SG
CYS
7
1_555
D
ZN
968
L
ZN
ZN
1_555
D
HIS
489
D
NE2
HIS
23
1_555
112.5
D
CYS
476
D
SG
CYS
10
1_555
D
ZN
968
L
ZN
ZN
1_555
D
HIS
489
D
NE2
HIS
23
1_555
109.0
D
CYS
473
D
SG
CYS
7
1_555
D
ZN
968
L
ZN
ZN
1_555
D
HIS
493
D
NE2
HIS
27
1_555
100.5
D
CYS
476
D
SG
CYS
10
1_555
D
ZN
968
L
ZN
ZN
1_555
D
HIS
493
D
NE2
HIS
27
1_555
115.7
D
HIS
489
D
NE2
HIS
23
1_555
D
ZN
968
L
ZN
ZN
1_555
D
HIS
493
D
NE2
HIS
27
1_555
102.8
D
CYS
501
D
SG
CYS
35
1_555
D
ZN
967
K
ZN
ZN
1_555
D
CYS
504
D
SG
CYS
38
1_555
104.4
D
CYS
501
D
SG
CYS
35
1_555
D
ZN
967
K
ZN
ZN
1_555
D
HIS
517
D
NE2
HIS
51
1_555
112.6
D
CYS
504
D
SG
CYS
38
1_555
D
ZN
967
K
ZN
ZN
1_555
D
HIS
517
D
NE2
HIS
51
1_555
87.5
D
CYS
501
D
SG
CYS
35
1_555
D
ZN
967
K
ZN
ZN
1_555
D
HIS
522
D
NE2
HIS
56
1_555
112.9
D
CYS
504
D
SG
CYS
38
1_555
D
ZN
967
K
ZN
ZN
1_555
D
HIS
522
D
NE2
HIS
56
1_555
122.1
D
HIS
517
D
NE2
HIS
51
1_555
D
ZN
967
K
ZN
ZN
1_555
D
HIS
522
D
NE2
HIS
56
1_555
114.8
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
C
N
TYR
499
C
N
TYR
33
C
O
ALA
508
C
O
ALA
42
D
N
TYR
499
D
N
TYR
33
D
O
ALA
508
D
O
ALA
42
1
D
CG
LYS
523
D
CG
LYS
57
1
Y
1
D
CD
LYS
523
D
CD
LYS
57
1
Y
1
D
CE
LYS
523
D
CE
LYS
57
1
Y
1
D
NZ
LYS
523
D
NZ
LYS
57
1
Y
1
C
GLY
467
C
GLY
1
1
Y
1
C
SER
468
C
SER
2
1
Y
1
C
SER
469
C
SER
3
1
Y
1
C
SER
470
C
SER
4
1
Y
1
C
LYS
523
C
LYS
57
1
Y
1
D
GLY
467
D
GLY
1
1
Y
1
D
SER
468
D
SER
2
1
Y
1
D
SER
469
D
SER
3
1
Y
1
4.25
0.30
108.30
112.55
A
A
A
O4'
C1'
N9
DG
DG
DG
7
7
7
N
1
-4.86
0.70
108.00
103.14
A
A
A
O4'
C1'
N9
DG
DG
DG
12
12
12
N
1
3.69
0.30
108.30
111.99
A
A
A
O4'
C1'
N1
DT
DT
DT
14
14
14
N
1
2.01
0.30
108.30
110.31
A
A
A
O4'
C1'
N1
DC
DC
DC
19
19
19
N
1
3.50
0.30
108.30
111.80
B
B
B
O4'
C1'
N9
DG
DG
DG
7
7
7
N
1
-6.16
0.70
108.00
101.84
B
B
B
O4'
C1'
N1
DC
DC
DC
16
16
16
N
1
2.46
0.30
108.30
110.76
B
B
B
O4'
C1'
N9
DA
DA
DA
20
20
20
N
110.150
52.0382
2.000
-3.5800
0.0000
0.4000
1.3300
0.0000
2.3400
0.9580
0.9410
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.2558
0.2236
0.2253
2.1000
15.000
769
15288
5.0000
98.3300
0.2676
0.2417
1.000
0.500
0.7771
15.0020
0.1740
0.2375
0.1931
RANDOM
1
THROUGHOUT
0.000
MOLECULAR REPLACEMENT
0.1930
MAXIMUM LIKELIHOOD
MASK
2.1000
15.000
57
1789
9
814
909
0.006
0.021
1858
0.001
0.020
1041
1.183
2.482
2673
0.910
3.000
2534
4.242
5.000
106
28.896
21.091
55
14.019
15.000
160
10.504
15.000
10
0.049
0.200
277
0.004
0.020
1475
0.001
0.020
323
1.042
2.000
529
0.264
2.000
213
1.910
3.000
843
3.015
4.000
1329
4.277
6.000
1829
0.5380
0.4280
2.1530
60
970
1030
20
89.0200
2.100
61.840
3UK3
15360
15360
0
0
0.086
1.030
1
13.800
8.000
99.900
0.898
2.100
2.140
768
1.057
1
7.900
100.000
0.788
2.140
2.170
776
1.048
1
7.900
100.000
0.703
2.170
2.220
735
1.070
1
7.900
100.000
0.665
2.220
2.260
798
1.058
1
7.900
100.000
0.595
2.260
2.310
732
1.051
1
8.000
100.000
0.529
2.310
2.360
774
1.021
1
7.900
100.000
0.467
2.360
2.420
756
1.097
1
8.000
100.000
0.402
2.420
2.490
744
1.042
1
7.900
100.000
0.320
2.490
2.560
779
1.079
1
8.100
100.000
0.270
2.560
2.640
768
1.025
1
8.000
100.000
0.208
2.640
2.740
773
1.021
1
8.100
100.000
0.196
2.740
2.850
741
0.980
1
8.100
100.000
0.170
2.850
2.970
775
0.959
1
8.100
100.000
0.134
2.970
3.130
779
1.027
1
8.200
100.000
0.084
3.130
3.320
744
1.028
1
8.000
99.100
0.084
3.320
3.580
765
0.944
1
8.100
100.000
0.070
3.580
3.930
779
0.958
1
8.200
100.000
0.061
3.930
4.490
779
1.050
1
8.200
100.000
0.056
4.490
5.600
788
1.088
1
8.200
99.900
0.061
5.600
15.000
807
1.011
1
8.000
100.000
data reduction
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
DENZO
program
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
program
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
Wed Jun 24 14:00:05 2009
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
2.1.4
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
data extraction
PDB
deposit@deposit.rcsb.org
June 10, 2010
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.10
data collection
MAR345dtb
Crystal structure of ZNF217 bound to DNA
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
5
N
N
4
N
N
4
N
N
4
N
N
6
N
N
6
N
N
6
N
N
6
N
N
C
SER
482
C
SER
16
HELX_P
C
GLY
495
C
GLY
29
1
1
14
C
GLN
510
C
GLN
44
HELX_P
C
HIS
522
C
HIS
56
1
2
13
D
SER
482
D
SER
16
HELX_P
D
GLY
495
D
GLY
29
1
3
14
D
GLN
510
D
GLN
44
HELX_P
D
HIS
522
D
HIS
56
1
4
13
metalc
2.486
B
DG
12
B
N7
DG
12
1_555
B
ZN
21
E
ZN
ZN
1_555
metalc
2.246
B
DT
17
B
OP2
DT
17
1_555
B
ZN
22
F
ZN
ZN
1_555
metalc
2.463
B
ZN
21
E
ZN
ZN
1_555
B
HOH
51
O
O
HOH
1_555
metalc
2.618
B
ZN
22
F
ZN
ZN
1_555
B
HOH
53
O
O
HOH
1_555
metalc
2.253
B
ZN
22
F
ZN
ZN
1_555
D
HOH
50
Q
O
HOH
1_555
metalc
2.078
C
ZN
1
I
ZN
ZN
1_555
C
HIS
521
C
NE2
HIS
55
1_555
metalc
2.468
C
CYS
473
C
SG
CYS
7
1_555
C
ZN
968
H
ZN
ZN
1_555
metalc
2.244
C
CYS
476
C
SG
CYS
10
1_555
C
ZN
968
H
ZN
ZN
1_555
metalc
2.012
C
HIS
489
C
NE2
HIS
23
1_555
C
ZN
968
H
ZN
ZN
1_555
metalc
2.118
C
HIS
493
C
NE2
HIS
27
1_555
C
ZN
968
H
ZN
ZN
1_555
metalc
2.360
C
CYS
501
C
SG
CYS
35
1_555
C
ZN
967
G
ZN
ZN
1_555
metalc
2.095
C
CYS
504
C
SG
CYS
38
1_555
C
ZN
967
G
ZN
ZN
1_555
metalc
2.087
C
HIS
517
C
NE2
HIS
51
1_555
C
ZN
967
G
ZN
ZN
1_555
metalc
2.173
C
HIS
522
C
NE2
HIS
56
1_555
C
ZN
967
G
ZN
ZN
1_555
metalc
2.222
D
CYS
473
D
SG
CYS
7
1_555
D
ZN
968
L
ZN
ZN
1_555
metalc
2.216
D
CYS
476
D
SG
CYS
10
1_555
D
ZN
968
L
ZN
ZN
1_555
metalc
2.050
D
HIS
489
D
NE2
HIS
23
1_555
D
ZN
968
L
ZN
ZN
1_555
metalc
2.049
D
HIS
493
D
NE2
HIS
27
1_555
D
ZN
968
L
ZN
ZN
1_555
metalc
2.206
D
CYS
501
D
SG
CYS
35
1_555
D
ZN
967
K
ZN
ZN
1_555
metalc
2.285
D
CYS
504
D
SG
CYS
38
1_555
D
ZN
967
K
ZN
ZN
1_555
metalc
2.426
D
HIS
517
D
NE2
HIS
51
1_555
D
ZN
967
K
ZN
ZN
1_555
metalc
2.010
D
HIS
522
D
NE2
HIS
56
1_555
D
ZN
967
K
ZN
ZN
1_555
hydrog
WATSON-CRICK
A
DT
3
A
N3
DT
3
1_555
B
DA
20
B
N1
DA
20
1_555
hydrog
WATSON-CRICK
A
DT
3
A
O4
DT
3
1_555
B
DA
20
B
N6
DA
20
1_555
hydrog
WATSON-CRICK
A
DG
4
A
N1
DG
4
1_555
B
DC
19
B
N3
DC
19
1_555
hydrog
WATSON-CRICK
A
DG
4
A
N2
DG
4
1_555
B
DC
19
B
O2
DC
19
1_555
hydrog
WATSON-CRICK
A
DG
4
A
O6
DG
4
1_555
B
DC
19
B
N4
DC
19
1_555
hydrog
WATSON-CRICK
A
DC
5
A
N3
DC
5
1_555
B
DG
18
B
N1
DG
18
1_555
hydrog
WATSON-CRICK
A
DC
5
A
N4
DC
5
1_555
B
DG
18
B
O6
DG
18
1_555
hydrog
WATSON-CRICK
A
DC
5
A
O2
DC
5
1_555
B
DG
18
B
N2
DG
18
1_555
hydrog
WATSON-CRICK
A
DA
6
A
N1
DA
6
1_555
B
DT
17
B
N3
DT
17
1_555
hydrog
WATSON-CRICK
A
DA
6
A
N6
DA
6
1_555
B
DT
17
B
O4
DT
17
1_555
hydrog
WATSON-CRICK
A
DG
7
A
N1
DG
7
1_555
B
DC
16
B
N3
DC
16
1_555
hydrog
WATSON-CRICK
A
DG
7
A
N2
DG
7
1_555
B
DC
16
B
O2
DC
16
1_555
hydrog
WATSON-CRICK
A
DG
7
A
O6
DG
7
1_555
B
DC
16
B
N4
DC
16
1_555
hydrog
WATSON-CRICK
A
DA
8
A
N1
DA
8
1_555
B
DT
15
B
N3
DT
15
1_555
hydrog
WATSON-CRICK
A
DA
8
A
N6
DA
8
1_555
B
DT
15
B
O4
DT
15
1_555
hydrog
WATSON-CRICK
A
DA
9
A
N1
DA
9
1_555
B
DT
14
B
N3
DT
14
1_555
hydrog
WATSON-CRICK
A
DA
9
A
N6
DA
9
1_555
B
DT
14
B
O4
DT
14
1_555
hydrog
WATSON-CRICK
A
DT
10
A
N3
DT
10
1_555
B
DA
13
B
N1
DA
13
1_555
hydrog
WATSON-CRICK
A
DT
10
A
O4
DT
10
1_555
B
DA
13
B
N6
DA
13
1_555
hydrog
WATSON-CRICK
A
DC
11
A
N3
DC
11
1_555
B
DG
12
B
N1
DG
12
1_555
hydrog
WATSON-CRICK
A
DC
11
A
N4
DC
11
1_555
B
DG
12
B
O6
DG
12
1_555
hydrog
WATSON-CRICK
A
DC
11
A
O2
DC
11
1_555
B
DG
12
B
N2
DG
12
1_555
hydrog
WATSON-CRICK
A
DG
12
A
N1
DG
12
1_555
B
DC
11
B
N3
DC
11
1_555
hydrog
WATSON-CRICK
A
DG
12
A
N2
DG
12
1_555
B
DC
11
B
O2
DC
11
1_555
hydrog
WATSON-CRICK
A
DG
12
A
O6
DG
12
1_555
B
DC
11
B
N4
DC
11
1_555
hydrog
WATSON-CRICK
A
DA
13
A
N1
DA
13
1_555
B
DT
10
B
N3
DT
10
1_555
hydrog
WATSON-CRICK
A
DA
13
A
N6
DA
13
1_555
B
DT
10
B
O4
DT
10
1_555
hydrog
WATSON-CRICK
A
DT
14
A
N3
DT
14
1_555
B
DA
9
B
N1
DA
9
1_555
hydrog
WATSON-CRICK
A
DT
14
A
O4
DT
14
1_555
B
DA
9
B
N6
DA
9
1_555
hydrog
WATSON-CRICK
A
DT
15
A
N3
DT
15
1_555
B
DA
8
B
N1
DA
8
1_555
hydrog
WATSON-CRICK
A
DT
15
A
O4
DT
15
1_555
B
DA
8
B
N6
DA
8
1_555
hydrog
WATSON-CRICK
A
DC
16
A
N3
DC
16
1_555
B
DG
7
B
N1
DG
7
1_555
hydrog
WATSON-CRICK
A
DC
16
A
N4
DC
16
1_555
B
DG
7
B
O6
DG
7
1_555
hydrog
WATSON-CRICK
A
DC
16
A
O2
DC
16
1_555
B
DG
7
B
N2
DG
7
1_555
hydrog
WATSON-CRICK
A
DT
17
A
N3
DT
17
1_555
B
DA
6
B
N1
DA
6
1_555
hydrog
WATSON-CRICK
A
DT
17
A
O4
DT
17
1_555
B
DA
6
B
N6
DA
6
1_555
hydrog
WATSON-CRICK
A
DG
18
A
N1
DG
18
1_555
B
DC
5
B
N3
DC
5
1_555
hydrog
WATSON-CRICK
A
DG
18
A
N2
DG
18
1_555
B
DC
5
B
O2
DC
5
1_555
hydrog
WATSON-CRICK
A
DG
18
A
O6
DG
18
1_555
B
DC
5
B
N4
DC
5
1_555
hydrog
WATSON-CRICK
A
DC
19
A
N3
DC
19
1_555
B
DG
4
B
N1
DG
4
1_555
hydrog
WATSON-CRICK
A
DC
19
A
N4
DC
19
1_555
B
DG
4
B
O6
DG
4
1_555
hydrog
WATSON-CRICK
A
DC
19
A
O2
DC
19
1_555
B
DG
4
B
N2
DG
4
1_555
hydrog
WATSON-CRICK
A
DA
20
A
N1
DA
20
1_555
B
DT
3
B
N3
DT
3
1_555
hydrog
WATSON-CRICK
A
DA
20
A
N6
DA
20
1_555
B
DT
3
B
O4
DT
3
1_555
DNA/METAL BINDING PROTEIN
Zinc Finger, Transcription factor, DNA binding, DNA-METAL BINDING PROTEIN complex
ZN217_HUMAN
UNP
3
469
O75362
SSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK
3UK3
PDB
1
3UK3
3UK3
PDB
2
3UK3
469
523
3UK3
469
523
O75362
C
1
3
57
469
523
3UK3
469
523
O75362
D
1
3
57
1
20
3UK3
1
20
3UK3
A
2
1
20
1
20
3UK3
1
20
3UK3
B
3
1
20
1
expression tag
GLY
467
3UK3
C
O75362
UNP
1
1
expression tag
SER
468
3UK3
C
O75362
UNP
2
2
expression tag
GLY
467
3UK3
D
O75362
UNP
1
2
expression tag
SER
468
3UK3
D
O75362
UNP
2
2
2
anti-parallel
anti-parallel
C
TYR
499
C
TYR
33
C
LYS
500
C
LYS
34
C
ALA
507
C
ALA
41
C
ALA
508
C
ALA
42
D
TYR
499
D
TYR
33
D
LYS
500
D
LYS
34
D
ALA
507
D
ALA
41
D
ALA
508
D
ALA
42
BINDING SITE FOR RESIDUE ZN C 967
C
ZN
967
Software
4
BINDING SITE FOR RESIDUE ZN C 968
C
ZN
968
Software
4
BINDING SITE FOR RESIDUE ZN D 967
D
ZN
967
Software
4
BINDING SITE FOR RESIDUE ZN D 968
D
ZN
968
Software
4
BINDING SITE FOR RESIDUE ZN C 1
C
ZN
1
Software
2
BINDING SITE FOR RESIDUE ZN B 21
B
ZN
21
Software
2
BINDING SITE FOR RESIDUE ZN D 1
D
ZN
1
Software
4
BINDING SITE FOR RESIDUE ZN B 22
B
ZN
22
Software
3
C
CYS
501
C
CYS
35
4
1_555
C
CYS
504
C
CYS
38
4
1_555
C
HIS
517
C
HIS
51
4
1_555
C
HIS
522
C
HIS
56
4
1_555
C
CYS
473
C
CYS
7
4
1_555
C
CYS
476
C
CYS
10
4
1_555
C
HIS
489
C
HIS
23
4
1_555
C
HIS
493
C
HIS
27
4
1_555
D
CYS
501
D
CYS
35
4
1_555
D
CYS
504
D
CYS
38
4
1_555
D
HIS
517
D
HIS
51
4
1_555
D
HIS
522
D
HIS
56
4
1_555
D
CYS
473
D
CYS
7
4
1_555
D
CYS
476
D
CYS
10
4
1_555
D
HIS
489
D
HIS
23
4
1_555
D
HIS
493
D
HIS
27
4
1_555
A
DA
13
A
DA
13
2
1_555
C
HIS
521
C
HIS
55
2
1_555
B
DG
12
B
DG
12
2
1_555
B
HOH
51
O
HOH
2
1_555
C
GLU
502
C
GLU
36
4
4_556
D
GLU
472
D
GLU
6
4
1_565
D
GLY
477
D
GLY
11
4
1_565
D
HIS
521
D
HIS
55
4
1_555
B
DT
17
B
DT
17
3
1_555
B
HOH
53
O
HOH
3
1_555
D
HOH
50
Q
HOH
3
1_555
5
C 1 2 1